####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 107 ( 428), selected 107 , name R1091-D2TS294_1 # Molecule2: number of CA atoms 107 ( 839), selected 107 , name R1091-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R1091-D2TS294_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 107 498 - 604 2.24 2.24 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 59 546 - 604 1.97 2.28 LCS_AVERAGE: 38.61 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 558 - 590 0.95 2.36 LONGEST_CONTINUOUS_SEGMENT: 33 559 - 591 0.99 2.36 LONGEST_CONTINUOUS_SEGMENT: 33 572 - 604 0.98 2.64 LCS_AVERAGE: 18.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 107 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 498 S 498 14 17 107 3 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT D 499 D 499 14 17 107 21 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT P 500 P 500 14 17 107 7 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT L 501 L 501 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT T 502 T 502 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 503 V 503 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT P 504 P 504 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 505 V 505 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT E 506 E 506 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 507 V 507 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT E 508 E 508 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT W 509 W 509 14 17 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Q 510 Q 510 14 17 107 24 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT G 511 G 511 14 17 107 5 35 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 512 V 512 3 17 107 3 12 54 79 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT T 513 T 513 4 17 107 3 10 59 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT G 514 G 514 4 17 107 3 5 5 17 39 68 96 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT A 515 A 515 4 7 107 3 3 4 6 9 22 48 82 99 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT R 516 R 516 4 23 107 3 40 68 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT T 517 T 517 4 23 107 3 9 20 36 72 96 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 518 V 518 4 23 107 3 37 69 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT I 519 I 519 4 23 107 6 35 63 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT T 520 T 520 4 23 107 3 12 56 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT A 521 A 521 3 23 107 3 3 15 43 72 82 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT D 522 D 522 13 23 107 18 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Q 523 Q 523 13 23 107 11 45 66 79 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT P 524 P 524 13 23 107 10 43 64 79 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT S 525 S 525 13 23 107 10 45 66 78 92 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 526 N 526 13 23 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 527 V 527 13 23 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT E 528 E 528 13 23 107 22 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT L 529 L 529 13 23 107 19 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 530 K 530 13 23 107 12 48 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT L 531 L 531 13 23 107 10 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 532 V 532 13 23 107 11 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Q 533 Q 533 13 23 107 24 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 534 K 534 13 23 107 6 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 535 N 535 13 23 107 14 40 65 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 536 K 536 7 23 107 4 44 68 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 537 N 537 4 23 107 3 27 54 74 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT G 538 G 538 4 23 107 3 4 4 70 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT G 539 G 539 3 22 107 1 3 3 4 10 60 86 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT S 540 S 540 3 22 107 4 33 57 78 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT D 541 D 541 4 21 107 3 4 4 32 51 89 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 542 N 542 4 21 107 3 12 36 71 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Q 543 Q 543 4 8 107 3 4 4 7 13 21 25 37 91 101 104 105 106 107 107 107 107 107 107 107 LCS_GDT D 544 D 544 4 10 107 3 4 4 17 31 89 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Y 545 Y 545 9 10 107 7 27 45 69 86 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT R 546 R 546 9 59 107 10 32 58 79 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 547 K 547 9 59 107 10 32 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT T 548 T 548 9 59 107 19 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 549 N 549 9 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 550 V 550 9 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 551 N 551 9 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 552 V 552 9 59 107 15 48 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT S 553 S 553 9 59 107 5 27 58 79 92 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 554 K 554 5 59 107 3 3 5 6 8 10 25 43 55 78 94 104 106 107 107 107 107 107 107 107 LCS_GDT N 555 N 555 5 59 107 3 3 5 5 6 16 25 32 59 80 100 104 106 107 107 107 107 107 107 107 LCS_GDT V 556 V 556 14 59 107 3 10 26 79 92 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT S 557 S 557 30 59 107 10 37 64 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 558 N 558 33 59 107 5 41 65 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT E 559 E 559 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT T 560 T 560 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT R 561 R 561 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 562 N 562 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT F 563 F 563 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT E 564 E 564 33 59 107 16 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 565 K 565 33 59 107 7 48 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 566 V 566 33 59 107 26 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT A 567 A 567 33 59 107 14 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 568 K 568 33 59 107 10 45 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT G 569 G 569 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Y 570 Y 570 33 59 107 19 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Q 571 Q 571 33 59 107 6 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Y 572 Y 572 33 59 107 11 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT D 573 D 573 33 59 107 22 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT L 574 L 574 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT I 575 I 575 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT A 576 A 576 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT P 577 P 577 33 59 107 4 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT D 578 D 578 33 59 107 3 11 69 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 579 V 579 33 59 107 14 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT P 580 P 580 33 59 107 9 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT A 581 A 581 33 59 107 15 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT F 582 F 582 33 59 107 15 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT T 583 T 583 33 59 107 15 47 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 584 K 584 33 59 107 15 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT E 585 E 585 33 59 107 24 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT I 586 I 586 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 587 K 587 33 59 107 26 47 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 588 N 588 33 59 107 13 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 589 V 589 33 59 107 26 48 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT G 590 G 590 33 59 107 11 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT T 591 T 591 33 59 107 8 29 54 78 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT E 592 E 592 33 59 107 7 17 35 74 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT S 593 S 593 33 59 107 7 17 53 75 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT N 594 N 594 33 59 107 7 40 67 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT P 595 P 595 33 59 107 15 40 68 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT S 596 S 596 33 59 107 14 46 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT F 597 F 597 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 598 K 598 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT V 599 V 599 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT I 600 I 600 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Y 601 Y 601 33 59 107 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT K 602 K 602 33 59 107 15 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT Q 603 Q 603 33 59 107 6 49 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_GDT L 604 L 604 33 59 107 14 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 LCS_AVERAGE LCS_A: 52.43 ( 18.68 38.61 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 27 51 70 80 93 97 99 101 103 104 104 105 106 107 107 107 107 107 107 107 GDT PERCENT_AT 25.23 47.66 65.42 74.77 86.92 90.65 92.52 94.39 96.26 97.20 97.20 98.13 99.07 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.36 0.65 0.87 1.12 1.42 1.49 1.57 1.69 1.81 1.89 1.89 1.97 2.18 2.24 2.24 2.24 2.24 2.24 2.24 2.24 GDT RMS_ALL_AT 2.43 2.54 2.45 2.34 2.28 2.28 2.28 2.26 2.25 2.26 2.25 2.25 2.24 2.24 2.24 2.24 2.24 2.24 2.24 2.24 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 498 S 498 1.283 2 0.047 0.044 2.764 39.545 30.909 - LGA D 499 D 499 1.358 4 0.042 0.038 1.728 49.091 30.909 - LGA P 500 P 500 1.360 3 0.049 0.042 1.519 49.091 35.325 - LGA L 501 L 501 0.475 4 0.031 0.028 0.846 65.909 45.455 - LGA T 502 T 502 0.580 3 0.032 0.046 0.772 61.364 46.753 - LGA V 503 V 503 0.603 3 0.035 0.029 0.725 61.364 46.753 - LGA P 504 P 504 0.363 3 0.041 0.038 0.449 75.000 57.143 - LGA V 505 V 505 0.633 3 0.045 0.047 0.736 65.909 49.351 - LGA E 506 E 506 0.777 5 0.037 0.032 0.807 61.364 36.364 - LGA V 507 V 507 0.754 3 0.040 0.036 0.901 61.364 46.753 - LGA E 508 E 508 0.945 5 0.041 0.039 0.998 61.364 36.364 - LGA W 509 W 509 1.092 10 0.079 0.071 1.257 49.091 18.701 - LGA Q 510 Q 510 1.359 5 0.114 0.102 1.427 49.091 29.091 - LGA G 511 G 511 1.940 1 0.078 0.078 2.132 35.000 35.000 - LGA V 512 V 512 2.483 3 0.041 0.048 2.886 25.909 18.701 - LGA T 513 T 513 1.905 3 0.058 0.050 3.309 49.545 30.909 - LGA G 514 G 514 4.695 1 0.043 0.043 4.775 7.727 7.727 - LGA A 515 A 515 5.983 1 0.045 0.054 8.751 1.364 1.091 - LGA R 516 R 516 1.867 7 0.087 0.074 3.285 26.818 13.223 - LGA T 517 T 517 4.154 3 0.104 0.101 6.039 10.455 5.974 - LGA V 518 V 518 1.363 3 0.047 0.042 1.847 49.545 35.584 - LGA I 519 I 519 1.931 4 0.118 0.102 2.765 41.818 24.318 - LGA T 520 T 520 2.186 3 0.047 0.046 3.825 25.909 16.364 - LGA A 521 A 521 4.817 1 0.066 0.076 6.809 9.545 7.636 - LGA D 522 D 522 0.887 4 0.040 0.043 2.155 46.364 27.955 - LGA Q 523 Q 523 2.169 5 0.034 0.033 2.320 31.818 18.384 - LGA P 524 P 524 2.315 3 0.079 0.067 2.434 28.636 21.818 - LGA S 525 S 525 2.473 2 0.075 0.066 2.876 31.818 25.758 - LGA N 526 N 526 1.133 4 0.041 0.038 1.759 45.455 30.909 - LGA V 527 V 527 1.115 3 0.044 0.040 1.115 49.091 37.403 - LGA E 528 E 528 1.173 5 0.045 0.038 1.244 49.091 29.091 - LGA L 529 L 529 0.720 4 0.043 0.042 0.945 61.364 40.909 - LGA K 530 K 530 1.214 5 0.043 0.038 1.281 49.091 29.091 - LGA L 531 L 531 1.257 4 0.055 0.048 1.317 49.091 32.727 - LGA V 532 V 532 1.741 3 0.034 0.034 2.168 41.818 29.351 - LGA Q 533 Q 533 1.406 5 0.031 0.031 1.633 45.455 27.475 - LGA K 534 K 534 1.755 5 0.053 0.049 2.054 41.818 22.828 - LGA N 535 N 535 2.208 4 0.031 0.033 3.249 35.000 19.773 - LGA K 536 K 536 1.446 5 0.064 0.059 1.821 45.455 27.475 - LGA N 537 N 537 2.917 4 0.064 0.058 3.598 23.182 12.955 - LGA G 538 G 538 2.678 1 0.073 0.073 3.812 19.091 19.091 - LGA G 539 G 539 5.470 1 0.100 0.100 5.470 5.455 5.455 - LGA S 540 S 540 2.299 2 0.068 0.063 3.419 26.818 20.909 - LGA D 541 D 541 3.641 4 0.066 0.057 6.041 19.091 9.545 - LGA N 542 N 542 2.572 4 0.068 0.059 4.607 18.182 9.318 - LGA Q 543 Q 543 5.757 5 0.079 0.071 8.065 2.727 1.212 - LGA D 544 D 544 3.941 4 0.047 0.045 4.827 15.909 8.182 - LGA Y 545 Y 545 3.015 8 0.081 0.070 5.509 20.909 6.970 - LGA R 546 R 546 2.135 7 0.063 0.055 2.178 31.818 15.041 - LGA K 547 K 547 1.688 5 0.028 0.045 2.014 38.636 22.828 - LGA T 548 T 548 0.753 3 0.039 0.051 0.993 61.364 46.753 - LGA N 549 N 549 0.612 4 0.049 0.046 0.787 61.364 40.909 - LGA V 550 V 550 0.595 3 0.069 0.061 0.620 61.364 46.753 - LGA N 551 N 551 0.721 4 0.090 0.078 0.887 61.364 43.182 - LGA V 552 V 552 1.370 3 0.076 0.069 1.994 45.455 35.325 - LGA S 553 S 553 2.726 2 0.037 0.047 4.197 17.727 22.727 - LGA K 554 K 554 8.439 5 0.102 0.092 10.811 0.000 0.000 - LGA N 555 N 555 8.025 4 0.094 0.083 10.251 0.000 0.000 - LGA V 556 V 556 2.418 3 0.036 0.044 3.746 21.818 16.364 - LGA S 557 S 557 2.163 2 0.089 0.084 2.463 31.818 27.576 - LGA N 558 N 558 1.784 4 0.066 0.072 1.851 38.182 25.455 - LGA E 559 E 559 0.775 5 0.071 0.061 1.094 57.273 32.727 - LGA T 560 T 560 0.526 3 0.035 0.033 0.627 61.364 49.351 - LGA R 561 R 561 0.568 7 0.035 0.037 0.730 65.909 31.405 - LGA N 562 N 562 0.321 4 0.033 0.053 0.682 75.000 47.727 - LGA F 563 F 563 0.547 7 0.084 0.074 0.698 65.909 31.405 - LGA E 564 E 564 0.816 5 0.062 0.063 1.103 61.364 34.545 - LGA K 565 K 565 1.322 5 0.033 0.030 2.103 53.182 27.879 - LGA V 566 V 566 0.807 3 0.042 0.039 0.860 61.364 46.753 - LGA A 567 A 567 0.835 1 0.019 0.023 0.888 61.364 65.455 - LGA K 568 K 568 1.043 5 0.026 0.021 1.594 49.545 31.111 - LGA G 569 G 569 0.653 1 0.018 0.018 0.766 61.364 61.364 - LGA Y 570 Y 570 1.338 8 0.035 0.032 1.534 45.455 20.606 - LGA Q 571 Q 571 1.821 5 0.054 0.051 2.058 38.182 21.212 - LGA Y 572 Y 572 1.646 8 0.031 0.032 1.741 38.182 16.970 - LGA D 573 D 573 1.364 4 0.046 0.051 1.646 49.091 30.909 - LGA L 574 L 574 0.382 4 0.030 0.026 0.551 70.455 47.727 - LGA I 575 I 575 0.533 4 0.023 0.027 0.768 65.909 43.182 - LGA A 576 A 576 0.598 1 0.053 0.066 1.142 61.364 62.182 - LGA P 577 P 577 1.238 3 0.026 0.026 1.889 53.182 37.662 - LGA D 578 D 578 2.143 4 0.066 0.065 2.820 35.000 20.909 - LGA V 579 V 579 1.064 3 0.049 0.043 1.640 45.455 37.662 - LGA P 580 P 580 1.490 3 0.063 0.061 2.090 46.364 38.182 - LGA A 581 A 581 1.412 1 0.011 0.036 1.473 49.091 52.364 - LGA F 582 F 582 1.322 7 0.026 0.027 1.457 49.091 23.802 - LGA T 583 T 583 1.357 3 0.059 0.052 1.474 49.091 37.403 - LGA K 584 K 584 0.994 5 0.012 0.048 1.404 53.182 30.909 - LGA E 585 E 585 0.832 5 0.040 0.037 0.971 61.364 36.364 - LGA I 586 I 586 0.277 4 0.027 0.030 0.506 75.000 47.727 - LGA K 587 K 587 0.575 5 0.037 0.034 0.707 65.909 38.384 - LGA N 588 N 588 0.867 4 0.027 0.026 0.979 61.364 40.909 - LGA V 589 V 589 0.567 3 0.043 0.049 0.749 61.364 49.351 - LGA G 590 G 590 0.780 1 0.040 0.040 0.979 61.364 61.364 - LGA T 591 T 591 2.191 3 0.058 0.051 2.564 31.818 22.078 - LGA E 592 E 592 2.645 5 0.043 0.041 3.078 20.455 11.111 - LGA S 593 S 593 2.786 2 0.028 0.027 3.465 23.182 18.485 - LGA N 594 N 594 1.855 4 0.034 0.034 2.236 35.000 22.273 - LGA P 595 P 595 1.379 3 0.023 0.028 1.520 49.091 35.325 - LGA S 596 S 596 0.935 2 0.049 0.044 1.202 57.273 49.091 - LGA F 597 F 597 0.726 7 0.059 0.052 0.747 61.364 29.752 - LGA K 598 K 598 0.699 5 0.044 0.038 0.851 65.909 38.384 - LGA V 599 V 599 0.335 3 0.048 0.041 0.426 75.000 57.143 - LGA I 600 I 600 0.638 4 0.049 0.043 0.972 61.364 40.909 - LGA Y 601 Y 601 0.509 8 0.058 0.052 0.961 65.909 30.303 - LGA K 602 K 602 1.525 5 0.043 0.038 1.963 45.455 25.859 - LGA Q 603 Q 603 1.633 5 0.029 0.027 1.797 38.182 22.626 - LGA L 604 L 604 1.373 4 0.075 0.068 2.082 42.273 27.500 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 107 428 321 75.00 839 422 50.30 107 0 SUMMARY(RMSD_GDC): 2.242 2.105 2.309 44.749 30.376 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 107 107 4.0 101 1.69 79.206 73.506 5.651 LGA_LOCAL RMSD: 1.687 Number of atoms: 101 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.255 Number of assigned atoms: 107 Std_ASGN_ATOMS RMSD: 2.242 Standard rmsd on all 107 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.436068 * X + -0.840023 * Y + -0.322810 * Z + -42.795952 Y_new = 0.347182 * X + 0.487978 * Y + -0.800838 * Z + -17.534805 Z_new = 0.830247 * X + 0.237146 * Y + 0.504432 * Z + 12.842917 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.672398 -0.979550 0.439463 [DEG: 38.5255 -56.1241 25.1794 ] ZXZ: -0.383167 1.042072 1.292571 [DEG: -21.9539 59.7063 74.0589 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R1091-D2TS294_1 REMARK 2: R1091-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R1091-D2TS294_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 107 107 4.0 101 1.69 73.506 2.24 REMARK ---------------------------------------------------------- MOLECULE R1091-D2TS294_1 PFRMAT TS TARGET R1091-D2 MODEL 1 PARENT N/A ATOM 1 N SER 498 18.843 36.408 23.192 0.00 1.00 ATOM 2 CA SER 498 19.284 36.202 21.844 0.00 1.00 ATOM 3 C SER 498 19.991 37.428 21.388 0.00 1.00 ATOM 4 CB SER 498 18.114 35.896 20.929 0.00 1.00 ATOM 5 N ASP 499 19.911 38.513 22.177 0.00 1.00 ATOM 6 CA ASP 499 20.465 39.754 21.729 0.00 1.00 ATOM 7 C ASP 499 21.923 39.732 22.017 0.00 1.00 ATOM 8 CB ASP 499 19.801 40.948 22.416 0.00 1.00 ATOM 9 N PRO 500 22.639 40.623 21.398 0.00 1.00 ATOM 10 CA PRO 500 24.062 40.588 21.481 0.00 1.00 ATOM 11 C PRO 500 24.435 40.763 22.914 0.00 1.00 ATOM 12 CB PRO 500 24.510 41.770 20.615 0.00 1.00 ATOM 13 N LEU 501 25.654 40.338 23.296 0.00 1.00 ATOM 14 CA LEU 501 26.034 40.440 24.672 0.00 1.00 ATOM 15 C LEU 501 26.882 41.638 24.936 0.00 1.00 ATOM 16 CB LEU 501 26.789 39.175 25.103 0.00 1.00 ATOM 17 N THR 502 26.981 42.015 26.228 0.00 1.00 ATOM 18 CA THR 502 27.841 43.091 26.616 0.00 1.00 ATOM 19 C THR 502 28.942 42.527 27.462 0.00 1.00 ATOM 20 CB THR 502 27.078 44.186 27.387 0.00 1.00 ATOM 21 N VAL 503 30.190 42.968 27.203 0.00 1.00 ATOM 22 CA VAL 503 31.332 42.484 27.925 0.00 1.00 ATOM 23 C VAL 503 31.907 43.712 28.551 0.00 1.00 ATOM 24 CB VAL 503 32.360 41.800 27.002 0.00 1.00 ATOM 25 N PRO 504 31.804 43.858 29.845 0.00 1.00 ATOM 26 CA PRO 504 32.426 44.989 30.485 0.00 1.00 ATOM 27 C PRO 504 33.893 44.739 30.522 0.00 1.00 ATOM 28 CB PRO 504 31.806 45.010 31.887 0.00 1.00 ATOM 29 N VAL 505 34.714 45.797 30.468 0.00 1.00 ATOM 30 CA VAL 505 36.116 45.628 30.698 0.00 1.00 ATOM 31 C VAL 505 36.472 46.628 31.746 0.00 1.00 ATOM 32 CB VAL 505 36.940 45.866 29.418 0.00 1.00 ATOM 33 N GLU 506 37.329 46.230 32.702 0.00 1.00 ATOM 34 CA GLU 506 37.708 47.145 33.735 0.00 1.00 ATOM 35 C GLU 506 39.189 47.297 33.639 0.00 1.00 ATOM 36 CB GLU 506 37.294 46.642 35.120 0.00 1.00 ATOM 37 N VAL 507 39.692 48.538 33.764 0.00 1.00 ATOM 38 CA VAL 507 41.109 48.743 33.725 0.00 1.00 ATOM 39 C VAL 507 41.499 49.136 35.108 0.00 1.00 ATOM 40 CB VAL 507 41.503 49.842 32.719 0.00 1.00 ATOM 41 N GLU 508 42.549 48.492 35.648 0.00 1.00 ATOM 42 CA GLU 508 43.006 48.838 36.956 0.00 1.00 ATOM 43 C GLU 508 44.435 49.193 36.805 0.00 1.00 ATOM 44 CB GLU 508 42.829 47.688 37.951 0.00 1.00 ATOM 45 N TRP 509 44.879 50.226 37.537 0.00 1.00 ATOM 46 CA TRP 509 46.237 50.616 37.391 0.00 1.00 ATOM 47 C TRP 509 46.861 50.313 38.694 0.00 1.00 ATOM 48 CB TRP 509 46.380 52.100 37.046 0.00 1.00 ATOM 49 N GLN 510 48.041 49.693 38.629 0.00 1.00 ATOM 50 CA GLN 510 48.800 49.422 39.798 0.00 1.00 ATOM 51 C GLN 510 50.081 50.050 39.434 0.00 1.00 ATOM 52 CB GLN 510 48.945 47.929 40.102 0.00 1.00 ATOM 53 N GLY 511 50.843 50.516 40.419 0.00 1.00 ATOM 54 CA GLY 511 52.097 51.049 40.035 0.00 1.00 ATOM 55 C GLY 511 51.850 52.512 40.084 0.00 1.00 ATOM 56 CB GLY 511 52.345 50.785 39.016 0.00 1.00 ATOM 57 N VAL 512 52.197 53.053 41.245 0.00 1.00 ATOM 58 CA VAL 512 52.970 52.091 41.916 0.00 1.00 ATOM 59 C VAL 512 52.177 51.141 42.750 0.00 1.00 ATOM 60 CB VAL 512 53.997 52.809 42.811 0.00 1.00 ATOM 61 N THR 513 52.863 50.064 43.171 0.00 1.00 ATOM 62 CA THR 513 52.262 48.991 43.881 0.00 1.00 ATOM 63 C THR 513 51.774 49.482 45.197 0.00 1.00 ATOM 64 CB THR 513 53.244 47.823 44.081 0.00 1.00 ATOM 65 N GLY 514 52.601 50.266 45.892 0.00 1.00 ATOM 66 CA GLY 514 52.308 50.638 47.231 0.00 1.00 ATOM 67 C GLY 514 51.202 51.613 47.311 0.00 1.00 ATOM 68 CB GLY 514 53.196 51.105 47.634 0.00 1.00 ATOM 69 N ALA 515 50.973 52.351 46.215 0.00 1.00 ATOM 70 CA ALA 515 50.042 53.407 46.382 0.00 1.00 ATOM 71 C ALA 515 49.106 53.576 45.273 0.00 1.00 ATOM 72 CB ALA 515 50.718 54.772 46.590 0.00 1.00 ATOM 73 N ARG 516 47.881 53.890 45.690 0.00 1.00 ATOM 74 CA ARG 516 46.864 54.087 44.741 0.00 1.00 ATOM 75 C ARG 516 47.180 55.432 44.184 0.00 1.00 ATOM 76 CB ARG 516 45.474 54.046 45.357 0.00 1.00 ATOM 77 N THR 517 47.677 56.280 45.095 0.00 1.00 ATOM 78 CA THR 517 48.078 57.629 44.880 0.00 1.00 ATOM 79 C THR 517 49.231 58.001 44.074 0.00 1.00 ATOM 80 CB THR 517 48.293 58.292 46.253 0.00 1.00 ATOM 81 N VAL 518 50.385 57.330 44.198 0.00 1.00 ATOM 82 CA VAL 518 51.460 57.835 43.410 0.00 1.00 ATOM 83 C VAL 518 51.296 57.258 42.047 0.00 1.00 ATOM 84 CB VAL 518 52.826 57.444 44.000 0.00 1.00 ATOM 85 N ILE 519 50.564 58.011 41.232 0.00 1.00 ATOM 86 CA ILE 519 50.195 57.641 39.943 0.00 1.00 ATOM 87 C ILE 519 51.251 58.372 39.267 0.00 1.00 ATOM 88 CB ILE 519 48.781 58.080 39.518 0.00 1.00 ATOM 89 N THR 520 52.036 57.613 38.511 0.00 1.00 ATOM 90 CA THR 520 53.076 58.236 37.801 0.00 1.00 ATOM 91 C THR 520 52.525 59.215 36.853 0.00 1.00 ATOM 92 CB THR 520 53.939 57.206 37.049 0.00 1.00 ATOM 93 N ALA 521 53.331 60.250 36.641 0.00 1.00 ATOM 94 CA ALA 521 52.915 61.329 35.831 0.00 1.00 ATOM 95 C ALA 521 52.683 60.742 34.485 0.00 1.00 ATOM 96 CB ALA 521 53.996 62.411 35.680 0.00 1.00 ATOM 97 N ASP 522 53.455 59.688 34.197 0.00 1.00 ATOM 98 CA ASP 522 53.556 59.020 32.938 0.00 1.00 ATOM 99 C ASP 522 52.375 58.152 32.666 0.00 1.00 ATOM 100 CB ASP 522 54.831 58.175 32.884 0.00 1.00 ATOM 101 N GLN 523 51.375 58.109 33.566 0.00 1.00 ATOM 102 CA GLN 523 50.292 57.201 33.306 0.00 1.00 ATOM 103 C GLN 523 49.624 57.643 32.055 0.00 1.00 ATOM 104 CB GLN 523 49.294 57.163 34.465 0.00 1.00 ATOM 105 N PRO 524 49.411 56.713 31.171 0.00 1.00 ATOM 106 CA PRO 524 48.790 57.030 29.929 0.00 1.00 ATOM 107 C PRO 524 47.486 57.647 30.257 0.00 1.00 ATOM 108 CB PRO 524 48.636 55.676 29.226 0.00 1.00 ATOM 109 N SER 525 47.080 58.651 29.470 0.00 1.00 ATOM 110 CA SER 525 45.817 59.254 29.699 0.00 1.00 ATOM 111 C SER 525 44.835 58.399 29.002 0.00 1.00 ATOM 112 CB SER 525 45.771 60.677 29.178 0.00 1.00 ATOM 113 N ASN 526 45.304 57.559 28.061 0.00 1.00 ATOM 114 CA ASN 526 44.391 56.750 27.315 0.00 1.00 ATOM 115 C ASN 526 45.033 55.434 27.016 0.00 1.00 ATOM 116 CB ASN 526 43.958 57.447 26.039 0.00 1.00 ATOM 117 N VAL 527 44.223 54.360 27.064 0.00 1.00 ATOM 118 CA VAL 527 44.665 53.063 26.657 0.00 1.00 ATOM 119 C VAL 527 43.647 52.632 25.658 0.00 1.00 ATOM 120 CB VAL 527 44.736 52.074 27.836 0.00 1.00 ATOM 121 N GLU 528 44.059 51.846 24.651 0.00 1.00 ATOM 122 CA GLU 528 43.117 51.335 23.701 0.00 1.00 ATOM 123 C GLU 528 43.026 49.880 23.999 0.00 1.00 ATOM 124 CB GLU 528 43.559 51.581 22.257 0.00 1.00 ATOM 125 N LEU 529 41.870 49.265 23.729 0.00 1.00 ATOM 126 CA LEU 529 41.781 47.852 23.920 0.00 1.00 ATOM 127 C LEU 529 41.202 47.302 22.669 0.00 1.00 ATOM 128 CB LEU 529 40.906 47.499 25.128 0.00 1.00 ATOM 129 N LYS 530 41.714 46.144 22.228 0.00 1.00 ATOM 130 CA LYS 530 41.192 45.574 21.032 0.00 1.00 ATOM 131 C LYS 530 40.545 44.303 21.439 0.00 1.00 ATOM 132 CB LYS 530 42.281 45.333 19.985 0.00 1.00 ATOM 133 N LEU 531 39.356 44.064 20.879 0.00 1.00 ATOM 134 CA LEU 531 38.608 42.894 21.187 0.00 1.00 ATOM 135 C LEU 531 38.658 42.164 19.889 0.00 1.00 ATOM 136 CB LEU 531 37.171 43.205 21.623 0.00 1.00 ATOM 137 N VAL 532 39.086 40.899 19.908 0.00 1.00 ATOM 138 CA VAL 532 39.234 40.184 18.682 0.00 1.00 ATOM 139 C VAL 532 38.259 39.060 18.741 0.00 1.00 ATOM 140 CB VAL 532 40.668 39.648 18.503 0.00 1.00 ATOM 141 N GLN 533 37.620 38.710 17.603 0.00 1.00 ATOM 142 CA GLN 533 36.697 37.630 17.734 0.00 1.00 ATOM 143 C GLN 533 37.336 36.435 17.142 0.00 1.00 ATOM 144 CB GLN 533 35.365 37.934 17.043 0.00 1.00 ATOM 145 N LYS 534 37.185 35.304 17.844 0.00 1.00 ATOM 146 CA LYS 534 37.724 34.097 17.331 0.00 1.00 ATOM 147 C LYS 534 36.573 33.177 17.151 0.00 1.00 ATOM 148 CB LYS 534 38.775 33.498 18.266 0.00 1.00 ATOM 149 N ASN 535 36.538 32.509 15.988 0.00 1.00 ATOM 150 CA ASN 535 35.547 31.512 15.740 0.00 1.00 ATOM 151 C ASN 535 35.907 30.269 16.470 0.00 1.00 ATOM 152 CB ASN 535 35.396 31.246 14.254 0.00 1.00 ATOM 153 N LYS 536 34.877 29.516 16.891 0.00 1.00 ATOM 154 CA LYS 536 35.143 28.230 17.445 0.00 1.00 ATOM 155 C LYS 536 35.461 27.352 16.286 0.00 1.00 ATOM 156 CB LYS 536 33.956 27.691 18.245 0.00 1.00 ATOM 157 N ASN 537 36.067 26.186 16.559 0.00 1.00 ATOM 158 CA ASN 537 36.438 25.329 15.477 0.00 1.00 ATOM 159 C ASN 537 37.396 26.087 14.625 0.00 1.00 ATOM 160 CB ASN 537 35.231 24.866 14.684 0.00 1.00 ATOM 161 N GLY 538 38.276 26.875 15.267 0.00 1.00 ATOM 162 CA GLY 538 39.231 27.641 14.531 0.00 1.00 ATOM 163 C GLY 538 40.050 28.377 15.534 0.00 1.00 ATOM 164 CB GLY 538 38.720 28.369 13.917 0.00 1.00 ATOM 165 N GLY 539 40.841 29.349 15.108 0.00 1.00 ATOM 166 CA GLY 539 41.574 29.993 16.151 0.00 1.00 ATOM 167 C GLY 539 42.371 31.001 15.450 0.00 1.00 ATOM 168 CB GLY 539 42.255 29.301 16.628 0.00 1.00 ATOM 169 N SER 540 42.710 30.668 14.207 0.00 1.00 ATOM 170 CA SER 540 43.446 31.594 13.430 0.00 1.00 ATOM 171 C SER 540 42.450 32.533 12.849 0.00 1.00 ATOM 172 CB SER 540 44.240 30.898 12.341 0.00 1.00 ATOM 173 N ASP 541 41.153 32.166 12.934 0.00 1.00 ATOM 174 CA ASP 541 40.158 32.959 12.274 0.00 1.00 ATOM 175 C ASP 541 39.904 34.108 13.175 0.00 1.00 ATOM 176 CB ASP 541 38.871 32.174 12.013 0.00 1.00 ATOM 177 N ASN 542 40.790 35.109 13.098 0.00 1.00 ATOM 178 CA ASN 542 40.646 36.254 13.926 0.00 1.00 ATOM 179 C ASN 542 39.789 37.170 13.139 0.00 1.00 ATOM 180 CB ASN 542 41.979 36.884 14.287 0.00 1.00 ATOM 181 N GLN 543 38.595 37.462 13.672 0.00 1.00 ATOM 182 CA GLN 543 37.678 38.205 12.881 0.00 1.00 ATOM 183 C GLN 543 37.689 39.565 13.442 0.00 1.00 ATOM 184 CB GLN 543 36.269 37.607 12.911 0.00 1.00 ATOM 185 N ASP 544 36.819 40.428 12.877 0.00 1.00 ATOM 186 CA ASP 544 36.892 41.845 13.015 0.00 1.00 ATOM 187 C ASP 544 37.190 42.185 14.422 0.00 1.00 ATOM 188 CB ASP 544 35.584 42.513 12.582 0.00 1.00 ATOM 189 N TYR 545 38.077 43.177 14.554 0.00 1.00 ATOM 190 CA TYR 545 38.474 43.650 15.824 0.00 1.00 ATOM 191 C TYR 545 37.538 44.761 16.096 0.00 1.00 ATOM 192 CB TYR 545 39.933 44.106 15.850 0.00 1.00 ATOM 193 N ARG 546 37.227 44.967 17.377 0.00 1.00 ATOM 194 CA ARG 546 36.571 46.174 17.744 0.00 1.00 ATOM 195 C ARG 546 37.586 46.862 18.589 0.00 1.00 ATOM 196 CB ARG 546 35.279 45.935 18.511 0.00 1.00 ATOM 197 N LYS 547 37.615 48.202 18.559 0.00 1.00 ATOM 198 CA LYS 547 38.536 48.899 19.400 0.00 1.00 ATOM 199 C LYS 547 37.771 49.842 20.263 0.00 1.00 ATOM 200 CB LYS 547 39.583 49.650 18.575 0.00 1.00 ATOM 201 N THR 548 38.184 49.935 21.538 0.00 1.00 ATOM 202 CA THR 548 37.546 50.824 22.453 0.00 1.00 ATOM 203 C THR 548 38.634 51.614 23.085 0.00 1.00 ATOM 204 CB THR 548 36.717 50.083 23.519 0.00 1.00 ATOM 205 N ASN 549 38.328 52.867 23.451 0.00 1.00 ATOM 206 CA ASN 549 39.315 53.664 24.100 0.00 1.00 ATOM 207 C ASN 549 38.836 53.765 25.501 0.00 1.00 ATOM 208 CB ASN 549 39.488 55.025 23.451 0.00 1.00 ATOM 209 N VAL 550 39.748 53.530 26.449 0.00 1.00 ATOM 210 CA VAL 550 39.401 53.607 27.824 0.00 1.00 ATOM 211 C VAL 550 40.137 54.818 28.249 0.00 1.00 ATOM 212 CB VAL 550 39.839 52.365 28.623 0.00 1.00 ATOM 213 N ASN 551 39.435 55.763 28.882 0.00 1.00 ATOM 214 CA ASN 551 40.106 56.963 29.230 0.00 1.00 ATOM 215 C ASN 551 40.685 56.623 30.542 0.00 1.00 ATOM 216 CB ASN 551 39.185 58.168 29.287 0.00 1.00 ATOM 217 N VAL 552 41.711 57.366 30.927 0.00 1.00 ATOM 218 CA VAL 552 42.275 57.138 32.199 0.00 1.00 ATOM 219 C VAL 552 42.041 58.451 32.846 0.00 1.00 ATOM 220 CB VAL 552 43.773 56.783 32.136 0.00 1.00 ATOM 221 N SER 553 41.932 58.457 34.177 0.00 1.00 ATOM 222 CA SER 553 41.713 59.633 34.945 0.00 1.00 ATOM 223 C SER 553 40.271 59.989 35.036 0.00 1.00 ATOM 224 CB SER 553 42.486 60.789 34.342 0.00 1.00 ATOM 225 N LYS 554 39.374 59.335 34.278 0.00 1.00 ATOM 226 CA LYS 554 38.037 59.760 34.540 0.00 1.00 ATOM 227 C LYS 554 37.793 59.092 35.842 0.00 1.00 ATOM 228 CB LYS 554 37.038 59.335 33.462 0.00 1.00 ATOM 229 N ASN 555 38.053 57.778 35.874 0.00 1.00 ATOM 230 CA ASN 555 37.994 57.044 37.093 0.00 1.00 ATOM 231 C ASN 555 39.160 56.137 36.972 0.00 1.00 ATOM 232 CB ASN 555 36.686 56.297 37.281 0.00 1.00 ATOM 233 N VAL 556 40.321 56.642 37.396 0.00 1.00 ATOM 234 CA VAL 556 41.547 55.927 37.249 0.00 1.00 ATOM 235 C VAL 556 41.470 54.689 38.053 0.00 1.00 ATOM 236 CB VAL 556 42.744 56.776 37.712 0.00 1.00 ATOM 237 N SER 557 40.715 54.735 39.163 0.00 1.00 ATOM 238 CA SER 557 40.741 53.604 40.028 0.00 1.00 ATOM 239 C SER 557 40.083 52.526 39.258 0.00 1.00 ATOM 240 CB SER 557 40.017 53.868 41.334 0.00 1.00 ATOM 241 N ASN 558 38.885 52.806 38.738 0.00 1.00 ATOM 242 CA ASN 558 38.275 51.720 38.071 0.00 1.00 ATOM 243 C ASN 558 37.556 52.255 36.894 0.00 1.00 ATOM 244 CB ASN 558 37.344 50.954 38.991 0.00 1.00 ATOM 245 N GLU 559 38.133 52.053 35.703 0.00 1.00 ATOM 246 CA GLU 559 37.506 52.640 34.572 0.00 1.00 ATOM 247 C GLU 559 36.834 51.521 33.864 0.00 1.00 ATOM 248 CB GLU 559 38.514 53.348 33.662 0.00 1.00 ATOM 249 N THR 560 35.552 51.717 33.504 0.00 1.00 ATOM 250 CA THR 560 34.887 50.639 32.854 0.00 1.00 ATOM 251 C THR 560 34.325 51.052 31.543 0.00 1.00 ATOM 252 CB THR 560 33.762 50.072 33.740 0.00 1.00 ATOM 253 N ARG 561 34.494 50.163 30.553 0.00 1.00 ATOM 254 CA ARG 561 33.923 50.376 29.267 0.00 1.00 ATOM 255 C ARG 561 33.209 49.117 28.933 0.00 1.00 ATOM 256 CB ARG 561 34.977 50.693 28.217 0.00 1.00 ATOM 257 N ASN 562 32.367 49.172 27.891 0.00 1.00 ATOM 258 CA ASN 562 31.565 48.036 27.579 0.00 1.00 ATOM 259 C ASN 562 31.671 47.804 26.117 0.00 1.00 ATOM 260 CB ASN 562 30.123 48.230 28.008 0.00 1.00 ATOM 261 N PHE 563 31.880 46.532 25.759 0.00 1.00 ATOM 262 CA PHE 563 31.874 46.117 24.400 0.00 1.00 ATOM 263 C PHE 563 30.469 45.655 24.275 0.00 1.00 ATOM 264 CB PHE 563 32.881 45.006 24.097 0.00 1.00 ATOM 265 N GLU 564 29.740 46.199 23.301 0.00 1.00 ATOM 266 CA GLU 564 28.408 45.739 23.100 0.00 1.00 ATOM 267 C GLU 564 28.462 45.041 21.793 0.00 1.00 ATOM 268 CB GLU 564 27.390 46.882 23.085 0.00 1.00 ATOM 269 N LYS 565 27.355 44.400 21.397 0.00 1.00 ATOM 270 CA LYS 565 27.348 43.719 20.145 0.00 1.00 ATOM 271 C LYS 565 28.327 42.593 20.131 0.00 1.00 ATOM 272 CB LYS 565 27.651 44.694 19.006 0.00 1.00 ATOM 273 N VAL 566 28.468 41.861 21.250 0.00 1.00 ATOM 274 CA VAL 566 29.388 40.765 21.257 0.00 1.00 ATOM 275 C VAL 566 28.543 39.543 21.052 0.00 1.00 ATOM 276 CB VAL 566 30.168 40.676 22.582 0.00 1.00 ATOM 277 N ALA 567 28.962 38.645 20.135 0.00 1.00 ATOM 278 CA ALA 567 28.188 37.465 19.857 0.00 1.00 ATOM 279 C ALA 567 28.406 36.466 20.950 0.00 1.00 ATOM 280 CB ALA 567 28.547 36.803 18.517 0.00 1.00 ATOM 281 N LYS 568 27.391 35.613 21.203 0.00 1.00 ATOM 282 CA LYS 568 27.462 34.679 22.292 0.00 1.00 ATOM 283 C LYS 568 28.327 33.497 21.949 0.00 1.00 ATOM 284 CB LYS 568 26.060 34.211 22.682 0.00 1.00 ATOM 285 N GLY 569 28.102 32.895 20.770 0.00 1.00 ATOM 286 CA GLY 569 28.743 31.663 20.387 0.00 1.00 ATOM 287 C GLY 569 30.233 31.802 20.260 0.00 1.00 ATOM 288 CB GLY 569 28.348 31.393 19.417 0.00 1.00 ATOM 289 N TYR 570 30.721 33.035 20.057 0.00 1.00 ATOM 290 CA TYR 570 32.104 33.319 19.773 0.00 1.00 ATOM 291 C TYR 570 32.972 33.587 20.963 0.00 1.00 ATOM 292 CB TYR 570 32.188 34.510 18.817 0.00 1.00 ATOM 293 N GLN 571 34.289 33.350 20.753 0.00 1.00 ATOM 294 CA GLN 571 35.314 33.518 21.743 0.00 1.00 ATOM 295 C GLN 571 35.890 34.879 21.484 0.00 1.00 ATOM 296 CB GLN 571 36.387 32.428 21.655 0.00 1.00 ATOM 297 N TYR 572 36.184 35.655 22.549 0.00 1.00 ATOM 298 CA TYR 572 36.809 36.929 22.335 0.00 1.00 ATOM 299 C TYR 572 38.009 37.040 23.222 0.00 1.00 ATOM 300 CB TYR 572 35.831 38.075 22.601 0.00 1.00 ATOM 301 N ASP 573 39.118 37.548 22.651 0.00 1.00 ATOM 302 CA ASP 573 40.348 37.747 23.360 0.00 1.00 ATOM 303 C ASP 573 40.496 39.227 23.474 0.00 1.00 ATOM 304 CB ASP 573 41.545 37.126 22.633 0.00 1.00 ATOM 305 N LEU 574 41.121 39.714 24.563 0.00 1.00 ATOM 306 CA LEU 574 41.275 41.130 24.709 0.00 1.00 ATOM 307 C LEU 574 42.734 41.434 24.589 0.00 1.00 ATOM 308 CB LEU 574 40.732 41.614 26.060 0.00 1.00 ATOM 309 N ILE 575 43.083 42.468 23.795 0.00 1.00 ATOM 310 CA ILE 575 44.464 42.823 23.621 0.00 1.00 ATOM 311 C ILE 575 44.632 44.262 24.008 0.00 1.00 ATOM 312 CB ILE 575 44.932 42.606 22.170 0.00 1.00 ATOM 313 N ALA 576 45.580 44.532 24.927 0.00 1.00 ATOM 314 CA ALA 576 45.908 45.875 25.313 0.00 1.00 ATOM 315 C ALA 576 47.175 46.135 24.552 0.00 1.00 ATOM 316 CB ALA 576 46.225 46.025 26.811 0.00 1.00 ATOM 317 N PRO 577 47.281 47.264 23.911 0.00 1.00 ATOM 318 CA PRO 577 48.500 47.548 23.191 0.00 1.00 ATOM 319 C PRO 577 49.628 47.896 24.095 0.00 1.00 ATOM 320 CB PRO 577 48.109 48.739 22.310 0.00 1.00 ATOM 321 N ASP 578 50.808 48.086 23.486 0.00 1.00 ATOM 322 CA ASP 578 52.049 48.457 24.086 0.00 1.00 ATOM 323 C ASP 578 52.133 49.777 24.784 0.00 1.00 ATOM 324 CB ASP 578 53.136 48.421 23.010 0.00 1.00 ATOM 325 N VAL 579 51.733 49.767 26.071 0.00 1.00 ATOM 326 CA VAL 579 52.087 50.816 26.970 0.00 1.00 ATOM 327 C VAL 579 53.476 50.438 27.414 0.00 1.00 ATOM 328 CB VAL 579 51.121 50.914 28.166 0.00 1.00 ATOM 329 N PRO 580 54.444 51.271 27.126 0.00 1.00 ATOM 330 CA PRO 580 55.846 51.001 27.364 0.00 1.00 ATOM 331 C PRO 580 56.302 50.607 28.743 0.00 1.00 ATOM 332 CB PRO 580 56.470 52.345 26.973 0.00 1.00 ATOM 333 N ALA 581 56.086 51.468 29.755 0.00 1.00 ATOM 334 CA ALA 581 56.625 51.305 31.083 0.00 1.00 ATOM 335 C ALA 581 55.827 50.305 31.859 0.00 1.00 ATOM 336 CB ALA 581 56.612 52.613 31.889 0.00 1.00 ATOM 337 N PHE 582 54.686 49.880 31.296 0.00 1.00 ATOM 338 CA PHE 582 53.807 48.991 31.998 0.00 1.00 ATOM 339 C PHE 582 53.686 47.642 31.374 0.00 1.00 ATOM 340 CB PHE 582 52.414 49.613 32.099 0.00 1.00 ATOM 341 N THR 583 53.390 46.666 32.252 0.00 1.00 ATOM 342 CA THR 583 53.224 45.282 31.936 0.00 1.00 ATOM 343 C THR 583 51.736 45.115 31.934 0.00 1.00 ATOM 344 CB THR 583 53.902 44.340 32.948 0.00 1.00 ATOM 345 N LYS 584 51.168 44.338 30.992 0.00 1.00 ATOM 346 CA LYS 584 49.733 44.248 31.005 0.00 1.00 ATOM 347 C LYS 584 49.297 42.843 31.252 0.00 1.00 ATOM 348 CB LYS 584 49.077 44.716 29.693 0.00 1.00 ATOM 349 N GLU 585 48.327 42.688 32.171 0.00 1.00 ATOM 350 CA GLU 585 47.789 41.406 32.494 0.00 1.00 ATOM 351 C GLU 585 46.320 41.503 32.228 0.00 1.00 ATOM 352 CB GLU 585 48.064 41.022 33.950 0.00 1.00 ATOM 353 N ILE 586 45.726 40.442 31.647 0.00 1.00 ATOM 354 CA ILE 586 44.315 40.453 31.391 0.00 1.00 ATOM 355 C ILE 586 43.740 39.259 32.077 0.00 1.00 ATOM 356 CB ILE 586 43.997 40.414 29.885 0.00 1.00 ATOM 357 N LYS 587 42.674 39.473 32.869 0.00 1.00 ATOM 358 CA LYS 587 42.086 38.385 33.595 0.00 1.00 ATOM 359 C LYS 587 40.644 38.308 33.203 0.00 1.00 ATOM 360 CB LYS 587 42.235 38.570 35.105 0.00 1.00 ATOM 361 N ASN 588 40.075 37.086 33.229 0.00 1.00 ATOM 362 CA ASN 588 38.677 36.922 32.947 0.00 1.00 ATOM 363 C ASN 588 38.036 36.615 34.264 0.00 1.00 ATOM 364 CB ASN 588 38.423 35.833 31.921 0.00 1.00 ATOM 365 N VAL 589 37.255 37.588 34.751 0.00 1.00 ATOM 366 CA VAL 589 36.569 37.635 36.008 0.00 1.00 ATOM 367 C VAL 589 35.149 37.167 35.944 0.00 1.00 ATOM 368 CB VAL 589 36.589 39.076 36.552 0.00 1.00 ATOM 369 N GLY 590 34.451 37.350 34.815 0.00 1.00 ATOM 370 CA GLY 590 33.070 36.986 34.867 0.00 1.00 ATOM 371 C GLY 590 32.793 35.561 34.597 0.00 1.00 ATOM 372 CB GLY 590 32.582 37.574 34.102 0.00 1.00 ATOM 373 N THR 591 31.545 35.350 34.154 0.00 1.00 ATOM 374 CA THR 591 31.049 34.044 33.944 0.00 1.00 ATOM 375 C THR 591 31.152 33.808 32.486 0.00 1.00 ATOM 376 CB THR 591 29.599 33.876 34.433 0.00 1.00 ATOM 377 N GLU 592 30.974 32.547 32.073 0.00 1.00 ATOM 378 CA GLU 592 31.117 32.263 30.686 0.00 1.00 ATOM 379 C GLU 592 30.062 33.031 29.972 0.00 1.00 ATOM 380 CB GLU 592 30.986 30.765 30.404 0.00 1.00 ATOM 381 N SER 593 28.881 33.124 30.597 0.00 1.00 ATOM 382 CA SER 593 27.777 33.816 30.005 0.00 1.00 ATOM 383 C SER 593 28.037 35.287 29.985 0.00 1.00 ATOM 384 CB SER 593 26.499 33.522 30.767 0.00 1.00 ATOM 385 N ASN 594 28.594 35.835 31.083 0.00 1.00 ATOM 386 CA ASN 594 28.833 37.248 31.113 0.00 1.00 ATOM 387 C ASN 594 30.246 37.441 31.528 0.00 1.00 ATOM 388 CB ASN 594 27.874 37.968 32.044 0.00 1.00 ATOM 389 N PRO 595 31.140 37.328 30.597 0.00 1.00 ATOM 390 CA PRO 595 32.509 37.515 30.937 0.00 1.00 ATOM 391 C PRO 595 32.835 38.928 31.238 0.00 1.00 ATOM 392 CB PRO 595 33.237 37.032 29.678 0.00 1.00 ATOM 393 N SER 596 33.732 39.135 32.208 0.00 1.00 ATOM 394 CA SER 596 34.178 40.452 32.489 0.00 1.00 ATOM 395 C SER 596 35.658 40.344 32.424 0.00 1.00 ATOM 396 CB SER 596 33.711 40.936 33.848 0.00 1.00 ATOM 397 N PHE 597 36.311 41.333 31.799 0.00 1.00 ATOM 398 CA PHE 597 37.728 41.249 31.666 0.00 1.00 ATOM 399 C PHE 597 38.295 42.363 32.471 0.00 1.00 ATOM 400 CB PHE 597 38.169 41.358 30.204 0.00 1.00 ATOM 401 N LYS 598 39.452 42.108 33.105 0.00 1.00 ATOM 402 CA LYS 598 40.077 43.107 33.908 0.00 1.00 ATOM 403 C LYS 598 41.439 43.249 33.332 0.00 1.00 ATOM 404 CB LYS 598 40.126 42.723 35.387 0.00 1.00 ATOM 405 N VAL 599 41.860 44.495 33.073 0.00 1.00 ATOM 406 CA VAL 599 43.166 44.713 32.538 0.00 1.00 ATOM 407 C VAL 599 43.907 45.349 33.658 0.00 1.00 ATOM 408 CB VAL 599 43.148 45.627 31.299 0.00 1.00 ATOM 409 N ILE 600 45.084 44.802 33.987 0.00 1.00 ATOM 410 CA ILE 600 45.808 45.336 35.089 0.00 1.00 ATOM 411 C ILE 600 47.074 45.850 34.509 0.00 1.00 ATOM 412 CB ILE 600 46.087 44.284 36.179 0.00 1.00 ATOM 413 N TYR 601 47.399 47.115 34.816 0.00 1.00 ATOM 414 CA TYR 601 48.620 47.668 34.332 0.00 1.00 ATOM 415 C TYR 601 49.525 47.669 35.505 0.00 1.00 ATOM 416 CB TYR 601 48.435 49.073 33.756 0.00 1.00 ATOM 417 N LYS 602 50.749 47.160 35.312 0.00 1.00 ATOM 418 CA LYS 602 51.685 47.153 36.386 0.00 1.00 ATOM 419 C LYS 602 52.858 47.924 35.901 0.00 1.00 ATOM 420 CB LYS 602 52.080 45.734 36.796 0.00 1.00 ATOM 421 N GLN 603 53.614 48.515 36.840 0.00 1.00 ATOM 422 CA GLN 603 54.678 49.374 36.443 0.00 1.00 ATOM 423 C GLN 603 55.958 48.741 36.846 0.00 1.00 ATOM 424 CB GLN 603 54.539 50.762 37.074 0.00 1.00 ATOM 425 N LEU 604 56.952 48.789 35.947 0.00 1.00 ATOM 426 CA LEU 604 58.205 48.207 36.285 0.00 1.00 ATOM 427 C LEU 604 59.120 49.384 36.330 0.00 1.00 ATOM 428 CB LEU 604 58.662 47.169 35.254 0.00 1.00 TER END