####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 75 ( 300), selected 75 , name R1082TS294_1 # Molecule2: number of CA atoms 75 ( 605), selected 75 , name R1082.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R1082TS294_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 75 23 - 97 2.90 2.90 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 30 - 96 2.00 3.06 LCS_AVERAGE: 85.39 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 41 - 68 0.99 3.75 LONGEST_CONTINUOUS_SEGMENT: 28 42 - 69 1.00 3.75 LCS_AVERAGE: 25.90 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 75 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 23 G 23 3 22 75 3 3 3 3 8 11 16 22 28 39 45 53 60 69 70 75 75 75 75 75 LCS_GDT Y 24 Y 24 14 29 75 5 11 15 27 35 54 62 66 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT D 25 D 25 14 30 75 6 11 17 28 33 41 60 62 68 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT K 26 K 26 14 46 75 9 12 19 27 33 46 56 62 68 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT D 27 D 27 14 50 75 9 12 18 27 33 41 56 62 68 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT L 28 L 28 16 63 75 9 12 19 28 36 54 63 66 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT C 29 C 29 19 65 75 9 13 20 43 52 60 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT E 30 E 30 20 67 75 9 12 20 36 49 60 64 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT W 31 W 31 24 67 75 9 12 20 43 52 60 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT S 32 S 32 25 67 75 9 17 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT M 33 M 33 25 67 75 9 22 38 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT T 34 T 34 25 67 75 9 22 38 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT A 35 A 35 25 67 75 12 26 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT D 36 D 36 25 67 75 12 27 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT Q 37 Q 37 25 67 75 11 26 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT T 38 T 38 25 67 75 12 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT E 39 E 39 25 67 75 12 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT V 40 V 40 25 67 75 12 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT E 41 E 41 28 67 75 12 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT T 42 T 42 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT Q 43 Q 43 28 67 75 12 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT I 44 I 44 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT E 45 E 45 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT A 46 A 46 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT D 47 D 47 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT I 48 I 48 28 67 75 13 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT M 49 M 49 28 67 75 12 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT N 50 N 50 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT I 51 I 51 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT V 52 V 52 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT K 53 K 53 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT R 54 R 54 28 67 75 13 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT D 55 D 55 28 67 75 3 23 36 45 52 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT R 56 R 56 28 67 75 4 7 30 43 52 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT P 57 P 57 28 67 75 4 4 7 42 51 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT E 58 E 58 28 67 75 4 4 19 43 52 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT M 59 M 59 28 67 75 8 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT K 60 K 60 28 67 75 11 25 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT A 61 A 61 28 67 75 11 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT E 62 E 62 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT V 63 V 63 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT Q 64 Q 64 28 67 75 14 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT K 65 K 65 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT Q 66 Q 66 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT L 67 L 67 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT K 68 K 68 28 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT S 69 S 69 28 67 75 11 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT G 70 G 70 15 67 75 11 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT G 71 G 71 15 67 75 6 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT V 72 V 72 15 67 75 5 11 25 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT M 73 M 73 6 67 75 5 11 20 40 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT Q 74 Q 74 6 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT Y 75 Y 75 6 67 75 7 15 38 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT N 76 N 76 6 67 75 5 6 7 11 15 44 64 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT Y 77 Y 77 6 67 75 4 5 8 35 42 59 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT V 78 V 78 6 67 75 4 5 28 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT L 79 L 79 12 67 75 4 15 28 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT Y 80 Y 80 12 67 75 5 28 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT C 81 C 81 12 67 75 6 27 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT D 82 D 82 12 67 75 6 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT K 83 K 83 12 67 75 6 18 38 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT N 84 N 84 12 67 75 6 9 34 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT F 85 F 85 12 67 75 6 23 38 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT N 86 N 86 12 67 75 6 23 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT N 87 N 87 12 67 75 8 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT K 88 K 88 12 67 75 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT N 89 N 89 12 67 75 8 13 25 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT I 90 I 90 12 67 75 8 9 20 28 43 60 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT I 91 I 91 9 67 75 8 8 8 28 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT A 92 A 92 9 67 75 8 13 27 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT E 93 E 93 9 67 75 8 10 25 37 52 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT V 94 V 94 9 67 75 8 8 22 37 52 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT V 95 V 95 9 67 75 8 9 26 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT G 96 G 96 9 67 75 8 8 26 45 52 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 LCS_GDT E 97 E 97 3 9 75 3 3 3 5 16 18 25 34 38 46 50 63 73 74 74 75 75 75 75 75 LCS_AVERAGE LCS_A: 70.43 ( 25.90 85.39 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 30 39 45 53 62 66 67 70 73 73 73 73 74 74 75 75 75 75 75 GDT PERCENT_AT 20.00 40.00 52.00 60.00 70.67 82.67 88.00 89.33 93.33 97.33 97.33 97.33 97.33 98.67 98.67 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.37 0.64 0.89 1.12 1.45 1.75 1.92 1.97 2.18 2.48 2.48 2.48 2.48 2.70 2.70 2.90 2.90 2.90 2.90 2.90 GDT RMS_ALL_AT 3.54 3.42 3.24 3.23 3.09 3.15 3.06 3.07 2.97 2.92 2.92 2.92 2.92 2.90 2.90 2.90 2.90 2.90 2.90 2.90 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA G 23 G 23 10.278 1 0.006 0.006 10.535 0.000 0.000 - LGA Y 24 Y 24 5.330 8 0.042 0.040 7.214 0.000 0.909 - LGA D 25 D 25 7.083 4 0.025 0.031 7.678 0.000 0.000 - LGA K 26 K 26 7.528 5 0.013 0.022 8.946 0.000 0.000 - LGA D 27 D 27 7.439 4 0.008 0.016 8.211 0.000 0.000 - LGA L 28 L 28 5.398 4 0.019 0.018 6.268 1.364 0.682 - LGA C 29 C 29 3.937 2 0.010 0.037 4.628 5.909 4.242 - LGA E 30 E 30 4.779 5 0.013 0.014 5.820 2.273 1.010 - LGA W 31 W 31 3.547 10 0.011 0.016 4.300 13.636 4.286 - LGA S 32 S 32 1.359 2 0.009 0.014 2.241 46.364 41.818 - LGA M 33 M 33 2.156 4 0.014 0.015 2.983 31.818 19.318 - LGA T 34 T 34 2.230 3 0.022 0.023 2.682 31.818 22.078 - LGA A 35 A 35 0.846 1 0.014 0.025 1.250 57.273 58.909 - LGA D 36 D 36 0.545 4 0.011 0.020 0.726 65.909 45.455 - LGA Q 37 Q 37 1.143 5 0.010 0.012 1.277 53.182 30.909 - LGA T 38 T 38 1.354 3 0.006 0.014 1.603 49.091 35.325 - LGA E 39 E 39 1.030 5 0.014 0.021 1.104 53.182 30.909 - LGA V 40 V 40 0.418 3 0.008 0.013 0.655 65.909 49.351 - LGA E 41 E 41 1.072 5 0.011 0.011 1.362 53.182 30.909 - LGA T 42 T 42 1.430 3 0.009 0.019 1.576 49.091 35.325 - LGA Q 43 Q 43 1.057 5 0.009 0.012 1.102 53.182 30.909 - LGA I 44 I 44 0.715 4 0.017 0.023 0.805 61.364 40.909 - LGA E 45 E 45 1.085 5 0.009 0.014 1.359 53.182 30.909 - LGA A 46 A 46 1.073 1 0.010 0.017 1.297 53.182 55.636 - LGA D 47 D 47 0.741 4 0.012 0.014 0.848 61.364 40.909 - LGA I 48 I 48 0.750 4 0.006 0.013 0.991 61.364 40.909 - LGA M 49 M 49 1.002 4 0.017 0.015 1.339 57.273 36.818 - LGA N 50 N 50 0.747 4 0.013 0.016 0.877 61.364 40.909 - LGA I 51 I 51 0.558 4 0.019 0.027 0.665 61.364 40.909 - LGA V 52 V 52 0.561 3 0.007 0.026 0.828 61.364 46.753 - LGA K 53 K 53 0.807 5 0.018 0.025 0.946 61.364 36.364 - LGA R 54 R 54 1.452 7 0.039 0.039 1.560 45.455 21.157 - LGA D 55 D 55 2.612 4 0.061 0.057 3.276 23.182 13.864 - LGA R 56 R 56 2.911 7 0.010 0.022 3.317 23.182 10.083 - LGA P 57 P 57 3.186 3 0.013 0.018 4.109 13.636 8.571 - LGA E 58 E 58 3.145 5 0.013 0.015 3.343 18.636 10.303 - LGA M 59 M 59 1.208 4 0.015 0.014 1.825 45.455 32.955 - LGA K 60 K 60 1.287 5 0.011 0.013 1.646 49.091 27.475 - LGA A 61 A 61 0.827 1 0.010 0.018 0.935 61.364 65.455 - LGA E 62 E 62 0.897 5 0.011 0.017 0.998 61.364 36.364 - LGA V 63 V 63 0.867 3 0.014 0.021 0.914 61.364 46.753 - LGA Q 64 Q 64 0.897 5 0.026 0.027 1.110 57.273 32.727 - LGA K 65 K 65 1.425 5 0.012 0.014 1.527 45.455 27.475 - LGA Q 66 Q 66 1.487 5 0.016 0.017 1.487 49.091 29.091 - LGA L 67 L 67 1.208 4 0.011 0.013 1.372 49.091 34.773 - LGA K 68 K 68 1.817 5 0.010 0.012 2.385 38.636 21.414 - LGA S 69 S 69 2.414 2 0.036 0.038 2.678 28.636 23.636 - LGA G 70 G 70 2.308 1 0.048 0.048 2.583 25.909 25.909 - LGA G 71 G 71 1.244 1 0.026 0.026 1.419 49.091 49.091 - LGA V 72 V 72 1.971 3 0.009 0.027 3.592 41.818 25.455 - LGA M 73 M 73 2.523 4 0.013 0.012 3.250 29.091 16.818 - LGA Q 74 Q 74 1.601 5 0.009 0.015 2.476 49.545 26.263 - LGA Y 75 Y 75 1.794 8 0.020 0.033 2.955 42.727 16.515 - LGA N 76 N 76 4.020 4 0.019 0.021 6.230 12.727 6.364 - LGA Y 77 Y 77 3.282 8 0.024 0.031 4.558 20.909 7.121 - LGA V 78 V 78 2.575 3 0.017 0.063 2.820 25.909 18.701 - LGA L 79 L 79 2.464 4 0.031 0.032 2.699 31.818 19.318 - LGA Y 80 Y 80 1.346 8 0.033 0.033 1.435 49.091 21.818 - LGA C 81 C 81 1.399 2 0.040 0.036 1.771 49.091 41.212 - LGA D 82 D 82 0.435 4 0.042 0.044 0.977 65.909 43.182 - LGA K 83 K 83 1.548 5 0.029 0.031 2.065 45.909 24.646 - LGA N 84 N 84 2.403 4 0.026 0.030 2.623 31.818 19.318 - LGA F 85 F 85 1.594 7 0.010 0.010 1.726 41.818 21.157 - LGA N 86 N 86 1.330 4 0.010 0.022 1.690 53.182 32.955 - LGA N 87 N 87 0.540 4 0.014 0.026 1.307 65.909 41.136 - LGA K 88 K 88 0.835 5 0.016 0.015 1.293 61.818 36.566 - LGA N 89 N 89 2.411 4 0.017 0.029 2.761 29.091 17.955 - LGA I 90 I 90 3.482 4 0.010 0.012 4.052 13.636 7.500 - LGA I 91 I 91 3.034 4 0.011 0.029 3.417 15.909 10.227 - LGA A 92 A 92 2.412 1 0.009 0.019 2.567 28.636 28.364 - LGA E 93 E 93 2.922 5 0.023 0.021 3.373 18.182 10.101 - LGA V 94 V 94 3.068 3 0.009 0.032 3.457 18.182 12.987 - LGA V 95 V 95 2.461 3 0.027 0.032 2.752 28.636 20.260 - LGA G 96 G 96 2.942 1 0.017 0.017 5.636 13.636 13.636 - LGA E 97 E 97 9.889 6 0.010 0.017 11.667 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 75 300 225 75.00 605 296 48.93 75 0 SUMMARY(RMSD_GDC): 2.900 2.829 2.915 38.097 25.467 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 75 75 4.0 67 1.97 72.333 80.200 3.236 LGA_LOCAL RMSD: 1.970 Number of atoms: 67 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.068 Number of assigned atoms: 75 Std_ASGN_ATOMS RMSD: 2.900 Standard rmsd on all 75 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.012859 * X + -0.232961 * Y + 0.972401 * Z + -4.487364 Y_new = 0.679776 * X + -0.715223 * Y + -0.162359 * Z + 3.439219 Z_new = 0.733307 * X + 0.658927 * Y + 0.167559 * Z + 21.779802 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.589711 -0.823173 1.321784 [DEG: 91.0837 -47.1643 75.7326 ] ZXZ: 1.405355 1.402444 0.838772 [DEG: 80.5209 80.3541 48.0581 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R1082TS294_1 REMARK 2: R1082.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R1082TS294_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 75 75 4.0 67 1.97 80.200 2.90 REMARK ---------------------------------------------------------- MOLECULE R1082TS294_1 PFRMAT TS TARGET R1082 MODEL 1 PARENT N/A ATOM 1 N GLY 23 16.024 0.792 43.908 0.00 1.00 ATOM 2 CA GLY 23 17.144 1.508 44.481 0.00 1.00 ATOM 3 C GLY 23 17.068 2.994 44.287 0.00 1.00 ATOM 4 CB GLY 23 18.029 1.149 43.974 0.00 1.00 ATOM 5 N TYR 24 15.900 3.517 43.909 0.00 1.00 ATOM 6 CA TYR 24 15.701 4.930 43.689 0.00 1.00 ATOM 7 C TYR 24 15.160 5.467 44.988 0.00 1.00 ATOM 8 CB TYR 24 14.681 5.154 42.542 0.00 1.00 ATOM 9 N ASP 25 15.509 6.714 45.308 0.00 1.00 ATOM 10 CA ASP 25 15.091 7.387 46.515 0.00 1.00 ATOM 11 C ASP 25 13.584 7.557 46.526 0.00 1.00 ATOM 12 CB ASP 25 15.832 8.751 46.618 0.00 1.00 ATOM 13 N LYS 26 12.940 7.089 47.598 0.00 1.00 ATOM 14 CA LYS 26 11.516 7.183 47.822 0.00 1.00 ATOM 15 C LYS 26 11.039 8.609 47.863 0.00 1.00 ATOM 16 CB LYS 26 11.134 6.510 49.161 0.00 1.00 ATOM 17 N ASP 27 11.841 9.496 48.458 0.00 1.00 ATOM 18 CA ASP 27 11.545 10.908 48.580 0.00 1.00 ATOM 19 C ASP 27 11.397 11.586 47.236 0.00 1.00 ATOM 20 CB ASP 27 12.663 11.630 49.387 0.00 1.00 ATOM 21 N LEU 28 12.279 11.253 46.287 0.00 1.00 ATOM 22 CA LEU 28 12.205 11.720 44.917 0.00 1.00 ATOM 23 C LEU 28 10.980 11.229 44.171 0.00 1.00 ATOM 24 CB LEU 28 13.491 11.341 44.148 0.00 1.00 ATOM 25 N CYS 29 10.597 9.962 44.375 0.00 1.00 ATOM 26 CA CYS 29 9.391 9.383 43.798 0.00 1.00 ATOM 27 C CYS 29 8.137 10.075 44.271 0.00 1.00 ATOM 28 CB CYS 29 9.252 7.891 44.209 0.00 1.00 ATOM 29 N GLU 30 8.050 10.313 45.579 0.00 1.00 ATOM 30 CA GLU 30 6.966 11.016 46.221 0.00 1.00 ATOM 31 C GLU 30 6.882 12.459 45.809 0.00 1.00 ATOM 32 CB GLU 30 7.078 10.880 47.758 0.00 1.00 ATOM 33 N TRP 31 8.032 13.131 45.707 0.00 1.00 ATOM 34 CA TRP 31 8.140 14.503 45.254 0.00 1.00 ATOM 35 C TRP 31 7.653 14.685 43.836 0.00 1.00 ATOM 36 CB TRP 31 9.609 15.004 45.416 0.00 1.00 ATOM 37 N SER 32 8.034 13.768 42.941 0.00 1.00 ATOM 38 CA SER 32 7.628 13.777 41.550 0.00 1.00 ATOM 39 C SER 32 6.135 13.606 41.391 0.00 1.00 ATOM 40 CB SER 32 8.354 12.654 40.767 0.00 1.00 ATOM 41 N MET 33 5.552 12.675 42.149 0.00 1.00 ATOM 42 CA MET 33 4.128 12.422 42.185 0.00 1.00 ATOM 43 C MET 33 3.323 13.573 42.746 0.00 1.00 ATOM 44 CB MET 33 3.857 11.153 43.037 0.00 1.00 ATOM 45 N THR 34 3.782 14.118 43.876 0.00 1.00 ATOM 46 CA THR 34 3.132 15.164 44.644 0.00 1.00 ATOM 47 C THR 34 3.147 16.490 43.935 0.00 1.00 ATOM 48 CB THR 34 3.735 15.307 46.043 0.00 1.00 ATOM 49 N ALA 35 4.248 16.791 43.237 0.00 1.00 ATOM 50 CA ALA 35 4.436 18.000 42.460 0.00 1.00 ATOM 51 C ALA 35 3.361 18.115 41.415 0.00 1.00 ATOM 52 CB ALA 35 5.814 18.061 41.773 0.00 1.00 ATOM 53 N ASP 36 2.933 19.349 41.127 0.00 1.00 ATOM 54 CA ASP 36 1.757 19.638 40.330 0.00 1.00 ATOM 55 C ASP 36 1.842 18.981 38.978 0.00 1.00 ATOM 56 CB ASP 36 1.580 21.170 40.139 0.00 1.00 ATOM 57 N GLN 37 0.727 18.407 38.526 0.00 1.00 ATOM 58 CA GLN 37 0.664 17.545 37.367 0.00 1.00 ATOM 59 C GLN 37 1.092 18.243 36.100 0.00 1.00 ATOM 60 CB GLN 37 -0.765 16.970 37.206 0.00 1.00 ATOM 61 N THR 38 0.776 19.538 35.993 0.00 1.00 ATOM 62 CA THR 38 1.206 20.401 34.912 0.00 1.00 ATOM 63 C THR 38 2.716 20.528 34.833 0.00 1.00 ATOM 64 CB THR 38 0.576 21.788 35.013 0.00 1.00 ATOM 65 N GLU 39 3.378 20.738 35.977 0.00 1.00 ATOM 66 CA GLU 39 4.822 20.828 36.070 0.00 1.00 ATOM 67 C GLU 39 5.515 19.544 35.692 0.00 1.00 ATOM 68 CB GLU 39 5.250 21.214 37.509 0.00 1.00 ATOM 69 N VAL 40 5.017 18.420 36.212 0.00 1.00 ATOM 70 CA VAL 40 5.513 17.081 35.965 0.00 1.00 ATOM 71 C VAL 40 5.383 16.710 34.508 0.00 1.00 ATOM 72 CB VAL 40 4.787 16.074 36.855 0.00 1.00 ATOM 73 N GLU 41 4.229 17.018 33.909 0.00 1.00 ATOM 74 CA GLU 41 3.946 16.797 32.510 0.00 1.00 ATOM 75 C GLU 41 4.859 17.581 31.599 0.00 1.00 ATOM 76 CB GLU 41 2.471 17.153 32.207 0.00 1.00 ATOM 77 N THR 42 5.110 18.850 31.940 0.00 1.00 ATOM 78 CA THR 42 5.991 19.750 31.216 0.00 1.00 ATOM 79 C THR 42 7.427 19.275 31.217 0.00 1.00 ATOM 80 CB THR 42 5.912 21.181 31.740 0.00 1.00 ATOM 81 N GLN 43 7.919 18.837 32.380 0.00 1.00 ATOM 82 CA GLN 43 9.247 18.281 32.553 0.00 1.00 ATOM 83 C GLN 43 9.457 17.029 31.749 0.00 1.00 ATOM 84 CB GLN 43 9.503 17.977 34.053 0.00 1.00 ATOM 85 N ILE 44 8.475 16.129 31.793 0.00 1.00 ATOM 86 CA ILE 44 8.446 14.898 31.042 0.00 1.00 ATOM 87 C ILE 44 8.401 15.128 29.554 0.00 1.00 ATOM 88 CB ILE 44 7.340 13.981 31.534 0.00 1.00 ATOM 89 N GLU 45 7.565 16.064 29.097 0.00 1.00 ATOM 90 CA GLU 45 7.468 16.430 27.701 0.00 1.00 ATOM 91 C GLU 45 8.772 16.957 27.163 0.00 1.00 ATOM 92 CB GLU 45 6.343 17.479 27.483 0.00 1.00 ATOM 93 N ALA 46 9.442 17.810 27.940 0.00 1.00 ATOM 94 CA ALA 46 10.737 18.357 27.614 0.00 1.00 ATOM 95 C ALA 46 11.800 17.291 27.479 0.00 1.00 ATOM 96 CB ALA 46 11.197 19.384 28.666 0.00 1.00 ATOM 97 N ASP 47 11.830 16.339 28.418 0.00 1.00 ATOM 98 CA ASP 47 12.742 15.214 28.414 0.00 1.00 ATOM 99 C ASP 47 12.545 14.297 27.229 0.00 1.00 ATOM 100 CB ASP 47 12.587 14.392 29.721 0.00 1.00 ATOM 101 N ILE 48 11.288 13.979 26.906 0.00 1.00 ATOM 102 CA ILE 48 10.903 13.171 25.762 0.00 1.00 ATOM 103 C ILE 48 11.324 13.826 24.465 0.00 1.00 ATOM 104 CB ILE 48 9.401 12.865 25.758 0.00 1.00 ATOM 105 N MET 49 11.099 15.137 24.344 0.00 1.00 ATOM 106 CA MET 49 11.500 15.916 23.196 0.00 1.00 ATOM 107 C MET 49 12.989 15.922 22.958 0.00 1.00 ATOM 108 CB MET 49 10.963 17.365 23.307 0.00 1.00 ATOM 109 N ASN 50 13.776 16.059 24.028 0.00 1.00 ATOM 110 CA ASN 50 15.224 15.989 23.994 0.00 1.00 ATOM 111 C ASN 50 15.742 14.644 23.535 0.00 1.00 ATOM 112 CB ASN 50 15.816 16.311 25.394 0.00 1.00 ATOM 113 N ILE 51 15.106 13.561 23.987 0.00 1.00 ATOM 114 CA ILE 51 15.433 12.203 23.600 0.00 1.00 ATOM 115 C ILE 51 15.195 11.934 22.133 0.00 1.00 ATOM 116 CB ILE 51 14.770 11.155 24.498 0.00 1.00 ATOM 117 N VAL 52 14.075 12.411 21.582 0.00 1.00 ATOM 118 CA VAL 52 13.662 11.980 20.260 0.00 1.00 ATOM 119 C VAL 52 14.108 12.989 19.208 0.00 1.00 ATOM 120 CB VAL 52 12.174 11.624 20.202 0.00 1.00 ATOM 121 N LYS 53 14.735 14.097 19.623 0.00 1.00 ATOM 122 CA LYS 53 15.281 15.050 18.668 0.00 1.00 ATOM 123 C LYS 53 16.747 14.769 18.442 0.00 1.00 ATOM 124 CB LYS 53 15.139 16.507 19.199 0.00 1.00 ATOM 125 N ARG 54 17.318 13.801 19.174 0.00 1.00 ATOM 126 CA ARG 54 18.695 13.395 18.967 0.00 1.00 ATOM 127 C ARG 54 18.678 12.121 18.151 0.00 1.00 ATOM 128 CB ARG 54 19.415 13.197 20.334 0.00 1.00 ATOM 129 N ASP 55 17.478 11.641 17.813 0.00 1.00 ATOM 130 CA ASP 55 17.258 10.425 17.075 0.00 1.00 ATOM 131 C ASP 55 16.715 10.805 15.719 0.00 1.00 ATOM 132 CB ASP 55 16.230 9.524 17.830 0.00 1.00 ATOM 133 N ARG 56 15.404 11.044 15.637 0.00 1.00 ATOM 134 CA ARG 56 14.707 11.173 14.380 0.00 1.00 ATOM 135 C ARG 56 13.600 12.200 14.536 0.00 1.00 ATOM 136 CB ARG 56 14.112 9.792 14.005 0.00 1.00 ATOM 137 N PRO 57 13.537 13.292 13.749 0.00 1.00 ATOM 138 CA PRO 57 12.531 14.335 13.930 0.00 1.00 ATOM 139 C PRO 57 11.141 13.900 13.540 0.00 1.00 ATOM 140 CB PRO 57 12.999 15.491 13.034 0.00 1.00 ATOM 141 N GLU 58 11.017 12.995 12.570 0.00 1.00 ATOM 142 CA GLU 58 9.757 12.418 12.153 0.00 1.00 ATOM 143 C GLU 58 9.091 11.650 13.272 0.00 1.00 ATOM 144 CB GLU 58 9.997 11.496 10.935 0.00 1.00 ATOM 145 N MET 59 9.885 10.883 14.025 0.00 1.00 ATOM 146 CA MET 59 9.418 10.093 15.140 0.00 1.00 ATOM 147 C MET 59 9.115 10.957 16.338 0.00 1.00 ATOM 148 CB MET 59 10.478 9.025 15.504 0.00 1.00 ATOM 149 N LYS 60 9.771 12.117 16.447 0.00 1.00 ATOM 150 CA LYS 60 9.510 13.089 17.492 0.00 1.00 ATOM 151 C LYS 60 8.108 13.633 17.400 0.00 1.00 ATOM 152 CB LYS 60 10.527 14.253 17.404 0.00 1.00 ATOM 153 N ALA 61 7.663 13.941 16.178 0.00 1.00 ATOM 154 CA ALA 61 6.326 14.408 15.891 0.00 1.00 ATOM 155 C ALA 61 5.275 13.389 16.255 0.00 1.00 ATOM 156 CB ALA 61 6.168 14.769 14.400 0.00 1.00 ATOM 157 N GLU 62 5.518 12.120 15.916 0.00 1.00 ATOM 158 CA GLU 62 4.653 11.005 16.249 0.00 1.00 ATOM 159 C GLU 62 4.505 10.802 17.739 0.00 1.00 ATOM 160 CB GLU 62 5.216 9.701 15.629 0.00 1.00 ATOM 161 N VAL 63 5.624 10.842 18.467 0.00 1.00 ATOM 162 CA VAL 63 5.688 10.694 19.906 0.00 1.00 ATOM 163 C VAL 63 4.967 11.809 20.637 0.00 1.00 ATOM 164 CB VAL 63 7.124 10.493 20.390 0.00 1.00 ATOM 165 N GLN 64 5.123 13.054 20.175 0.00 1.00 ATOM 166 CA GLN 64 4.400 14.195 20.701 0.00 1.00 ATOM 167 C GLN 64 2.897 14.125 20.533 0.00 1.00 ATOM 168 CB GLN 64 4.957 15.521 20.128 0.00 1.00 ATOM 169 N LYS 65 2.432 13.655 19.374 0.00 1.00 ATOM 170 CA LYS 65 1.027 13.405 19.111 0.00 1.00 ATOM 171 C LYS 65 0.430 12.360 20.028 0.00 1.00 ATOM 172 CB LYS 65 0.824 12.979 17.636 0.00 1.00 ATOM 173 N GLN 66 1.163 11.263 20.246 0.00 1.00 ATOM 174 CA GLN 66 0.821 10.191 21.159 0.00 1.00 ATOM 175 C GLN 66 0.731 10.626 22.603 0.00 1.00 ATOM 176 CB GLN 66 1.854 9.041 21.040 0.00 1.00 ATOM 177 N LEU 67 1.678 11.459 23.044 0.00 1.00 ATOM 178 CA LEU 67 1.753 12.050 24.365 0.00 1.00 ATOM 179 C LEU 67 0.573 12.938 24.670 0.00 1.00 ATOM 180 CB LEU 67 3.082 12.845 24.497 0.00 1.00 ATOM 181 N LYS 68 0.164 13.746 23.691 0.00 1.00 ATOM 182 CA LYS 68 -0.838 14.774 23.861 0.00 1.00 ATOM 183 C LYS 68 -2.210 14.290 23.467 0.00 1.00 ATOM 184 CB LYS 68 -0.431 16.037 23.070 0.00 1.00 ATOM 185 N SER 69 -2.331 12.992 23.186 0.00 1.00 ATOM 186 CA SER 69 -3.600 12.321 23.005 0.00 1.00 ATOM 187 C SER 69 -3.651 11.138 23.939 0.00 1.00 ATOM 188 CB SER 69 -3.720 11.781 21.557 0.00 1.00 ATOM 189 N GLY 70 -2.659 11.021 24.827 0.00 1.00 ATOM 190 CA GLY 70 -2.428 9.842 25.625 0.00 1.00 ATOM 191 C GLY 70 -2.436 10.176 27.079 0.00 1.00 ATOM 192 CB GLY 70 -1.448 9.462 25.374 0.00 1.00 ATOM 193 N GLY 71 -1.320 10.715 27.578 0.00 1.00 ATOM 194 CA GLY 71 -1.059 10.768 29.000 0.00 1.00 ATOM 195 C GLY 71 0.147 9.941 29.317 0.00 1.00 ATOM 196 CB GLY 71 -1.905 10.340 29.520 0.00 1.00 ATOM 197 N VAL 72 1.121 9.930 28.401 0.00 1.00 ATOM 198 CA VAL 72 2.352 9.161 28.446 0.00 1.00 ATOM 199 C VAL 72 3.281 9.634 29.562 0.00 1.00 ATOM 200 CB VAL 72 3.014 9.146 27.059 0.00 1.00 ATOM 201 N MET 73 2.895 10.716 30.246 0.00 1.00 ATOM 202 CA MET 73 3.480 11.211 31.472 0.00 1.00 ATOM 203 C MET 73 3.494 10.202 32.600 0.00 1.00 ATOM 204 CB MET 73 2.760 12.508 31.930 0.00 1.00 ATOM 205 N GLN 74 2.567 9.247 32.567 0.00 1.00 ATOM 206 CA GLN 74 2.446 8.223 33.569 0.00 1.00 ATOM 207 C GLN 74 3.461 7.103 33.376 0.00 1.00 ATOM 208 CB GLN 74 1.007 7.648 33.549 0.00 1.00 ATOM 209 N TYR 75 4.170 7.063 32.237 0.00 1.00 ATOM 210 CA TYR 75 5.208 6.065 31.982 0.00 1.00 ATOM 211 C TYR 75 6.573 6.684 32.191 0.00 1.00 ATOM 212 CB TYR 75 5.138 5.598 30.494 0.00 1.00 ATOM 213 N ASN 76 6.629 7.998 32.407 0.00 1.00 ATOM 214 CA ASN 76 7.890 8.687 32.588 0.00 1.00 ATOM 215 C ASN 76 8.034 9.142 34.014 0.00 1.00 ATOM 216 CB ASN 76 7.992 9.881 31.613 0.00 1.00 ATOM 217 N TYR 77 6.958 9.047 34.801 0.00 1.00 ATOM 218 CA TYR 77 7.007 9.087 36.249 0.00 1.00 ATOM 219 C TYR 77 7.830 7.913 36.750 0.00 1.00 ATOM 220 CB TYR 77 5.546 9.053 36.809 0.00 1.00 ATOM 221 N VAL 78 7.535 6.745 36.187 0.00 1.00 ATOM 222 CA VAL 78 8.033 5.413 36.429 0.00 1.00 ATOM 223 C VAL 78 9.506 5.327 36.200 0.00 1.00 ATOM 224 CB VAL 78 7.382 4.550 35.362 0.00 1.00 ATOM 225 N LEU 79 9.949 5.912 35.089 0.00 1.00 ATOM 226 CA LEU 79 11.316 5.986 34.661 0.00 1.00 ATOM 227 C LEU 79 12.147 6.698 35.690 0.00 1.00 ATOM 228 CB LEU 79 11.385 6.795 33.339 0.00 1.00 ATOM 229 N TYR 80 11.600 7.787 36.230 0.00 1.00 ATOM 230 CA TYR 80 12.254 8.610 37.207 0.00 1.00 ATOM 231 C TYR 80 11.909 8.175 38.613 0.00 1.00 ATOM 232 CB TYR 80 11.868 10.103 37.012 0.00 1.00 ATOM 233 N CYS 81 11.501 6.917 38.771 0.00 1.00 ATOM 234 CA CYS 81 11.325 6.274 40.049 0.00 1.00 ATOM 235 C CYS 81 12.091 4.974 40.079 0.00 1.00 ATOM 236 CB CYS 81 9.826 5.974 40.294 0.00 1.00 ATOM 237 N ASP 82 12.841 4.687 39.013 0.00 1.00 ATOM 238 CA ASP 82 13.729 3.553 38.927 0.00 1.00 ATOM 239 C ASP 82 15.096 4.127 38.676 0.00 1.00 ATOM 240 CB ASP 82 13.361 2.644 37.724 0.00 1.00 ATOM 241 N LYS 83 16.118 3.581 39.343 0.00 1.00 ATOM 242 CA LYS 83 17.467 4.093 39.220 0.00 1.00 ATOM 243 C LYS 83 18.257 3.200 38.295 0.00 1.00 ATOM 244 CB LYS 83 18.165 4.065 40.605 0.00 1.00 ATOM 245 N ASN 84 17.698 2.040 37.951 0.00 1.00 ATOM 246 CA ASN 84 18.396 1.015 37.211 0.00 1.00 ATOM 247 C ASN 84 17.940 1.003 35.771 0.00 1.00 ATOM 248 CB ASN 84 18.081 -0.381 37.822 0.00 1.00 ATOM 249 N PHE 85 17.071 1.946 35.399 0.00 1.00 ATOM 250 CA PHE 85 16.544 2.056 34.062 0.00 1.00 ATOM 251 C PHE 85 16.985 3.353 33.458 0.00 1.00 ATOM 252 CB PHE 85 14.996 1.970 34.063 0.00 1.00 ATOM 253 N ASN 86 17.558 3.270 32.256 0.00 1.00 ATOM 254 CA ASN 86 17.984 4.410 31.476 0.00 1.00 ATOM 255 C ASN 86 16.791 4.953 30.739 0.00 1.00 ATOM 256 CB ASN 86 19.057 3.998 30.431 0.00 1.00 ATOM 257 N ASN 87 16.850 6.237 30.375 0.00 1.00 ATOM 258 CA ASN 87 15.816 6.919 29.620 0.00 1.00 ATOM 259 C ASN 87 15.597 6.276 28.272 0.00 1.00 ATOM 260 CB ASN 87 16.212 8.405 29.365 0.00 1.00 ATOM 261 N LYS 88 16.690 5.929 27.587 0.00 1.00 ATOM 262 CA LYS 88 16.672 5.248 26.313 0.00 1.00 ATOM 263 C LYS 88 16.009 3.895 26.338 0.00 1.00 ATOM 264 CB LYS 88 18.106 5.114 25.749 0.00 1.00 ATOM 265 N ASN 89 16.257 3.111 27.394 0.00 1.00 ATOM 266 CA ASN 89 15.664 1.795 27.574 0.00 1.00 ATOM 267 C ASN 89 14.161 1.882 27.699 0.00 1.00 ATOM 268 CB ASN 89 16.194 1.118 28.873 0.00 1.00 ATOM 269 N ILE 90 13.678 2.808 28.531 0.00 1.00 ATOM 270 CA ILE 90 12.273 3.071 28.758 0.00 1.00 ATOM 271 C ILE 90 11.562 3.564 27.521 0.00 1.00 ATOM 272 CB ILE 90 12.086 4.026 29.939 0.00 1.00 ATOM 273 N ILE 91 12.168 4.505 26.796 0.00 1.00 ATOM 274 CA ILE 91 11.613 5.035 25.567 0.00 1.00 ATOM 275 C ILE 91 11.545 3.981 24.481 0.00 1.00 ATOM 276 CB ILE 91 12.279 6.340 25.125 0.00 1.00 ATOM 277 N ALA 92 12.544 3.097 24.416 0.00 1.00 ATOM 278 CA ALA 92 12.530 1.955 23.528 0.00 1.00 ATOM 279 C ALA 92 11.368 1.023 23.801 0.00 1.00 ATOM 280 CB ALA 92 13.844 1.152 23.606 0.00 1.00 ATOM 281 N GLU 93 11.085 0.760 25.080 0.00 1.00 ATOM 282 CA GLU 93 9.964 -0.044 25.521 0.00 1.00 ATOM 283 C GLU 93 8.605 0.536 25.180 0.00 1.00 ATOM 284 CB GLU 93 10.045 -0.280 27.051 0.00 1.00 ATOM 285 N VAL 94 8.412 1.843 25.412 0.00 1.00 ATOM 286 CA VAL 94 7.141 2.518 25.183 0.00 1.00 ATOM 287 C VAL 94 6.790 2.577 23.711 0.00 1.00 ATOM 288 CB VAL 94 7.024 3.890 25.865 0.00 1.00 ATOM 289 N VAL 95 7.784 2.865 22.863 0.00 1.00 ATOM 290 CA VAL 95 7.679 2.852 21.418 0.00 1.00 ATOM 291 C VAL 95 7.418 1.447 20.916 0.00 1.00 ATOM 292 CB VAL 95 8.886 3.504 20.743 0.00 1.00 ATOM 293 N GLY 96 8.118 0.467 21.489 0.00 1.00 ATOM 294 CA GLY 96 7.963 -0.936 21.171 0.00 1.00 ATOM 295 C GLY 96 9.018 -1.362 20.196 0.00 1.00 ATOM 296 CB GLY 96 6.998 -1.070 20.701 0.00 1.00 ATOM 297 N GLU 97 10.233 -0.846 20.372 0.00 1.00 ATOM 298 CA GLU 97 11.373 -1.114 19.527 0.00 1.00 ATOM 299 C GLU 97 11.986 -2.478 19.893 0.00 1.00 ATOM 300 CB GLU 97 12.445 -0.011 19.722 0.00 1.00 TER END