####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 563), selected 80 , name T1052TS220_1-D3 # Molecule2: number of CA atoms 80 ( 563), selected 80 , name T1052-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS220_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 3.57 3.57 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 629 - 654 1.87 6.13 LONGEST_CONTINUOUS_SEGMENT: 26 643 - 668 1.81 3.85 LCS_AVERAGE: 26.23 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 594 - 607 0.96 3.84 LONGEST_CONTINUOUS_SEGMENT: 14 595 - 608 0.96 4.00 LCS_AVERAGE: 10.17 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 589 T 589 10 22 80 10 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT R 590 R 590 10 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT Q 591 Q 591 10 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT Y 592 Y 592 10 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT A 593 A 593 10 22 80 10 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT P 594 P 594 14 22 80 10 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT V 595 V 595 14 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 596 G 596 14 22 80 7 20 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 597 G 597 14 22 80 6 18 30 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT S 598 S 598 14 22 80 6 18 31 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT I 599 I 599 14 22 80 6 18 29 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT P 600 P 600 14 22 80 6 18 30 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT A 601 A 601 14 22 80 6 18 30 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT S 602 S 602 14 22 80 6 18 30 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 603 G 603 14 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT S 604 S 604 14 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT V 605 V 605 14 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT A 606 A 606 14 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT L 607 L 607 14 22 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 608 T 608 14 22 80 10 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT P 609 P 609 9 22 80 5 9 24 39 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 610 T 610 4 22 80 3 4 5 7 13 33 44 56 65 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT E 611 E 611 4 5 80 3 4 5 7 13 33 48 57 65 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT V 612 V 612 3 8 80 3 3 8 20 30 44 51 60 65 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 613 G 613 3 8 80 3 3 7 19 29 36 52 63 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT I 614 I 614 4 8 80 4 14 31 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT F 615 F 615 5 8 80 3 11 31 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT W 616 W 616 5 8 80 3 4 18 40 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT N 617 N 617 5 8 80 3 4 5 27 44 57 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 618 G 618 5 9 80 3 5 6 8 11 26 31 41 62 68 72 77 79 80 80 80 80 80 80 80 LCS_GDT A 619 A 619 5 9 80 3 5 6 7 13 26 48 53 64 68 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 620 T 620 4 9 80 3 5 6 8 11 24 37 48 58 65 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 621 G 621 4 9 80 3 5 6 7 11 16 34 41 47 59 67 74 79 80 80 80 80 80 80 80 LCS_GDT K 622 K 622 4 9 80 3 4 4 6 9 16 21 36 48 61 68 74 79 80 80 80 80 80 80 80 LCS_GDT C 623 C 623 4 9 80 3 5 6 8 11 16 33 41 49 61 69 77 79 80 80 80 80 80 80 80 LCS_GDT I 624 I 624 4 9 80 3 4 6 7 9 11 21 32 47 59 68 77 79 80 80 80 80 80 80 80 LCS_GDT F 625 F 625 4 9 80 3 4 4 6 9 13 21 32 45 59 70 77 79 80 80 80 80 80 80 80 LCS_GDT G 626 G 626 4 9 80 3 4 6 7 9 11 19 32 45 59 70 77 79 80 80 80 80 80 80 80 LCS_GDT G 627 G 627 4 9 80 3 3 9 28 39 44 57 63 66 68 72 77 79 80 80 80 80 80 80 80 LCS_GDT I 628 I 628 4 12 80 3 8 10 36 54 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT D 629 D 629 7 26 80 8 24 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 630 G 630 7 26 80 10 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 631 T 631 7 26 80 9 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT F 632 F 632 7 26 80 4 15 31 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT S 633 S 633 7 26 80 4 15 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 634 T 634 7 26 80 3 14 31 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 635 T 635 7 26 80 3 9 23 41 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT L 636 L 636 5 26 80 3 4 6 17 54 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT V 637 V 637 5 26 80 3 9 15 25 47 58 63 65 66 69 71 77 79 80 80 80 80 80 80 80 LCS_GDT N 638 N 638 5 26 80 3 13 29 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT A 639 A 639 5 26 80 3 6 19 35 43 53 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 640 G 640 5 26 80 3 8 26 38 50 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 641 T 641 5 26 80 3 8 23 39 50 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 642 G 642 5 26 80 3 4 6 23 31 39 55 63 65 68 72 77 79 80 80 80 80 80 80 80 LCS_GDT E 643 E 643 6 26 80 3 9 22 34 45 55 62 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 644 T 644 8 26 80 5 14 30 46 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT Q 645 Q 645 10 26 80 9 24 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT L 646 L 646 10 26 80 8 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT V 647 V 647 10 26 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT F 648 F 648 10 26 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 649 T 649 10 26 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT R 650 R 650 10 26 80 9 20 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT D 651 D 651 10 26 80 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT S 652 S 652 10 26 80 3 19 32 48 55 60 63 65 66 69 71 76 79 80 80 80 80 80 80 80 LCS_GDT A 653 A 653 10 26 80 6 18 30 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT G 654 G 654 10 26 80 9 15 24 39 52 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT S 655 S 655 8 26 80 6 15 28 46 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT A 656 A 656 8 26 80 5 18 30 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT V 657 V 657 8 26 80 5 18 30 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT S 658 S 658 8 26 80 6 18 30 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT V 659 V 659 8 26 80 5 16 28 46 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT S 660 S 660 8 26 80 3 9 26 34 52 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 661 T 661 8 26 80 3 8 27 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 662 T 662 7 26 80 10 25 32 48 55 59 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT A 663 A 663 7 26 80 10 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT T 664 T 664 7 26 80 7 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT F 665 F 665 7 26 80 7 23 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT A 666 A 666 7 26 80 7 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT M 667 M 667 7 26 80 6 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_GDT R 668 R 668 7 26 80 4 19 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 LCS_AVERAGE LCS_A: 45.47 ( 10.17 26.23 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 25 32 48 55 60 63 65 66 69 72 77 79 80 80 80 80 80 80 80 GDT PERCENT_AT 16.25 31.25 40.00 60.00 68.75 75.00 78.75 81.25 82.50 86.25 90.00 96.25 98.75 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.32 0.70 0.86 1.41 1.59 1.80 1.94 2.03 2.12 2.44 2.82 3.35 3.47 3.57 3.57 3.57 3.57 3.57 3.57 3.57 GDT RMS_ALL_AT 4.35 4.62 4.50 4.05 3.94 3.83 3.81 3.82 3.82 3.83 3.65 3.58 3.57 3.57 3.57 3.57 3.57 3.57 3.57 3.57 # Checking swapping # possible swapping detected: F 632 F 632 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA T 589 T 589 1.740 0 0.085 0.148 2.728 41.364 40.260 2.728 LGA R 590 R 590 2.186 0 0.096 1.083 8.554 41.364 22.810 7.668 LGA Q 591 Q 591 2.177 0 0.111 1.242 6.165 44.545 28.889 6.165 LGA Y 592 Y 592 1.423 0 0.092 0.147 2.072 54.545 58.485 2.072 LGA A 593 A 593 1.945 0 0.078 0.100 2.311 54.545 51.273 - LGA P 594 P 594 1.272 0 0.046 0.054 1.878 70.000 61.818 1.842 LGA V 595 V 595 0.606 0 0.115 0.189 0.932 81.818 81.818 0.932 LGA G 596 G 596 1.230 0 0.059 0.059 1.473 65.455 65.455 - LGA G 597 G 597 1.437 0 0.024 0.024 1.437 65.455 65.455 - LGA S 598 S 598 0.727 0 0.061 0.736 2.770 73.636 67.273 2.770 LGA I 599 I 599 1.771 0 0.088 0.491 2.905 58.182 46.818 2.905 LGA P 600 P 600 1.466 0 0.105 0.153 2.416 58.182 51.429 2.189 LGA A 601 A 601 0.893 0 0.070 0.079 1.297 77.727 75.273 - LGA S 602 S 602 1.260 0 0.711 0.638 3.192 53.636 57.576 1.138 LGA G 603 G 603 1.821 0 0.058 0.058 1.821 62.273 62.273 - LGA S 604 S 604 1.177 0 0.054 0.719 2.836 65.455 59.091 2.836 LGA V 605 V 605 0.668 0 0.045 0.996 2.533 81.818 70.390 2.533 LGA A 606 A 606 0.884 0 0.103 0.096 0.906 81.818 81.818 - LGA L 607 L 607 0.885 0 0.054 1.001 3.454 73.636 63.636 3.454 LGA T 608 T 608 1.940 0 0.098 1.086 4.230 51.364 38.182 4.230 LGA P 609 P 609 2.495 0 0.074 0.091 4.909 32.727 21.299 4.378 LGA T 610 T 610 6.453 0 0.654 0.601 10.096 0.455 0.260 10.096 LGA E 611 E 611 6.871 0 0.126 0.781 8.402 0.000 0.000 7.302 LGA V 612 V 612 6.485 0 0.093 0.216 9.887 0.000 0.000 7.703 LGA G 613 G 613 5.350 0 0.349 0.349 5.350 7.273 7.273 - LGA I 614 I 614 0.904 0 0.542 0.963 3.555 60.455 40.682 3.086 LGA F 615 F 615 1.332 0 0.219 1.144 7.865 55.000 28.926 7.225 LGA W 616 W 616 2.192 0 0.111 1.150 5.798 35.909 23.636 5.798 LGA N 617 N 617 3.981 0 0.610 0.818 9.299 11.364 5.682 7.051 LGA G 618 G 618 7.230 0 0.087 0.087 7.654 0.000 0.000 - LGA A 619 A 619 6.111 0 0.594 0.559 6.192 0.000 0.000 - LGA T 620 T 620 7.778 0 0.080 1.078 9.156 0.000 0.000 9.156 LGA G 621 G 621 10.087 0 0.753 0.753 10.087 0.000 0.000 - LGA K 622 K 622 9.831 0 0.072 1.098 11.881 0.000 0.000 9.489 LGA C 623 C 623 8.784 0 0.187 0.660 9.324 0.000 0.000 9.044 LGA I 624 I 624 9.299 0 0.058 0.126 13.585 0.000 0.000 13.585 LGA F 625 F 625 8.826 0 0.037 1.158 15.925 0.000 0.000 15.925 LGA G 626 G 626 9.007 0 0.562 0.562 9.007 0.000 0.000 - LGA G 627 G 627 5.218 0 0.226 0.226 6.141 5.455 5.455 - LGA I 628 I 628 2.708 0 0.092 0.695 6.717 44.091 26.818 6.717 LGA D 629 D 629 1.819 0 0.266 1.131 4.805 50.909 32.500 3.341 LGA G 630 G 630 1.659 0 0.098 0.098 2.065 47.727 47.727 - LGA T 631 T 631 1.590 0 0.131 1.013 2.571 58.182 51.688 1.623 LGA F 632 F 632 1.808 0 0.156 1.198 9.033 47.727 22.645 9.033 LGA S 633 S 633 1.398 0 0.172 0.572 2.400 73.636 66.364 2.400 LGA T 634 T 634 1.358 0 0.134 0.168 2.046 51.364 55.325 1.879 LGA T 635 T 635 2.652 0 0.607 1.125 4.881 27.727 28.052 4.881 LGA L 636 L 636 3.032 0 0.024 1.047 8.231 20.909 10.682 8.231 LGA V 637 V 637 3.591 0 0.620 0.633 6.566 14.091 8.052 6.566 LGA N 638 N 638 1.762 0 0.065 0.127 3.498 47.727 42.045 1.816 LGA A 639 A 639 4.009 0 0.050 0.046 5.072 11.364 9.091 - LGA G 640 G 640 2.981 0 0.441 0.441 4.306 17.273 17.273 - LGA T 641 T 641 3.362 0 0.274 1.005 6.112 11.818 13.766 3.851 LGA G 642 G 642 6.428 0 0.702 0.702 6.428 0.455 0.455 - LGA E 643 E 643 4.429 0 0.061 0.160 6.554 12.727 6.061 6.072 LGA T 644 T 644 1.876 0 0.126 0.986 3.265 41.818 35.844 2.455 LGA Q 645 Q 645 1.418 0 0.056 0.823 4.923 65.455 42.020 2.659 LGA L 646 L 646 1.905 0 0.086 0.814 3.936 50.909 40.227 3.249 LGA V 647 V 647 1.337 0 0.049 0.073 1.686 61.818 61.299 1.374 LGA F 648 F 648 1.213 0 0.088 0.102 1.325 65.455 65.455 1.261 LGA T 649 T 649 1.188 0 0.085 0.110 1.396 65.455 65.455 1.376 LGA R 650 R 650 1.561 0 0.157 0.987 3.872 47.727 41.983 3.872 LGA D 651 D 651 1.359 0 0.062 0.197 2.373 55.000 56.591 1.750 LGA S 652 S 652 2.504 0 0.319 0.741 3.788 45.000 33.636 3.604 LGA A 653 A 653 0.488 0 0.068 0.069 1.537 82.273 76.000 - LGA G 654 G 654 2.558 0 0.624 0.624 2.558 52.273 52.273 - LGA S 655 S 655 2.166 0 0.185 0.269 3.586 44.545 34.545 3.454 LGA A 656 A 656 1.426 0 0.024 0.027 1.892 54.545 56.727 - LGA V 657 V 657 1.550 0 0.081 1.040 3.727 61.818 46.753 3.727 LGA S 658 S 658 1.762 0 0.075 0.732 2.309 50.909 48.788 2.309 LGA V 659 V 659 2.092 0 0.157 0.998 4.086 41.364 39.221 4.086 LGA S 660 S 660 3.312 0 0.574 0.736 5.396 15.909 14.545 3.009 LGA T 661 T 661 2.337 0 0.420 0.931 5.522 45.000 27.273 5.522 LGA T 662 T 662 2.650 0 0.477 1.222 3.805 23.182 25.195 3.381 LGA A 663 A 663 2.316 0 0.041 0.042 2.316 38.182 38.182 - LGA T 664 T 664 2.483 0 0.055 1.102 4.002 44.545 32.727 4.002 LGA F 665 F 665 0.719 0 0.040 1.252 7.225 73.636 40.165 7.225 LGA A 666 A 666 0.857 0 0.027 0.034 1.241 81.818 78.545 - LGA M 667 M 667 0.759 0 0.040 1.170 6.221 77.727 56.591 6.221 LGA R 668 R 668 0.978 0 0.079 0.900 6.555 81.818 48.595 6.555 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 80 320 320 100.00 563 563 100.00 80 59 SUMMARY(RMSD_GDC): 3.567 3.492 4.292 42.142 36.005 19.445 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 65 2.03 68.125 61.049 3.047 LGA_LOCAL RMSD: 2.033 Number of atoms: 65 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.821 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 3.567 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.670589 * X + -0.437397 * Y + -0.599161 * Z + 25.431564 Y_new = 0.502165 * X + -0.326841 * Y + 0.800628 * Z + -82.876442 Z_new = -0.546023 * X + -0.837770 * Y + 0.000469 * Z + 95.461533 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.642759 0.577610 -1.570236 [DEG: 36.8274 33.0946 -89.9679 ] ZXZ: -2.499140 1.570327 -2.563983 [DEG: -143.1901 89.9731 -146.9054 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1052TS220_1-D3 REMARK 2: T1052-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS220_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 65 2.03 61.049 3.57 REMARK ---------------------------------------------------------- MOLECULE T1052TS220_1-D3 PFRMAT TS TARGET T1052 MODEL 1 PARENT N/A ATOM 5199 N THR 589 16.123 30.536 32.742 1.00 12.35 ATOM 5200 CA THR 589 17.494 30.675 32.951 1.00 12.35 ATOM 5201 C THR 589 17.963 29.363 33.579 1.00 12.35 ATOM 5202 O THR 589 17.187 28.703 34.288 1.00 12.35 ATOM 5203 CB THR 589 17.735 31.833 33.937 1.00 12.35 ATOM 5204 CG2 THR 589 17.317 33.187 33.359 1.00 12.35 ATOM 5205 OG1 THR 589 17.030 31.585 35.161 1.00 12.35 ATOM 5207 N ARG 590 19.181 29.032 33.406 1.00 11.85 ATOM 5208 CA ARG 590 19.671 27.798 33.843 1.00 11.85 ATOM 5209 C ARG 590 20.894 28.038 34.630 1.00 11.85 ATOM 5210 O ARG 590 21.686 28.888 34.271 1.00 11.85 ATOM 5211 CB ARG 590 20.038 27.056 32.573 1.00 11.85 ATOM 5212 CG ARG 590 18.901 26.958 31.551 1.00 11.85 ATOM 5213 CD ARG 590 19.444 26.670 30.076 1.00 11.85 ATOM 5214 NE ARG 590 19.915 25.313 29.781 1.00 11.85 ATOM 5215 CZ ARG 590 20.685 25.012 28.707 1.00 11.85 ATOM 5216 NH1 ARG 590 21.122 25.983 27.906 1.00 11.85 ATOM 5217 NH2 ARG 590 21.024 23.783 28.497 1.00 11.85 ATOM 5220 N GLN 591 21.039 27.375 35.709 1.00 11.97 ATOM 5221 CA GLN 591 22.165 27.582 36.550 1.00 11.97 ATOM 5222 C GLN 591 23.338 26.469 36.357 1.00 11.97 ATOM 5223 O GLN 591 23.112 25.287 36.508 1.00 11.97 ATOM 5224 CB GLN 591 21.679 27.670 37.928 1.00 11.97 ATOM 5225 CG GLN 591 22.581 28.251 38.888 1.00 11.97 ATOM 5226 CD GLN 591 21.940 28.345 40.191 1.00 11.97 ATOM 5227 NE2 GLN 591 22.188 29.488 40.930 1.00 11.97 ATOM 5228 OE1 GLN 591 21.274 27.376 40.614 1.00 11.97 ATOM 5232 N TYR 592 24.553 26.924 36.100 1.00 12.93 ATOM 5233 CA TYR 592 25.697 25.988 35.817 1.00 12.93 ATOM 5234 C TYR 592 26.970 26.248 36.633 1.00 12.93 ATOM 5235 O TYR 592 27.329 27.450 36.958 1.00 12.93 ATOM 5236 CB TYR 592 26.063 26.046 34.324 1.00 12.93 ATOM 5237 CG TYR 592 25.027 25.480 33.456 1.00 12.93 ATOM 5238 CD1 TYR 592 25.035 24.154 33.215 1.00 12.93 ATOM 5239 CD2 TYR 592 24.037 26.256 32.850 1.00 12.93 ATOM 5240 CE1 TYR 592 24.036 23.550 32.473 1.00 12.93 ATOM 5241 CE2 TYR 592 23.086 25.687 32.086 1.00 12.93 ATOM 5242 CZ TYR 592 23.068 24.293 31.945 1.00 12.93 ATOM 5243 OH TYR 592 22.100 23.696 31.178 1.00 12.93 ATOM 5245 N ALA 593 27.668 25.158 36.997 1.00 13.18 ATOM 5246 CA ALA 593 28.924 25.287 37.631 1.00 13.18 ATOM 5247 C ALA 593 29.991 25.047 36.642 1.00 13.18 ATOM 5248 O ALA 593 30.084 23.915 36.062 1.00 13.18 ATOM 5249 CB ALA 593 29.041 24.301 38.818 1.00 13.18 ATOM 5251 N PRO 594 30.765 26.099 36.301 1.00 14.10 ATOM 5252 CA PRO 594 31.812 25.923 35.388 1.00 14.10 ATOM 5253 C PRO 594 32.944 25.211 36.049 1.00 14.10 ATOM 5254 O PRO 594 33.322 25.555 37.242 1.00 14.10 ATOM 5255 CB PRO 594 32.165 27.326 34.964 1.00 14.10 ATOM 5256 CG PRO 594 31.817 28.144 36.142 1.00 14.10 ATOM 5257 CD PRO 594 30.600 27.505 36.707 1.00 14.10 ATOM 5258 N VAL 595 33.594 24.343 35.376 1.00 12.69 ATOM 5259 CA VAL 595 34.607 23.628 36.049 1.00 12.69 ATOM 5260 C VAL 595 35.925 24.448 36.036 1.00 12.69 ATOM 5261 O VAL 595 36.531 24.709 34.980 1.00 12.69 ATOM 5262 CB VAL 595 34.804 22.157 35.469 1.00 12.69 ATOM 5263 CG1 VAL 595 33.519 21.329 35.652 1.00 12.69 ATOM 5264 CG2 VAL 595 35.186 22.189 34.004 1.00 12.69 ATOM 5266 N GLY 596 36.363 24.762 37.271 1.00 12.64 ATOM 5267 CA GLY 596 37.559 25.571 37.559 1.00 12.64 ATOM 5268 C GLY 596 37.280 27.053 37.809 1.00 12.64 ATOM 5269 O GLY 596 38.195 27.805 38.225 1.00 12.64 ATOM 5271 N GLY 597 36.063 27.510 37.517 1.00 12.98 ATOM 5272 CA GLY 597 35.664 28.882 37.865 1.00 12.98 ATOM 5273 C GLY 597 36.252 29.976 36.990 1.00 12.98 ATOM 5274 O GLY 597 35.965 31.135 37.163 1.00 12.98 ATOM 5276 N SER 598 37.111 29.655 36.096 1.00 13.79 ATOM 5277 CA SER 598 37.597 30.662 35.184 1.00 13.79 ATOM 5278 C SER 598 37.613 30.143 33.822 1.00 13.79 ATOM 5279 O SER 598 38.035 28.979 33.577 1.00 13.79 ATOM 5280 CB SER 598 39.024 31.179 35.581 1.00 13.79 ATOM 5281 OG SER 598 38.983 31.874 36.840 1.00 13.79 ATOM 5283 N ILE 599 37.240 30.969 32.898 1.00 12.60 ATOM 5284 CA ILE 599 37.183 30.568 31.580 1.00 12.60 ATOM 5285 C ILE 599 38.184 31.167 30.883 1.00 12.60 ATOM 5286 O ILE 599 38.188 32.446 30.866 1.00 12.60 ATOM 5287 CB ILE 599 35.789 30.951 30.883 1.00 12.60 ATOM 5288 CG1 ILE 599 34.592 30.310 31.571 1.00 12.60 ATOM 5289 CG2 ILE 599 35.791 30.632 29.418 1.00 12.60 ATOM 5290 CD1 ILE 599 34.110 31.034 32.760 1.00 12.60 ATOM 5292 N PRO 600 39.108 30.267 30.247 1.00 13.04 ATOM 5293 CA PRO 600 40.217 30.730 29.459 1.00 13.04 ATOM 5294 C PRO 600 39.705 31.575 28.292 1.00 13.04 ATOM 5295 O PRO 600 38.731 31.229 27.614 1.00 13.04 ATOM 5296 CB PRO 600 40.895 29.402 28.989 1.00 13.04 ATOM 5297 CG PRO 600 39.810 28.389 29.126 1.00 13.04 ATOM 5298 CD PRO 600 39.120 28.815 30.376 1.00 13.04 ATOM 5299 N ALA 601 40.415 32.584 28.019 1.00 13.96 ATOM 5300 CA ALA 601 40.012 33.593 27.084 1.00 13.96 ATOM 5301 C ALA 601 39.730 33.158 25.650 1.00 13.96 ATOM 5302 O ALA 601 38.744 33.625 25.043 1.00 13.96 ATOM 5303 CB ALA 601 41.095 34.609 27.077 1.00 13.96 ATOM 5305 N SER 602 40.567 32.363 25.095 1.00 13.20 ATOM 5306 CA SER 602 40.343 31.850 23.767 1.00 13.20 ATOM 5307 C SER 602 39.764 30.470 23.759 1.00 13.20 ATOM 5308 O SER 602 39.420 29.942 22.692 1.00 13.20 ATOM 5309 CB SER 602 41.637 31.875 22.981 1.00 13.20 ATOM 5310 OG SER 602 42.587 31.023 23.573 1.00 13.20 ATOM 5312 N GLY 603 39.679 29.862 24.902 1.00 12.02 ATOM 5313 CA GLY 603 39.277 28.468 24.955 1.00 12.02 ATOM 5314 C GLY 603 37.850 28.137 25.169 1.00 12.02 ATOM 5315 O GLY 603 36.930 29.029 25.116 1.00 12.02 ATOM 5317 N SER 604 37.649 26.802 25.484 1.00 11.87 ATOM 5318 CA SER 604 36.400 26.280 25.824 1.00 11.87 ATOM 5319 C SER 604 36.472 25.632 27.236 1.00 11.87 ATOM 5320 O SER 604 37.539 25.144 27.687 1.00 11.87 ATOM 5321 CB SER 604 35.991 25.188 24.774 1.00 11.87 ATOM 5322 OG SER 604 36.925 24.084 24.771 1.00 11.87 ATOM 5324 N VAL 605 35.326 25.689 27.909 1.00 11.68 ATOM 5325 CA VAL 605 35.165 25.249 29.299 1.00 11.68 ATOM 5326 C VAL 605 33.976 24.340 29.478 1.00 11.68 ATOM 5327 O VAL 605 32.944 24.580 28.892 1.00 11.68 ATOM 5328 CB VAL 605 35.052 26.408 30.212 1.00 11.68 ATOM 5329 CG1 VAL 605 34.893 25.954 31.653 1.00 11.68 ATOM 5330 CG2 VAL 605 36.271 27.259 30.051 1.00 11.68 ATOM 5332 N ALA 606 34.152 23.242 30.215 1.00 11.70 ATOM 5333 CA ALA 606 33.061 22.375 30.559 1.00 11.70 ATOM 5334 C ALA 606 32.188 22.982 31.698 1.00 11.70 ATOM 5335 O ALA 606 32.687 23.631 32.684 1.00 11.70 ATOM 5336 CB ALA 606 33.572 21.013 30.928 1.00 11.70 ATOM 5338 N LEU 607 30.966 22.833 31.560 1.00 12.67 ATOM 5339 CA LEU 607 30.064 23.269 32.527 1.00 12.67 ATOM 5340 C LEU 607 29.143 22.125 32.942 1.00 12.67 ATOM 5341 O LEU 607 28.724 21.324 32.075 1.00 12.67 ATOM 5342 CB LEU 607 29.247 24.430 31.997 1.00 12.67 ATOM 5343 CG LEU 607 29.944 25.810 31.952 1.00 12.67 ATOM 5344 CD1 LEU 607 30.861 25.917 30.767 1.00 12.67 ATOM 5345 CD2 LEU 607 28.901 26.929 31.964 1.00 12.67 ATOM 5347 N THR 608 28.852 21.999 34.265 1.00 13.36 ATOM 5348 CA THR 608 27.888 20.961 34.739 1.00 13.36 ATOM 5349 C THR 608 26.675 21.652 35.396 1.00 13.36 ATOM 5350 O THR 608 26.859 22.557 36.236 1.00 13.36 ATOM 5351 CB THR 608 28.573 20.041 35.812 1.00 13.36 ATOM 5352 CG2 THR 608 27.618 18.942 36.268 1.00 13.36 ATOM 5353 OG1 THR 608 29.734 19.428 35.246 1.00 13.36 ATOM 5355 N PRO 609 25.394 21.295 35.020 1.00 13.34 ATOM 5356 CA PRO 609 24.247 21.957 35.648 1.00 13.34 ATOM 5357 C PRO 609 24.121 21.710 37.034 1.00 13.34 ATOM 5358 O PRO 609 24.387 20.601 37.519 1.00 13.34 ATOM 5359 CB PRO 609 23.011 21.425 34.859 1.00 13.34 ATOM 5360 CG PRO 609 23.503 20.097 34.309 1.00 13.34 ATOM 5361 CD PRO 609 24.973 20.354 33.964 1.00 13.34 ATOM 5362 N THR 610 23.677 22.724 37.727 1.00 14.61 ATOM 5363 CA THR 610 23.398 22.570 39.112 1.00 14.61 ATOM 5364 C THR 610 21.932 22.491 39.273 1.00 14.61 ATOM 5365 O THR 610 21.464 21.918 40.183 1.00 14.61 ATOM 5366 CB THR 610 23.954 23.798 40.007 1.00 14.61 ATOM 5367 CG2 THR 610 25.466 23.903 39.948 1.00 14.61 ATOM 5368 OG1 THR 610 23.349 25.104 39.582 1.00 14.61 ATOM 5370 N GLU 611 21.226 22.993 38.317 1.00 15.75 ATOM 5371 CA GLU 611 19.846 23.047 38.348 1.00 15.75 ATOM 5372 C GLU 611 19.273 22.542 37.004 1.00 15.75 ATOM 5373 O GLU 611 19.721 22.959 35.897 1.00 15.75 ATOM 5374 CB GLU 611 19.342 24.497 38.707 1.00 15.75 ATOM 5375 CG GLU 611 17.822 24.642 38.840 1.00 15.75 ATOM 5376 CD GLU 611 17.397 26.032 39.344 1.00 15.75 ATOM 5377 OE1 GLU 611 18.312 26.945 39.470 1.00 15.75 ATOM 5378 OE2 GLU 611 16.180 26.225 39.649 1.00 15.75 ATOM 5380 N VAL 612 18.310 21.742 37.127 1.00 15.93 ATOM 5381 CA VAL 612 17.640 21.056 36.020 1.00 15.93 ATOM 5382 C VAL 612 18.327 21.286 34.706 1.00 15.93 ATOM 5383 O VAL 612 18.275 22.390 34.144 1.00 15.93 ATOM 5384 CB VAL 612 16.173 21.544 35.899 1.00 15.93 ATOM 5385 CG1 VAL 612 15.389 20.652 34.968 1.00 15.93 ATOM 5386 CG2 VAL 612 15.499 21.651 37.252 1.00 15.93 ATOM 5388 N GLY 613 18.994 20.210 34.219 1.00 15.78 ATOM 5389 CA GLY 613 19.639 20.190 32.907 1.00 15.78 ATOM 5390 C GLY 613 18.651 20.337 31.746 1.00 15.78 ATOM 5391 O GLY 613 18.333 19.327 31.076 1.00 15.78 ATOM 5393 N ILE 614 18.167 21.571 31.446 1.00 16.98 ATOM 5394 CA ILE 614 17.170 21.669 30.446 1.00 16.98 ATOM 5395 C ILE 614 17.738 21.871 29.123 1.00 16.98 ATOM 5396 O ILE 614 18.181 22.971 28.707 1.00 16.98 ATOM 5397 CB ILE 614 16.125 22.763 30.713 1.00 16.98 ATOM 5398 CG1 ILE 614 15.448 22.505 32.048 1.00 16.98 ATOM 5399 CG2 ILE 614 15.078 22.720 29.591 1.00 16.98 ATOM 5400 CD1 ILE 614 14.575 23.624 32.518 1.00 16.98 ATOM 5402 N PHE 615 17.661 20.824 28.514 1.00 17.47 ATOM 5403 CA PHE 615 17.941 20.534 27.210 1.00 17.47 ATOM 5404 C PHE 615 17.519 19.171 27.092 1.00 17.47 ATOM 5405 O PHE 615 17.961 18.406 27.923 1.00 17.47 ATOM 5406 CB PHE 615 19.465 20.690 26.817 1.00 17.47 ATOM 5407 CG PHE 615 19.764 20.952 25.309 1.00 17.47 ATOM 5408 CD1 PHE 615 19.741 22.220 24.808 1.00 17.47 ATOM 5409 CD2 PHE 615 20.008 19.889 24.434 1.00 17.47 ATOM 5410 CE1 PHE 615 20.087 22.461 23.490 1.00 17.47 ATOM 5411 CE2 PHE 615 20.342 20.131 23.117 1.00 17.47 ATOM 5412 CZ PHE 615 20.508 21.415 22.690 1.00 17.47 ATOM 5414 N TRP 616 16.667 18.777 26.251 1.00 17.43 ATOM 5415 CA TRP 616 16.350 17.435 26.328 1.00 17.43 ATOM 5416 C TRP 616 17.580 16.688 26.061 1.00 17.43 ATOM 5417 O TRP 616 18.272 16.895 25.006 1.00 17.43 ATOM 5418 CB TRP 616 15.130 16.998 25.524 1.00 17.43 ATOM 5419 CG TRP 616 14.806 15.579 25.749 1.00 17.43 ATOM 5420 CD1 TRP 616 14.367 15.026 26.889 1.00 17.43 ATOM 5421 CD2 TRP 616 14.800 14.576 24.798 1.00 17.43 ATOM 5422 CE2 TRP 616 14.469 13.405 25.448 1.00 17.43 ATOM 5423 CE3 TRP 616 15.177 14.519 23.486 1.00 17.43 ATOM 5424 NE1 TRP 616 14.207 13.714 26.724 1.00 17.43 ATOM 5425 CZ2 TRP 616 14.548 12.191 24.838 1.00 17.43 ATOM 5426 CZ3 TRP 616 15.178 13.310 22.855 1.00 17.43 ATOM 5427 CH2 TRP 616 14.885 12.175 23.523 1.00 17.43 ATOM 5430 N ASN 617 17.899 15.800 26.931 1.00 17.55 ATOM 5431 CA ASN 617 19.116 15.144 26.845 1.00 17.55 ATOM 5432 C ASN 617 19.237 14.373 25.553 1.00 17.55 ATOM 5433 O ASN 617 20.259 14.438 24.885 1.00 17.55 ATOM 5434 CB ASN 617 19.265 14.268 28.058 1.00 17.55 ATOM 5435 CG ASN 617 19.581 15.101 29.329 1.00 17.55 ATOM 5436 ND2 ASN 617 19.200 14.598 30.501 1.00 17.55 ATOM 5437 OD1 ASN 617 20.213 16.144 29.253 1.00 17.55 ATOM 5441 N GLY 618 18.249 13.765 25.161 1.00 17.71 ATOM 5442 CA GLY 618 18.274 13.017 23.917 1.00 17.71 ATOM 5443 C GLY 618 18.551 13.924 22.657 1.00 17.71 ATOM 5444 O GLY 618 19.072 13.467 21.659 1.00 17.71 ATOM 5446 N ALA 619 18.100 15.172 22.752 1.00 17.70 ATOM 5447 CA ALA 619 18.156 16.177 21.714 1.00 17.70 ATOM 5448 C ALA 619 19.472 16.883 21.699 1.00 17.70 ATOM 5449 O ALA 619 19.629 17.852 20.994 1.00 17.70 ATOM 5450 CB ALA 619 17.025 17.183 21.847 1.00 17.70 ATOM 5452 N THR 620 20.401 16.463 22.557 1.00 17.01 ATOM 5453 CA THR 620 21.744 17.150 22.675 1.00 17.01 ATOM 5454 C THR 620 22.449 17.422 21.303 1.00 17.01 ATOM 5455 O THR 620 22.010 16.913 20.230 1.00 17.01 ATOM 5456 CB THR 620 22.727 16.362 23.552 1.00 17.01 ATOM 5457 CG2 THR 620 23.170 15.064 22.847 1.00 17.01 ATOM 5458 OG1 THR 620 23.881 17.191 23.749 1.00 17.01 ATOM 5460 N GLY 621 23.616 18.193 21.376 1.00 15.62 ATOM 5461 CA GLY 621 24.426 18.494 20.188 1.00 15.62 ATOM 5462 C GLY 621 24.217 19.885 19.512 1.00 15.62 ATOM 5463 O GLY 621 24.810 20.141 18.427 1.00 15.62 ATOM 5465 N LYS 622 23.393 20.775 20.085 1.00 15.29 ATOM 5466 CA LYS 622 23.249 22.171 19.511 1.00 15.29 ATOM 5467 C LYS 622 23.942 23.231 20.340 1.00 15.29 ATOM 5468 O LYS 622 24.103 23.081 21.563 1.00 15.29 ATOM 5469 CB LYS 622 21.835 22.568 19.264 1.00 15.29 ATOM 5470 CG LYS 622 21.589 23.305 17.884 1.00 15.29 ATOM 5471 CD LYS 622 21.511 22.369 16.691 1.00 15.29 ATOM 5472 CE LYS 622 22.878 22.036 16.037 1.00 15.29 ATOM 5473 NZ LYS 622 23.295 23.115 15.032 1.00 15.29 ATOM 5475 N CYS 623 24.400 24.302 19.647 1.00 13.26 ATOM 5476 CA CYS 623 25.109 25.412 20.302 1.00 13.26 ATOM 5477 C CYS 623 24.162 26.554 20.421 1.00 13.26 ATOM 5478 O CYS 623 23.591 26.918 19.475 1.00 13.26 ATOM 5479 CB CYS 623 26.242 25.916 19.382 1.00 13.26 ATOM 5480 SG CYS 623 27.509 24.704 18.921 1.00 13.26 ATOM 5482 N ILE 624 24.033 27.098 21.583 1.00 13.75 ATOM 5483 CA ILE 624 23.091 28.185 21.843 1.00 13.75 ATOM 5484 C ILE 624 23.877 29.387 22.414 1.00 13.75 ATOM 5485 O ILE 624 24.721 29.203 23.232 1.00 13.75 ATOM 5486 CB ILE 624 21.980 27.742 22.805 1.00 13.75 ATOM 5487 CG1 ILE 624 21.245 26.482 22.193 1.00 13.75 ATOM 5488 CG2 ILE 624 20.942 28.927 22.933 1.00 13.75 ATOM 5489 CD1 ILE 624 20.309 25.752 23.155 1.00 13.75 ATOM 5491 N PHE 625 23.659 30.559 21.953 1.00 12.79 ATOM 5492 CA PHE 625 24.461 31.703 22.449 1.00 12.79 ATOM 5493 C PHE 625 23.842 32.278 23.711 1.00 12.79 ATOM 5494 O PHE 625 22.626 32.563 23.758 1.00 12.79 ATOM 5495 CB PHE 625 24.515 32.694 21.389 1.00 12.79 ATOM 5496 CG PHE 625 25.387 32.254 20.280 1.00 12.79 ATOM 5497 CD1 PHE 625 24.906 31.375 19.303 1.00 12.79 ATOM 5498 CD2 PHE 625 26.686 32.757 20.155 1.00 12.79 ATOM 5499 CE1 PHE 625 25.701 30.971 18.281 1.00 12.79 ATOM 5500 CE2 PHE 625 27.481 32.396 19.087 1.00 12.79 ATOM 5501 CZ PHE 625 27.018 31.479 18.168 1.00 12.79 ATOM 5503 N GLY 626 24.721 32.431 24.784 1.00 12.89 ATOM 5504 CA GLY 626 24.236 32.840 26.157 1.00 12.89 ATOM 5505 C GLY 626 24.596 34.226 26.747 1.00 12.89 ATOM 5506 O GLY 626 24.950 35.224 26.023 1.00 12.89 ATOM 5508 N GLY 627 24.453 34.298 28.121 1.00 11.62 ATOM 5509 CA GLY 627 24.773 35.533 28.890 1.00 11.62 ATOM 5510 C GLY 627 26.255 35.940 28.938 1.00 11.62 ATOM 5511 O GLY 627 26.581 37.098 28.716 1.00 11.62 ATOM 5513 N ILE 628 27.186 34.959 29.167 1.00 11.46 ATOM 5514 CA ILE 628 28.591 35.268 29.172 1.00 11.46 ATOM 5515 C ILE 628 28.955 35.295 27.761 1.00 11.46 ATOM 5516 O ILE 628 28.597 34.385 27.036 1.00 11.46 ATOM 5517 CB ILE 628 29.484 34.188 29.895 1.00 11.46 ATOM 5518 CG1 ILE 628 29.119 33.973 31.302 1.00 11.46 ATOM 5519 CG2 ILE 628 30.929 34.611 29.866 1.00 11.46 ATOM 5520 CD1 ILE 628 29.888 32.818 31.871 1.00 11.46 ATOM 5522 N ASP 629 29.641 36.389 27.336 1.00 10.12 ATOM 5523 CA ASP 629 29.979 36.649 25.915 1.00 10.12 ATOM 5524 C ASP 629 30.724 35.455 25.294 1.00 10.12 ATOM 5525 O ASP 629 32.025 35.385 25.220 1.00 10.12 ATOM 5526 CB ASP 629 30.786 37.986 25.856 1.00 10.12 ATOM 5527 CG ASP 629 31.083 38.553 24.460 1.00 10.12 ATOM 5528 OD1 ASP 629 31.428 37.779 23.527 1.00 10.12 ATOM 5529 OD2 ASP 629 30.925 39.793 24.287 1.00 10.12 ATOM 5531 N GLY 630 29.883 34.538 24.789 1.00 9.94 ATOM 5532 CA GLY 630 30.298 33.337 24.261 1.00 9.94 ATOM 5533 C GLY 630 29.114 32.375 23.947 1.00 9.94 ATOM 5534 O GLY 630 27.842 32.701 24.220 1.00 9.94 ATOM 5536 N THR 631 29.482 31.145 23.462 1.00 9.53 ATOM 5537 CA THR 631 28.497 30.171 22.995 1.00 9.53 ATOM 5538 C THR 631 28.416 29.026 23.970 1.00 9.53 ATOM 5539 O THR 631 29.472 28.439 24.352 1.00 9.53 ATOM 5540 CB THR 631 28.992 29.554 21.710 1.00 9.53 ATOM 5541 CG2 THR 631 27.943 28.618 21.137 1.00 9.53 ATOM 5542 OG1 THR 631 29.259 30.585 20.763 1.00 9.53 ATOM 5544 N PHE 632 27.217 28.673 24.392 1.00 10.01 ATOM 5545 CA PHE 632 27.028 27.535 25.261 1.00 10.01 ATOM 5546 C PHE 632 26.470 26.357 24.434 1.00 10.01 ATOM 5547 O PHE 632 25.427 26.463 23.835 1.00 10.01 ATOM 5548 CB PHE 632 26.012 27.895 26.376 1.00 10.01 ATOM 5549 CG PHE 632 26.522 28.903 27.364 1.00 10.01 ATOM 5550 CD1 PHE 632 26.308 30.270 27.157 1.00 10.01 ATOM 5551 CD2 PHE 632 27.212 28.499 28.485 1.00 10.01 ATOM 5552 CE1 PHE 632 26.757 31.202 28.072 1.00 10.01 ATOM 5553 CE2 PHE 632 27.697 29.431 29.398 1.00 10.01 ATOM 5554 CZ PHE 632 27.484 30.788 29.175 1.00 10.01 ATOM 5556 N SER 633 27.125 25.250 24.455 1.00 10.65 ATOM 5557 CA SER 633 26.700 24.124 23.635 1.00 10.65 ATOM 5558 C SER 633 26.483 22.921 24.447 1.00 10.65 ATOM 5559 O SER 633 27.266 22.637 25.332 1.00 10.65 ATOM 5560 CB SER 633 27.874 23.770 22.704 1.00 10.65 ATOM 5561 OG SER 633 28.208 24.811 21.895 1.00 10.65 ATOM 5563 N THR 634 25.479 22.105 24.147 1.00 11.29 ATOM 5564 CA THR 634 25.396 20.880 24.893 1.00 11.29 ATOM 5565 C THR 634 26.162 19.903 24.097 1.00 11.29 ATOM 5566 O THR 634 25.759 19.541 22.954 1.00 11.29 ATOM 5567 CB THR 634 23.946 20.455 25.039 1.00 11.29 ATOM 5568 CG2 THR 634 23.139 21.567 25.692 1.00 11.29 ATOM 5569 OG1 THR 634 23.429 20.213 23.743 1.00 11.29 ATOM 5571 N THR 635 27.214 19.397 24.687 1.00 12.07 ATOM 5572 CA THR 635 28.151 18.540 23.972 1.00 12.07 ATOM 5573 C THR 635 28.068 17.055 24.276 1.00 12.07 ATOM 5574 O THR 635 27.898 16.249 23.359 1.00 12.07 ATOM 5575 CB THR 635 29.617 19.053 24.183 1.00 12.07 ATOM 5576 CG2 THR 635 30.221 18.513 25.443 1.00 12.07 ATOM 5577 OG1 THR 635 30.422 18.671 23.075 1.00 12.07 ATOM 5579 N LEU 636 28.265 16.698 25.523 1.00 11.87 ATOM 5580 CA LEU 636 28.295 15.286 25.962 1.00 11.87 ATOM 5581 C LEU 636 27.227 15.034 26.935 1.00 11.87 ATOM 5582 O LEU 636 27.220 15.631 28.009 1.00 11.87 ATOM 5583 CB LEU 636 29.608 15.009 26.681 1.00 11.87 ATOM 5584 CG LEU 636 30.039 13.556 26.790 1.00 11.87 ATOM 5585 CD1 LEU 636 31.458 13.491 27.258 1.00 11.87 ATOM 5586 CD2 LEU 636 29.121 12.804 27.754 1.00 11.87 ATOM 5588 N VAL 637 26.321 14.166 26.634 1.00 12.32 ATOM 5589 CA VAL 637 25.315 13.869 27.591 1.00 12.32 ATOM 5590 C VAL 637 25.137 12.382 27.869 1.00 12.32 ATOM 5591 O VAL 637 24.885 11.585 26.944 1.00 12.32 ATOM 5592 CB VAL 637 23.992 14.431 27.145 1.00 12.32 ATOM 5593 CG1 VAL 637 22.882 14.144 28.167 1.00 12.32 ATOM 5594 CG2 VAL 637 24.082 15.916 26.839 1.00 12.32 ATOM 5596 N ASN 638 25.280 11.988 29.089 1.00 13.45 ATOM 5597 CA ASN 638 24.954 10.660 29.449 1.00 13.45 ATOM 5598 C ASN 638 23.470 10.781 29.799 1.00 13.45 ATOM 5599 O ASN 638 23.091 11.212 30.888 1.00 13.45 ATOM 5600 CB ASN 638 25.828 10.098 30.584 1.00 13.45 ATOM 5601 CG ASN 638 25.624 8.586 30.826 1.00 13.45 ATOM 5602 ND2 ASN 638 26.677 7.916 31.396 1.00 13.45 ATOM 5603 OD1 ASN 638 24.609 8.010 30.468 1.00 13.45 ATOM 5607 N ALA 639 22.670 10.451 28.833 1.00 14.35 ATOM 5608 CA ALA 639 21.198 10.642 28.860 1.00 14.35 ATOM 5609 C ALA 639 20.434 9.956 29.988 1.00 14.35 ATOM 5610 O ALA 639 19.435 10.511 30.455 1.00 14.35 ATOM 5611 CB ALA 639 20.608 10.240 27.507 1.00 14.35 ATOM 5613 N GLY 640 20.896 8.830 30.452 1.00 14.93 ATOM 5614 CA GLY 640 20.166 8.016 31.465 1.00 14.93 ATOM 5615 C GLY 640 20.276 8.528 32.871 1.00 14.93 ATOM 5616 O GLY 640 20.587 7.774 33.793 1.00 14.93 ATOM 5618 N THR 641 20.096 9.830 33.028 1.00 15.45 ATOM 5619 CA THR 641 20.247 10.476 34.289 1.00 15.45 ATOM 5620 C THR 641 21.671 10.476 34.672 1.00 15.45 ATOM 5621 O THR 641 22.007 10.296 35.791 1.00 15.45 ATOM 5622 CB THR 641 19.390 9.844 35.371 1.00 15.45 ATOM 5623 CG2 THR 641 19.466 10.669 36.653 1.00 15.45 ATOM 5624 OG1 THR 641 18.021 9.816 34.931 1.00 15.45 ATOM 5626 N GLY 642 22.498 10.618 33.697 1.00 13.60 ATOM 5627 CA GLY 642 23.884 10.743 33.891 1.00 13.60 ATOM 5628 C GLY 642 24.270 12.166 33.932 1.00 13.60 ATOM 5629 O GLY 642 23.445 13.031 34.263 1.00 13.60 ATOM 5631 N GLU 643 25.493 12.438 33.673 1.00 11.99 ATOM 5632 CA GLU 643 25.937 13.780 33.631 1.00 11.99 ATOM 5633 C GLU 643 25.712 14.428 32.212 1.00 11.99 ATOM 5634 O GLU 643 25.952 13.788 31.150 1.00 11.99 ATOM 5635 CB GLU 643 27.442 13.879 34.027 1.00 11.99 ATOM 5636 CG GLU 643 27.939 15.339 34.197 1.00 11.99 ATOM 5637 CD GLU 643 29.435 15.462 34.570 1.00 11.99 ATOM 5638 OE1 GLU 643 30.198 14.532 34.247 1.00 11.99 ATOM 5639 OE2 GLU 643 29.836 16.512 35.143 1.00 11.99 ATOM 5641 N THR 644 25.208 15.637 32.225 1.00 11.47 ATOM 5642 CA THR 644 25.080 16.420 31.031 1.00 11.47 ATOM 5643 C THR 644 26.206 17.420 31.068 1.00 11.47 ATOM 5644 O THR 644 26.344 18.180 32.063 1.00 11.47 ATOM 5645 CB THR 644 23.728 17.220 31.026 1.00 11.47 ATOM 5646 CG2 THR 644 23.614 18.094 29.807 1.00 11.47 ATOM 5647 OG1 THR 644 22.596 16.309 31.072 1.00 11.47 ATOM 5649 N GLN 645 27.045 17.429 30.074 1.00 10.82 ATOM 5650 CA GLN 645 28.163 18.294 30.101 1.00 10.82 ATOM 5651 C GLN 645 28.063 19.284 29.025 1.00 10.82 ATOM 5652 O GLN 645 27.920 18.956 27.930 1.00 10.82 ATOM 5653 CB GLN 645 29.520 17.518 29.968 1.00 10.82 ATOM 5654 CG GLN 645 29.590 16.152 30.545 1.00 10.82 ATOM 5655 CD GLN 645 31.042 15.623 30.512 1.00 10.82 ATOM 5656 NE2 GLN 645 31.372 14.674 31.431 1.00 10.82 ATOM 5657 OE1 GLN 645 31.833 16.004 29.646 1.00 10.82 ATOM 5661 N LEU 646 28.195 20.552 29.369 1.00 10.47 ATOM 5662 CA LEU 646 28.143 21.658 28.376 1.00 10.47 ATOM 5663 C LEU 646 29.431 22.274 28.147 1.00 10.47 ATOM 5664 O LEU 646 30.212 22.266 28.978 1.00 10.47 ATOM 5665 CB LEU 646 27.070 22.718 28.728 1.00 10.47 ATOM 5666 CG LEU 646 25.750 22.272 29.432 1.00 10.47 ATOM 5667 CD1 LEU 646 25.147 21.106 28.723 1.00 10.47 ATOM 5668 CD2 LEU 646 26.048 21.851 30.817 1.00 10.47 ATOM 5670 N VAL 647 29.624 22.796 26.918 1.00 10.22 ATOM 5671 CA VAL 647 30.826 23.488 26.582 1.00 10.22 ATOM 5672 C VAL 647 30.563 24.895 26.239 1.00 10.22 ATOM 5673 O VAL 647 29.698 25.212 25.459 1.00 10.22 ATOM 5674 CB VAL 647 31.609 22.837 25.496 1.00 10.22 ATOM 5675 CG1 VAL 647 32.842 23.688 25.177 1.00 10.22 ATOM 5676 CG2 VAL 647 32.026 21.448 25.934 1.00 10.22 ATOM 5678 N PHE 648 31.265 25.716 26.868 1.00 10.81 ATOM 5679 CA PHE 648 31.227 27.103 26.604 1.00 10.81 ATOM 5680 C PHE 648 32.433 27.468 25.936 1.00 10.81 ATOM 5681 O PHE 648 33.454 27.121 26.368 1.00 10.81 ATOM 5682 CB PHE 648 31.168 27.829 27.904 1.00 10.81 ATOM 5683 CG PHE 648 31.248 29.295 27.797 1.00 10.81 ATOM 5684 CD1 PHE 648 30.218 29.998 27.286 1.00 10.81 ATOM 5685 CD2 PHE 648 32.366 29.989 28.290 1.00 10.81 ATOM 5686 CE1 PHE 648 30.259 31.410 27.228 1.00 10.81 ATOM 5687 CE2 PHE 648 32.413 31.374 28.243 1.00 10.81 ATOM 5688 CZ PHE 648 31.372 32.076 27.653 1.00 10.81 ATOM 5690 N THR 649 32.287 28.161 24.804 1.00 11.05 ATOM 5691 CA THR 649 33.429 28.689 24.064 1.00 11.05 ATOM 5692 C THR 649 33.357 30.200 24.049 1.00 11.05 ATOM 5693 O THR 649 32.300 30.792 23.699 1.00 11.05 ATOM 5694 CB THR 649 33.488 28.191 22.640 1.00 11.05 ATOM 5695 CG2 THR 649 34.691 28.806 21.901 1.00 11.05 ATOM 5696 OG1 THR 649 33.606 26.757 22.645 1.00 11.05 ATOM 5698 N ARG 650 34.461 30.872 24.372 1.00 12.31 ATOM 5699 CA ARG 650 34.390 32.296 24.488 1.00 12.31 ATOM 5700 C ARG 650 34.514 33.054 23.144 1.00 12.31 ATOM 5701 O ARG 650 35.567 32.990 22.469 1.00 12.31 ATOM 5702 CB ARG 650 35.359 32.829 25.512 1.00 12.31 ATOM 5703 CG ARG 650 35.021 34.227 25.820 1.00 12.31 ATOM 5704 CD ARG 650 35.676 34.740 27.016 1.00 12.31 ATOM 5705 NE ARG 650 35.260 36.127 27.259 1.00 12.31 ATOM 5706 CZ ARG 650 34.064 36.475 27.754 1.00 12.31 ATOM 5707 NH1 ARG 650 33.174 35.563 27.963 1.00 12.31 ATOM 5708 NH2 ARG 650 33.791 37.755 28.070 1.00 12.31 ATOM 5711 N ASP 651 33.386 33.835 22.779 1.00 13.19 ATOM 5712 CA ASP 651 33.342 34.681 21.481 1.00 13.19 ATOM 5713 C ASP 651 34.304 35.881 21.587 1.00 13.19 ATOM 5714 O ASP 651 35.126 36.133 20.672 1.00 13.19 ATOM 5715 CB ASP 651 31.960 35.294 21.319 1.00 13.19 ATOM 5716 CG ASP 651 30.812 34.291 21.025 1.00 13.19 ATOM 5717 OD1 ASP 651 31.076 33.133 20.551 1.00 13.19 ATOM 5718 OD2 ASP 651 29.652 34.653 21.303 1.00 13.19 ATOM 5720 N SER 652 34.279 36.614 22.746 1.00 14.32 ATOM 5721 CA SER 652 35.254 37.686 22.921 1.00 14.32 ATOM 5722 C SER 652 36.571 37.110 23.455 1.00 14.32 ATOM 5723 O SER 652 36.925 37.147 24.796 1.00 14.32 ATOM 5724 CB SER 652 34.736 38.784 23.823 1.00 14.32 ATOM 5725 OG SER 652 35.629 39.879 23.816 1.00 14.32 ATOM 5727 N ALA 653 37.335 36.642 22.480 1.00 13.99 ATOM 5728 CA ALA 653 38.554 36.112 22.679 1.00 13.99 ATOM 5729 C ALA 653 39.484 37.125 23.238 1.00 13.99 ATOM 5730 O ALA 653 39.421 38.282 22.887 1.00 13.99 ATOM 5731 CB ALA 653 39.108 35.533 21.359 1.00 13.99 ATOM 5733 N GLY 654 40.366 36.665 24.087 1.00 14.22 ATOM 5734 CA GLY 654 41.307 37.508 24.772 1.00 14.22 ATOM 5735 C GLY 654 40.817 37.988 26.117 1.00 14.22 ATOM 5736 O GLY 654 41.581 38.556 26.888 1.00 14.22 ATOM 5738 N SER 655 39.589 37.706 26.467 1.00 13.43 ATOM 5739 CA SER 655 39.141 38.066 27.804 1.00 13.43 ATOM 5740 C SER 655 38.786 36.851 28.642 1.00 13.43 ATOM 5741 O SER 655 37.803 36.257 28.442 1.00 13.43 ATOM 5742 CB SER 655 37.924 39.007 27.726 1.00 13.43 ATOM 5743 OG SER 655 38.316 40.279 27.241 1.00 13.43 ATOM 5745 N ALA 656 39.606 36.502 29.592 1.00 13.17 ATOM 5746 CA ALA 656 39.243 35.447 30.467 1.00 13.17 ATOM 5747 C ALA 656 38.147 35.917 31.374 1.00 13.17 ATOM 5748 O ALA 656 38.069 37.131 31.711 1.00 13.17 ATOM 5749 CB ALA 656 40.423 34.950 31.278 1.00 13.17 ATOM 5751 N VAL 657 37.294 35.046 31.745 1.00 12.62 ATOM 5752 CA VAL 657 36.202 35.450 32.757 1.00 12.62 ATOM 5753 C VAL 657 36.166 34.568 33.978 1.00 12.62 ATOM 5754 O VAL 657 36.202 33.375 33.879 1.00 12.62 ATOM 5755 CB VAL 657 34.779 35.572 32.150 1.00 12.62 ATOM 5756 CG1 VAL 657 34.719 36.734 31.177 1.00 12.62 ATOM 5757 CG2 VAL 657 34.355 34.296 31.447 1.00 12.62 ATOM 5759 N SER 658 36.142 35.185 35.157 1.00 11.94 ATOM 5760 CA SER 658 35.980 34.444 36.341 1.00 11.94 ATOM 5761 C SER 658 34.540 34.446 36.706 1.00 11.94 ATOM 5762 O SER 658 33.934 35.515 36.868 1.00 11.94 ATOM 5763 CB SER 658 36.830 35.024 37.508 1.00 11.94 ATOM 5764 OG SER 658 38.211 34.817 37.283 1.00 11.94 ATOM 5766 N VAL 659 34.011 33.297 36.898 1.00 12.21 ATOM 5767 CA VAL 659 32.615 33.135 37.237 1.00 12.21 ATOM 5768 C VAL 659 32.520 32.439 38.466 1.00 12.21 ATOM 5769 O VAL 659 33.329 31.554 38.747 1.00 12.21 ATOM 5770 CB VAL 659 31.904 32.334 36.120 1.00 12.21 ATOM 5771 CG1 VAL 659 31.738 33.186 34.860 1.00 12.21 ATOM 5772 CG2 VAL 659 32.797 31.164 35.761 1.00 12.21 ATOM 5774 N SER 660 31.591 32.829 39.258 1.00 12.23 ATOM 5775 CA SER 660 31.368 32.179 40.442 1.00 12.23 ATOM 5776 C SER 660 30.787 30.834 40.207 1.00 12.23 ATOM 5777 O SER 660 30.218 30.549 39.136 1.00 12.23 ATOM 5778 CB SER 660 30.406 33.003 41.349 1.00 12.23 ATOM 5779 OG SER 660 30.040 32.256 42.527 1.00 12.23 ATOM 5781 N THR 661 30.948 30.013 41.157 1.00 13.17 ATOM 5782 CA THR 661 30.351 28.698 41.166 1.00 13.17 ATOM 5783 C THR 661 28.853 28.861 41.209 1.00 13.17 ATOM 5784 O THR 661 28.340 29.869 41.755 1.00 13.17 ATOM 5785 CB THR 661 30.789 27.837 42.405 1.00 13.17 ATOM 5786 CG2 THR 661 30.177 26.439 42.332 1.00 13.17 ATOM 5787 OG1 THR 661 32.213 27.707 42.429 1.00 13.17 ATOM 5789 N THR 662 28.187 27.944 40.598 1.00 13.74 ATOM 5790 CA THR 662 26.731 27.940 40.406 1.00 13.74 ATOM 5791 C THR 662 26.230 29.274 39.916 1.00 13.74 ATOM 5792 O THR 662 25.361 29.968 40.587 1.00 13.74 ATOM 5793 CB THR 662 25.999 27.567 41.729 1.00 13.74 ATOM 5794 CG2 THR 662 26.174 28.681 42.802 1.00 13.74 ATOM 5795 OG1 THR 662 24.567 27.365 41.431 1.00 13.74 ATOM 5797 N ALA 663 26.702 29.614 38.670 1.00 13.41 ATOM 5798 CA ALA 663 26.363 30.862 38.009 1.00 13.41 ATOM 5799 C ALA 663 25.085 30.689 37.250 1.00 13.41 ATOM 5800 O ALA 663 24.806 29.620 36.835 1.00 13.41 ATOM 5801 CB ALA 663 27.510 31.334 37.070 1.00 13.41 ATOM 5803 N THR 664 24.310 31.741 37.028 1.00 14.70 ATOM 5804 CA THR 664 23.100 31.579 36.222 1.00 14.70 ATOM 5805 C THR 664 23.341 32.054 34.789 1.00 14.70 ATOM 5806 O THR 664 24.045 33.071 34.555 1.00 14.70 ATOM 5807 CB THR 664 21.903 32.320 36.839 1.00 14.70 ATOM 5808 CG2 THR 664 22.222 33.803 37.048 1.00 14.70 ATOM 5809 OG1 THR 664 20.801 32.212 35.974 1.00 14.70 ATOM 5811 N PHE 665 22.802 31.295 33.826 1.00 14.68 ATOM 5812 CA PHE 665 22.994 31.596 32.445 1.00 14.68 ATOM 5813 C PHE 665 21.664 31.702 31.768 1.00 14.68 ATOM 5814 O PHE 665 20.790 30.835 31.958 1.00 14.68 ATOM 5815 CB PHE 665 23.860 30.475 31.806 1.00 14.68 ATOM 5816 CG PHE 665 25.219 30.395 32.439 1.00 14.68 ATOM 5817 CD1 PHE 665 25.455 29.525 33.487 1.00 14.68 ATOM 5818 CD2 PHE 665 26.199 31.203 32.047 1.00 14.68 ATOM 5819 CE1 PHE 665 26.737 29.393 34.029 1.00 14.68 ATOM 5820 CE2 PHE 665 27.492 31.097 32.617 1.00 14.68 ATOM 5821 CZ PHE 665 27.746 30.129 33.540 1.00 14.68 ATOM 5823 N ALA 666 21.511 32.704 30.962 1.00 16.80 ATOM 5824 CA ALA 666 20.332 32.877 30.198 1.00 16.80 ATOM 5825 C ALA 666 20.716 32.849 28.748 1.00 16.80 ATOM 5826 O ALA 666 21.791 33.323 28.376 1.00 16.80 ATOM 5827 CB ALA 666 19.703 34.238 30.543 1.00 16.80 ATOM 5829 N MET 667 19.900 32.263 27.940 1.00 17.29 ATOM 5830 CA MET 667 20.211 32.144 26.549 1.00 17.29 ATOM 5831 C MET 667 19.670 33.355 25.881 1.00 17.29 ATOM 5832 O MET 667 18.664 33.915 26.361 1.00 17.29 ATOM 5833 CB MET 667 19.515 30.888 25.926 1.00 17.29 ATOM 5834 CG MET 667 19.944 29.463 26.507 1.00 17.29 ATOM 5835 SD MET 667 21.728 29.078 26.283 1.00 17.29 ATOM 5836 CE MET 667 22.453 30.049 27.612 1.00 17.29 ATOM 5838 N ARG 668 20.321 33.850 24.790 1.00 17.50 ATOM 5839 CA ARG 668 19.762 35.007 24.063 1.00 17.50 ATOM 5840 C ARG 668 18.916 34.516 22.892 1.00 17.50 ATOM 5841 O ARG 668 19.361 33.680 22.106 1.00 17.50 ATOM 5842 CB ARG 668 20.843 35.946 23.565 1.00 17.50 ATOM 5843 CG ARG 668 21.730 36.498 24.657 1.00 17.50 ATOM 5844 CD ARG 668 22.679 37.576 24.148 1.00 17.50 ATOM 5845 NE ARG 668 23.610 37.963 25.179 1.00 17.50 ATOM 5846 CZ ARG 668 24.334 39.058 25.138 1.00 17.50 ATOM 5847 NH1 ARG 668 24.183 39.913 24.106 1.00 17.50 ATOM 5848 NH2 ARG 668 25.167 39.357 26.118 1.00 17.50 TER END