####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 563), selected 80 , name T1052TS062_1-D3 # Molecule2: number of CA atoms 80 ( 563), selected 80 , name T1052-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS062_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 3.38 3.38 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 639 - 668 1.97 3.53 LCS_AVERAGE: 28.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 589 - 608 0.93 3.64 LCS_AVERAGE: 13.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 589 T 589 20 22 80 9 17 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT R 590 R 590 20 22 80 9 18 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT Q 591 Q 591 20 22 80 9 17 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT Y 592 Y 592 20 22 80 9 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 593 A 593 20 22 80 9 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT P 594 P 594 20 22 80 9 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT V 595 V 595 20 22 80 6 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 596 G 596 20 22 80 7 19 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 597 G 597 20 22 80 5 19 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT S 598 S 598 20 22 80 8 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT I 599 I 599 20 22 80 8 17 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT P 600 P 600 20 22 80 10 17 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 601 A 601 20 22 80 4 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT S 602 S 602 20 22 80 8 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 603 G 603 20 22 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT S 604 S 604 20 22 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT V 605 V 605 20 22 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 606 A 606 20 22 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT L 607 L 607 20 22 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 608 T 608 20 22 80 8 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT P 609 P 609 15 22 80 3 11 26 39 52 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 610 T 610 4 22 80 3 4 5 9 23 32 45 55 64 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT E 611 E 611 4 21 80 3 12 19 30 45 52 63 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT V 612 V 612 4 10 80 3 4 6 10 24 32 42 55 59 66 69 72 77 80 80 80 80 80 80 80 LCS_GDT G 613 G 613 4 9 80 5 14 22 35 45 57 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT I 614 I 614 4 9 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT F 615 F 615 4 9 80 3 6 20 34 48 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT W 616 W 616 4 6 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT N 617 N 617 4 6 80 3 7 19 34 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 618 G 618 3 6 80 3 4 6 21 45 53 64 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 619 A 619 4 7 80 3 3 4 6 6 35 42 50 59 67 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 620 T 620 5 7 80 4 4 5 7 13 20 39 49 60 69 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 621 G 621 5 7 80 4 4 5 16 27 29 31 42 52 62 75 78 79 80 80 80 80 80 80 80 LCS_GDT K 622 K 622 5 7 80 4 4 5 6 27 29 31 39 46 59 75 78 79 80 80 80 80 80 80 80 LCS_GDT C 623 C 623 5 7 80 4 4 5 7 13 30 41 48 56 67 76 78 79 80 80 80 80 80 80 80 LCS_GDT I 624 I 624 5 7 80 4 4 5 6 7 16 31 42 53 65 76 78 79 80 80 80 80 80 80 80 LCS_GDT F 625 F 625 4 7 80 4 4 5 5 11 16 24 42 51 61 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 626 G 626 4 7 80 4 4 5 6 11 16 24 42 52 65 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 627 G 627 3 9 80 5 7 19 30 42 54 64 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT I 628 I 628 4 27 80 3 6 25 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT D 629 D 629 10 28 80 6 17 27 42 52 62 66 69 70 70 74 77 79 80 80 80 80 80 80 80 LCS_GDT G 630 G 630 10 28 80 6 17 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 631 T 631 10 28 80 6 17 31 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT F 632 F 632 10 28 80 4 15 25 33 49 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT S 633 S 633 10 28 80 4 15 25 40 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 634 T 634 10 28 80 4 15 22 37 49 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 635 T 635 10 28 80 4 15 22 37 51 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT L 636 L 636 10 28 80 3 15 27 40 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT V 637 V 637 10 28 80 3 18 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT N 638 N 638 10 28 80 3 18 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 639 A 639 6 30 80 3 4 7 17 19 29 56 67 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 640 G 640 10 30 80 5 7 19 35 49 61 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 641 T 641 10 30 80 5 9 23 38 49 61 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 642 G 642 10 30 80 5 14 28 41 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT E 643 E 643 12 30 80 6 17 28 41 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 644 T 644 12 30 80 5 16 30 44 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT Q 645 Q 645 12 30 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT L 646 L 646 12 30 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT V 647 V 647 12 30 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT F 648 F 648 12 30 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 649 T 649 12 30 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT R 650 R 650 12 30 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT D 651 D 651 12 30 80 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT S 652 S 652 12 30 80 3 18 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 653 A 653 12 30 80 7 19 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT G 654 G 654 12 30 80 3 15 29 39 48 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT S 655 S 655 8 30 80 5 16 30 44 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 656 A 656 8 30 80 6 19 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT V 657 V 657 8 30 80 5 17 30 44 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT S 658 S 658 8 30 80 5 18 30 44 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT V 659 V 659 8 30 80 4 16 30 44 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT S 660 S 660 8 30 80 5 14 25 39 49 61 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 661 T 661 8 30 80 3 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 662 T 662 8 30 80 5 18 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 663 A 663 8 30 80 6 16 32 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT T 664 T 664 8 30 80 4 12 31 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT F 665 F 665 8 30 80 4 18 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT A 666 A 666 8 30 80 4 15 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT M 667 M 667 8 30 80 3 18 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_GDT R 668 R 668 8 30 80 3 18 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 LCS_AVERAGE LCS_A: 47.49 ( 13.84 28.62 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 19 33 45 53 62 66 69 70 70 76 78 79 80 80 80 80 80 80 80 GDT PERCENT_AT 17.50 23.75 41.25 56.25 66.25 77.50 82.50 86.25 87.50 87.50 95.00 97.50 98.75 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.60 1.07 1.33 1.57 1.84 2.02 2.17 2.26 2.26 3.08 3.25 3.27 3.38 3.38 3.38 3.38 3.38 3.38 3.38 GDT RMS_ALL_AT 4.08 4.01 3.94 3.87 3.71 3.70 3.61 3.56 3.54 3.54 3.39 3.39 3.39 3.38 3.38 3.38 3.38 3.38 3.38 3.38 # Checking swapping # possible swapping detected: Y 592 Y 592 # possible swapping detected: F 615 F 615 # possible swapping detected: F 632 F 632 # possible swapping detected: F 665 F 665 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA T 589 T 589 2.207 0 0.083 0.127 3.450 32.727 29.091 3.450 LGA R 590 R 590 2.383 0 0.045 1.432 8.799 41.364 21.322 8.676 LGA Q 591 Q 591 2.193 0 0.056 1.263 5.183 41.364 30.101 5.183 LGA Y 592 Y 592 1.219 0 0.036 1.512 10.224 65.455 33.333 10.224 LGA A 593 A 593 1.455 0 0.074 0.112 1.825 65.455 62.545 - LGA P 594 P 594 0.997 0 0.049 0.405 1.892 69.545 63.636 1.892 LGA V 595 V 595 1.033 0 0.621 0.906 4.202 50.909 47.273 2.821 LGA G 596 G 596 1.011 0 0.135 0.135 1.759 65.909 65.909 - LGA G 597 G 597 1.287 0 0.252 0.252 1.866 61.818 61.818 - LGA S 598 S 598 0.694 0 0.065 0.717 2.702 73.636 67.273 2.702 LGA I 599 I 599 1.983 0 0.028 0.570 3.158 50.909 38.182 3.158 LGA P 600 P 600 1.801 0 0.089 0.157 2.095 47.727 45.455 2.095 LGA A 601 A 601 0.894 0 0.045 0.045 1.234 73.636 75.273 - LGA S 602 S 602 1.382 0 0.725 0.654 3.182 53.636 55.152 1.445 LGA G 603 G 603 1.585 0 0.039 0.039 1.790 58.182 58.182 - LGA S 604 S 604 0.849 0 0.080 0.757 2.222 65.909 63.939 2.222 LGA V 605 V 605 0.950 0 0.071 0.101 1.278 73.636 77.143 0.853 LGA A 606 A 606 0.933 0 0.063 0.103 1.215 73.636 75.273 - LGA L 607 L 607 0.929 0 0.027 1.117 4.156 73.636 60.227 4.156 LGA T 608 T 608 1.741 0 0.089 1.062 3.731 54.545 42.597 3.731 LGA P 609 P 609 2.921 0 0.056 0.370 5.435 35.909 20.779 5.435 LGA T 610 T 610 6.438 0 0.280 1.091 10.756 0.455 0.260 9.350 LGA E 611 E 611 4.282 0 0.096 1.268 7.990 1.364 21.010 3.237 LGA V 612 V 612 8.096 0 0.633 1.065 12.195 0.000 0.000 12.195 LGA G 613 G 613 3.885 0 0.133 0.133 5.347 28.636 28.636 - LGA I 614 I 614 1.538 0 0.553 0.919 5.548 49.545 30.227 5.548 LGA F 615 F 615 2.781 0 0.172 1.293 10.275 31.818 11.570 10.275 LGA W 616 W 616 1.966 0 0.234 1.226 12.529 70.000 20.779 12.529 LGA N 617 N 617 2.455 0 0.676 0.777 7.899 33.636 18.182 6.307 LGA G 618 G 618 3.998 0 0.695 0.695 4.578 7.273 7.273 - LGA A 619 A 619 7.974 0 0.638 0.611 10.357 0.000 0.000 - LGA T 620 T 620 7.647 0 0.640 0.596 7.873 0.000 0.000 6.521 LGA G 621 G 621 8.713 0 0.106 0.106 8.774 0.000 0.000 - LGA K 622 K 622 8.720 0 0.030 1.225 11.345 0.000 0.000 10.313 LGA C 623 C 623 7.866 0 0.222 0.734 8.540 0.000 0.000 7.002 LGA I 624 I 624 8.088 0 0.043 0.132 12.142 0.000 0.000 12.142 LGA F 625 F 625 8.335 0 0.103 1.235 15.961 0.000 0.000 15.961 LGA G 626 G 626 8.780 0 0.567 0.567 8.780 0.000 0.000 - LGA G 627 G 627 4.301 0 0.580 0.580 5.426 10.455 10.455 - LGA I 628 I 628 2.365 0 0.112 1.277 4.824 60.455 39.773 3.290 LGA D 629 D 629 2.982 0 0.322 1.064 5.666 32.727 16.818 5.666 LGA G 630 G 630 2.241 0 0.034 0.034 2.637 35.455 35.455 - LGA T 631 T 631 2.269 0 0.174 1.064 2.681 45.000 38.961 2.681 LGA F 632 F 632 2.947 0 0.233 1.131 10.517 19.545 8.760 10.517 LGA S 633 S 633 2.602 0 0.087 0.133 2.602 38.636 40.606 1.735 LGA T 634 T 634 2.940 0 0.088 1.063 5.622 20.909 21.818 5.622 LGA T 635 T 635 3.191 0 0.129 1.069 3.963 25.000 22.338 3.963 LGA L 636 L 636 2.388 0 0.132 0.141 3.665 32.727 25.682 3.097 LGA V 637 V 637 2.254 0 0.667 0.781 3.419 36.364 32.727 2.328 LGA N 638 N 638 2.576 0 0.096 0.165 7.060 20.455 12.727 3.243 LGA A 639 A 639 6.038 0 0.038 0.048 7.995 2.727 2.182 - LGA G 640 G 640 3.787 0 0.102 0.102 3.981 10.909 10.909 - LGA T 641 T 641 3.492 0 0.088 0.101 3.938 20.909 18.701 3.062 LGA G 642 G 642 2.386 0 0.079 0.079 2.833 35.455 35.455 - LGA E 643 E 643 1.750 0 0.056 0.458 2.391 54.545 49.697 1.508 LGA T 644 T 644 1.139 0 0.035 0.167 2.864 69.545 56.364 2.397 LGA Q 645 Q 645 0.428 0 0.084 0.693 4.508 90.909 66.869 1.601 LGA L 646 L 646 0.989 0 0.048 0.805 2.850 77.727 70.909 0.615 LGA V 647 V 647 0.867 0 0.034 0.981 2.472 81.818 71.169 1.840 LGA F 648 F 648 1.117 0 0.032 0.108 1.288 65.455 65.455 1.232 LGA T 649 T 649 1.066 0 0.111 0.126 1.566 61.818 65.714 0.994 LGA R 650 R 650 1.885 0 0.105 1.441 2.653 50.909 48.099 2.355 LGA D 651 D 651 1.647 0 0.046 1.093 4.276 47.727 42.273 2.052 LGA S 652 S 652 2.081 0 0.253 0.739 3.302 51.364 40.303 3.302 LGA A 653 A 653 0.504 0 0.037 0.046 1.519 74.545 72.727 - LGA G 654 G 654 2.949 0 0.575 0.575 2.949 48.636 48.636 - LGA S 655 S 655 1.900 0 0.099 0.169 2.897 47.727 40.909 2.897 LGA A 656 A 656 1.084 0 0.037 0.044 1.640 61.818 65.818 - LGA V 657 V 657 1.624 0 0.078 0.109 2.466 61.818 51.688 2.221 LGA S 658 S 658 1.668 0 0.070 0.705 2.313 50.909 48.788 2.313 LGA V 659 V 659 2.135 0 0.124 0.139 2.259 44.545 43.636 2.135 LGA S 660 S 660 3.126 0 0.558 0.754 4.666 16.364 14.848 3.379 LGA T 661 T 661 1.396 0 0.416 0.535 2.815 55.909 46.753 2.236 LGA T 662 T 662 2.412 0 0.219 1.209 3.739 30.455 28.312 3.739 LGA A 663 A 663 2.436 0 0.028 0.049 2.436 41.364 40.727 - LGA T 664 T 664 2.410 0 0.046 0.983 4.453 38.636 32.727 1.733 LGA F 665 F 665 0.811 0 0.024 0.302 2.655 77.727 66.116 2.368 LGA A 666 A 666 1.170 0 0.030 0.052 1.368 65.455 65.455 - LGA M 667 M 667 1.176 0 0.039 0.210 1.882 65.455 60.000 1.882 LGA R 668 R 668 0.961 0 0.123 1.681 10.739 77.727 38.678 10.739 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 80 320 320 100.00 563 563 100.00 80 59 SUMMARY(RMSD_GDC): 3.381 3.303 4.410 42.636 36.856 24.807 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 69 2.17 66.562 61.888 3.041 LGA_LOCAL RMSD: 2.169 Number of atoms: 69 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.564 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 3.381 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.224808 * X + 0.963435 * Y + -0.145786 * Z + -24.453239 Y_new = -0.133228 * X + 0.178602 * Y + 0.974860 * Z + 24.952820 Z_new = 0.965252 * X + -0.199733 * Y + 0.168507 * Z + 7.517657 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.534982 -1.306407 -0.869994 [DEG: -30.6522 -74.8516 -49.8470 ] ZXZ: -2.993147 1.401481 1.774840 [DEG: -171.4947 80.2990 101.6909 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1052TS062_1-D3 REMARK 2: T1052-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS062_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 69 2.17 61.888 3.38 REMARK ---------------------------------------------------------- MOLECULE T1052TS062_1-D3 PFRMAT TS TARGET T1052 MODEL 1 PARENT N/A ATOM 4450 N THR 589 15.929 30.177 31.897 1.00 3.30 ATOM 4451 CA THR 589 17.229 30.451 32.461 1.00 3.30 ATOM 4452 CB THR 589 17.247 31.544 33.495 1.00 3.30 ATOM 4453 OG1 THR 589 16.430 31.194 34.602 1.00 3.30 ATOM 4454 CG2 THR 589 16.745 32.850 32.853 1.00 3.30 ATOM 4455 C THR 589 17.669 29.182 33.141 1.00 3.30 ATOM 4456 O THR 589 16.844 28.423 33.646 1.00 3.30 ATOM 4457 N ARG 590 19.000 28.941 33.168 1.00 3.50 ATOM 4458 CA ARG 590 19.604 27.721 33.645 1.00 3.50 ATOM 4459 CB ARG 590 20.182 26.998 32.414 1.00 3.50 ATOM 4460 CG ARG 590 20.898 25.667 32.594 1.00 3.50 ATOM 4461 CD ARG 590 21.872 25.398 31.439 1.00 3.50 ATOM 4462 NE ARG 590 21.153 25.657 30.159 1.00 3.50 ATOM 4463 CZ ARG 590 21.752 26.351 29.145 1.00 3.50 ATOM 4464 NH1 ARG 590 23.035 26.800 29.272 1.00 3.50 ATOM 4465 NH2 ARG 590 21.062 26.606 27.995 1.00 3.50 ATOM 4466 C ARG 590 20.779 28.109 34.518 1.00 3.50 ATOM 4467 O ARG 590 21.361 29.171 34.303 1.00 3.50 ATOM 4468 N GLN 591 21.162 27.273 35.528 1.00 3.80 ATOM 4469 CA GLN 591 22.326 27.615 36.318 1.00 3.80 ATOM 4470 CB GLN 591 22.107 27.684 37.840 1.00 3.80 ATOM 4471 CG GLN 591 21.280 28.909 38.240 1.00 3.80 ATOM 4472 CD GLN 591 21.406 29.130 39.740 1.00 3.80 ATOM 4473 OE1 GLN 591 21.945 28.293 40.463 1.00 3.80 ATOM 4474 NE2 GLN 591 20.902 30.298 40.221 1.00 3.80 ATOM 4475 C GLN 591 23.433 26.648 35.997 1.00 3.80 ATOM 4476 O GLN 591 23.173 25.456 35.815 1.00 3.80 ATOM 4477 N TYR 592 24.696 27.162 35.893 1.00 3.80 ATOM 4478 CA TYR 592 25.838 26.367 35.508 1.00 3.80 ATOM 4479 CB TYR 592 26.288 26.617 34.049 1.00 3.80 ATOM 4480 CG TYR 592 26.845 27.998 33.911 1.00 3.80 ATOM 4481 CD1 TYR 592 26.025 29.074 33.654 1.00 3.80 ATOM 4482 CD2 TYR 592 28.196 28.219 34.042 1.00 3.80 ATOM 4483 CE1 TYR 592 26.546 30.342 33.529 1.00 3.80 ATOM 4484 CE2 TYR 592 28.725 29.482 33.916 1.00 3.80 ATOM 4485 CZ TYR 592 27.900 30.548 33.658 1.00 3.80 ATOM 4486 OH TYR 592 28.439 31.846 33.528 1.00 3.80 ATOM 4487 C TYR 592 27.012 26.632 36.416 1.00 3.80 ATOM 4488 O TYR 592 27.137 27.712 36.997 1.00 3.80 ATOM 4489 N ALA 593 27.886 25.603 36.583 1.00 4.20 ATOM 4490 CA ALA 593 29.100 25.733 37.346 1.00 4.20 ATOM 4491 CB ALA 593 29.152 24.810 38.575 1.00 4.20 ATOM 4492 C ALA 593 30.239 25.342 36.436 1.00 4.20 ATOM 4493 O ALA 593 30.308 24.198 35.985 1.00 4.20 ATOM 4494 N PRO 594 31.148 26.252 36.147 1.00 4.50 ATOM 4495 CA PRO 594 32.265 25.880 35.320 1.00 4.50 ATOM 4496 CD PRO 594 30.776 27.645 35.948 1.00 4.50 ATOM 4497 CB PRO 594 32.910 27.188 34.869 1.00 4.50 ATOM 4498 CG PRO 594 31.734 28.181 34.866 1.00 4.50 ATOM 4499 C PRO 594 33.138 25.041 36.187 1.00 4.50 ATOM 4500 O PRO 594 33.245 25.348 37.375 1.00 4.50 ATOM 4501 N VAL 595 33.800 24.017 35.614 1.00 5.30 ATOM 4502 CA VAL 595 34.556 23.109 36.426 1.00 5.30 ATOM 4503 CB VAL 595 35.216 22.033 35.612 1.00 5.30 ATOM 4504 CG1 VAL 595 36.096 22.685 34.532 1.00 5.30 ATOM 4505 CG2 VAL 595 35.994 21.117 36.569 1.00 5.30 ATOM 4506 C VAL 595 35.612 23.857 37.198 1.00 5.30 ATOM 4507 O VAL 595 35.746 23.653 38.403 1.00 5.30 ATOM 4508 N GLY 596 36.422 24.687 36.504 1.00 5.70 ATOM 4509 CA GLY 596 37.497 25.481 37.050 1.00 5.70 ATOM 4510 C GLY 596 37.070 26.744 37.753 1.00 5.70 ATOM 4511 O GLY 596 37.787 27.234 38.622 1.00 5.70 ATOM 4512 N GLY 597 35.961 27.389 37.340 1.00 6.20 ATOM 4513 CA GLY 597 35.643 28.655 37.944 1.00 6.20 ATOM 4514 C GLY 597 35.994 29.711 36.935 1.00 6.20 ATOM 4515 O GLY 597 35.181 30.596 36.666 1.00 6.20 ATOM 4516 N SER 598 37.195 29.605 36.309 1.00 6.50 ATOM 4517 CA SER 598 37.638 30.568 35.333 1.00 6.50 ATOM 4518 CB SER 598 39.063 31.091 35.584 1.00 6.50 ATOM 4519 OG SER 598 39.111 31.808 36.808 1.00 6.50 ATOM 4520 C SER 598 37.643 29.885 33.995 1.00 6.50 ATOM 4521 O SER 598 37.991 28.707 33.902 1.00 6.50 ATOM 4522 N ILE 599 37.242 30.624 32.932 1.00 6.40 ATOM 4523 CA ILE 599 37.181 30.118 31.582 1.00 6.40 ATOM 4524 CB ILE 599 35.996 30.620 30.796 1.00 6.40 ATOM 4525 CG1 ILE 599 34.670 30.199 31.455 1.00 6.40 ATOM 4526 CG2 ILE 599 36.135 30.116 29.350 1.00 6.40 ATOM 4527 CD1 ILE 599 34.374 30.927 32.765 1.00 6.40 ATOM 4528 C ILE 599 38.417 30.618 30.880 1.00 6.40 ATOM 4529 O ILE 599 38.699 31.818 30.895 1.00 6.40 ATOM 4530 N PRO 600 39.170 29.722 30.277 1.00 7.00 ATOM 4531 CA PRO 600 40.383 30.073 29.573 1.00 7.00 ATOM 4532 CD PRO 600 38.633 28.447 29.828 1.00 7.00 ATOM 4533 CB PRO 600 40.867 28.775 28.935 1.00 7.00 ATOM 4534 CG PRO 600 39.555 28.008 28.677 1.00 7.00 ATOM 4535 C PRO 600 39.998 31.067 28.527 1.00 7.00 ATOM 4536 O PRO 600 38.919 30.914 27.955 1.00 7.00 ATOM 4537 N ALA 601 40.884 32.045 28.231 1.00 7.70 ATOM 4538 CA ALA 601 40.577 33.151 27.368 1.00 7.70 ATOM 4539 CB ALA 601 41.756 34.130 27.224 1.00 7.70 ATOM 4540 C ALA 601 40.196 32.708 25.977 1.00 7.70 ATOM 4541 O ALA 601 39.277 33.281 25.391 1.00 7.70 ATOM 4542 N SER 602 40.939 31.759 25.365 1.00 7.30 ATOM 4543 CA SER 602 40.640 31.365 24.008 1.00 7.30 ATOM 4544 CB SER 602 41.908 31.256 23.141 1.00 7.30 ATOM 4545 OG SER 602 42.730 30.194 23.602 1.00 7.30 ATOM 4546 C SER 602 39.878 30.078 23.805 1.00 7.30 ATOM 4547 O SER 602 39.402 29.842 22.694 1.00 7.30 ATOM 4548 N GLY 603 39.761 29.185 24.810 1.00 6.40 ATOM 4549 CA GLY 603 39.247 27.879 24.471 1.00 6.40 ATOM 4550 C GLY 603 37.797 27.691 24.811 1.00 6.40 ATOM 4551 O GLY 603 37.012 28.640 24.908 1.00 6.40 ATOM 4552 N SER 604 37.431 26.390 24.948 1.00 5.60 ATOM 4553 CA SER 604 36.126 25.931 25.329 1.00 5.60 ATOM 4554 CB SER 604 35.481 24.951 24.332 1.00 5.60 ATOM 4555 OG SER 604 36.277 23.785 24.202 1.00 5.60 ATOM 4556 C SER 604 36.289 25.235 26.653 1.00 5.60 ATOM 4557 O SER 604 37.257 24.498 26.855 1.00 5.60 ATOM 4558 N VAL 605 35.342 25.478 27.590 1.00 5.20 ATOM 4559 CA VAL 605 35.382 24.927 28.915 1.00 5.20 ATOM 4560 CB VAL 605 35.427 25.984 29.983 1.00 5.20 ATOM 4561 CG1 VAL 605 34.157 26.846 29.877 1.00 5.20 ATOM 4562 CG2 VAL 605 35.608 25.304 31.353 1.00 5.20 ATOM 4563 C VAL 605 34.126 24.125 29.115 1.00 5.20 ATOM 4564 O VAL 605 33.114 24.372 28.456 1.00 5.20 ATOM 4565 N ALA 606 34.185 23.112 30.012 1.00 5.20 ATOM 4566 CA ALA 606 33.054 22.273 30.308 1.00 5.20 ATOM 4567 CB ALA 606 33.423 20.795 30.530 1.00 5.20 ATOM 4568 C ALA 606 32.438 22.775 31.583 1.00 5.20 ATOM 4569 O ALA 606 33.152 23.115 32.531 1.00 5.20 ATOM 4570 N LEU 607 31.082 22.849 31.608 1.00 4.60 ATOM 4571 CA LEU 607 30.336 23.306 32.747 1.00 4.60 ATOM 4572 CB LEU 607 29.477 24.566 32.502 1.00 4.60 ATOM 4573 CG LEU 607 30.175 25.756 31.811 1.00 4.60 ATOM 4574 CD1 LEU 607 31.551 26.061 32.411 1.00 4.60 ATOM 4575 CD2 LEU 607 30.161 25.631 30.285 1.00 4.60 ATOM 4576 C LEU 607 29.336 22.228 33.090 1.00 4.60 ATOM 4577 O LEU 607 28.843 21.516 32.210 1.00 4.60 ATOM 4578 N THR 608 29.012 22.091 34.400 1.00 5.00 ATOM 4579 CA THR 608 28.040 21.123 34.841 1.00 5.00 ATOM 4580 CB THR 608 28.498 20.336 36.036 1.00 5.00 ATOM 4581 OG1 THR 608 29.717 19.669 35.742 1.00 5.00 ATOM 4582 CG2 THR 608 27.409 19.312 36.400 1.00 5.00 ATOM 4583 C THR 608 26.828 21.913 35.254 1.00 5.00 ATOM 4584 O THR 608 26.945 22.870 36.021 1.00 5.00 ATOM 4585 N PRO 609 25.663 21.563 34.746 1.00 5.00 ATOM 4586 CA PRO 609 24.488 22.318 35.099 1.00 5.00 ATOM 4587 CD PRO 609 25.568 21.031 33.393 1.00 5.00 ATOM 4588 CB PRO 609 23.438 22.011 34.035 1.00 5.00 ATOM 4589 CG PRO 609 24.266 21.610 32.812 1.00 5.00 ATOM 4590 C PRO 609 23.970 22.020 36.467 1.00 5.00 ATOM 4591 O PRO 609 24.074 20.873 36.902 1.00 5.00 ATOM 4592 N THR 610 23.444 23.067 37.144 1.00 5.30 ATOM 4593 CA THR 610 22.610 22.917 38.299 1.00 5.30 ATOM 4594 CB THR 610 22.619 24.115 39.204 1.00 5.30 ATOM 4595 OG1 THR 610 23.938 24.367 39.668 1.00 5.30 ATOM 4596 CG2 THR 610 21.678 23.855 40.393 1.00 5.30 ATOM 4597 C THR 610 21.337 22.919 37.521 1.00 5.30 ATOM 4598 O THR 610 20.700 23.958 37.315 1.00 5.30 ATOM 4599 N GLU 611 21.021 21.708 37.021 1.00 6.00 ATOM 4600 CA GLU 611 20.036 21.402 36.026 1.00 6.00 ATOM 4601 CB GLU 611 20.021 19.916 35.628 1.00 6.00 ATOM 4602 CG GLU 611 19.090 19.622 34.454 1.00 6.00 ATOM 4603 CD GLU 611 19.683 20.283 33.218 1.00 6.00 ATOM 4604 OE1 GLU 611 20.566 19.655 32.577 1.00 6.00 ATOM 4605 OE2 GLU 611 19.263 21.428 32.902 1.00 6.00 ATOM 4606 C GLU 611 18.662 21.788 36.444 1.00 6.00 ATOM 4607 O GLU 611 18.273 21.594 37.592 1.00 6.00 ATOM 4608 N VAL 612 17.991 22.536 35.543 1.00 6.00 ATOM 4609 CA VAL 612 16.596 22.875 35.508 1.00 6.00 ATOM 4610 CB VAL 612 16.369 24.255 34.963 1.00 6.00 ATOM 4611 CG1 VAL 612 17.059 25.254 35.907 1.00 6.00 ATOM 4612 CG2 VAL 612 16.887 24.315 33.518 1.00 6.00 ATOM 4613 C VAL 612 15.875 21.885 34.628 1.00 6.00 ATOM 4614 O VAL 612 14.651 21.775 34.707 1.00 6.00 ATOM 4615 N GLY 613 16.618 21.163 33.740 1.00 5.90 ATOM 4616 CA GLY 613 16.006 20.253 32.798 1.00 5.90 ATOM 4617 C GLY 613 16.161 20.711 31.359 1.00 5.90 ATOM 4618 O GLY 613 15.264 20.461 30.556 1.00 5.90 ATOM 4619 N ILE 614 17.291 21.365 30.972 1.00 4.80 ATOM 4620 CA ILE 614 17.406 21.813 29.600 1.00 4.80 ATOM 4621 CB ILE 614 18.230 23.057 29.485 1.00 4.80 ATOM 4622 CG1 ILE 614 17.492 24.164 30.261 1.00 4.80 ATOM 4623 CG2 ILE 614 18.448 23.387 27.998 1.00 4.80 ATOM 4624 CD1 ILE 614 18.321 25.405 30.543 1.00 4.80 ATOM 4625 C ILE 614 17.981 20.685 28.769 1.00 4.80 ATOM 4626 O ILE 614 19.164 20.675 28.418 1.00 4.80 ATOM 4627 N PHE 615 17.101 19.742 28.337 1.00 5.00 ATOM 4628 CA PHE 615 17.613 18.512 27.789 1.00 5.00 ATOM 4629 CB PHE 615 16.850 17.255 28.257 1.00 5.00 ATOM 4630 CG PHE 615 17.185 16.968 29.680 1.00 5.00 ATOM 4631 CD1 PHE 615 18.272 16.181 29.987 1.00 5.00 ATOM 4632 CD2 PHE 615 16.425 17.476 30.708 1.00 5.00 ATOM 4633 CE1 PHE 615 18.594 15.903 31.293 1.00 5.00 ATOM 4634 CE2 PHE 615 16.743 17.200 32.018 1.00 5.00 ATOM 4635 CZ PHE 615 17.829 16.412 32.313 1.00 5.00 ATOM 4636 C PHE 615 17.676 18.384 26.296 1.00 5.00 ATOM 4637 O PHE 615 16.880 17.634 25.744 1.00 5.00 ATOM 4638 N TRP 616 18.673 18.977 25.593 1.00 5.70 ATOM 4639 CA TRP 616 18.695 18.669 24.181 1.00 5.70 ATOM 4640 CB TRP 616 19.451 19.687 23.314 1.00 5.70 ATOM 4641 CG TRP 616 19.329 19.401 21.837 1.00 5.70 ATOM 4642 CD2 TRP 616 18.486 20.141 20.939 1.00 5.70 ATOM 4643 CD1 TRP 616 19.973 18.468 21.080 1.00 5.70 ATOM 4644 NE1 TRP 616 19.574 18.570 19.768 1.00 5.70 ATOM 4645 CE2 TRP 616 18.661 19.598 19.666 1.00 5.70 ATOM 4646 CE3 TRP 616 17.638 21.188 21.159 1.00 5.70 ATOM 4647 CZ2 TRP 616 17.987 20.096 18.587 1.00 5.70 ATOM 4648 CZ3 TRP 616 16.959 21.684 20.069 1.00 5.70 ATOM 4649 CH2 TRP 616 17.129 21.150 18.807 1.00 5.70 ATOM 4650 C TRP 616 19.488 17.387 24.121 1.00 5.70 ATOM 4651 O TRP 616 20.718 17.408 24.110 1.00 5.70 ATOM 4652 N ASN 617 18.793 16.229 24.091 1.00 6.10 ATOM 4653 CA ASN 617 19.435 14.937 24.188 1.00 6.10 ATOM 4654 CB ASN 617 18.460 13.820 24.587 1.00 6.10 ATOM 4655 CG ASN 617 18.129 14.064 26.055 1.00 6.10 ATOM 4656 OD1 ASN 617 18.923 14.655 26.787 1.00 6.10 ATOM 4657 ND2 ASN 617 16.932 13.602 26.502 1.00 6.10 ATOM 4658 C ASN 617 20.202 14.517 22.971 1.00 6.10 ATOM 4659 O ASN 617 21.152 13.745 23.118 1.00 6.10 ATOM 4660 N GLY 618 19.791 14.958 21.758 1.00 7.50 ATOM 4661 CA GLY 618 20.470 14.572 20.541 1.00 7.50 ATOM 4662 C GLY 618 21.865 15.118 20.661 1.00 7.50 ATOM 4663 O GLY 618 22.066 16.210 21.189 1.00 7.50 ATOM 4664 N ALA 619 22.849 14.375 20.109 1.00 8.90 ATOM 4665 CA ALA 619 24.266 14.598 20.249 1.00 8.90 ATOM 4666 CB ALA 619 25.104 13.523 19.536 1.00 8.90 ATOM 4667 C ALA 619 24.727 15.932 19.724 1.00 8.90 ATOM 4668 O ALA 619 25.577 16.563 20.352 1.00 8.90 ATOM 4669 N THR 620 24.212 16.392 18.563 1.00 8.50 ATOM 4670 CA THR 620 24.661 17.628 17.967 1.00 8.50 ATOM 4671 CB THR 620 24.060 17.868 16.611 1.00 8.50 ATOM 4672 OG1 THR 620 22.649 17.994 16.705 1.00 8.50 ATOM 4673 CG2 THR 620 24.427 16.686 15.695 1.00 8.50 ATOM 4674 C THR 620 24.276 18.779 18.848 1.00 8.50 ATOM 4675 O THR 620 25.019 19.756 18.927 1.00 8.50 ATOM 4676 N GLY 621 23.075 18.709 19.469 1.00 7.30 ATOM 4677 CA GLY 621 22.608 19.634 20.468 1.00 7.30 ATOM 4678 C GLY 621 22.125 20.956 19.935 1.00 7.30 ATOM 4679 O GLY 621 21.659 21.080 18.796 1.00 7.30 ATOM 4680 N LYS 622 22.219 21.971 20.839 1.00 7.30 ATOM 4681 CA LYS 622 21.736 23.317 20.693 1.00 7.30 ATOM 4682 CB LYS 622 20.644 23.619 21.742 1.00 7.30 ATOM 4683 CG LYS 622 19.805 24.880 21.527 1.00 7.30 ATOM 4684 CD LYS 622 18.576 24.914 22.443 1.00 7.30 ATOM 4685 CE LYS 622 17.693 26.152 22.274 1.00 7.30 ATOM 4686 NZ LYS 622 18.425 27.366 22.700 1.00 7.30 ATOM 4687 C LYS 622 22.855 24.299 20.914 1.00 7.30 ATOM 4688 O LYS 622 23.736 24.064 21.744 1.00 7.30 ATOM 4689 N CYS 623 22.821 25.422 20.144 1.00 5.80 ATOM 4690 CA CYS 623 23.762 26.517 20.210 1.00 5.80 ATOM 4691 CB CYS 623 24.331 26.911 18.834 1.00 5.80 ATOM 4692 SG CYS 623 25.518 28.283 18.928 1.00 5.80 ATOM 4693 C CYS 623 23.006 27.702 20.746 1.00 5.80 ATOM 4694 O CYS 623 22.025 28.146 20.141 1.00 5.80 ATOM 4695 N ILE 624 23.469 28.226 21.910 1.00 5.80 ATOM 4696 CA ILE 624 22.825 29.299 22.625 1.00 5.80 ATOM 4697 CB ILE 624 22.276 28.786 23.924 1.00 5.80 ATOM 4698 CG1 ILE 624 21.337 27.604 23.623 1.00 5.80 ATOM 4699 CG2 ILE 624 21.596 29.942 24.679 1.00 5.80 ATOM 4700 CD1 ILE 624 21.106 26.664 24.803 1.00 5.80 ATOM 4701 C ILE 624 23.832 30.381 22.931 1.00 5.80 ATOM 4702 O ILE 624 24.921 30.107 23.446 1.00 5.80 ATOM 4703 N PHE 625 23.471 31.650 22.613 1.00 6.60 ATOM 4704 CA PHE 625 24.280 32.807 22.910 1.00 6.60 ATOM 4705 CB PHE 625 24.263 33.881 21.809 1.00 6.60 ATOM 4706 CG PHE 625 24.931 33.313 20.603 1.00 6.60 ATOM 4707 CD1 PHE 625 24.213 32.573 19.692 1.00 6.60 ATOM 4708 CD2 PHE 625 26.274 33.522 20.387 1.00 6.60 ATOM 4709 CE1 PHE 625 24.828 32.049 18.580 1.00 6.60 ATOM 4710 CE2 PHE 625 26.894 33.002 19.276 1.00 6.60 ATOM 4711 CZ PHE 625 26.170 32.263 18.371 1.00 6.60 ATOM 4712 C PHE 625 23.645 33.418 24.130 1.00 6.60 ATOM 4713 O PHE 625 22.418 33.467 24.213 1.00 6.60 ATOM 4714 N GLY 626 24.450 33.875 25.125 1.00 7.20 ATOM 4715 CA GLY 626 23.826 34.457 26.291 1.00 7.20 ATOM 4716 C GLY 626 24.889 34.892 27.270 1.00 7.20 ATOM 4717 O GLY 626 26.052 34.546 27.108 1.00 7.20 ATOM 4718 N GLY 627 24.535 35.797 28.217 1.00 7.10 ATOM 4719 CA GLY 627 25.279 36.120 29.424 1.00 7.10 ATOM 4720 C GLY 627 26.668 36.656 29.227 1.00 7.10 ATOM 4721 O GLY 627 26.906 37.590 28.465 1.00 7.10 ATOM 4722 N ILE 628 27.616 36.038 29.989 1.00 7.50 ATOM 4723 CA ILE 628 29.036 36.271 29.958 1.00 7.50 ATOM 4724 CB ILE 628 29.758 35.267 30.825 1.00 7.50 ATOM 4725 CG1 ILE 628 31.281 35.447 30.827 1.00 7.50 ATOM 4726 CG2 ILE 628 29.316 33.867 30.375 1.00 7.50 ATOM 4727 CD1 ILE 628 31.953 34.987 29.535 1.00 7.50 ATOM 4728 C ILE 628 29.409 36.077 28.513 1.00 7.50 ATOM 4729 O ILE 628 28.838 35.223 27.834 1.00 7.50 ATOM 4730 N ASP 629 30.366 36.900 28.029 1.00 8.80 ATOM 4731 CA ASP 629 30.797 37.084 26.663 1.00 8.80 ATOM 4732 CB ASP 629 32.031 38.015 26.611 1.00 8.80 ATOM 4733 CG ASP 629 32.340 38.478 25.192 1.00 8.80 ATOM 4734 OD1 ASP 629 31.809 37.875 24.226 1.00 8.80 ATOM 4735 OD2 ASP 629 33.125 39.455 25.061 1.00 8.80 ATOM 4736 C ASP 629 31.145 35.817 25.915 1.00 8.80 ATOM 4737 O ASP 629 32.319 35.565 25.647 1.00 8.80 ATOM 4738 N GLY 630 30.143 35.024 25.458 1.00 8.10 ATOM 4739 CA GLY 630 30.506 33.858 24.693 1.00 8.10 ATOM 4740 C GLY 630 29.263 33.051 24.403 1.00 8.10 ATOM 4741 O GLY 630 28.137 33.550 24.514 1.00 8.10 ATOM 4742 N THR 631 29.468 31.766 24.006 1.00 7.40 ATOM 4743 CA THR 631 28.394 30.877 23.644 1.00 7.40 ATOM 4744 CB THR 631 28.536 30.382 22.234 1.00 7.40 ATOM 4745 OG1 THR 631 28.583 31.485 21.339 1.00 7.40 ATOM 4746 CG2 THR 631 27.337 29.479 21.896 1.00 7.40 ATOM 4747 C THR 631 28.365 29.674 24.560 1.00 7.40 ATOM 4748 O THR 631 29.335 28.920 24.646 1.00 7.40 ATOM 4749 N PHE 632 27.224 29.462 25.267 1.00 7.00 ATOM 4750 CA PHE 632 27.068 28.322 26.139 1.00 7.00 ATOM 4751 CB PHE 632 26.329 28.623 27.459 1.00 7.00 ATOM 4752 CG PHE 632 27.205 29.451 28.338 1.00 7.00 ATOM 4753 CD1 PHE 632 27.302 30.812 28.154 1.00 7.00 ATOM 4754 CD2 PHE 632 27.923 28.869 29.359 1.00 7.00 ATOM 4755 CE1 PHE 632 28.106 31.576 28.967 1.00 7.00 ATOM 4756 CE2 PHE 632 28.729 29.629 30.175 1.00 7.00 ATOM 4757 CZ PHE 632 28.823 30.984 29.979 1.00 7.00 ATOM 4758 C PHE 632 26.227 27.338 25.411 1.00 7.00 ATOM 4759 O PHE 632 25.009 27.518 25.373 1.00 7.00 ATOM 4760 N SER 633 26.878 26.288 24.839 1.00 7.00 ATOM 4761 CA SER 633 26.229 25.253 24.073 1.00 7.00 ATOM 4762 CB SER 633 27.062 24.718 22.897 1.00 7.00 ATOM 4763 OG SER 633 28.249 24.109 23.374 1.00 7.00 ATOM 4764 C SER 633 25.856 24.102 24.970 1.00 7.00 ATOM 4765 O SER 633 26.393 23.939 26.069 1.00 7.00 ATOM 4766 N THR 634 24.892 23.277 24.491 1.00 7.70 ATOM 4767 CA THR 634 24.425 22.127 25.212 1.00 7.70 ATOM 4768 CB THR 634 22.943 22.125 25.450 1.00 7.70 ATOM 4769 OG1 THR 634 22.563 23.280 26.185 1.00 7.70 ATOM 4770 CG2 THR 634 22.575 20.855 26.239 1.00 7.70 ATOM 4771 C THR 634 24.759 20.902 24.426 1.00 7.70 ATOM 4772 O THR 634 24.392 20.786 23.252 1.00 7.70 ATOM 4773 N THR 635 25.482 19.978 25.109 1.00 7.30 ATOM 4774 CA THR 635 25.898 18.692 24.616 1.00 7.30 ATOM 4775 CB THR 635 27.386 18.606 24.386 1.00 7.30 ATOM 4776 OG1 THR 635 27.743 17.323 23.900 1.00 7.30 ATOM 4777 CG2 THR 635 28.137 18.937 25.683 1.00 7.30 ATOM 4778 C THR 635 25.461 17.694 25.673 1.00 7.30 ATOM 4779 O THR 635 25.007 18.046 26.770 1.00 7.30 ATOM 4780 N LEU 636 25.512 16.393 25.349 1.00 8.00 ATOM 4781 CA LEU 636 25.094 15.443 26.334 1.00 8.00 ATOM 4782 CB LEU 636 23.836 14.649 25.930 1.00 8.00 ATOM 4783 CG LEU 636 23.380 13.626 26.990 1.00 8.00 ATOM 4784 CD1 LEU 636 23.006 14.318 28.310 1.00 8.00 ATOM 4785 CD2 LEU 636 22.247 12.735 26.453 1.00 8.00 ATOM 4786 C LEU 636 26.214 14.473 26.507 1.00 8.00 ATOM 4787 O LEU 636 26.902 14.135 25.542 1.00 8.00 ATOM 4788 N VAL 637 26.440 14.037 27.765 1.00 8.80 ATOM 4789 CA VAL 637 27.449 13.064 28.065 1.00 8.80 ATOM 4790 CB VAL 637 28.323 13.484 29.216 1.00 8.80 ATOM 4791 CG1 VAL 637 27.531 13.374 30.528 1.00 8.80 ATOM 4792 CG2 VAL 637 29.626 12.679 29.172 1.00 8.80 ATOM 4793 C VAL 637 26.686 11.824 28.431 1.00 8.80 ATOM 4794 O VAL 637 25.689 11.882 29.153 1.00 8.80 ATOM 4795 N ASN 638 27.105 10.653 27.911 1.00 9.30 ATOM 4796 CA ASN 638 26.338 9.490 28.249 1.00 9.30 ATOM 4797 CB ASN 638 26.469 8.344 27.229 1.00 9.30 ATOM 4798 CG ASN 638 25.435 7.281 27.579 1.00 9.30 ATOM 4799 OD1 ASN 638 25.291 6.892 28.737 1.00 9.30 ATOM 4800 ND2 ASN 638 24.686 6.803 26.550 1.00 9.30 ATOM 4801 C ASN 638 26.857 8.991 29.558 1.00 9.30 ATOM 4802 O ASN 638 27.697 8.096 29.608 1.00 9.30 ATOM 4803 N ALA 639 26.388 9.626 30.649 1.00 9.80 ATOM 4804 CA ALA 639 26.679 9.252 32.005 1.00 9.80 ATOM 4805 CB ALA 639 26.215 10.303 33.028 1.00 9.80 ATOM 4806 C ALA 639 25.967 7.972 32.306 1.00 9.80 ATOM 4807 O ALA 639 26.437 7.165 33.103 1.00 9.80 ATOM 4808 N GLY 640 24.790 7.769 31.680 1.00 9.90 ATOM 4809 CA GLY 640 23.928 6.652 31.947 1.00 9.90 ATOM 4810 C GLY 640 22.719 7.281 32.576 1.00 9.90 ATOM 4811 O GLY 640 21.611 6.750 32.500 1.00 9.90 ATOM 4812 N THR 641 22.942 8.434 33.246 1.00 9.10 ATOM 4813 CA THR 641 21.928 9.217 33.898 1.00 9.10 ATOM 4814 CB THR 641 22.482 10.111 34.972 1.00 9.10 ATOM 4815 OG1 THR 641 23.383 11.057 34.416 1.00 9.10 ATOM 4816 CG2 THR 641 23.210 9.234 36.006 1.00 9.10 ATOM 4817 C THR 641 21.159 10.070 32.919 1.00 9.10 ATOM 4818 O THR 641 19.982 10.354 33.143 1.00 9.10 ATOM 4819 N GLY 642 21.788 10.511 31.804 1.00 8.30 ATOM 4820 CA GLY 642 21.106 11.425 30.928 1.00 8.30 ATOM 4821 C GLY 642 21.543 12.800 31.339 1.00 8.30 ATOM 4822 O GLY 642 20.876 13.793 31.038 1.00 8.30 ATOM 4823 N GLU 643 22.690 12.865 32.060 1.00 6.90 ATOM 4824 CA GLU 643 23.230 14.106 32.538 1.00 6.90 ATOM 4825 CB GLU 643 24.283 14.012 33.655 1.00 6.90 ATOM 4826 CG GLU 643 23.672 13.903 35.049 1.00 6.90 ATOM 4827 CD GLU 643 24.759 14.237 36.060 1.00 6.90 ATOM 4828 OE1 GLU 643 25.747 13.460 36.150 1.00 6.90 ATOM 4829 OE2 GLU 643 24.617 15.281 36.752 1.00 6.90 ATOM 4830 C GLU 643 23.845 14.859 31.412 1.00 6.90 ATOM 4831 O GLU 643 24.712 14.340 30.707 1.00 6.90 ATOM 4832 N THR 644 23.378 16.121 31.256 1.00 6.20 ATOM 4833 CA THR 644 23.797 17.061 30.256 1.00 6.20 ATOM 4834 CB THR 644 22.804 18.160 30.006 1.00 6.20 ATOM 4835 OG1 THR 644 22.617 18.930 31.186 1.00 6.20 ATOM 4836 CG2 THR 644 21.471 17.537 29.560 1.00 6.20 ATOM 4837 C THR 644 25.060 17.711 30.735 1.00 6.20 ATOM 4838 O THR 644 25.303 17.840 31.939 1.00 6.20 ATOM 4839 N GLN 645 25.906 18.097 29.755 1.00 5.60 ATOM 4840 CA GLN 645 27.128 18.815 29.973 1.00 5.60 ATOM 4841 CB GLN 645 28.387 17.984 29.667 1.00 5.60 ATOM 4842 CG GLN 645 29.695 18.736 29.911 1.00 5.60 ATOM 4843 CD GLN 645 30.842 17.754 29.725 1.00 5.60 ATOM 4844 OE1 GLN 645 30.842 16.665 30.298 1.00 5.60 ATOM 4845 NE2 GLN 645 31.848 18.146 28.899 1.00 5.60 ATOM 4846 C GLN 645 27.057 19.954 28.993 1.00 5.60 ATOM 4847 O GLN 645 26.670 19.762 27.837 1.00 5.60 ATOM 4848 N LEU 646 27.389 21.173 29.471 1.00 5.40 ATOM 4849 CA LEU 646 27.403 22.387 28.699 1.00 5.40 ATOM 4850 CB LEU 646 26.870 23.616 29.465 1.00 5.40 ATOM 4851 CG LEU 646 25.335 23.745 29.549 1.00 5.40 ATOM 4852 CD1 LEU 646 24.755 24.299 28.243 1.00 5.40 ATOM 4853 CD2 LEU 646 24.658 22.426 29.929 1.00 5.40 ATOM 4854 C LEU 646 28.834 22.684 28.365 1.00 5.40 ATOM 4855 O LEU 646 29.733 22.429 29.169 1.00 5.40 ATOM 4856 N VAL 647 29.079 23.183 27.131 1.00 4.90 ATOM 4857 CA VAL 647 30.391 23.627 26.753 1.00 4.90 ATOM 4858 CB VAL 647 31.081 22.811 25.695 1.00 4.90 ATOM 4859 CG1 VAL 647 31.682 21.571 26.363 1.00 4.90 ATOM 4860 CG2 VAL 647 30.053 22.417 24.629 1.00 4.90 ATOM 4861 C VAL 647 30.285 25.053 26.326 1.00 4.90 ATOM 4862 O VAL 647 29.445 25.390 25.491 1.00 4.90 ATOM 4863 N PHE 648 31.150 25.911 26.922 1.00 4.80 ATOM 4864 CA PHE 648 31.173 27.333 26.715 1.00 4.80 ATOM 4865 CB PHE 648 31.194 28.101 28.056 1.00 4.80 ATOM 4866 CG PHE 648 31.288 29.574 27.834 1.00 4.80 ATOM 4867 CD1 PHE 648 30.259 30.272 27.243 1.00 4.80 ATOM 4868 CD2 PHE 648 32.397 30.269 28.263 1.00 4.80 ATOM 4869 CE1 PHE 648 30.351 31.631 27.054 1.00 4.80 ATOM 4870 CE2 PHE 648 32.493 31.629 28.081 1.00 4.80 ATOM 4871 CZ PHE 648 31.470 32.312 27.472 1.00 4.80 ATOM 4872 C PHE 648 32.404 27.671 25.934 1.00 4.80 ATOM 4873 O PHE 648 33.509 27.266 26.301 1.00 4.80 ATOM 4874 N THR 649 32.220 28.415 24.814 1.00 5.60 ATOM 4875 CA THR 649 33.314 28.837 23.985 1.00 5.60 ATOM 4876 CB THR 649 33.180 28.405 22.553 1.00 5.60 ATOM 4877 OG1 THR 649 33.077 26.989 22.480 1.00 5.60 ATOM 4878 CG2 THR 649 34.421 28.878 21.775 1.00 5.60 ATOM 4879 C THR 649 33.372 30.341 24.028 1.00 5.60 ATOM 4880 O THR 649 32.343 31.006 23.877 1.00 5.60 ATOM 4881 N ARG 650 34.590 30.906 24.248 1.00 6.30 ATOM 4882 CA ARG 650 34.758 32.337 24.359 1.00 6.30 ATOM 4883 CB ARG 650 36.070 32.760 25.046 1.00 6.30 ATOM 4884 CG ARG 650 36.090 32.472 26.547 1.00 6.30 ATOM 4885 CD ARG 650 35.159 33.378 27.357 1.00 6.30 ATOM 4886 NE ARG 650 35.784 34.730 27.472 1.00 6.30 ATOM 4887 CZ ARG 650 35.609 35.676 26.505 1.00 6.30 ATOM 4888 NH1 ARG 650 34.948 35.376 25.351 1.00 6.30 ATOM 4889 NH2 ARG 650 36.098 36.937 26.693 1.00 6.30 ATOM 4890 C ARG 650 34.774 32.940 22.994 1.00 6.30 ATOM 4891 O ARG 650 35.624 32.579 22.180 1.00 6.30 ATOM 4892 N ASP 651 33.774 33.805 22.692 1.00 7.00 ATOM 4893 CA ASP 651 33.740 34.539 21.457 1.00 7.00 ATOM 4894 CB ASP 651 32.320 34.804 20.910 1.00 7.00 ATOM 4895 CG ASP 651 31.409 35.323 22.001 1.00 7.00 ATOM 4896 OD1 ASP 651 31.915 35.602 23.117 1.00 7.00 ATOM 4897 OD2 ASP 651 30.183 35.426 21.740 1.00 7.00 ATOM 4898 C ASP 651 34.644 35.744 21.455 1.00 7.00 ATOM 4899 O ASP 651 35.392 35.933 20.498 1.00 7.00 ATOM 4900 N SER 652 34.661 36.583 22.518 1.00 7.50 ATOM 4901 CA SER 652 35.590 37.677 22.419 1.00 7.50 ATOM 4902 CB SER 652 35.177 38.899 23.255 1.00 7.50 ATOM 4903 OG SER 652 36.137 39.933 23.118 1.00 7.50 ATOM 4904 C SER 652 36.799 37.079 23.031 1.00 7.50 ATOM 4905 O SER 652 37.049 37.236 24.226 1.00 7.50 ATOM 4906 N ALA 653 37.580 36.371 22.193 1.00 7.80 ATOM 4907 CA ALA 653 38.706 35.648 22.683 1.00 7.80 ATOM 4908 CB ALA 653 39.391 34.772 21.617 1.00 7.80 ATOM 4909 C ALA 653 39.709 36.631 23.179 1.00 7.80 ATOM 4910 O ALA 653 39.781 37.764 22.696 1.00 7.80 ATOM 4911 N GLY 654 40.513 36.194 24.169 1.00 8.20 ATOM 4912 CA GLY 654 41.531 37.033 24.723 1.00 8.20 ATOM 4913 C GLY 654 41.203 37.390 26.143 1.00 8.20 ATOM 4914 O GLY 654 42.101 37.769 26.891 1.00 8.20 ATOM 4915 N SER 655 39.936 37.287 26.591 1.00 7.90 ATOM 4916 CA SER 655 39.749 37.680 27.964 1.00 7.90 ATOM 4917 CB SER 655 38.753 38.841 28.131 1.00 7.90 ATOM 4918 OG SER 655 39.247 40.001 27.478 1.00 7.90 ATOM 4919 C SER 655 39.223 36.520 28.754 1.00 7.90 ATOM 4920 O SER 655 38.170 35.964 28.435 1.00 7.90 ATOM 4921 N ALA 656 39.956 36.143 29.829 1.00 7.70 ATOM 4922 CA ALA 656 39.553 35.067 30.692 1.00 7.70 ATOM 4923 CB ALA 656 40.661 34.596 31.649 1.00 7.70 ATOM 4924 C ALA 656 38.419 35.586 31.519 1.00 7.70 ATOM 4925 O ALA 656 38.355 36.781 31.797 1.00 7.70 ATOM 4926 N VAL 657 37.478 34.699 31.917 1.00 7.20 ATOM 4927 CA VAL 657 36.358 35.156 32.690 1.00 7.20 ATOM 4928 CB VAL 657 35.053 35.018 31.956 1.00 7.20 ATOM 4929 CG1 VAL 657 33.913 35.511 32.862 1.00 7.20 ATOM 4930 CG2 VAL 657 35.164 35.773 30.621 1.00 7.20 ATOM 4931 C VAL 657 36.279 34.311 33.921 1.00 7.20 ATOM 4932 O VAL 657 36.335 33.084 33.831 1.00 7.20 ATOM 4933 N SER 658 36.145 34.962 35.101 1.00 7.00 ATOM 4934 CA SER 658 36.029 34.265 36.350 1.00 7.00 ATOM 4935 CB SER 658 36.784 34.943 37.508 1.00 7.00 ATOM 4936 OG SER 658 38.181 34.926 37.255 1.00 7.00 ATOM 4937 C SER 658 34.568 34.280 36.683 1.00 7.00 ATOM 4938 O SER 658 33.960 35.348 36.773 1.00 7.00 ATOM 4939 N VAL 659 33.973 33.078 36.859 1.00 6.40 ATOM 4940 CA VAL 659 32.576 32.941 37.158 1.00 6.40 ATOM 4941 CB VAL 659 31.862 32.004 36.221 1.00 6.40 ATOM 4942 CG1 VAL 659 30.395 31.868 36.669 1.00 6.40 ATOM 4943 CG2 VAL 659 32.027 32.528 34.783 1.00 6.40 ATOM 4944 C VAL 659 32.490 32.373 38.537 1.00 6.40 ATOM 4945 O VAL 659 33.249 31.474 38.901 1.00 6.40 ATOM 4946 N SER 660 31.537 32.885 39.339 1.00 6.50 ATOM 4947 CA SER 660 31.398 32.461 40.699 1.00 6.50 ATOM 4948 CB SER 660 30.249 33.149 41.451 1.00 6.50 ATOM 4949 OG SER 660 30.378 34.557 41.391 1.00 6.50 ATOM 4950 C SER 660 30.980 31.041 40.653 1.00 6.50 ATOM 4951 O SER 660 30.858 30.428 39.589 1.00 6.50 ATOM 4952 N THR 661 30.693 30.504 41.858 1.00 6.00 ATOM 4953 CA THR 661 30.108 29.205 41.990 1.00 6.00 ATOM 4954 CB THR 661 29.914 28.774 43.415 1.00 6.00 ATOM 4955 OG1 THR 661 29.024 29.659 44.080 1.00 6.00 ATOM 4956 CG2 THR 661 31.281 28.770 44.120 1.00 6.00 ATOM 4957 C THR 661 28.753 29.395 41.370 1.00 6.00 ATOM 4958 O THR 661 28.389 30.537 41.091 1.00 6.00 ATOM 4959 N THR 662 27.961 28.305 41.222 1.00 5.40 ATOM 4960 CA THR 662 26.760 28.202 40.418 1.00 5.40 ATOM 4961 CB THR 662 25.696 27.290 40.970 1.00 5.40 ATOM 4962 OG1 THR 662 24.747 27.001 39.955 1.00 5.40 ATOM 4963 CG2 THR 662 24.986 27.952 42.161 1.00 5.40 ATOM 4964 C THR 662 26.161 29.539 40.061 1.00 5.40 ATOM 4965 O THR 662 25.686 30.287 40.918 1.00 5.40 ATOM 4966 N ALA 663 26.276 29.889 38.754 1.00 5.50 ATOM 4967 CA ALA 663 25.870 31.167 38.225 1.00 5.50 ATOM 4968 CB ALA 663 26.992 31.891 37.457 1.00 5.50 ATOM 4969 C ALA 663 24.727 30.981 37.262 1.00 5.50 ATOM 4970 O ALA 663 24.597 29.934 36.630 1.00 5.50 ATOM 4971 N THR 664 23.844 32.005 37.147 1.00 5.30 ATOM 4972 CA THR 664 22.730 31.921 36.244 1.00 5.30 ATOM 4973 CB THR 664 21.563 32.808 36.567 1.00 5.30 ATOM 4974 OG1 THR 664 21.999 34.143 36.759 1.00 5.30 ATOM 4975 CG2 THR 664 20.822 32.276 37.794 1.00 5.30 ATOM 4976 C THR 664 23.161 32.276 34.855 1.00 5.30 ATOM 4977 O THR 664 23.916 33.226 34.633 1.00 5.30 ATOM 4978 N PHE 665 22.657 31.487 33.881 1.00 4.90 ATOM 4979 CA PHE 665 22.901 31.689 32.482 1.00 4.90 ATOM 4980 CB PHE 665 23.308 30.374 31.781 1.00 4.90 ATOM 4981 CG PHE 665 23.392 30.559 30.305 1.00 4.90 ATOM 4982 CD1 PHE 665 24.370 31.345 29.742 1.00 4.90 ATOM 4983 CD2 PHE 665 22.506 29.903 29.480 1.00 4.90 ATOM 4984 CE1 PHE 665 24.442 31.499 28.377 1.00 4.90 ATOM 4985 CE2 PHE 665 22.575 30.051 28.115 1.00 4.90 ATOM 4986 CZ PHE 665 23.542 30.854 27.562 1.00 4.90 ATOM 4987 C PHE 665 21.604 32.185 31.901 1.00 4.90 ATOM 4988 O PHE 665 20.553 31.580 32.109 1.00 4.90 ATOM 4989 N ALA 666 21.650 33.328 31.177 1.00 5.30 ATOM 4990 CA ALA 666 20.467 33.880 30.564 1.00 5.30 ATOM 4991 CB ALA 666 20.224 35.360 30.910 1.00 5.30 ATOM 4992 C ALA 666 20.671 33.795 29.077 1.00 5.30 ATOM 4993 O ALA 666 21.781 34.026 28.590 1.00 5.30 ATOM 4994 N MET 667 19.595 33.443 28.326 1.00 4.90 ATOM 4995 CA MET 667 19.670 33.237 26.906 1.00 4.90 ATOM 4996 CB MET 667 18.730 32.116 26.428 1.00 4.90 ATOM 4997 CG MET 667 19.051 30.768 27.083 1.00 4.90 ATOM 4998 SD MET 667 17.913 29.413 26.670 1.00 4.90 ATOM 4999 CE MET 667 18.640 29.077 25.043 1.00 4.90 ATOM 5000 C MET 667 19.307 34.491 26.180 1.00 4.90 ATOM 5001 O MET 667 18.406 35.214 26.610 1.00 4.90 ATOM 5002 N ARG 668 20.021 34.755 25.056 1.00 5.20 ATOM 5003 CA ARG 668 19.777 35.869 24.177 1.00 5.20 ATOM 5004 CB ARG 668 21.063 36.434 23.554 1.00 5.20 ATOM 5005 CG ARG 668 20.883 37.790 22.875 1.00 5.20 ATOM 5006 CD ARG 668 20.722 38.955 23.850 1.00 5.20 ATOM 5007 NE ARG 668 19.380 38.841 24.486 1.00 5.20 ATOM 5008 CZ ARG 668 18.312 39.497 23.944 1.00 5.20 ATOM 5009 NH1 ARG 668 18.471 40.239 22.810 1.00 5.20 ATOM 5010 NH2 ARG 668 17.088 39.423 24.543 1.00 5.20 ATOM 5011 C ARG 668 18.934 35.304 23.072 1.00 5.20 ATOM 5012 O ARG 668 19.372 34.416 22.342 1.00 5.20 TER 6306 GLY A 832 END