####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 563), selected 80 , name T1052TS055_1-D3 # Molecule2: number of CA atoms 80 ( 563), selected 80 , name T1052-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS055_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 1.94 1.94 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 1.94 1.94 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 615 - 637 0.98 2.07 LCS_AVERAGE: 22.12 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 589 T 589 20 80 80 4 37 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 590 R 590 20 80 80 7 32 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT Q 591 Q 591 20 80 80 8 32 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT Y 592 Y 592 20 80 80 8 32 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 593 A 593 20 80 80 8 17 53 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 594 P 594 20 80 80 11 32 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 595 V 595 20 80 80 11 40 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 596 G 596 20 80 80 4 23 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 597 G 597 20 80 80 7 30 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 598 S 598 20 80 80 14 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 599 I 599 20 80 80 10 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 600 P 600 20 80 80 14 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 601 A 601 20 80 80 5 32 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 602 S 602 20 80 80 10 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 603 G 603 20 80 80 9 33 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 604 S 604 20 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 605 V 605 20 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 606 A 606 20 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 607 L 607 20 80 80 11 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 608 T 608 20 80 80 8 32 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 609 P 609 16 80 80 3 11 28 61 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 610 T 610 4 80 80 4 5 6 6 9 44 62 73 78 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT E 611 E 611 4 80 80 4 4 6 26 53 61 72 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 612 V 612 4 80 80 4 6 14 31 53 61 72 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 613 G 613 4 80 80 4 4 7 28 47 60 72 76 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 614 I 614 4 80 80 3 10 16 30 57 66 74 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 615 F 615 23 80 80 3 14 49 66 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT W 616 W 616 23 80 80 3 23 53 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT N 617 N 617 23 80 80 6 28 55 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 618 G 618 23 80 80 4 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 619 A 619 23 80 80 11 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 620 T 620 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 621 G 621 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT K 622 K 622 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT C 623 C 623 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 624 I 624 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 625 F 625 23 80 80 11 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 626 G 626 23 80 80 11 37 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 627 G 627 23 80 80 12 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 628 I 628 23 80 80 15 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT D 629 D 629 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 630 G 630 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 631 T 631 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 632 F 632 23 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 633 S 633 23 80 80 15 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 634 T 634 23 80 80 6 36 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 635 T 635 23 80 80 6 30 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 636 L 636 23 80 80 9 35 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 637 V 637 23 80 80 5 32 54 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT N 638 N 638 22 80 80 8 23 53 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 639 A 639 22 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 640 G 640 22 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 641 T 641 15 80 80 4 11 46 61 69 73 75 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 642 G 642 17 80 80 4 10 22 51 66 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT E 643 E 643 17 80 80 6 36 52 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 644 T 644 17 80 80 4 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT Q 645 Q 645 17 80 80 15 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 646 L 646 17 80 80 11 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 647 V 647 17 80 80 11 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 648 F 648 17 80 80 11 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 649 T 649 17 80 80 15 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 650 R 650 17 80 80 13 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT D 651 D 651 17 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 652 S 652 17 80 80 12 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 653 A 653 17 80 80 13 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 654 G 654 17 80 80 3 37 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 655 S 655 17 80 80 10 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 656 A 656 17 80 80 12 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 657 V 657 17 80 80 10 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 658 S 658 17 80 80 7 29 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 659 V 659 17 80 80 3 19 41 65 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 660 S 660 8 80 80 3 9 14 35 65 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 661 T 661 7 80 80 1 8 22 58 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 662 T 662 7 80 80 4 16 37 66 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 663 A 663 7 80 80 4 16 51 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 664 T 664 7 80 80 7 16 55 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 665 F 665 7 80 80 11 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 666 A 666 7 80 80 3 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT M 667 M 667 7 80 80 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 668 R 668 7 80 80 10 40 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 LCS_AVERAGE LCS_A: 74.04 ( 22.12 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 41 57 67 70 73 75 77 79 80 80 80 80 80 80 80 80 80 80 80 GDT PERCENT_AT 20.00 51.25 71.25 83.75 87.50 91.25 93.75 96.25 98.75 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.38 0.70 0.97 1.16 1.23 1.36 1.47 1.70 1.83 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 GDT RMS_ALL_AT 2.09 2.04 1.98 2.00 1.99 2.00 1.99 1.95 1.95 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 # Checking swapping # possible swapping detected: Y 592 Y 592 # possible swapping detected: F 632 F 632 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA T 589 T 589 1.414 0 0.734 0.686 4.570 65.909 40.260 4.570 LGA R 590 R 590 1.590 0 0.107 1.058 4.748 58.182 45.950 4.748 LGA Q 591 Q 591 1.818 0 0.043 1.276 5.740 50.909 35.758 5.740 LGA Y 592 Y 592 1.579 0 0.043 0.160 2.188 50.909 55.000 2.188 LGA A 593 A 593 1.826 0 0.104 0.143 2.041 50.909 48.364 - LGA P 594 P 594 1.238 0 0.039 0.128 1.811 61.818 59.221 1.646 LGA V 595 V 595 0.831 0 0.626 1.453 3.396 61.818 58.961 2.808 LGA G 596 G 596 1.337 0 0.141 0.141 1.337 69.545 69.545 - LGA G 597 G 597 1.065 0 0.284 0.284 1.906 61.818 61.818 - LGA S 598 S 598 0.397 0 0.108 0.134 0.640 95.455 93.939 0.640 LGA I 599 I 599 1.174 0 0.026 0.655 4.305 73.636 58.409 4.305 LGA P 600 P 600 0.920 0 0.035 0.063 1.204 77.727 72.468 1.200 LGA A 601 A 601 1.384 0 0.048 0.050 1.931 61.818 59.636 - LGA S 602 S 602 0.958 0 0.068 0.508 2.091 77.727 69.091 2.091 LGA G 603 G 603 1.421 0 0.069 0.069 1.421 65.455 65.455 - LGA S 604 S 604 1.050 0 0.023 0.668 2.328 65.455 63.636 2.328 LGA V 605 V 605 0.749 0 0.030 0.119 0.877 81.818 81.818 0.577 LGA A 606 A 606 0.635 0 0.038 0.065 0.734 81.818 81.818 - LGA L 607 L 607 0.645 0 0.074 0.151 1.031 77.727 79.773 0.969 LGA T 608 T 608 1.572 0 0.102 1.075 3.306 54.545 47.013 3.306 LGA P 609 P 609 2.470 0 0.068 0.392 5.288 38.636 22.857 5.288 LGA T 610 T 610 6.176 0 0.654 0.577 9.752 1.364 0.779 9.752 LGA E 611 E 611 5.080 0 0.050 0.963 6.369 0.000 0.404 4.806 LGA V 612 V 612 4.938 0 0.066 0.122 5.547 2.727 1.818 5.547 LGA G 613 G 613 5.258 0 0.651 0.651 5.258 9.545 9.545 - LGA I 614 I 614 4.299 0 0.182 1.327 7.507 11.818 5.909 6.766 LGA F 615 F 615 2.099 0 0.579 0.584 2.964 35.909 40.165 2.473 LGA W 616 W 616 1.888 0 0.064 1.101 4.965 54.545 27.662 4.699 LGA N 617 N 617 1.718 0 0.437 0.613 6.968 61.818 32.273 5.389 LGA G 618 G 618 1.375 0 0.103 0.103 1.375 73.636 73.636 - LGA A 619 A 619 0.641 0 0.051 0.047 1.441 77.727 75.273 - LGA T 620 T 620 0.420 0 0.057 1.085 3.131 86.818 67.792 3.131 LGA G 621 G 621 0.826 0 0.031 0.031 1.162 77.727 77.727 - LGA K 622 K 622 1.125 0 0.050 0.809 4.623 77.727 53.131 4.623 LGA C 623 C 623 0.744 0 0.052 0.720 3.907 77.727 67.273 3.907 LGA I 624 I 624 0.565 0 0.034 0.089 0.886 81.818 90.909 0.191 LGA F 625 F 625 0.835 0 0.068 0.181 1.480 77.727 71.405 1.394 LGA G 626 G 626 1.008 0 0.109 0.109 1.357 73.636 73.636 - LGA G 627 G 627 0.403 0 0.048 0.048 0.515 95.455 95.455 - LGA I 628 I 628 0.799 0 0.030 0.066 0.988 81.818 81.818 0.903 LGA D 629 D 629 0.905 0 0.039 0.743 2.910 81.818 62.727 2.910 LGA G 630 G 630 0.869 0 0.063 0.063 1.305 73.636 73.636 - LGA T 631 T 631 0.992 0 0.088 1.035 2.623 81.818 69.351 1.397 LGA F 632 F 632 0.769 0 0.083 1.219 8.142 81.818 39.835 8.142 LGA S 633 S 633 0.341 0 0.189 0.610 2.334 91.364 83.939 2.334 LGA T 634 T 634 1.068 0 0.033 1.071 3.688 61.818 53.506 3.688 LGA T 635 T 635 1.404 0 0.035 1.203 3.439 69.545 56.883 3.439 LGA L 636 L 636 1.089 0 0.130 1.368 5.279 61.818 42.955 2.603 LGA V 637 V 637 2.054 0 0.652 1.479 4.937 51.818 37.922 4.937 LGA N 638 N 638 2.630 0 0.206 0.847 6.382 30.000 17.273 6.382 LGA A 639 A 639 1.172 0 0.651 0.605 4.210 43.636 51.273 - LGA G 640 G 640 0.933 0 0.059 0.059 3.086 55.000 55.000 - LGA T 641 T 641 4.008 0 0.144 0.146 5.033 10.000 8.052 3.532 LGA G 642 G 642 3.620 0 0.086 0.086 3.620 16.364 16.364 - LGA E 643 E 643 2.538 0 0.032 0.174 5.036 46.818 27.071 5.036 LGA T 644 T 644 1.194 0 0.039 1.226 4.042 65.909 55.065 1.390 LGA Q 645 Q 645 0.472 0 0.119 0.778 4.002 95.455 65.051 1.754 LGA L 646 L 646 0.952 0 0.038 0.257 1.737 81.818 73.864 1.485 LGA V 647 V 647 0.850 0 0.059 1.060 2.561 81.818 67.792 2.172 LGA F 648 F 648 1.047 0 0.031 0.328 1.575 73.636 68.595 1.441 LGA T 649 T 649 0.996 0 0.129 0.139 1.255 81.818 74.805 1.255 LGA R 650 R 650 1.007 0 0.033 1.170 2.581 73.636 64.132 2.581 LGA D 651 D 651 0.533 0 0.056 0.127 1.796 86.364 74.318 1.796 LGA S 652 S 652 0.936 0 0.051 0.279 2.346 86.364 72.424 2.346 LGA A 653 A 653 0.605 0 0.565 0.587 2.722 68.182 67.636 - LGA G 654 G 654 1.425 0 0.096 0.096 2.210 55.000 55.000 - LGA S 655 S 655 1.177 0 0.116 0.629 1.391 77.727 73.636 1.182 LGA A 656 A 656 0.907 0 0.033 0.042 0.907 81.818 81.818 - LGA V 657 V 657 0.953 0 0.113 1.072 3.313 81.818 68.052 3.313 LGA S 658 S 658 1.294 0 0.074 0.537 1.795 61.818 60.606 1.795 LGA V 659 V 659 2.164 0 0.119 1.003 4.325 38.636 37.662 4.325 LGA S 660 S 660 3.709 0 0.581 0.757 5.853 10.000 10.000 3.025 LGA T 661 T 661 3.012 0 0.287 1.125 6.216 25.455 16.104 5.434 LGA T 662 T 662 2.316 0 0.711 1.122 4.347 30.455 30.909 2.211 LGA A 663 A 663 1.916 0 0.074 0.076 1.916 54.545 53.818 - LGA T 664 T 664 1.904 0 0.073 0.092 3.220 58.182 43.636 3.220 LGA F 665 F 665 0.334 0 0.072 1.324 6.308 90.909 52.893 6.212 LGA A 666 A 666 1.086 0 0.141 0.181 1.362 69.545 68.727 - LGA M 667 M 667 0.951 0 0.037 0.105 2.363 86.364 67.273 2.363 LGA R 668 R 668 0.981 0 0.054 1.582 4.236 70.000 47.769 4.236 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 80 320 320 100.00 563 563 100.00 80 59 SUMMARY(RMSD_GDC): 1.944 1.926 2.578 62.347 54.560 30.108 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 77 1.70 82.812 90.894 4.273 LGA_LOCAL RMSD: 1.702 Number of atoms: 77 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.952 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 1.944 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.225515 * X + -0.739812 * Y + -0.633894 * Z + 103.529396 Y_new = 0.900165 * X + -0.090629 * Y + 0.426016 * Z + -60.288845 Z_new = -0.372621 * X + -0.666682 * Y + 0.645514 * Z + 13.976519 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.325323 0.381831 -0.801528 [DEG: 75.9354 21.8773 -45.9242 ] ZXZ: -2.162525 0.869100 -2.631928 [DEG: -123.9035 49.7957 -150.7984 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1052TS055_1-D3 REMARK 2: T1052-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS055_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 77 1.70 90.894 1.94 REMARK ---------------------------------------------------------- MOLECULE T1052TS055_1-D3 PFRMAT TS TARGET T1052 MODEL 1 PARENT N/A ATOM 4450 N THR 589 17.157 31.564 33.222 1.00 0.52 ATOM 4451 CA THR 589 17.643 31.512 34.583 1.00 0.52 ATOM 4452 CB THR 589 16.531 31.425 35.587 1.00 0.52 ATOM 4453 OG1 THR 589 15.790 30.228 35.407 1.00 0.52 ATOM 4454 CG2 THR 589 15.617 32.650 35.404 1.00 0.52 ATOM 4455 C THR 589 18.634 30.411 34.916 1.00 0.52 ATOM 4456 O THR 589 19.246 30.464 35.979 1.00 0.52 ATOM 4457 N ARG 590 18.786 29.358 34.086 1.00 0.39 ATOM 4458 CA ARG 590 19.541 28.168 34.424 1.00 0.39 ATOM 4459 CB ARG 590 19.818 27.272 33.205 1.00 0.39 ATOM 4460 CG ARG 590 18.566 26.856 32.430 1.00 0.39 ATOM 4461 CD ARG 590 17.755 25.737 33.084 1.00 0.39 ATOM 4462 NE ARG 590 16.735 26.374 33.961 1.00 0.39 ATOM 4463 CZ ARG 590 15.520 25.779 34.144 1.00 0.39 ATOM 4464 NH1 ARG 590 15.203 24.636 33.466 1.00 0.39 ATOM 4465 NH2 ARG 590 14.628 26.323 35.020 1.00 0.39 ATOM 4466 C ARG 590 20.877 28.463 35.049 1.00 0.39 ATOM 4467 O ARG 590 21.553 29.431 34.705 1.00 0.39 ATOM 4468 N GLN 591 21.288 27.597 36.010 1.00 0.71 ATOM 4469 CA GLN 591 22.537 27.758 36.710 1.00 0.71 ATOM 4470 CB GLN 591 22.352 27.861 38.234 1.00 0.71 ATOM 4471 CG GLN 591 21.567 29.102 38.665 1.00 0.71 ATOM 4472 CD GLN 591 21.320 29.002 40.163 1.00 0.71 ATOM 4473 OE1 GLN 591 21.265 27.908 40.722 1.00 0.71 ATOM 4474 NE2 GLN 591 21.163 30.174 40.835 1.00 0.71 ATOM 4475 C GLN 591 23.418 26.564 36.439 1.00 0.71 ATOM 4476 O GLN 591 22.950 25.426 36.439 1.00 0.71 ATOM 4477 N TYR 592 24.730 26.810 36.194 1.00 0.58 ATOM 4478 CA TYR 592 25.704 25.784 35.912 1.00 0.58 ATOM 4479 CB TYR 592 26.169 25.748 34.443 1.00 0.58 ATOM 4480 CG TYR 592 25.066 25.340 33.525 1.00 0.58 ATOM 4481 CD1 TYR 592 24.091 26.234 33.148 1.00 0.58 ATOM 4482 CD2 TYR 592 25.028 24.062 33.016 1.00 0.58 ATOM 4483 CE1 TYR 592 23.086 25.853 32.290 1.00 0.58 ATOM 4484 CE2 TYR 592 24.027 23.675 32.159 1.00 0.58 ATOM 4485 CZ TYR 592 23.052 24.572 31.795 1.00 0.58 ATOM 4486 OH TYR 592 22.022 24.177 30.914 1.00 0.58 ATOM 4487 C TYR 592 26.959 26.093 36.680 1.00 0.58 ATOM 4488 O TYR 592 27.155 27.221 37.132 1.00 0.58 ATOM 4489 N ALA 593 27.845 25.080 36.858 1.00 0.64 ATOM 4490 CA ALA 593 29.086 25.324 37.546 1.00 0.64 ATOM 4491 CB ALA 593 29.231 24.505 38.839 1.00 0.64 ATOM 4492 C ALA 593 30.235 24.937 36.650 1.00 0.64 ATOM 4493 O ALA 593 30.431 23.762 36.345 1.00 0.64 ATOM 4494 N PRO 594 31.041 25.889 36.249 1.00 0.56 ATOM 4495 CA PRO 594 32.173 25.657 35.389 1.00 0.56 ATOM 4496 CD PRO 594 30.786 27.299 36.481 1.00 0.56 ATOM 4497 CB PRO 594 32.676 27.044 34.982 1.00 0.56 ATOM 4498 CG PRO 594 32.092 27.989 36.051 1.00 0.56 ATOM 4499 C PRO 594 33.194 24.833 36.105 1.00 0.56 ATOM 4500 O PRO 594 33.521 25.138 37.250 1.00 0.56 ATOM 4501 N VAL 595 33.744 23.813 35.426 1.00 0.51 ATOM 4502 CA VAL 595 34.653 22.902 36.054 1.00 0.51 ATOM 4503 CB VAL 595 35.049 21.798 35.123 1.00 0.51 ATOM 4504 CG1 VAL 595 36.023 20.873 35.858 1.00 0.51 ATOM 4505 CG2 VAL 595 33.779 21.107 34.612 1.00 0.51 ATOM 4506 C VAL 595 35.898 23.630 36.466 1.00 0.51 ATOM 4507 O VAL 595 36.401 23.445 37.574 1.00 0.51 ATOM 4508 N GLY 596 36.440 24.459 35.549 1.00 0.74 ATOM 4509 CA GLY 596 37.639 25.235 35.733 1.00 0.74 ATOM 4510 C GLY 596 37.423 26.350 36.707 1.00 0.74 ATOM 4511 O GLY 596 38.360 26.822 37.347 1.00 0.74 ATOM 4512 N GLY 597 36.196 26.889 36.756 1.00 0.82 ATOM 4513 CA GLY 597 35.900 27.978 37.639 1.00 0.82 ATOM 4514 C GLY 597 35.975 29.204 36.795 1.00 0.82 ATOM 4515 O GLY 597 35.037 29.996 36.737 1.00 0.82 ATOM 4516 N SER 598 37.110 29.364 36.087 1.00 0.84 ATOM 4517 CA SER 598 37.284 30.481 35.211 1.00 0.84 ATOM 4518 CB SER 598 38.716 31.040 35.218 1.00 0.84 ATOM 4519 OG SER 598 39.627 30.052 34.757 1.00 0.84 ATOM 4520 C SER 598 36.986 30.012 33.827 1.00 0.84 ATOM 4521 O SER 598 36.946 28.811 33.560 1.00 0.84 ATOM 4522 N ILE 599 36.748 30.967 32.911 1.00 0.47 ATOM 4523 CA ILE 599 36.500 30.636 31.538 1.00 0.47 ATOM 4524 CB ILE 599 35.202 31.192 31.027 1.00 0.47 ATOM 4525 CG1 ILE 599 34.035 30.763 31.933 1.00 0.47 ATOM 4526 CG2 ILE 599 35.042 30.751 29.563 1.00 0.47 ATOM 4527 CD1 ILE 599 33.868 29.254 32.075 1.00 0.47 ATOM 4528 C ILE 599 37.589 31.306 30.754 1.00 0.47 ATOM 4529 O ILE 599 37.734 32.527 30.799 1.00 0.47 ATOM 4530 N PRO 600 38.358 30.535 30.037 1.00 0.62 ATOM 4531 CA PRO 600 39.477 31.014 29.262 1.00 0.62 ATOM 4532 CD PRO 600 38.004 29.163 29.718 1.00 0.62 ATOM 4533 CB PRO 600 40.111 29.756 28.673 1.00 0.62 ATOM 4534 CG PRO 600 38.922 28.785 28.542 1.00 0.62 ATOM 4535 C PRO 600 39.025 31.942 28.178 1.00 0.62 ATOM 4536 O PRO 600 37.885 31.841 27.728 1.00 0.62 ATOM 4537 N ALA 601 39.917 32.852 27.741 1.00 0.98 ATOM 4538 CA ALA 601 39.593 33.797 26.709 1.00 0.98 ATOM 4539 CB ALA 601 40.749 34.763 26.397 1.00 0.98 ATOM 4540 C ALA 601 39.278 33.039 25.458 1.00 0.98 ATOM 4541 O ALA 601 38.363 33.407 24.722 1.00 0.98 ATOM 4542 N SER 602 40.042 31.965 25.172 1.00 0.93 ATOM 4543 CA SER 602 39.770 31.191 23.995 1.00 0.93 ATOM 4544 CB SER 602 40.820 31.363 22.883 1.00 0.93 ATOM 4545 OG SER 602 40.475 30.563 21.761 1.00 0.93 ATOM 4546 C SER 602 39.789 29.753 24.408 1.00 0.93 ATOM 4547 O SER 602 40.429 29.392 25.394 1.00 0.93 ATOM 4548 N GLY 603 39.105 28.882 23.637 1.00 0.92 ATOM 4549 CA GLY 603 39.025 27.498 23.999 1.00 0.92 ATOM 4550 C GLY 603 37.689 27.278 24.638 1.00 0.92 ATOM 4551 O GLY 603 36.796 28.117 24.526 1.00 0.92 ATOM 4552 N SER 604 37.505 26.124 25.312 1.00 0.57 ATOM 4553 CA SER 604 36.204 25.875 25.858 1.00 0.57 ATOM 4554 CB SER 604 35.418 24.821 25.060 1.00 0.57 ATOM 4555 OG SER 604 34.111 24.681 25.592 1.00 0.57 ATOM 4556 C SER 604 36.319 25.384 27.271 1.00 0.57 ATOM 4557 O SER 604 37.371 24.910 27.697 1.00 0.57 ATOM 4558 N VAL 605 35.216 25.525 28.042 1.00 0.53 ATOM 4559 CA VAL 605 35.147 25.071 29.401 1.00 0.53 ATOM 4560 CB VAL 605 35.065 26.194 30.395 1.00 0.53 ATOM 4561 CG1 VAL 605 33.769 26.984 30.134 1.00 0.53 ATOM 4562 CG2 VAL 605 35.155 25.606 31.814 1.00 0.53 ATOM 4563 C VAL 605 33.891 24.262 29.545 1.00 0.53 ATOM 4564 O VAL 605 32.866 24.575 28.941 1.00 0.53 ATOM 4565 N ALA 606 33.953 23.166 30.331 1.00 0.82 ATOM 4566 CA ALA 606 32.783 22.361 30.538 1.00 0.82 ATOM 4567 CB ALA 606 33.096 20.898 30.894 1.00 0.82 ATOM 4568 C ALA 606 32.008 22.950 31.674 1.00 0.82 ATOM 4569 O ALA 606 32.579 23.495 32.617 1.00 0.82 ATOM 4570 N LEU 607 30.668 22.841 31.610 1.00 0.67 ATOM 4571 CA LEU 607 29.827 23.375 32.643 1.00 0.67 ATOM 4572 CB LEU 607 28.808 24.390 32.097 1.00 0.67 ATOM 4573 CG LEU 607 29.440 25.613 31.403 1.00 0.67 ATOM 4574 CD1 LEU 607 28.357 26.574 30.887 1.00 0.67 ATOM 4575 CD2 LEU 607 30.458 26.320 32.313 1.00 0.67 ATOM 4576 C LEU 607 29.027 22.233 33.190 1.00 0.67 ATOM 4577 O LEU 607 28.457 21.446 32.435 1.00 0.67 ATOM 4578 N THR 608 28.951 22.114 34.529 1.00 0.76 ATOM 4579 CA THR 608 28.173 21.053 35.106 1.00 0.76 ATOM 4580 CB THR 608 28.787 20.476 36.350 1.00 0.76 ATOM 4581 OG1 THR 608 30.085 19.968 36.071 1.00 0.76 ATOM 4582 CG2 THR 608 27.877 19.349 36.869 1.00 0.76 ATOM 4583 C THR 608 26.859 21.659 35.495 1.00 0.76 ATOM 4584 O THR 608 26.815 22.668 36.197 1.00 0.76 ATOM 4585 N PRO 609 25.781 21.083 35.031 1.00 0.56 ATOM 4586 CA PRO 609 24.494 21.646 35.340 1.00 0.56 ATOM 4587 CD PRO 609 25.791 20.453 33.719 1.00 0.56 ATOM 4588 CB PRO 609 23.514 21.028 34.347 1.00 0.56 ATOM 4589 CG PRO 609 24.393 20.703 33.126 1.00 0.56 ATOM 4590 C PRO 609 24.092 21.444 36.761 1.00 0.56 ATOM 4591 O PRO 609 24.357 20.381 37.317 1.00 0.56 ATOM 4592 N THR 610 23.524 22.488 37.387 1.00 0.65 ATOM 4593 CA THR 610 22.936 22.372 38.685 1.00 0.65 ATOM 4594 CB THR 610 22.795 23.694 39.378 1.00 0.65 ATOM 4595 OG1 THR 610 21.930 24.553 38.649 1.00 0.65 ATOM 4596 CG2 THR 610 24.196 24.322 39.489 1.00 0.65 ATOM 4597 C THR 610 21.577 21.782 38.480 1.00 0.65 ATOM 4598 O THR 610 21.049 21.082 39.343 1.00 0.65 ATOM 4599 N GLU 611 20.973 22.101 37.315 1.00 0.62 ATOM 4600 CA GLU 611 19.648 21.696 36.941 1.00 0.62 ATOM 4601 CB GLU 611 18.633 22.822 37.193 1.00 0.62 ATOM 4602 CG GLU 611 19.037 24.115 36.477 1.00 0.62 ATOM 4603 CD GLU 611 18.160 25.254 36.972 1.00 0.62 ATOM 4604 OE1 GLU 611 16.915 25.170 36.794 1.00 0.62 ATOM 4605 OE2 GLU 611 18.728 26.227 37.537 1.00 0.62 ATOM 4606 C GLU 611 19.674 21.443 35.461 1.00 0.62 ATOM 4607 O GLU 611 20.576 21.910 34.768 1.00 0.62 ATOM 4608 N VAL 612 18.687 20.689 34.926 1.00 0.80 ATOM 4609 CA VAL 612 18.689 20.402 33.515 1.00 0.80 ATOM 4610 CB VAL 612 18.651 18.932 33.213 1.00 0.80 ATOM 4611 CG1 VAL 612 18.575 18.739 31.689 1.00 0.80 ATOM 4612 CG2 VAL 612 19.878 18.272 33.865 1.00 0.80 ATOM 4613 C VAL 612 17.471 21.027 32.894 1.00 0.80 ATOM 4614 O VAL 612 16.380 20.959 33.458 1.00 0.80 ATOM 4615 N GLY 613 17.630 21.631 31.691 1.00 0.71 ATOM 4616 CA GLY 613 16.535 22.320 31.061 1.00 0.71 ATOM 4617 C GLY 613 16.586 22.161 29.563 1.00 0.71 ATOM 4618 O GLY 613 16.794 21.069 29.037 1.00 0.71 ATOM 4619 N ILE 614 16.420 23.302 28.856 1.00 0.37 ATOM 4620 CA ILE 614 16.281 23.469 27.427 1.00 0.37 ATOM 4621 CB ILE 614 16.200 24.907 26.996 1.00 0.37 ATOM 4622 CG1 ILE 614 17.500 25.659 27.314 1.00 0.37 ATOM 4623 CG2 ILE 614 14.996 25.543 27.691 1.00 0.37 ATOM 4624 CD1 ILE 614 17.775 25.783 28.811 1.00 0.37 ATOM 4625 C ILE 614 17.466 22.918 26.703 1.00 0.37 ATOM 4626 O ILE 614 17.347 22.471 25.565 1.00 0.37 ATOM 4627 N PHE 615 18.648 22.981 27.332 1.00 0.40 ATOM 4628 CA PHE 615 19.893 22.590 26.732 1.00 0.40 ATOM 4629 CB PHE 615 21.124 22.894 27.605 1.00 0.40 ATOM 4630 CG PHE 615 21.341 24.369 27.552 1.00 0.40 ATOM 4631 CD1 PHE 615 22.109 24.917 26.549 1.00 0.40 ATOM 4632 CD2 PHE 615 20.774 25.206 28.484 1.00 0.40 ATOM 4633 CE1 PHE 615 22.317 26.274 26.483 1.00 0.40 ATOM 4634 CE2 PHE 615 20.979 26.564 28.423 1.00 0.40 ATOM 4635 CZ PHE 615 21.753 27.101 27.422 1.00 0.40 ATOM 4636 C PHE 615 19.920 21.134 26.363 1.00 0.40 ATOM 4637 O PHE 615 20.680 20.741 25.481 1.00 0.40 ATOM 4638 N TRP 616 19.133 20.286 27.048 1.00 0.54 ATOM 4639 CA TRP 616 19.143 18.860 26.834 1.00 0.54 ATOM 4640 CB TRP 616 17.960 18.160 27.532 1.00 0.54 ATOM 4641 CG TRP 616 17.845 16.669 27.309 1.00 0.54 ATOM 4642 CD2 TRP 616 18.546 15.670 28.067 1.00 0.54 ATOM 4643 CD1 TRP 616 17.084 15.998 26.399 1.00 0.54 ATOM 4644 NE1 TRP 616 17.263 14.643 26.542 1.00 0.54 ATOM 4645 CE2 TRP 616 18.161 14.427 27.565 1.00 0.54 ATOM 4646 CE3 TRP 616 19.435 15.778 29.098 1.00 0.54 ATOM 4647 CZ2 TRP 616 18.661 13.268 28.089 1.00 0.54 ATOM 4648 CZ3 TRP 616 19.938 14.608 29.623 1.00 0.54 ATOM 4649 CH2 TRP 616 19.558 13.378 29.127 1.00 0.54 ATOM 4650 C TRP 616 19.128 18.487 25.373 1.00 0.54 ATOM 4651 O TRP 616 18.561 19.176 24.526 1.00 0.54 ATOM 4652 N ASN 617 19.799 17.348 25.075 1.00 0.51 ATOM 4653 CA ASN 617 19.902 16.698 23.791 1.00 0.51 ATOM 4654 CB ASN 617 18.557 16.186 23.242 1.00 0.51 ATOM 4655 CG ASN 617 18.227 14.869 23.926 1.00 0.51 ATOM 4656 OD1 ASN 617 19.101 14.211 24.489 1.00 0.51 ATOM 4657 ND2 ASN 617 16.932 14.459 23.862 1.00 0.51 ATOM 4658 C ASN 617 20.546 17.500 22.697 1.00 0.51 ATOM 4659 O ASN 617 20.045 17.512 21.574 1.00 0.51 ATOM 4660 N GLY 618 21.678 18.174 22.971 1.00 0.87 ATOM 4661 CA GLY 618 22.423 18.758 21.887 1.00 0.87 ATOM 4662 C GLY 618 21.958 20.130 21.514 1.00 0.87 ATOM 4663 O GLY 618 22.406 20.662 20.500 1.00 0.87 ATOM 4664 N ALA 619 21.070 20.758 22.305 1.00 0.96 ATOM 4665 CA ALA 619 20.658 22.075 21.914 1.00 0.96 ATOM 4666 CB ALA 619 19.627 22.712 22.862 1.00 0.96 ATOM 4667 C ALA 619 21.880 22.937 21.920 1.00 0.96 ATOM 4668 O ALA 619 22.720 22.833 22.812 1.00 0.96 ATOM 4669 N THR 620 22.024 23.793 20.887 1.00 0.84 ATOM 4670 CA THR 620 23.186 24.629 20.807 1.00 0.84 ATOM 4671 CB THR 620 24.148 24.185 19.745 1.00 0.84 ATOM 4672 OG1 THR 620 24.565 22.851 19.998 1.00 0.84 ATOM 4673 CG2 THR 620 25.362 25.127 19.745 1.00 0.84 ATOM 4674 C THR 620 22.743 26.022 20.477 1.00 0.84 ATOM 4675 O THR 620 21.801 26.215 19.707 1.00 0.84 ATOM 4676 N GLY 621 23.418 27.038 21.058 1.00 1.01 ATOM 4677 CA GLY 621 23.034 28.395 20.771 1.00 1.01 ATOM 4678 C GLY 621 23.844 29.333 21.617 1.00 1.01 ATOM 4679 O GLY 621 24.681 28.912 22.413 1.00 1.01 ATOM 4680 N LYS 622 23.602 30.652 21.455 1.00 0.51 ATOM 4681 CA LYS 622 24.353 31.651 22.162 1.00 0.51 ATOM 4682 CB LYS 622 24.501 32.970 21.387 1.00 0.51 ATOM 4683 CG LYS 622 25.364 32.850 20.128 1.00 0.51 ATOM 4684 CD LYS 622 25.216 34.034 19.168 1.00 0.51 ATOM 4685 CE LYS 622 25.937 35.305 19.625 1.00 0.51 ATOM 4686 NZ LYS 622 27.311 35.337 19.077 1.00 0.51 ATOM 4687 C LYS 622 23.724 31.949 23.490 1.00 0.51 ATOM 4688 O LYS 622 22.511 31.826 23.667 1.00 0.51 ATOM 4689 N CYS 623 24.571 32.342 24.469 1.00 0.75 ATOM 4690 CA CYS 623 24.115 32.656 25.794 1.00 0.75 ATOM 4691 CB CYS 623 23.936 31.398 26.667 1.00 0.75 ATOM 4692 SG CYS 623 23.353 31.744 28.355 1.00 0.75 ATOM 4693 C CYS 623 25.143 33.536 26.446 1.00 0.75 ATOM 4694 O CYS 623 26.276 33.639 25.977 1.00 0.75 ATOM 4695 N ILE 624 24.756 34.206 27.555 1.00 0.76 ATOM 4696 CA ILE 624 25.644 35.087 28.262 1.00 0.76 ATOM 4697 CB ILE 624 25.054 36.455 28.433 1.00 0.76 ATOM 4698 CG1 ILE 624 24.741 37.057 27.052 1.00 0.76 ATOM 4699 CG2 ILE 624 26.026 37.301 29.272 1.00 0.76 ATOM 4700 CD1 ILE 624 23.830 38.281 27.104 1.00 0.76 ATOM 4701 C ILE 624 25.871 34.506 29.627 1.00 0.76 ATOM 4702 O ILE 624 24.922 34.206 30.351 1.00 0.76 ATOM 4703 N PHE 625 27.153 34.321 30.011 1.00 0.53 ATOM 4704 CA PHE 625 27.457 33.729 31.281 1.00 0.53 ATOM 4705 CB PHE 625 28.209 32.397 31.095 1.00 0.53 ATOM 4706 CG PHE 625 28.567 31.823 32.416 1.00 0.53 ATOM 4707 CD1 PHE 625 27.608 31.635 33.383 1.00 0.53 ATOM 4708 CD2 PHE 625 29.858 31.419 32.663 1.00 0.53 ATOM 4709 CE1 PHE 625 27.940 31.087 34.599 1.00 0.53 ATOM 4710 CE2 PHE 625 30.194 30.869 33.876 1.00 0.53 ATOM 4711 CZ PHE 625 29.236 30.707 34.847 1.00 0.53 ATOM 4712 C PHE 625 28.297 34.677 32.079 1.00 0.53 ATOM 4713 O PHE 625 29.459 34.924 31.761 1.00 0.53 ATOM 4714 N GLY 626 27.717 35.238 33.158 1.00 1.04 ATOM 4715 CA GLY 626 28.459 36.131 33.997 1.00 1.04 ATOM 4716 C GLY 626 28.734 37.376 33.217 1.00 1.04 ATOM 4717 O GLY 626 29.653 38.129 33.538 1.00 1.04 ATOM 4718 N GLY 627 27.934 37.625 32.163 1.00 0.97 ATOM 4719 CA GLY 627 28.107 38.807 31.372 1.00 0.97 ATOM 4720 C GLY 627 28.980 38.506 30.186 1.00 0.97 ATOM 4721 O GLY 627 29.213 39.389 29.361 1.00 0.97 ATOM 4722 N ILE 628 29.474 37.257 30.042 1.00 0.51 ATOM 4723 CA ILE 628 30.362 36.977 28.943 1.00 0.51 ATOM 4724 CB ILE 628 31.560 36.171 29.350 1.00 0.51 ATOM 4725 CG1 ILE 628 32.356 36.930 30.425 1.00 0.51 ATOM 4726 CG2 ILE 628 32.382 35.863 28.087 1.00 0.51 ATOM 4727 CD1 ILE 628 32.842 38.303 29.965 1.00 0.51 ATOM 4728 C ILE 628 29.630 36.212 27.872 1.00 0.51 ATOM 4729 O ILE 628 29.021 35.176 28.135 1.00 0.51 ATOM 4730 N ASP 629 29.679 36.726 26.619 1.00 0.62 ATOM 4731 CA ASP 629 28.974 36.150 25.501 1.00 0.62 ATOM 4732 CB ASP 629 28.710 37.170 24.374 1.00 0.62 ATOM 4733 CG ASP 629 27.695 36.606 23.384 1.00 0.62 ATOM 4734 OD1 ASP 629 26.700 35.973 23.833 1.00 0.62 ATOM 4735 OD2 ASP 629 27.908 36.799 22.157 1.00 0.62 ATOM 4736 C ASP 629 29.734 34.999 24.901 1.00 0.62 ATOM 4737 O ASP 629 30.962 35.030 24.804 1.00 0.62 ATOM 4738 N GLY 630 29.004 33.957 24.434 1.00 0.90 ATOM 4739 CA GLY 630 29.661 32.826 23.835 1.00 0.90 ATOM 4740 C GLY 630 28.648 31.828 23.347 1.00 0.90 ATOM 4741 O GLY 630 27.439 32.044 23.421 1.00 0.90 ATOM 4742 N THR 631 29.149 30.681 22.835 1.00 0.86 ATOM 4743 CA THR 631 28.296 29.662 22.292 1.00 0.86 ATOM 4744 CB THR 631 28.738 29.182 20.938 1.00 0.86 ATOM 4745 OG1 THR 631 28.776 30.267 20.023 1.00 0.86 ATOM 4746 CG2 THR 631 27.751 28.111 20.447 1.00 0.86 ATOM 4747 C THR 631 28.309 28.483 23.213 1.00 0.86 ATOM 4748 O THR 631 29.351 28.092 23.739 1.00 0.86 ATOM 4749 N PHE 632 27.119 27.887 23.431 1.00 0.65 ATOM 4750 CA PHE 632 27.003 26.768 24.320 1.00 0.65 ATOM 4751 CB PHE 632 26.013 27.034 25.465 1.00 0.65 ATOM 4752 CG PHE 632 26.572 28.155 26.275 1.00 0.65 ATOM 4753 CD1 PHE 632 26.505 29.450 25.816 1.00 0.65 ATOM 4754 CD2 PHE 632 27.153 27.914 27.499 1.00 0.65 ATOM 4755 CE1 PHE 632 27.016 30.487 26.559 1.00 0.65 ATOM 4756 CE2 PHE 632 27.666 28.948 28.248 1.00 0.65 ATOM 4757 CZ PHE 632 27.601 30.237 27.777 1.00 0.65 ATOM 4758 C PHE 632 26.489 25.594 23.537 1.00 0.65 ATOM 4759 O PHE 632 25.586 25.738 22.715 1.00 0.65 ATOM 4760 N SER 633 27.073 24.395 23.765 1.00 0.53 ATOM 4761 CA SER 633 26.627 23.214 23.075 1.00 0.53 ATOM 4762 CB SER 633 27.608 22.699 22.010 1.00 0.53 ATOM 4763 OG SER 633 27.674 23.603 20.920 1.00 0.53 ATOM 4764 C SER 633 26.501 22.109 24.076 1.00 0.53 ATOM 4765 O SER 633 27.399 21.885 24.885 1.00 0.53 ATOM 4766 N THR 634 25.379 21.365 24.026 1.00 0.73 ATOM 4767 CA THR 634 25.169 20.321 24.986 1.00 0.73 ATOM 4768 CB THR 634 23.723 20.111 25.328 1.00 0.73 ATOM 4769 OG1 THR 634 23.171 21.305 25.860 1.00 0.73 ATOM 4770 CG2 THR 634 23.616 18.972 26.358 1.00 0.73 ATOM 4771 C THR 634 25.695 19.028 24.468 1.00 0.73 ATOM 4772 O THR 634 25.555 18.698 23.290 1.00 0.73 ATOM 4773 N THR 635 26.325 18.255 25.371 1.00 0.48 ATOM 4774 CA THR 635 26.826 16.971 25.001 1.00 0.48 ATOM 4775 CB THR 635 28.329 16.910 25.031 1.00 0.48 ATOM 4776 OG1 THR 635 28.785 15.770 24.326 1.00 0.48 ATOM 4777 CG2 THR 635 28.823 16.868 26.487 1.00 0.48 ATOM 4778 C THR 635 26.263 15.997 25.991 1.00 0.48 ATOM 4779 O THR 635 26.257 16.243 27.196 1.00 0.48 ATOM 4780 N LEU 636 25.735 14.862 25.502 1.00 0.74 ATOM 4781 CA LEU 636 25.214 13.894 26.420 1.00 0.74 ATOM 4782 CB LEU 636 24.036 13.071 25.867 1.00 0.74 ATOM 4783 CG LEU 636 22.766 13.900 25.601 1.00 0.74 ATOM 4784 CD1 LEU 636 21.631 13.019 25.054 1.00 0.74 ATOM 4785 CD2 LEU 636 22.351 14.702 26.845 1.00 0.74 ATOM 4786 C LEU 636 26.330 12.943 26.689 1.00 0.74 ATOM 4787 O LEU 636 27.101 12.611 25.790 1.00 0.74 ATOM 4788 N VAL 637 26.466 12.498 27.953 1.00 0.82 ATOM 4789 CA VAL 637 27.537 11.599 28.262 1.00 0.82 ATOM 4790 CB VAL 637 28.634 12.237 29.065 1.00 0.82 ATOM 4791 CG1 VAL 637 29.271 13.357 28.223 1.00 0.82 ATOM 4792 CG2 VAL 637 28.045 12.725 30.399 1.00 0.82 ATOM 4793 C VAL 637 26.987 10.481 29.087 1.00 0.82 ATOM 4794 O VAL 637 25.952 10.630 29.734 1.00 0.82 ATOM 4795 N ASN 638 27.685 9.324 29.066 1.00 0.72 ATOM 4796 CA ASN 638 27.318 8.167 29.834 1.00 0.72 ATOM 4797 CB ASN 638 27.645 8.307 31.331 1.00 0.72 ATOM 4798 CG ASN 638 29.160 8.286 31.469 1.00 0.72 ATOM 4799 OD1 ASN 638 29.825 7.364 30.998 1.00 0.72 ATOM 4800 ND2 ASN 638 29.726 9.334 32.127 1.00 0.72 ATOM 4801 C ASN 638 25.857 7.903 29.678 1.00 0.72 ATOM 4802 O ASN 638 25.100 7.968 30.644 1.00 0.72 ATOM 4803 N ALA 639 25.426 7.587 28.443 1.00 0.94 ATOM 4804 CA ALA 639 24.029 7.390 28.190 1.00 0.94 ATOM 4805 CB ALA 639 23.718 6.941 26.752 1.00 0.94 ATOM 4806 C ALA 639 23.497 6.348 29.119 1.00 0.94 ATOM 4807 O ALA 639 24.156 5.353 29.419 1.00 0.94 ATOM 4808 N GLY 640 22.262 6.588 29.604 1.00 1.04 ATOM 4809 CA GLY 640 21.578 5.709 30.505 1.00 1.04 ATOM 4810 C GLY 640 21.575 6.345 31.860 1.00 1.04 ATOM 4811 O GLY 640 20.617 6.193 32.619 1.00 1.04 ATOM 4812 N THR 641 22.668 7.055 32.209 1.00 0.84 ATOM 4813 CA THR 641 22.761 7.735 33.470 1.00 0.84 ATOM 4814 CB THR 641 24.156 8.183 33.802 1.00 0.84 ATOM 4815 OG1 THR 641 24.599 9.161 32.874 1.00 0.84 ATOM 4816 CG2 THR 641 25.081 6.955 33.762 1.00 0.84 ATOM 4817 C THR 641 21.880 8.950 33.454 1.00 0.84 ATOM 4818 O THR 641 21.223 9.260 34.446 1.00 0.84 ATOM 4819 N GLY 642 21.829 9.667 32.312 1.00 1.05 ATOM 4820 CA GLY 642 21.043 10.868 32.232 1.00 1.05 ATOM 4821 C GLY 642 21.944 12.057 32.399 1.00 1.05 ATOM 4822 O GLY 642 21.491 13.201 32.346 1.00 1.05 ATOM 4823 N GLU 643 23.256 11.821 32.595 1.00 0.86 ATOM 4824 CA GLU 643 24.185 12.900 32.786 1.00 0.86 ATOM 4825 CB GLU 643 25.602 12.417 33.147 1.00 0.86 ATOM 4826 CG GLU 643 26.608 13.549 33.355 1.00 0.86 ATOM 4827 CD GLU 643 27.961 12.927 33.675 1.00 0.86 ATOM 4828 OE1 GLU 643 28.065 11.672 33.635 1.00 0.86 ATOM 4829 OE2 GLU 643 28.913 13.704 33.958 1.00 0.86 ATOM 4830 C GLU 643 24.303 13.684 31.515 1.00 0.86 ATOM 4831 O GLU 643 24.317 13.125 30.419 1.00 0.86 ATOM 4832 N THR 644 24.374 15.025 31.644 1.00 0.50 ATOM 4833 CA THR 644 24.541 15.882 30.507 1.00 0.50 ATOM 4834 CB THR 644 23.266 16.539 30.065 1.00 0.50 ATOM 4835 OG1 THR 644 23.477 17.268 28.865 1.00 0.50 ATOM 4836 CG2 THR 644 22.769 17.471 31.184 1.00 0.50 ATOM 4837 C THR 644 25.508 16.958 30.892 1.00 0.50 ATOM 4838 O THR 644 25.603 17.335 32.060 1.00 0.50 ATOM 4839 N GLN 645 26.267 17.476 29.905 1.00 0.82 ATOM 4840 CA GLN 645 27.233 18.497 30.190 1.00 0.82 ATOM 4841 CB GLN 645 28.677 17.974 30.121 1.00 0.82 ATOM 4842 CG GLN 645 28.961 16.892 31.169 1.00 0.82 ATOM 4843 CD GLN 645 30.368 16.357 30.948 1.00 0.82 ATOM 4844 OE1 GLN 645 31.049 16.738 29.997 1.00 0.82 ATOM 4845 NE2 GLN 645 30.814 15.438 31.846 1.00 0.82 ATOM 4846 C GLN 645 27.073 19.571 29.157 1.00 0.82 ATOM 4847 O GLN 645 26.658 19.306 28.031 1.00 0.82 ATOM 4848 N LEU 646 27.378 20.830 29.528 1.00 0.66 ATOM 4849 CA LEU 646 27.229 21.904 28.590 1.00 0.66 ATOM 4850 CB LEU 646 26.299 23.010 29.123 1.00 0.66 ATOM 4851 CG LEU 646 26.027 24.161 28.140 1.00 0.66 ATOM 4852 CD1 LEU 646 25.287 23.662 26.889 1.00 0.66 ATOM 4853 CD2 LEU 646 25.290 25.316 28.838 1.00 0.66 ATOM 4854 C LEU 646 28.589 22.491 28.350 1.00 0.66 ATOM 4855 O LEU 646 29.310 22.808 29.293 1.00 0.66 ATOM 4856 N VAL 647 28.983 22.645 27.069 1.00 0.49 ATOM 4857 CA VAL 647 30.279 23.200 26.779 1.00 0.49 ATOM 4858 CB VAL 647 31.026 22.505 25.682 1.00 0.49 ATOM 4859 CG1 VAL 647 31.548 21.165 26.205 1.00 0.49 ATOM 4860 CG2 VAL 647 30.074 22.350 24.488 1.00 0.49 ATOM 4861 C VAL 647 30.116 24.622 26.357 1.00 0.49 ATOM 4862 O VAL 647 29.207 24.964 25.602 1.00 0.49 ATOM 4863 N PHE 648 31.022 25.488 26.854 1.00 0.49 ATOM 4864 CA PHE 648 30.965 26.895 26.590 1.00 0.49 ATOM 4865 CB PHE 648 30.708 27.669 27.904 1.00 0.49 ATOM 4866 CG PHE 648 30.952 29.140 27.824 1.00 0.49 ATOM 4867 CD1 PHE 648 30.387 29.936 26.855 1.00 0.49 ATOM 4868 CD2 PHE 648 31.712 29.735 28.805 1.00 0.49 ATOM 4869 CE1 PHE 648 30.628 31.293 26.842 1.00 0.49 ATOM 4870 CE2 PHE 648 31.953 31.088 28.799 1.00 0.49 ATOM 4871 CZ PHE 648 31.413 31.871 27.811 1.00 0.49 ATOM 4872 C PHE 648 32.230 27.342 25.924 1.00 0.49 ATOM 4873 O PHE 648 33.331 27.153 26.441 1.00 0.49 ATOM 4874 N THR 649 32.083 27.953 24.729 1.00 0.78 ATOM 4875 CA THR 649 33.206 28.465 23.996 1.00 0.78 ATOM 4876 CB THR 649 33.354 27.861 22.632 1.00 0.78 ATOM 4877 OG1 THR 649 33.498 26.451 22.737 1.00 0.78 ATOM 4878 CG2 THR 649 34.596 28.468 21.957 1.00 0.78 ATOM 4879 C THR 649 32.978 29.936 23.825 1.00 0.78 ATOM 4880 O THR 649 31.873 30.370 23.504 1.00 0.78 ATOM 4881 N ARG 650 34.024 30.754 24.039 1.00 0.47 ATOM 4882 CA ARG 650 33.836 32.176 23.962 1.00 0.47 ATOM 4883 CB ARG 650 34.892 32.977 24.735 1.00 0.47 ATOM 4884 CG ARG 650 34.741 32.795 26.245 1.00 0.47 ATOM 4885 CD ARG 650 35.740 33.602 27.065 1.00 0.47 ATOM 4886 NE ARG 650 35.636 35.018 26.620 1.00 0.47 ATOM 4887 CZ ARG 650 35.739 36.028 27.530 1.00 0.47 ATOM 4888 NH1 ARG 650 35.894 35.735 28.854 1.00 0.47 ATOM 4889 NH2 ARG 650 35.685 37.328 27.117 1.00 0.47 ATOM 4890 C ARG 650 33.814 32.632 22.535 1.00 0.47 ATOM 4891 O ARG 650 34.558 32.137 21.692 1.00 0.47 ATOM 4892 N ASP 651 32.882 33.560 22.233 1.00 0.67 ATOM 4893 CA ASP 651 32.737 34.152 20.932 1.00 0.67 ATOM 4894 CB ASP 651 31.373 34.830 20.723 1.00 0.67 ATOM 4895 CG ASP 651 30.347 33.714 20.553 1.00 0.67 ATOM 4896 OD1 ASP 651 30.775 32.541 20.385 1.00 0.67 ATOM 4897 OD2 ASP 651 29.126 34.019 20.583 1.00 0.67 ATOM 4898 C ASP 651 33.826 35.154 20.675 1.00 0.67 ATOM 4899 O ASP 651 34.219 35.347 19.525 1.00 0.67 ATOM 4900 N SER 652 34.311 35.849 21.730 1.00 0.57 ATOM 4901 CA SER 652 35.335 36.848 21.554 1.00 0.57 ATOM 4902 CB SER 652 34.832 38.282 21.786 1.00 0.57 ATOM 4903 OG SER 652 34.417 38.441 23.134 1.00 0.57 ATOM 4904 C SER 652 36.414 36.587 22.562 1.00 0.57 ATOM 4905 O SER 652 36.141 36.115 23.664 1.00 0.57 ATOM 4906 N ALA 653 37.684 36.885 22.206 1.00 0.79 ATOM 4907 CA ALA 653 38.763 36.568 23.100 1.00 0.79 ATOM 4908 CB ALA 653 40.145 36.871 22.494 1.00 0.79 ATOM 4909 C ALA 653 38.662 37.343 24.376 1.00 0.79 ATOM 4910 O ALA 653 38.590 36.742 25.446 1.00 0.79 ATOM 4911 N GLY 654 38.592 38.691 24.298 1.00 1.02 ATOM 4912 CA GLY 654 38.522 39.494 25.490 1.00 1.02 ATOM 4913 C GLY 654 39.632 39.069 26.405 1.00 1.02 ATOM 4914 O GLY 654 40.809 39.119 26.047 1.00 1.02 ATOM 4915 N SER 655 39.258 38.638 27.628 1.00 0.96 ATOM 4916 CA SER 655 40.193 38.145 28.599 1.00 0.96 ATOM 4917 CB SER 655 40.622 39.196 29.639 1.00 0.96 ATOM 4918 OG SER 655 39.512 39.578 30.437 1.00 0.96 ATOM 4919 C SER 655 39.505 37.038 29.342 1.00 0.96 ATOM 4920 O SER 655 38.301 36.834 29.190 1.00 0.96 ATOM 4921 N ALA 656 40.261 36.274 30.158 1.00 1.09 ATOM 4922 CA ALA 656 39.675 35.192 30.901 1.00 1.09 ATOM 4923 CB ALA 656 40.708 34.295 31.605 1.00 1.09 ATOM 4924 C ALA 656 38.790 35.787 31.950 1.00 1.09 ATOM 4925 O ALA 656 39.030 36.901 32.414 1.00 1.09 ATOM 4926 N VAL 657 37.724 35.058 32.344 1.00 0.51 ATOM 4927 CA VAL 657 36.798 35.597 33.300 1.00 0.51 ATOM 4928 CB VAL 657 35.444 35.860 32.709 1.00 0.51 ATOM 4929 CG1 VAL 657 34.888 34.530 32.167 1.00 0.51 ATOM 4930 CG2 VAL 657 34.551 36.496 33.789 1.00 0.51 ATOM 4931 C VAL 657 36.581 34.611 34.404 1.00 0.51 ATOM 4932 O VAL 657 36.536 33.403 34.180 1.00 0.51 ATOM 4933 N SER 658 36.424 35.121 35.641 1.00 0.84 ATOM 4934 CA SER 658 36.160 34.260 36.753 1.00 0.84 ATOM 4935 CB SER 658 36.902 34.666 38.039 1.00 0.84 ATOM 4936 OG SER 658 36.588 33.766 39.092 1.00 0.84 ATOM 4937 C SER 658 34.697 34.372 37.028 1.00 0.84 ATOM 4938 O SER 658 34.177 35.461 37.267 1.00 0.84 ATOM 4939 N VAL 659 33.989 33.228 36.991 1.00 0.47 ATOM 4940 CA VAL 659 32.570 33.210 37.202 1.00 0.47 ATOM 4941 CB VAL 659 31.827 32.718 36.001 1.00 0.47 ATOM 4942 CG1 VAL 659 31.805 33.812 34.927 1.00 0.47 ATOM 4943 CG2 VAL 659 32.572 31.464 35.517 1.00 0.47 ATOM 4944 C VAL 659 32.263 32.273 38.329 1.00 0.47 ATOM 4945 O VAL 659 32.861 31.205 38.447 1.00 0.47 ATOM 4946 N SER 660 31.280 32.650 39.172 1.00 0.53 ATOM 4947 CA SER 660 30.922 31.893 40.341 1.00 0.53 ATOM 4948 CB SER 660 29.838 32.552 41.210 1.00 0.53 ATOM 4949 OG SER 660 30.297 33.782 41.740 1.00 0.53 ATOM 4950 C SER 660 30.340 30.577 39.936 1.00 0.53 ATOM 4951 O SER 660 29.830 30.411 38.829 1.00 0.53 ATOM 4952 N THR 661 30.384 29.615 40.881 1.00 0.70 ATOM 4953 CA THR 661 29.948 28.261 40.682 1.00 0.70 ATOM 4954 CB THR 661 30.170 27.404 41.894 1.00 0.70 ATOM 4955 OG1 THR 661 31.548 27.385 42.236 1.00 0.70 ATOM 4956 CG2 THR 661 29.680 25.979 41.585 1.00 0.70 ATOM 4957 C THR 661 28.481 28.213 40.367 1.00 0.70 ATOM 4958 O THR 661 28.048 27.444 39.513 1.00 0.70 ATOM 4959 N THR 662 27.685 29.000 41.103 1.00 0.42 ATOM 4960 CA THR 662 26.251 29.110 41.039 1.00 0.42 ATOM 4961 CB THR 662 25.682 29.667 42.308 1.00 0.42 ATOM 4962 OG1 THR 662 24.265 29.632 42.261 1.00 0.42 ATOM 4963 CG2 THR 662 26.176 31.113 42.481 1.00 0.42 ATOM 4964 C THR 662 25.747 29.974 39.914 1.00 0.42 ATOM 4965 O THR 662 24.545 29.994 39.659 1.00 0.42 ATOM 4966 N ALA 663 26.619 30.762 39.258 1.00 0.63 ATOM 4967 CA ALA 663 26.218 31.783 38.316 1.00 0.63 ATOM 4968 CB ALA 663 27.409 32.412 37.570 1.00 0.63 ATOM 4969 C ALA 663 25.221 31.323 37.286 1.00 0.63 ATOM 4970 O ALA 663 25.193 30.166 36.867 1.00 0.63 ATOM 4971 N THR 664 24.352 32.281 36.871 1.00 0.72 ATOM 4972 CA THR 664 23.263 32.069 35.948 1.00 0.72 ATOM 4973 CB THR 664 22.081 32.952 36.233 1.00 0.72 ATOM 4974 OG1 THR 664 21.613 32.732 37.555 1.00 0.72 ATOM 4975 CG2 THR 664 20.968 32.637 35.220 1.00 0.72 ATOM 4976 C THR 664 23.676 32.337 34.526 1.00 0.72 ATOM 4977 O THR 664 24.518 33.189 34.245 1.00 0.72 ATOM 4978 N PHE 665 23.045 31.599 33.585 1.00 0.60 ATOM 4979 CA PHE 665 23.281 31.728 32.174 1.00 0.60 ATOM 4980 CB PHE 665 23.513 30.371 31.486 1.00 0.60 ATOM 4981 CG PHE 665 24.798 29.810 31.991 1.00 0.60 ATOM 4982 CD1 PHE 665 24.888 29.308 33.269 1.00 0.60 ATOM 4983 CD2 PHE 665 25.908 29.768 31.180 1.00 0.60 ATOM 4984 CE1 PHE 665 26.072 28.786 33.736 1.00 0.60 ATOM 4985 CE2 PHE 665 27.093 29.246 31.642 1.00 0.60 ATOM 4986 CZ PHE 665 27.178 28.755 32.922 1.00 0.60 ATOM 4987 C PHE 665 22.054 32.321 31.548 1.00 0.60 ATOM 4988 O PHE 665 20.973 31.730 31.597 1.00 0.60 ATOM 4989 N ALA 666 22.194 33.510 30.922 1.00 0.76 ATOM 4990 CA ALA 666 21.051 34.115 30.298 1.00 0.76 ATOM 4991 CB ALA 666 20.973 35.636 30.505 1.00 0.76 ATOM 4992 C ALA 666 21.177 33.864 28.827 1.00 0.76 ATOM 4993 O ALA 666 22.102 34.344 28.176 1.00 0.76 ATOM 4994 N MET 667 20.210 33.124 28.259 1.00 0.56 ATOM 4995 CA MET 667 20.268 32.713 26.885 1.00 0.56 ATOM 4996 CB MET 667 19.358 31.511 26.582 1.00 0.56 ATOM 4997 CG MET 667 19.744 30.229 27.320 1.00 0.56 ATOM 4998 SD MET 667 18.532 28.882 27.153 1.00 0.56 ATOM 4999 CE MET 667 18.820 28.604 25.382 1.00 0.56 ATOM 5000 C MET 667 19.819 33.813 25.977 1.00 0.56 ATOM 5001 O MET 667 19.055 34.690 26.372 1.00 0.56 ATOM 5002 N ARG 668 20.326 33.807 24.724 1.00 0.41 ATOM 5003 CA ARG 668 19.830 34.746 23.761 1.00 0.41 ATOM 5004 CB ARG 668 20.900 35.474 22.927 1.00 0.41 ATOM 5005 CG ARG 668 21.854 34.590 22.135 1.00 0.41 ATOM 5006 CD ARG 668 22.869 35.421 21.348 1.00 0.41 ATOM 5007 NE ARG 668 23.779 36.073 22.334 1.00 0.41 ATOM 5008 CZ ARG 668 23.477 37.306 22.835 1.00 0.41 ATOM 5009 NH1 ARG 668 22.332 37.940 22.445 1.00 0.41 ATOM 5010 NH2 ARG 668 24.323 37.909 23.721 1.00 0.41 ATOM 5011 C ARG 668 18.837 34.022 22.890 1.00 0.41 ATOM 5012 O ARG 668 18.879 32.799 22.777 1.00 0.41 TER PARENT N/A TER END