####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 114 ( 456), selected 114 , name T1038TS217_1-D1 # Molecule2: number of CA atoms 114 ( 891), selected 114 , name T1038-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1038TS217_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 53 9 - 61 4.72 13.64 LCS_AVERAGE: 38.37 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 20 - 53 1.90 13.14 LONGEST_CONTINUOUS_SEGMENT: 34 21 - 54 1.98 13.17 LONGEST_CONTINUOUS_SEGMENT: 34 22 - 55 1.94 13.20 LONGEST_CONTINUOUS_SEGMENT: 34 23 - 56 1.80 13.29 LCS_AVERAGE: 15.23 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 23 - 41 0.97 13.40 LCS_AVERAGE: 7.20 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 114 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 9 V 9 3 4 53 3 3 4 6 6 7 8 11 11 12 12 13 13 15 15 25 25 33 33 50 LCS_GDT S 10 S 10 3 4 53 3 3 4 6 7 8 16 16 18 27 38 45 48 50 52 57 61 65 68 68 LCS_GDT D 11 D 11 3 4 53 3 3 3 21 25 33 36 37 38 41 44 47 52 53 57 59 61 65 69 73 LCS_GDT L 12 L 12 3 9 53 3 4 22 28 32 34 38 39 42 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT P 13 P 13 3 9 53 3 4 5 15 25 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT N 14 N 14 6 9 53 3 4 14 22 29 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT N 15 N 15 6 9 53 3 4 9 19 27 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT C 16 C 16 6 9 53 3 4 8 13 21 31 35 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT L 17 L 17 6 9 53 3 4 9 14 21 23 31 38 41 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT N 18 N 18 6 9 53 3 4 7 10 19 23 26 31 39 44 47 49 53 56 59 60 62 66 70 73 LCS_GDT A 19 A 19 6 9 53 0 4 7 10 19 23 26 31 40 44 48 50 53 56 59 60 62 66 70 73 LCS_GDT S 20 S 20 3 34 53 0 3 8 15 24 27 35 39 43 45 48 50 53 56 59 60 62 66 70 72 LCS_GDT S 21 S 21 3 34 53 3 7 15 23 29 32 37 40 43 45 48 50 53 56 59 60 62 65 68 72 LCS_GDT L 22 L 22 3 34 53 3 3 5 5 22 30 37 40 43 45 48 50 53 56 59 60 62 66 70 72 LCS_GDT K 23 K 23 19 34 53 6 16 23 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT C 24 C 24 19 34 53 8 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT E 25 E 25 19 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT I 26 I 26 19 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT K 27 K 27 19 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT G 28 G 28 19 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT I 29 I 29 19 34 53 8 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT S 30 S 30 19 34 53 10 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT T 31 T 31 19 34 53 5 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT Y 32 Y 32 19 34 53 10 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT N 33 N 33 19 34 53 8 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT V 34 V 34 19 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT Y 35 Y 35 19 34 53 8 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT Y 36 Y 36 19 34 53 7 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT Q 37 Q 37 19 34 53 10 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT V 38 V 38 19 34 53 7 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT E 39 E 39 19 34 53 6 13 22 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT N 40 N 40 19 34 53 6 13 22 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT N 41 N 41 19 34 53 6 13 22 28 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 72 LCS_GDT G 42 G 42 14 34 53 6 12 17 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 72 LCS_GDT V 43 V 43 14 34 53 6 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT I 44 I 44 14 34 53 6 12 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT Y 45 Y 45 14 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT S 46 S 46 14 34 53 6 16 23 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT C 47 C 47 14 34 53 7 14 23 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT V 48 V 48 14 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT S 49 S 49 11 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT D 50 D 50 11 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT S 51 S 51 11 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT A 52 A 52 11 34 53 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT E 53 E 53 11 34 53 8 19 24 27 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT G 54 G 54 4 34 53 3 4 6 8 23 27 36 36 39 43 48 50 53 55 59 60 62 66 70 73 LCS_GDT L 55 L 55 4 34 53 4 4 14 21 31 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT E 56 E 56 4 34 53 4 4 14 21 29 34 38 39 42 45 48 50 53 56 59 60 62 66 70 73 LCS_GDT K 57 K 57 4 8 53 4 4 4 7 10 16 26 33 38 39 40 43 51 55 57 59 61 66 70 73 LCS_GDT C 58 C 58 4 8 53 4 4 4 8 11 16 23 33 38 39 40 47 52 55 57 59 62 66 70 73 LCS_GDT D 59 D 59 4 8 53 3 3 4 6 12 16 22 32 38 39 40 44 50 54 56 58 61 66 70 73 LCS_GDT N 60 N 60 4 5 53 3 3 4 5 8 9 13 18 19 23 29 37 38 43 49 55 60 66 70 73 LCS_GDT S 61 S 61 4 8 53 3 3 5 6 7 11 14 16 19 20 25 29 35 41 49 55 59 66 70 73 LCS_GDT L 62 L 62 7 10 52 4 6 7 8 14 15 17 17 19 20 23 26 31 35 40 46 49 52 57 65 LCS_GDT N 63 N 63 7 10 40 4 6 7 8 14 15 17 17 19 20 23 26 31 35 40 46 49 52 57 62 LCS_GDT L 64 L 64 7 10 27 4 6 7 8 14 15 17 17 19 20 23 26 30 34 37 43 47 57 66 71 LCS_GDT P 65 P 65 7 10 27 4 6 7 7 14 15 17 17 19 20 23 25 28 32 36 40 52 63 66 73 LCS_GDT K 66 K 66 7 10 27 4 6 7 7 13 15 17 17 19 20 23 29 37 43 49 54 59 66 70 73 LCS_GDT R 67 R 67 7 10 27 3 6 7 8 14 15 17 17 19 20 25 28 38 41 49 54 59 66 70 73 LCS_GDT F 68 F 68 7 10 27 3 3 7 8 14 15 17 17 19 20 21 24 32 40 44 53 59 64 70 73 LCS_GDT S 69 S 69 3 10 27 3 4 6 8 14 15 17 17 19 20 21 24 36 41 49 54 59 66 70 73 LCS_GDT K 70 K 70 4 10 27 3 3 4 8 14 15 17 18 23 31 35 38 44 52 52 56 60 66 70 73 LCS_GDT V 71 V 71 6 10 27 3 5 6 8 12 15 17 17 19 20 20 23 28 32 44 53 58 66 70 73 LCS_GDT P 72 P 72 6 10 27 3 5 6 8 10 10 14 17 19 20 20 23 25 30 41 53 58 60 66 73 LCS_GDT V 73 V 73 6 10 27 3 5 6 8 14 15 17 17 19 20 21 26 34 43 51 55 60 66 70 73 LCS_GDT I 74 I 74 6 10 27 3 5 6 8 14 15 19 26 29 31 33 35 38 43 51 55 60 66 70 73 LCS_GDT P 75 P 75 6 10 27 3 5 6 8 14 15 19 25 29 31 33 35 45 50 53 56 60 66 70 73 LCS_GDT I 76 I 76 6 10 27 3 4 6 8 14 15 17 18 19 22 29 34 45 50 53 56 60 66 70 73 LCS_GDT T 77 T 77 5 10 27 3 4 6 8 14 15 16 18 19 20 24 34 45 50 53 56 60 66 70 73 LCS_GDT K 78 K 78 5 10 27 3 4 5 8 14 15 17 18 19 21 27 34 45 50 53 56 60 66 70 73 LCS_GDT L 79 L 79 3 9 27 3 4 5 6 11 15 17 18 19 21 27 31 34 43 51 55 59 63 67 73 LCS_GDT D 80 D 80 4 9 27 3 4 5 7 13 15 17 18 19 20 24 27 33 38 43 44 58 61 66 73 LCS_GDT N 81 N 81 4 6 27 3 4 5 6 8 11 14 18 19 20 27 30 33 39 43 48 58 61 66 73 LCS_GDT K 82 K 82 4 6 39 3 4 4 5 5 7 10 14 23 26 30 35 42 46 49 55 60 63 66 73 LCS_GDT R 83 R 83 4 6 39 3 4 5 6 8 10 14 18 20 21 27 30 33 39 43 47 51 60 65 71 LCS_GDT H 84 H 84 3 8 39 3 3 5 7 11 13 16 22 26 30 32 35 38 39 43 48 50 56 65 71 LCS_GDT F 85 F 85 3 8 39 3 3 5 6 10 13 19 26 29 31 33 35 38 39 43 48 58 61 66 73 LCS_GDT S 86 S 86 3 8 39 3 3 5 7 11 15 21 26 29 31 33 40 45 50 53 56 60 66 70 73 LCS_GDT V 87 V 87 3 10 39 1 5 12 14 17 19 21 26 29 31 33 40 45 50 53 57 61 65 70 73 LCS_GDT G 88 G 88 5 11 39 4 5 8 12 15 18 21 26 29 31 34 44 53 53 56 60 61 66 70 73 LCS_GDT T 89 T 89 5 11 39 4 5 13 14 16 19 21 26 29 37 46 50 53 55 59 60 62 66 70 73 LCS_GDT K 90 K 90 5 11 39 4 8 13 14 17 19 21 27 39 43 48 50 53 56 59 60 62 66 70 73 LCS_GDT F 91 F 91 5 11 39 4 10 13 14 17 19 21 26 31 45 48 50 53 56 59 60 62 66 70 72 LCS_GDT F 92 F 92 6 11 39 5 6 12 16 20 26 36 40 43 45 48 50 53 56 59 60 62 65 68 71 LCS_GDT I 93 I 93 6 11 39 5 10 13 16 20 26 31 37 43 45 48 50 53 56 59 60 62 65 68 70 LCS_GDT S 94 S 94 6 11 39 5 10 13 14 17 19 21 26 34 34 48 50 53 56 59 60 62 64 65 67 LCS_GDT E 95 E 95 6 11 39 5 6 12 14 17 19 21 26 29 31 38 43 44 47 50 53 56 57 59 63 LCS_GDT S 96 S 96 6 11 39 3 6 12 14 17 19 21 26 29 31 33 35 38 39 42 48 50 54 56 63 LCS_GDT L 97 L 97 6 11 39 3 5 7 8 10 18 20 22 29 31 33 35 38 39 40 40 41 43 44 45 LCS_GDT T 98 T 98 6 11 39 3 5 8 14 16 19 21 26 29 31 33 35 38 39 40 40 41 43 44 45 LCS_GDT Q 99 Q 99 4 11 39 3 4 6 8 11 15 19 23 28 31 33 35 38 39 40 40 41 43 47 57 LCS_GDT D 100 D 100 4 11 39 3 4 7 8 12 15 21 26 29 31 33 35 38 39 40 48 50 54 56 60 LCS_GDT N 101 N 101 4 11 39 3 4 4 8 9 12 13 15 20 26 32 35 38 39 42 48 50 54 57 60 LCS_GDT Y 102 Y 102 4 11 39 3 4 7 8 9 12 13 15 19 26 32 35 38 39 40 40 45 51 57 60 LCS_GDT P 103 P 103 4 11 39 3 4 7 8 9 12 13 16 19 26 32 34 38 39 40 40 41 43 49 53 LCS_GDT I 104 I 104 4 9 39 3 4 8 10 12 15 21 26 29 31 33 35 38 39 40 40 44 47 49 53 LCS_GDT T 105 T 105 4 9 39 3 4 6 10 12 13 20 26 29 31 33 35 38 39 40 40 41 43 44 45 LCS_GDT Y 106 Y 106 4 9 39 3 4 5 7 9 12 12 15 20 28 32 35 38 39 40 40 41 43 44 45 LCS_GDT N 107 N 107 4 8 39 3 4 5 8 9 12 14 18 20 27 32 35 38 39 40 40 41 43 44 45 LCS_GDT S 108 S 108 4 7 39 4 4 5 7 11 13 18 26 29 31 33 35 38 39 40 40 41 43 44 45 LCS_GDT Y 109 Y 109 4 5 39 4 4 5 7 11 13 20 26 29 31 33 35 38 39 40 40 45 54 66 71 LCS_GDT P 110 P 110 4 5 39 4 4 5 7 11 15 20 26 29 31 33 35 50 54 57 59 61 65 68 71 LCS_GDT T 111 T 111 5 11 39 4 4 6 14 16 19 21 23 29 40 48 50 53 56 59 60 62 65 68 71 LCS_GDT N 112 N 112 8 11 39 4 10 13 14 17 19 21 23 29 43 48 50 53 56 59 60 62 64 65 67 LCS_GDT G 113 G 113 8 11 39 5 10 13 14 17 19 21 26 29 31 48 50 53 56 59 60 62 64 65 67 LCS_GDT T 114 T 114 8 11 39 5 10 13 14 17 19 21 26 29 31 33 35 40 53 56 60 62 63 65 67 LCS_GDT V 115 V 115 8 11 39 5 10 13 14 17 19 21 26 29 31 33 49 51 55 58 60 62 64 65 67 LCS_GDT C 116 C 116 8 11 39 4 8 13 14 17 19 21 26 29 31 41 50 53 56 59 60 62 64 65 67 LCS_GDT L 117 L 117 8 11 39 3 10 13 14 17 19 21 26 29 31 48 50 53 56 59 60 62 64 65 67 LCS_GDT Q 118 Q 118 8 11 39 3 10 13 14 17 24 31 37 43 45 48 50 53 56 59 60 62 64 66 70 LCS_GDT T 119 T 119 8 11 39 4 10 13 14 20 26 36 40 43 45 48 50 53 56 59 60 62 66 70 72 LCS_GDT V 120 V 120 6 11 39 4 5 10 14 22 32 38 39 42 45 48 50 53 55 59 60 62 66 70 73 LCS_GDT K 121 K 121 6 11 39 4 7 11 14 17 19 19 21 23 31 35 44 46 53 56 58 61 66 70 73 LCS_GDT L 122 L 122 6 11 39 4 5 6 6 8 15 17 19 21 26 30 40 42 46 50 56 60 63 68 73 LCS_AVERAGE LCS_A: 20.27 ( 7.20 15.23 38.37 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 19 24 29 32 34 38 40 43 45 48 50 53 56 59 60 62 66 70 73 GDT PERCENT_AT 9.65 16.67 21.05 25.44 28.07 29.82 33.33 35.09 37.72 39.47 42.11 43.86 46.49 49.12 51.75 52.63 54.39 57.89 61.40 64.04 GDT RMS_LOCAL 0.32 0.55 0.81 1.25 1.41 1.64 2.07 2.40 2.69 2.79 3.11 3.27 3.54 4.06 4.31 4.60 4.72 6.19 6.56 7.30 GDT RMS_ALL_AT 12.99 12.99 13.07 13.09 13.21 13.27 13.14 13.09 13.12 13.05 12.99 12.99 12.96 13.23 13.06 13.13 13.11 13.50 13.59 13.92 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA V 9 V 9 14.390 3 0.469 0.469 15.704 0.000 0.000 - LGA S 10 S 10 8.608 2 0.623 0.623 10.692 0.000 0.000 - LGA D 11 D 11 8.722 4 0.425 0.425 8.722 0.000 0.000 - LGA L 12 L 12 3.947 4 0.628 0.628 5.742 25.000 12.500 - LGA P 13 P 13 3.204 3 0.405 0.405 4.997 16.364 9.351 - LGA N 14 N 14 3.502 4 0.651 0.651 3.712 22.727 11.364 - LGA N 15 N 15 3.207 4 0.225 0.225 4.452 15.455 7.727 - LGA C 16 C 16 4.095 2 0.090 0.090 5.442 4.545 3.030 - LGA L 17 L 17 5.390 4 0.257 0.257 7.567 0.455 0.227 - LGA N 18 N 18 7.138 4 0.470 0.470 7.138 0.000 0.000 - LGA A 19 A 19 6.412 1 0.621 0.621 6.852 0.000 0.000 - LGA S 20 S 20 5.151 2 0.666 0.666 5.730 5.909 3.939 - LGA S 21 S 21 3.003 2 0.233 0.233 5.298 21.818 14.545 - LGA L 22 L 22 3.509 4 0.616 0.616 3.509 23.636 11.818 - LGA K 23 K 23 1.353 5 0.550 0.550 1.353 82.273 36.566 - LGA C 24 C 24 1.588 2 0.099 0.099 2.118 51.364 34.242 - LGA E 25 E 25 1.875 5 0.117 0.117 2.287 44.545 19.798 - LGA I 26 I 26 1.631 4 0.107 0.107 2.640 45.000 22.500 - LGA K 27 K 27 2.038 5 0.022 0.022 2.055 44.545 19.798 - LGA G 28 G 28 1.873 0 0.060 0.060 1.873 58.182 58.182 - LGA I 29 I 29 1.231 4 0.041 0.041 2.309 51.364 25.682 - LGA S 30 S 30 2.203 2 0.061 0.061 2.203 55.455 36.970 - LGA T 31 T 31 2.317 3 0.052 0.052 2.482 44.545 25.455 - LGA Y 32 Y 32 1.981 8 0.067 0.067 2.080 44.545 14.848 - LGA N 33 N 33 2.249 4 0.149 0.149 2.249 44.545 22.273 - LGA V 34 V 34 1.021 3 0.026 0.026 1.209 69.545 39.740 - LGA Y 35 Y 35 0.821 8 0.064 0.064 1.259 73.636 24.545 - LGA Y 36 Y 36 1.719 8 0.129 0.129 1.719 61.818 20.606 - LGA Q 37 Q 37 0.987 5 0.075 0.075 1.410 77.727 34.545 - LGA V 38 V 38 0.574 3 0.091 0.091 0.574 90.909 51.948 - LGA E 39 E 39 1.119 5 0.143 0.143 2.229 62.727 27.879 - LGA N 40 N 40 0.972 4 0.131 0.131 1.061 77.727 38.864 - LGA N 41 N 41 1.714 4 0.096 0.096 1.893 50.909 25.455 - LGA G 42 G 42 2.599 0 0.076 0.076 2.982 32.727 32.727 - LGA V 43 V 43 1.841 3 0.035 0.035 1.841 58.636 33.506 - LGA I 44 I 44 1.864 4 0.078 0.078 2.149 44.545 22.273 - LGA Y 45 Y 45 1.704 8 0.044 0.044 1.747 58.182 19.394 - LGA S 46 S 46 1.954 2 0.080 0.080 2.095 47.727 31.818 - LGA C 47 C 47 1.819 2 0.104 0.104 1.954 54.545 36.364 - LGA V 48 V 48 0.915 3 0.141 0.141 2.185 62.727 35.844 - LGA S 49 S 49 1.604 2 0.065 0.065 1.739 58.182 38.788 - LGA D 50 D 50 2.475 4 0.092 0.092 2.953 32.727 16.364 - LGA S 51 S 51 2.436 2 0.026 0.026 2.436 44.545 29.697 - LGA A 52 A 52 1.462 1 0.204 0.204 1.908 54.545 43.636 - LGA E 53 E 53 2.902 5 0.611 0.611 3.604 23.182 10.303 - LGA G 54 G 54 6.795 0 0.334 0.334 6.795 0.000 0.000 - LGA L 55 L 55 4.283 4 0.281 0.281 5.181 1.818 0.909 - LGA E 56 E 56 5.789 5 0.031 0.031 8.507 0.000 0.000 - LGA K 57 K 57 10.737 5 0.180 0.180 11.632 0.000 0.000 - LGA C 58 C 58 9.682 2 0.582 0.582 11.769 0.000 0.000 - LGA D 59 D 59 11.099 4 0.614 0.614 12.675 0.000 0.000 - LGA N 60 N 60 16.083 4 0.552 0.552 16.807 0.000 0.000 - LGA S 61 S 61 17.134 2 0.673 0.673 18.075 0.000 0.000 - LGA L 62 L 62 21.631 4 0.504 0.504 23.008 0.000 0.000 - LGA N 63 N 63 20.409 4 0.150 0.150 20.570 0.000 0.000 - LGA L 64 L 64 18.664 4 0.079 0.079 19.125 0.000 0.000 - LGA P 65 P 65 17.490 3 0.116 0.116 17.981 0.000 0.000 - LGA K 66 K 66 16.287 5 0.605 0.605 16.499 0.000 0.000 - LGA R 67 R 67 16.530 7 0.631 0.631 17.986 0.000 0.000 - LGA F 68 F 68 15.855 7 0.380 0.380 15.855 0.000 0.000 - LGA S 69 S 69 14.429 2 0.059 0.059 14.953 0.000 0.000 - LGA K 70 K 70 13.160 5 0.385 0.385 14.997 0.000 0.000 - LGA V 71 V 71 15.464 3 0.077 0.077 15.464 0.000 0.000 - LGA P 72 P 72 15.950 3 0.028 0.028 16.363 0.000 0.000 - LGA V 73 V 73 13.801 3 0.104 0.104 14.344 0.000 0.000 - LGA I 74 I 74 15.078 4 0.152 0.152 15.078 0.000 0.000 - LGA P 75 P 75 13.101 3 0.086 0.086 15.996 0.000 0.000 - LGA I 76 I 76 15.186 4 0.142 0.142 15.186 0.000 0.000 - LGA T 77 T 77 15.475 3 0.676 0.676 16.468 0.000 0.000 - LGA K 78 K 78 18.050 5 0.251 0.251 19.735 0.000 0.000 - LGA L 79 L 79 19.928 4 0.520 0.520 20.885 0.000 0.000 - LGA D 80 D 80 23.352 4 0.682 0.682 25.924 0.000 0.000 - LGA N 81 N 81 24.920 4 0.343 0.343 25.763 0.000 0.000 - LGA K 82 K 82 21.406 5 0.587 0.587 22.756 0.000 0.000 - LGA R 83 R 83 24.117 7 0.580 0.580 24.176 0.000 0.000 - LGA H 84 H 84 24.299 6 0.543 0.543 24.564 0.000 0.000 - LGA F 85 F 85 20.722 7 0.725 0.725 21.530 0.000 0.000 - LGA S 86 S 86 15.176 2 0.071 0.071 16.668 0.000 0.000 - LGA V 87 V 87 13.910 3 0.178 0.178 14.188 0.000 0.000 - LGA G 88 G 88 10.383 0 0.352 0.352 10.861 0.000 0.000 - LGA T 89 T 89 7.990 3 0.106 0.106 9.983 0.000 0.000 - LGA K 90 K 90 6.653 5 0.076 0.076 6.653 0.000 0.000 - LGA F 91 F 91 6.706 7 0.078 0.078 6.841 0.000 0.000 - LGA F 92 F 92 4.180 7 0.193 0.193 7.360 1.818 0.661 - LGA I 93 I 93 5.488 4 0.163 0.163 7.859 1.364 0.682 - LGA S 94 S 94 11.356 2 0.178 0.178 12.877 0.000 0.000 - LGA E 95 E 95 16.325 5 0.103 0.103 20.217 0.000 0.000 - LGA S 96 S 96 21.820 2 0.205 0.205 24.297 0.000 0.000 - LGA L 97 L 97 28.060 4 0.214 0.214 31.429 0.000 0.000 - LGA T 98 T 98 31.804 3 0.252 0.252 32.523 0.000 0.000 - LGA Q 99 Q 99 28.269 5 0.154 0.154 28.652 0.000 0.000 - LGA D 100 D 100 26.372 4 0.074 0.074 27.003 0.000 0.000 - LGA N 101 N 101 22.020 4 0.611 0.611 23.487 0.000 0.000 - LGA Y 102 Y 102 19.812 8 0.042 0.042 20.480 0.000 0.000 - LGA P 103 P 103 18.365 3 0.096 0.096 18.733 0.000 0.000 - LGA I 104 I 104 16.770 4 0.192 0.192 17.304 0.000 0.000 - LGA T 105 T 105 17.459 3 0.191 0.191 18.889 0.000 0.000 - LGA Y 106 Y 106 20.055 8 0.101 0.101 21.069 0.000 0.000 - LGA N 107 N 107 23.368 4 0.202 0.202 23.368 0.000 0.000 - LGA S 108 S 108 19.432 2 0.462 0.462 20.823 0.000 0.000 - LGA Y 109 Y 109 14.453 8 0.036 0.036 16.252 0.000 0.000 - LGA P 110 P 110 10.204 3 0.096 0.096 11.586 0.000 0.000 - LGA T 111 T 111 7.641 3 0.396 0.396 10.916 0.000 0.000 - LGA N 112 N 112 10.155 4 0.657 0.657 10.668 0.000 0.000 - LGA G 113 G 113 11.358 0 0.109 0.109 13.674 0.000 0.000 - LGA T 114 T 114 14.005 3 0.074 0.074 14.005 0.000 0.000 - LGA V 115 V 115 12.101 3 0.056 0.056 14.282 0.000 0.000 - LGA C 116 C 116 10.694 2 0.110 0.110 10.737 0.000 0.000 - LGA L 117 L 117 9.282 4 0.055 0.055 10.116 0.000 0.000 - LGA Q 118 Q 118 6.539 5 0.162 0.162 6.970 0.000 0.000 - LGA T 119 T 119 4.807 3 0.289 0.289 5.608 1.818 1.039 - LGA V 120 V 120 5.378 3 0.175 0.175 6.771 2.727 1.558 - LGA K 121 K 121 10.808 5 0.150 0.150 13.880 0.000 0.000 - LGA L 122 L 122 16.031 4 0.106 0.106 17.726 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 114 456 456 100.00 891 456 51.18 114 0 SUMMARY(RMSD_GDC): 11.619 11.570 11.570 16.220 8.859 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 114 114 4.0 40 2.40 32.456 28.926 1.603 LGA_LOCAL RMSD: 2.396 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.087 Number of assigned atoms: 114 Std_ASGN_ATOMS RMSD: 11.619 Standard rmsd on all 114 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.172524 * X + 0.984020 * Y + 0.044050 * Z + 10.002851 Y_new = 0.226555 * X + -0.083163 * Y + 0.970442 * Z + -30.010832 Z_new = 0.958597 * X + -0.157444 * Y + -0.237282 * Z + -24.422430 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.919970 -1.282034 -2.555763 [DEG: 52.7104 -73.4552 -146.4344 ] ZXZ: 3.096232 1.810363 1.733587 [DEG: 177.4010 103.7262 99.3272 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1038TS217_1-D1 REMARK 2: T1038-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1038TS217_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 114 114 4.0 40 2.40 28.926 11.62 REMARK ---------------------------------------------------------- MOLECULE T1038TS217_1-D1 PFRMAT TS TARGET T1038 MODEL 1 PARENT N/A ATOM 33 N VAL 9 -10.396 -20.535 -14.634 1.00 0.81 ATOM 34 CA VAL 9 -11.721 -20.895 -14.435 1.00 0.81 ATOM 35 C VAL 9 -11.984 -22.032 -15.505 1.00 0.81 ATOM 36 O VAL 9 -12.623 -23.035 -15.193 1.00 0.81 ATOM 37 N SER 10 -11.410 -21.718 -16.728 1.00 0.78 ATOM 38 CA SER 10 -11.492 -22.618 -17.795 1.00 0.78 ATOM 39 C SER 10 -10.838 -23.926 -17.526 1.00 0.78 ATOM 40 O SER 10 -11.172 -24.924 -18.162 1.00 0.78 ATOM 41 N ASP 11 -9.861 -23.857 -16.508 1.00 0.71 ATOM 42 CA ASP 11 -9.106 -24.961 -16.124 1.00 0.71 ATOM 43 C ASP 11 -9.836 -26.131 -15.625 1.00 0.71 ATOM 44 O ASP 11 -9.550 -27.255 -16.032 1.00 0.71 ATOM 45 N LEU 12 -10.881 -26.043 -14.683 1.00 0.00 ATOM 46 CA LEU 12 -11.436 -27.270 -14.358 1.00 0.00 ATOM 47 C LEU 12 -12.684 -27.274 -15.249 1.00 0.00 ATOM 48 O LEU 12 -13.600 -26.485 -15.029 1.00 0.00 ATOM 49 N PRO 13 -12.709 -28.155 -16.227 1.00 0.80 ATOM 50 CA PRO 13 -13.588 -27.803 -17.330 1.00 0.80 ATOM 51 C PRO 13 -15.005 -28.031 -16.893 1.00 0.80 ATOM 52 O PRO 13 -15.677 -28.917 -17.417 1.00 0.80 ATOM 53 N ASN 14 -15.631 -27.267 -15.897 1.00 0.71 ATOM 54 CA ASN 14 -16.258 -27.971 -14.685 1.00 0.71 ATOM 55 C ASN 14 -17.063 -29.310 -15.119 1.00 0.71 ATOM 56 O ASN 14 -17.747 -29.314 -16.139 1.00 0.71 ATOM 57 N ASN 15 -16.868 -30.268 -14.267 1.00 0.04 ATOM 58 CA ASN 15 -17.608 -31.511 -14.030 1.00 0.04 ATOM 59 C ASN 15 -18.335 -31.285 -12.803 1.00 0.04 ATOM 60 O ASN 15 -18.856 -32.229 -12.212 1.00 0.04 ATOM 61 N CYS 16 -18.440 -30.084 -12.329 1.00 0.57 ATOM 62 CA CYS 16 -19.553 -29.533 -11.712 1.00 0.57 ATOM 63 C CYS 16 -20.639 -29.624 -12.919 1.00 0.57 ATOM 64 O CYS 16 -21.841 -29.568 -12.671 1.00 0.57 ATOM 65 N LEU 17 -20.147 -29.771 -14.183 1.00 0.89 ATOM 66 CA LEU 17 -20.971 -29.444 -15.429 1.00 0.89 ATOM 67 C LEU 17 -21.326 -30.777 -16.289 1.00 0.89 ATOM 68 O LEU 17 -22.173 -30.728 -17.179 1.00 0.89 ATOM 69 N ASN 18 -20.671 -32.009 -16.020 1.00 0.38 ATOM 70 CA ASN 18 -21.483 -33.257 -16.111 1.00 0.38 ATOM 71 C ASN 18 -22.419 -33.654 -14.910 1.00 0.38 ATOM 72 O ASN 18 -23.000 -34.737 -14.913 1.00 0.38 ATOM 73 N ALA 19 -22.456 -32.750 -14.052 1.00 0.41 ATOM 74 CA ALA 19 -23.063 -32.794 -12.789 1.00 0.41 ATOM 75 C ALA 19 -24.487 -32.289 -12.661 1.00 0.41 ATOM 76 O ALA 19 -24.966 -31.567 -13.532 1.00 0.41 ATOM 77 N SER 20 -25.057 -32.704 -11.572 1.00 0.38 ATOM 78 CA SER 20 -26.432 -32.504 -11.082 1.00 0.38 ATOM 79 C SER 20 -26.576 -31.338 -10.244 1.00 0.38 ATOM 80 O SER 20 -25.593 -30.656 -9.964 1.00 0.38 ATOM 81 N SER 21 -27.895 -31.122 -9.824 1.00 0.78 ATOM 82 CA SER 21 -28.092 -30.284 -8.726 1.00 0.78 ATOM 83 C SER 21 -27.368 -31.041 -7.482 1.00 0.78 ATOM 84 O SER 21 -26.774 -30.389 -6.627 1.00 0.78 ATOM 85 N LEU 22 -27.527 -32.428 -7.569 1.00 0.32 ATOM 86 CA LEU 22 -27.357 -33.209 -6.402 1.00 0.32 ATOM 87 C LEU 22 -26.034 -33.205 -5.828 1.00 0.32 ATOM 88 O LEU 22 -25.890 -33.312 -4.612 1.00 0.32 ATOM 89 N LYS 23 -25.043 -33.086 -6.584 1.00 0.47 ATOM 90 CA LYS 23 -23.654 -33.209 -6.292 1.00 0.47 ATOM 91 C LYS 23 -23.189 -31.851 -5.750 1.00 0.47 ATOM 92 O LYS 23 -22.011 -31.681 -5.444 1.00 0.47 ATOM 93 N CYS 24 -24.192 -30.915 -5.650 1.00 0.78 ATOM 94 CA CYS 24 -23.891 -29.460 -5.513 1.00 0.78 ATOM 95 C CYS 24 -24.091 -28.935 -4.144 1.00 0.78 ATOM 96 O CYS 24 -25.175 -29.076 -3.582 1.00 0.78 ATOM 97 N GLU 25 -23.103 -28.299 -3.501 1.00 0.17 ATOM 98 CA GLU 25 -23.348 -27.702 -2.198 1.00 0.17 ATOM 99 C GLU 25 -22.982 -26.265 -2.142 1.00 0.17 ATOM 100 O GLU 25 -22.053 -25.840 -2.825 1.00 0.17 ATOM 101 N ILE 26 -23.624 -25.395 -1.363 1.00 0.19 ATOM 102 CA ILE 26 -22.884 -24.078 -1.153 1.00 0.19 ATOM 103 C ILE 26 -22.445 -23.860 0.277 1.00 0.19 ATOM 104 O ILE 26 -23.285 -23.755 1.169 1.00 0.19 ATOM 105 N LYS 27 -21.083 -23.797 0.401 1.00 0.37 ATOM 106 CA LYS 27 -20.238 -24.237 1.461 1.00 0.37 ATOM 107 C LYS 27 -19.768 -23.063 2.303 1.00 0.37 ATOM 108 O LYS 27 -19.277 -23.257 3.413 1.00 0.37 ATOM 109 N GLY 28 -19.987 -21.860 1.645 1.00 0.44 ATOM 110 CA GLY 28 -20.281 -20.636 2.473 1.00 0.44 ATOM 111 C GLY 28 -20.825 -19.474 1.744 1.00 0.44 ATOM 112 O GLY 28 -20.610 -19.344 0.541 1.00 0.44 ATOM 113 N ILE 29 -21.548 -18.544 2.362 1.00 0.32 ATOM 114 CA ILE 29 -21.923 -17.311 1.665 1.00 0.32 ATOM 115 C ILE 29 -21.649 -16.080 2.618 1.00 0.32 ATOM 116 O ILE 29 -22.113 -16.066 3.756 1.00 0.32 ATOM 117 N SER 30 -20.872 -15.051 2.062 1.00 0.27 ATOM 118 CA SER 30 -20.686 -13.830 2.770 1.00 0.27 ATOM 119 C SER 30 -21.398 -12.690 2.049 1.00 0.27 ATOM 120 O SER 30 -21.780 -12.837 0.890 1.00 0.27 ATOM 121 N THR 31 -21.627 -11.488 2.647 1.00 0.32 ATOM 122 CA THR 31 -22.583 -10.645 1.872 1.00 0.32 ATOM 123 C THR 31 -22.061 -10.508 0.358 1.00 0.32 ATOM 124 O THR 31 -22.858 -10.562 -0.576 1.00 0.32 ATOM 125 N TYR 32 -20.819 -10.348 0.075 1.00 0.83 ATOM 126 CA TYR 32 -20.462 -10.292 -1.360 1.00 0.83 ATOM 127 C TYR 32 -20.146 -11.586 -2.173 1.00 0.83 ATOM 128 O TYR 32 -19.809 -11.507 -3.353 1.00 0.83 ATOM 129 N ASN 33 -20.291 -12.726 -1.448 1.00 1.00 ATOM 130 CA ASN 33 -19.468 -13.816 -1.963 1.00 1.00 ATOM 131 C ASN 33 -19.949 -15.143 -1.662 1.00 1.00 ATOM 132 O ASN 33 -20.273 -15.435 -0.513 1.00 1.00 ATOM 133 N VAL 34 -20.043 -16.090 -2.635 1.00 0.92 ATOM 134 CA VAL 34 -20.394 -17.457 -2.075 1.00 0.92 ATOM 135 C VAL 34 -19.864 -18.611 -2.904 1.00 0.92 ATOM 136 O VAL 34 -19.911 -18.562 -4.131 1.00 0.92 ATOM 137 N TYR 35 -19.389 -19.596 -2.131 1.00 0.40 ATOM 138 CA TYR 35 -18.352 -20.588 -2.425 1.00 0.40 ATOM 139 C TYR 35 -19.105 -21.871 -2.601 1.00 0.40 ATOM 140 O TYR 35 -19.513 -22.487 -1.620 1.00 0.40 ATOM 141 N TYR 36 -19.237 -22.206 -3.929 1.00 0.72 ATOM 142 CA TYR 36 -20.090 -23.248 -4.422 1.00 0.72 ATOM 143 C TYR 36 -19.302 -24.549 -4.802 1.00 0.72 ATOM 144 O TYR 36 -18.407 -24.504 -5.643 1.00 0.72 ATOM 145 N GLN 37 -19.554 -25.801 -4.242 1.00 0.42 ATOM 146 CA GLN 37 -18.712 -26.843 -4.585 1.00 0.42 ATOM 147 C GLN 37 -19.490 -28.058 -5.084 1.00 0.42 ATOM 148 O GLN 37 -20.483 -28.448 -4.472 1.00 0.42 ATOM 149 N VAL 38 -19.040 -28.622 -6.146 1.00 0.43 ATOM 150 CA VAL 38 -19.666 -29.837 -6.763 1.00 0.43 ATOM 151 C VAL 38 -18.598 -30.913 -6.671 1.00 0.43 ATOM 152 O VAL 38 -17.479 -30.712 -7.136 1.00 0.43 ATOM 153 N GLU 39 -19.019 -32.114 -6.028 1.00 0.73 ATOM 154 CA GLU 39 -18.195 -33.359 -5.939 1.00 0.73 ATOM 155 C GLU 39 -18.700 -34.357 -6.887 1.00 0.73 ATOM 156 O GLU 39 -19.718 -34.996 -6.625 1.00 0.73 ATOM 157 N ASN 40 -18.046 -34.583 -8.051 1.00 0.98 ATOM 158 CA ASN 40 -18.585 -35.448 -9.063 1.00 0.98 ATOM 159 C ASN 40 -17.392 -36.490 -9.248 1.00 0.98 ATOM 160 O ASN 40 -16.319 -36.120 -9.719 1.00 0.98 ATOM 161 N ASN 41 -17.636 -37.694 -8.886 1.00 0.17 ATOM 162 CA ASN 41 -16.625 -38.718 -9.283 1.00 0.17 ATOM 163 C ASN 41 -15.133 -38.559 -8.701 1.00 0.17 ATOM 164 O ASN 41 -14.190 -39.109 -9.265 1.00 0.17 ATOM 165 N GLY 42 -15.145 -37.812 -7.625 1.00 0.64 ATOM 166 CA GLY 42 -13.947 -37.342 -6.919 1.00 0.64 ATOM 167 C GLY 42 -13.354 -36.095 -7.542 1.00 0.64 ATOM 168 O GLY 42 -12.317 -35.614 -7.090 1.00 0.64 ATOM 169 N VAL 43 -13.941 -35.497 -8.579 1.00 0.59 ATOM 170 CA VAL 43 -13.472 -34.216 -8.989 1.00 0.59 ATOM 171 C VAL 43 -14.295 -33.049 -8.344 1.00 0.59 ATOM 172 O VAL 43 -15.518 -33.127 -8.265 1.00 0.59 ATOM 173 N ILE 44 -13.574 -32.032 -7.924 1.00 0.65 ATOM 174 CA ILE 44 -14.067 -30.931 -7.048 1.00 0.65 ATOM 175 C ILE 44 -13.953 -29.726 -7.899 1.00 0.65 ATOM 176 O ILE 44 -12.855 -29.376 -8.327 1.00 0.65 ATOM 177 N TYR 45 -15.098 -29.154 -8.091 1.00 0.32 ATOM 178 CA TYR 45 -15.298 -28.030 -8.935 1.00 0.32 ATOM 179 C TYR 45 -15.804 -26.857 -8.000 1.00 0.32 ATOM 180 O TYR 45 -16.803 -27.014 -7.301 1.00 0.32 ATOM 181 N SER 46 -15.034 -25.767 -8.098 1.00 0.63 ATOM 182 CA SER 46 -15.343 -24.693 -7.234 1.00 0.63 ATOM 183 C SER 46 -15.710 -23.464 -8.068 1.00 0.63 ATOM 184 O SER 46 -14.923 -23.030 -8.905 1.00 0.63 ATOM 185 N CYS 47 -16.891 -22.989 -7.763 1.00 0.12 ATOM 186 CA CYS 47 -17.307 -21.649 -8.221 1.00 0.12 ATOM 187 C CYS 47 -17.522 -20.708 -7.002 1.00 0.12 ATOM 188 O CYS 47 -18.317 -21.017 -6.116 1.00 0.12 ATOM 189 N VAL 48 -16.832 -19.654 -7.030 1.00 0.51 ATOM 190 CA VAL 48 -16.747 -18.654 -6.016 1.00 0.51 ATOM 191 C VAL 48 -17.176 -17.477 -6.745 1.00 0.51 ATOM 192 O VAL 48 -16.382 -16.876 -7.467 1.00 0.51 ATOM 193 N SER 49 -18.467 -17.188 -6.506 1.00 0.59 ATOM 194 CA SER 49 -19.202 -16.065 -7.180 1.00 0.59 ATOM 195 C SER 49 -19.772 -14.950 -6.333 1.00 0.59 ATOM 196 O SER 49 -20.190 -15.187 -5.201 1.00 0.59 ATOM 197 N ASP 50 -19.770 -13.736 -6.941 1.00 0.15 ATOM 198 CA ASP 50 -20.336 -12.696 -6.130 1.00 0.15 ATOM 199 C ASP 50 -21.773 -12.726 -6.429 1.00 0.15 ATOM 200 O ASP 50 -22.529 -11.914 -5.902 1.00 0.15 ATOM 201 N SER 51 -22.257 -13.618 -7.255 1.00 0.20 ATOM 202 CA SER 51 -23.646 -13.649 -7.606 1.00 0.20 ATOM 203 C SER 51 -24.369 -14.930 -7.269 1.00 0.20 ATOM 204 O SER 51 -23.905 -16.010 -7.628 1.00 0.20 ATOM 205 N ALA 52 -25.512 -14.707 -6.575 1.00 0.44 ATOM 206 CA ALA 52 -26.547 -15.705 -6.135 1.00 0.44 ATOM 207 C ALA 52 -27.037 -16.253 -7.446 1.00 0.44 ATOM 208 O ALA 52 -27.336 -17.442 -7.544 1.00 0.44 ATOM 209 N GLU 53 -27.153 -15.422 -8.574 1.00 0.29 ATOM 210 CA GLU 53 -27.769 -16.026 -9.760 1.00 0.29 ATOM 211 C GLU 53 -26.872 -17.104 -10.261 1.00 0.29 ATOM 212 O GLU 53 -27.349 -18.137 -10.724 1.00 0.29 ATOM 213 N GLY 54 -25.495 -16.922 -10.189 1.00 0.80 ATOM 214 CA GLY 54 -24.519 -17.914 -10.715 1.00 0.80 ATOM 215 C GLY 54 -24.838 -19.192 -9.928 1.00 0.80 ATOM 216 O GLY 54 -24.921 -20.271 -10.511 1.00 0.80 ATOM 217 N LEU 55 -25.006 -18.915 -8.557 1.00 0.06 ATOM 218 CA LEU 55 -25.111 -20.111 -7.773 1.00 0.06 ATOM 219 C LEU 55 -26.351 -20.937 -8.127 1.00 0.06 ATOM 220 O LEU 55 -26.282 -22.164 -8.168 1.00 0.06 ATOM 221 N GLU 56 -27.359 -20.174 -8.354 1.00 0.79 ATOM 222 CA GLU 56 -28.633 -20.924 -8.652 1.00 0.79 ATOM 223 C GLU 56 -28.481 -21.719 -9.889 1.00 0.79 ATOM 224 O GLU 56 -28.919 -22.866 -9.942 1.00 0.79 ATOM 225 N LYS 57 -27.863 -21.106 -10.854 1.00 0.55 ATOM 226 CA LYS 57 -27.773 -21.773 -12.193 1.00 0.55 ATOM 227 C LYS 57 -26.939 -23.049 -11.987 1.00 0.55 ATOM 228 O LYS 57 -27.287 -24.105 -12.510 1.00 0.55 ATOM 229 N CYS 58 -25.867 -22.842 -11.206 1.00 0.68 ATOM 230 CA CYS 58 -24.802 -23.873 -11.158 1.00 0.68 ATOM 231 C CYS 58 -25.566 -25.160 -10.922 1.00 0.68 ATOM 232 O CYS 58 -25.304 -26.163 -11.583 1.00 0.68 ATOM 233 N ASP 59 -26.473 -25.071 -10.001 1.00 0.66 ATOM 234 CA ASP 59 -27.296 -26.158 -9.481 1.00 0.66 ATOM 235 C ASP 59 -28.377 -26.620 -10.453 1.00 0.66 ATOM 236 O ASP 59 -28.564 -27.820 -10.643 1.00 0.66 ATOM 237 N ASN 60 -29.043 -25.549 -11.034 1.00 0.37 ATOM 238 CA ASN 60 -30.151 -25.894 -11.822 1.00 0.37 ATOM 239 C ASN 60 -29.931 -25.390 -13.333 1.00 0.37 ATOM 240 O ASN 60 -29.351 -24.329 -13.551 1.00 0.37 ATOM 241 N SER 61 -30.413 -26.177 -14.253 1.00 0.55 ATOM 242 CA SER 61 -29.815 -26.725 -15.378 1.00 0.55 ATOM 243 C SER 61 -28.957 -27.868 -15.097 1.00 0.55 ATOM 244 O SER 61 -28.817 -28.265 -13.943 1.00 0.55 ATOM 245 N LEU 62 -28.329 -28.467 -16.104 1.00 0.61 ATOM 246 CA LEU 62 -27.685 -29.747 -15.685 1.00 0.61 ATOM 247 C LEU 62 -26.386 -29.628 -15.023 1.00 0.61 ATOM 248 O LEU 62 -25.383 -30.111 -15.542 1.00 0.61 ATOM 249 N ASN 63 -26.482 -28.957 -13.835 1.00 0.58 ATOM 250 CA ASN 63 -25.527 -28.314 -13.067 1.00 0.58 ATOM 251 C ASN 63 -24.632 -27.502 -14.025 1.00 0.58 ATOM 252 O ASN 63 -23.410 -27.520 -13.892 1.00 0.58 ATOM 253 N LEU 64 -25.138 -26.770 -14.999 1.00 0.96 ATOM 254 CA LEU 64 -24.174 -26.115 -15.823 1.00 0.96 ATOM 255 C LEU 64 -23.996 -24.835 -15.174 1.00 0.96 ATOM 256 O LEU 64 -24.938 -24.051 -15.088 1.00 0.96 ATOM 257 N PRO 65 -22.792 -24.507 -14.670 1.00 0.92 ATOM 258 CA PRO 65 -22.730 -23.247 -14.045 1.00 0.92 ATOM 259 C PRO 65 -23.045 -22.276 -15.188 1.00 0.92 ATOM 260 O PRO 65 -22.767 -22.576 -16.347 1.00 0.92 ATOM 261 N LYS 66 -23.603 -21.153 -14.837 1.00 0.78 ATOM 262 CA LYS 66 -23.669 -20.180 -15.921 1.00 0.78 ATOM 263 C LYS 66 -22.296 -19.680 -16.067 1.00 0.78 ATOM 264 O LYS 66 -21.816 -18.937 -15.213 1.00 0.78 ATOM 265 N ARG 67 -21.626 -20.085 -17.184 1.00 0.35 ATOM 266 CA ARG 67 -20.488 -19.592 -17.794 1.00 0.35 ATOM 267 C ARG 67 -19.256 -19.709 -16.820 1.00 0.35 ATOM 268 O ARG 67 -18.275 -18.987 -16.977 1.00 0.35 ATOM 269 N PHE 68 -19.230 -20.633 -15.756 1.00 0.02 ATOM 270 CA PHE 68 -18.008 -20.737 -15.117 1.00 0.02 ATOM 271 C PHE 68 -17.539 -19.420 -14.716 1.00 0.02 ATOM 272 O PHE 68 -16.410 -19.048 -15.026 1.00 0.02 ATOM 273 N SER 69 -18.376 -18.623 -13.988 1.00 0.02 ATOM 274 CA SER 69 -18.769 -17.250 -14.305 1.00 0.02 ATOM 275 C SER 69 -17.632 -16.383 -14.304 1.00 0.02 ATOM 276 O SER 69 -16.892 -16.338 -13.325 1.00 0.02 ATOM 277 N LYS 70 -17.288 -15.533 -15.391 1.00 0.77 ATOM 278 CA LYS 70 -15.965 -15.843 -16.109 1.00 0.77 ATOM 279 C LYS 70 -15.028 -16.623 -15.074 1.00 0.77 ATOM 280 O LYS 70 -14.445 -17.648 -15.422 1.00 0.77 ATOM 281 N VAL 71 -14.862 -16.222 -13.881 1.00 0.06 ATOM 282 CA VAL 71 -13.583 -16.207 -13.330 1.00 0.06 ATOM 283 C VAL 71 -13.384 -17.062 -12.001 1.00 0.06 ATOM 284 O VAL 71 -14.343 -17.292 -11.267 1.00 0.06 ATOM 285 N PRO 72 -12.275 -17.562 -11.581 1.00 0.44 ATOM 286 CA PRO 72 -12.274 -18.450 -10.333 1.00 0.44 ATOM 287 C PRO 72 -11.859 -17.688 -9.067 1.00 0.44 ATOM 288 O PRO 72 -10.755 -17.152 -9.003 1.00 0.44 ATOM 289 N VAL 73 -12.670 -17.567 -7.951 1.00 0.87 ATOM 290 CA VAL 73 -11.942 -17.269 -6.805 1.00 0.87 ATOM 291 C VAL 73 -11.547 -18.625 -6.024 1.00 0.87 ATOM 292 O VAL 73 -12.386 -19.508 -5.858 1.00 0.87 ATOM 293 N ILE 74 -10.307 -18.617 -5.633 1.00 0.11 ATOM 294 CA ILE 74 -9.637 -19.534 -4.716 1.00 0.11 ATOM 295 C ILE 74 -9.579 -18.905 -3.398 1.00 0.11 ATOM 296 O ILE 74 -9.026 -17.817 -3.258 1.00 0.11 ATOM 297 N PRO 75 -10.075 -19.434 -2.361 1.00 0.86 ATOM 298 CA PRO 75 -10.125 -18.778 -1.074 1.00 0.86 ATOM 299 C PRO 75 -8.787 -18.859 -0.286 1.00 0.86 ATOM 300 O PRO 75 -7.921 -19.663 -0.623 1.00 0.86 ATOM 301 N ILE 76 -8.547 -18.125 0.709 1.00 0.23 ATOM 302 CA ILE 76 -7.709 -18.417 1.814 1.00 0.23 ATOM 303 C ILE 76 -8.542 -17.935 3.096 1.00 0.23 ATOM 304 O ILE 76 -9.420 -17.084 2.976 1.00 0.23 ATOM 305 N THR 77 -8.234 -18.473 4.194 1.00 0.65 ATOM 306 CA THR 77 -8.784 -18.036 5.410 1.00 0.65 ATOM 307 C THR 77 -7.716 -18.413 6.464 1.00 0.65 ATOM 308 O THR 77 -6.817 -19.200 6.175 1.00 0.65 ATOM 309 N LYS 78 -7.721 -17.928 7.687 1.00 0.44 ATOM 310 CA LYS 78 -6.482 -18.131 8.417 1.00 0.44 ATOM 311 C LYS 78 -6.347 -19.490 9.098 1.00 0.44 ATOM 312 O LYS 78 -6.346 -19.567 10.324 1.00 0.44 ATOM 313 N LEU 79 -6.220 -20.609 8.319 1.00 0.61 ATOM 314 CA LEU 79 -6.955 -21.796 8.643 1.00 0.61 ATOM 315 C LEU 79 -8.403 -21.519 8.902 1.00 0.61 ATOM 316 O LEU 79 -9.045 -20.814 8.127 1.00 0.61 ATOM 317 N ASP 80 -8.822 -22.094 9.991 1.00 0.76 ATOM 318 CA ASP 80 -9.861 -21.480 10.924 1.00 0.76 ATOM 319 C ASP 80 -9.242 -21.556 12.315 1.00 0.76 ATOM 320 O ASP 80 -8.670 -22.581 12.680 1.00 0.76 ATOM 321 N ASN 81 -9.301 -20.501 13.214 1.00 0.17 ATOM 322 CA ASN 81 -8.833 -20.886 14.591 1.00 0.17 ATOM 323 C ASN 81 -9.801 -20.677 15.656 1.00 0.17 ATOM 324 O ASN 81 -9.770 -21.376 16.666 1.00 0.17 ATOM 325 N LYS 82 -10.713 -19.772 15.581 1.00 0.34 ATOM 326 CA LYS 82 -11.932 -19.591 16.326 1.00 0.34 ATOM 327 C LYS 82 -12.899 -20.694 15.871 1.00 0.34 ATOM 328 O LYS 82 -12.734 -21.248 14.788 1.00 0.34 ATOM 329 N ARG 83 -13.875 -21.060 16.564 1.00 0.73 ATOM 330 CA ARG 83 -15.052 -21.654 15.973 1.00 0.73 ATOM 331 C ARG 83 -15.852 -20.576 15.361 1.00 0.73 ATOM 332 O ARG 83 -16.654 -19.940 16.041 1.00 0.73 ATOM 333 N HIS 84 -15.635 -20.356 14.003 1.00 0.38 ATOM 334 CA HIS 84 -15.216 -19.012 13.495 1.00 0.38 ATOM 335 C HIS 84 -16.115 -18.560 12.402 1.00 0.38 ATOM 336 O HIS 84 -16.926 -19.342 11.908 1.00 0.38 ATOM 337 N PHE 85 -16.066 -17.307 11.923 1.00 0.10 ATOM 338 CA PHE 85 -16.238 -16.842 10.557 1.00 0.10 ATOM 339 C PHE 85 -14.933 -16.132 10.111 1.00 0.10 ATOM 340 O PHE 85 -14.003 -15.998 10.902 1.00 0.10 ATOM 341 N SER 86 -14.882 -15.705 8.926 1.00 0.88 ATOM 342 CA SER 86 -13.823 -15.668 8.037 1.00 0.88 ATOM 343 C SER 86 -13.024 -14.305 8.048 1.00 0.88 ATOM 344 O SER 86 -13.571 -13.274 8.435 1.00 0.88 ATOM 345 N VAL 87 -11.784 -14.230 7.649 1.00 0.84 ATOM 346 CA VAL 87 -11.189 -13.159 6.894 1.00 0.84 ATOM 347 C VAL 87 -11.296 -13.452 5.314 1.00 0.84 ATOM 348 O VAL 87 -10.279 -13.490 4.624 1.00 0.84 ATOM 349 N GLY 88 -12.503 -13.640 4.804 1.00 0.02 ATOM 350 CA GLY 88 -12.636 -14.582 3.695 1.00 0.02 ATOM 351 C GLY 88 -11.961 -13.900 2.589 1.00 0.02 ATOM 352 O GLY 88 -12.523 -12.979 1.999 1.00 0.02 ATOM 353 N THR 89 -10.686 -14.452 2.357 1.00 0.58 ATOM 354 CA THR 89 -9.806 -13.721 1.447 1.00 0.58 ATOM 355 C THR 89 -9.828 -14.562 0.216 1.00 0.58 ATOM 356 O THR 89 -9.676 -15.779 0.299 1.00 0.58 ATOM 357 N LYS 90 -10.017 -13.951 -1.046 1.00 0.95 ATOM 358 CA LYS 90 -10.115 -14.662 -2.327 1.00 0.95 ATOM 359 C LYS 90 -9.151 -14.228 -3.350 1.00 0.95 ATOM 360 O LYS 90 -8.830 -13.045 -3.432 1.00 0.95 ATOM 361 N PHE 91 -8.580 -15.162 -4.263 1.00 0.39 ATOM 362 CA PHE 91 -7.827 -14.667 -5.349 1.00 0.39 ATOM 363 C PHE 91 -8.756 -14.811 -6.499 1.00 0.39 ATOM 364 O PHE 91 -9.355 -15.870 -6.678 1.00 0.39 ATOM 365 N PHE 92 -8.826 -13.652 -7.282 1.00 0.35 ATOM 366 CA PHE 92 -9.763 -13.614 -8.403 1.00 0.35 ATOM 367 C PHE 92 -8.852 -13.750 -9.571 1.00 0.35 ATOM 368 O PHE 92 -8.208 -12.780 -9.964 1.00 0.35 ATOM 369 N ILE 93 -8.887 -15.024 -10.057 1.00 0.83 ATOM 370 CA ILE 93 -8.270 -15.506 -11.200 1.00 0.83 ATOM 371 C ILE 93 -9.127 -15.300 -12.405 1.00 0.83 ATOM 372 O ILE 93 -10.137 -15.980 -12.565 1.00 0.83 ATOM 373 N SER 94 -8.663 -14.355 -13.210 1.00 0.58 ATOM 374 CA SER 94 -9.364 -13.520 -14.270 1.00 0.58 ATOM 375 C SER 94 -8.810 -13.697 -15.597 1.00 0.58 ATOM 376 O SER 94 -7.593 -13.640 -15.769 1.00 0.58 ATOM 377 N GLU 95 -9.632 -13.928 -16.712 1.00 0.41 ATOM 378 CA GLU 95 -8.920 -13.830 -17.967 1.00 0.41 ATOM 379 C GLU 95 -9.245 -12.604 -18.614 1.00 0.41 ATOM 380 O GLU 95 -10.413 -12.345 -18.894 1.00 0.41 ATOM 381 N SER 96 -8.334 -11.779 -18.910 1.00 0.93 ATOM 382 CA SER 96 -8.495 -10.404 -19.033 1.00 0.93 ATOM 383 C SER 96 -8.878 -10.247 -20.405 1.00 0.93 ATOM 384 O SER 96 -8.020 -10.096 -21.272 1.00 0.93 ATOM 385 N LEU 97 -10.291 -10.284 -20.568 1.00 0.08 ATOM 386 CA LEU 97 -10.931 -10.486 -21.867 1.00 0.08 ATOM 387 C LEU 97 -10.488 -9.328 -22.568 1.00 0.08 ATOM 388 O LEU 97 -10.088 -9.424 -23.727 1.00 0.08 ATOM 389 N THR 98 -10.496 -8.210 -22.014 1.00 0.02 ATOM 390 CA THR 98 -10.031 -6.997 -22.500 1.00 0.02 ATOM 391 C THR 98 -9.694 -6.020 -21.463 1.00 0.02 ATOM 392 O THR 98 -10.395 -5.024 -21.304 1.00 0.02 ATOM 393 N GLN 99 -8.644 -6.150 -20.669 1.00 0.52 ATOM 394 CA GLN 99 -8.170 -4.966 -20.062 1.00 0.52 ATOM 395 C GLN 99 -6.779 -4.844 -19.677 1.00 0.52 ATOM 396 O GLN 99 -6.261 -3.732 -19.587 1.00 0.52 ATOM 397 N ASP 100 -6.172 -6.111 -19.452 1.00 0.85 ATOM 398 CA ASP 100 -4.928 -6.429 -18.920 1.00 0.85 ATOM 399 C ASP 100 -4.830 -5.696 -17.639 1.00 0.85 ATOM 400 O ASP 100 -3.850 -4.992 -17.405 1.00 0.85 ATOM 401 N ASN 101 -5.899 -5.910 -16.820 1.00 0.23 ATOM 402 CA ASN 101 -6.149 -5.506 -15.359 1.00 0.23 ATOM 403 C ASN 101 -5.091 -6.053 -14.438 1.00 0.23 ATOM 404 O ASN 101 -4.641 -5.354 -13.532 1.00 0.23 ATOM 405 N TYR 102 -4.624 -7.316 -14.608 1.00 0.43 ATOM 406 CA TYR 102 -4.385 -8.318 -13.490 1.00 0.43 ATOM 407 C TYR 102 -2.815 -8.634 -13.506 1.00 0.43 ATOM 408 O TYR 102 -2.141 -8.355 -14.494 1.00 0.43 ATOM 409 N PRO 103 -2.236 -9.242 -12.370 1.00 0.18 ATOM 410 CA PRO 103 -0.801 -9.682 -12.377 1.00 0.18 ATOM 411 C PRO 103 -0.709 -10.888 -13.306 1.00 0.18 ATOM 412 O PRO 103 -1.697 -11.591 -13.504 1.00 0.18 ATOM 413 N ILE 104 0.458 -11.175 -13.894 1.00 0.74 ATOM 414 CA ILE 104 0.590 -12.592 -14.287 1.00 0.74 ATOM 415 C ILE 104 1.735 -13.052 -13.365 1.00 0.74 ATOM 416 O ILE 104 2.901 -12.797 -13.657 1.00 0.74 ATOM 417 N THR 105 1.466 -13.748 -12.224 1.00 0.48 ATOM 418 CA THR 105 2.403 -13.678 -11.068 1.00 0.48 ATOM 419 C THR 105 3.606 -14.678 -11.483 1.00 0.48 ATOM 420 O THR 105 3.454 -15.476 -12.405 1.00 0.48 ATOM 421 N TYR 106 4.860 -14.694 -10.820 1.00 0.34 ATOM 422 CA TYR 106 6.095 -14.836 -11.647 1.00 0.34 ATOM 423 C TYR 106 6.560 -16.167 -11.397 1.00 0.34 ATOM 424 O TYR 106 6.759 -16.545 -10.246 1.00 0.34 ATOM 425 N ASN 107 6.758 -16.923 -12.433 1.00 0.71 ATOM 426 CA ASN 107 6.628 -18.384 -12.523 1.00 0.71 ATOM 427 C ASN 107 5.235 -18.986 -12.454 1.00 0.71 ATOM 428 O ASN 107 5.094 -20.192 -12.264 1.00 0.71 ATOM 429 N SER 108 4.288 -18.068 -12.627 1.00 0.56 ATOM 430 CA SER 108 2.933 -18.504 -12.749 1.00 0.56 ATOM 431 C SER 108 2.699 -18.517 -14.322 1.00 0.56 ATOM 432 O SER 108 2.936 -17.511 -14.987 1.00 0.56 ATOM 433 N TYR 109 2.260 -19.613 -14.794 1.00 0.10 ATOM 434 CA TYR 109 1.802 -19.704 -16.148 1.00 0.10 ATOM 435 C TYR 109 0.344 -19.703 -16.261 1.00 0.10 ATOM 436 O TYR 109 -0.321 -20.552 -15.671 1.00 0.10 ATOM 437 N PRO 110 -0.045 -18.686 -17.069 1.00 0.55 ATOM 438 CA PRO 110 -1.242 -18.658 -17.810 1.00 0.55 ATOM 439 C PRO 110 -1.402 -19.997 -18.533 1.00 0.55 ATOM 440 O PRO 110 -0.663 -20.283 -19.471 1.00 0.55 ATOM 441 N THR 111 -2.444 -20.800 -18.021 1.00 0.95 ATOM 442 CA THR 111 -3.176 -21.483 -19.003 1.00 0.95 ATOM 443 C THR 111 -3.930 -20.412 -19.673 1.00 0.95 ATOM 444 O THR 111 -3.552 -19.979 -20.760 1.00 0.95 ATOM 445 N ASN 112 -4.990 -19.998 -19.000 1.00 0.94 ATOM 446 CA ASN 112 -6.122 -19.095 -19.461 1.00 0.94 ATOM 447 C ASN 112 -6.490 -17.939 -18.614 1.00 0.94 ATOM 448 O ASN 112 -7.506 -17.292 -18.863 1.00 0.94 ATOM 449 N GLY 113 -5.682 -17.582 -17.540 1.00 0.15 ATOM 450 CA GLY 113 -5.902 -16.434 -16.705 1.00 0.15 ATOM 451 C GLY 113 -4.716 -15.541 -16.249 1.00 0.15 ATOM 452 O GLY 113 -3.570 -15.812 -16.602 1.00 0.15 ATOM 453 N THR 114 -4.978 -14.544 -15.504 1.00 0.76 ATOM 454 CA THR 114 -4.021 -13.627 -14.733 1.00 0.76 ATOM 455 C THR 114 -4.668 -13.588 -13.292 1.00 0.76 ATOM 456 O THR 114 -5.752 -14.131 -13.089 1.00 0.76 ATOM 457 N VAL 115 -4.020 -12.943 -12.279 1.00 0.22 ATOM 458 CA VAL 115 -4.400 -12.928 -10.884 1.00 0.22 ATOM 459 C VAL 115 -4.553 -11.488 -10.203 1.00 0.22 ATOM 460 O VAL 115 -3.658 -10.653 -10.320 1.00 0.22 ATOM 461 N CYS 116 -5.672 -11.183 -9.482 1.00 0.29 ATOM 462 CA CYS 116 -5.851 -10.137 -8.589 1.00 0.29 ATOM 463 C CYS 116 -6.118 -10.891 -7.205 1.00 0.29 ATOM 464 O CYS 116 -6.551 -12.042 -7.204 1.00 0.29 ATOM 465 N LEU 117 -5.822 -10.121 -6.162 1.00 0.55 ATOM 466 CA LEU 117 -6.297 -10.195 -4.715 1.00 0.55 ATOM 467 C LEU 117 -7.612 -9.593 -4.646 1.00 0.55 ATOM 468 O LEU 117 -7.748 -8.386 -4.834 1.00 0.55 ATOM 469 N GLN 118 -8.650 -10.365 -4.373 1.00 0.64 ATOM 470 CA GLN 118 -9.958 -9.581 -4.230 1.00 0.64 ATOM 471 C GLN 118 -10.394 -9.832 -2.789 1.00 0.64 ATOM 472 O GLN 118 -9.870 -10.729 -2.134 1.00 0.64 ATOM 473 N THR 119 -11.321 -9.114 -2.238 1.00 0.57 ATOM 474 CA THR 119 -11.141 -8.496 -0.964 1.00 0.57 ATOM 475 C THR 119 -11.523 -9.536 -0.061 1.00 0.57 ATOM 476 O THR 119 -11.355 -10.714 -0.371 1.00 0.57 ATOM 477 N VAL 120 -12.076 -9.001 1.119 1.00 0.45 ATOM 478 CA VAL 120 -11.907 -9.613 2.460 1.00 0.45 ATOM 479 C VAL 120 -13.258 -9.512 3.223 1.00 0.45 ATOM 480 O VAL 120 -13.746 -8.412 3.470 1.00 0.45 ATOM 481 N LYS 121 -13.904 -10.613 3.625 1.00 0.41 ATOM 482 CA LYS 121 -15.170 -10.540 4.444 1.00 0.41 ATOM 483 C LYS 121 -14.871 -10.955 5.879 1.00 0.41 ATOM 484 O LYS 121 -14.393 -12.062 6.113 1.00 0.41 ATOM 485 N LEU 122 -15.133 -10.118 6.893 1.00 0.09 ATOM 486 CA LEU 122 -14.802 -10.285 8.266 1.00 0.09 ATOM 487 C LEU 122 -16.134 -10.516 8.973 1.00 0.09 ATOM 488 O LEU 122 -17.075 -9.750 8.781 1.00 0.09 TER END