####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 563), selected 80 , name T1052TS252_1-D3 # Molecule2: number of CA atoms 80 ( 563), selected 80 , name T1052-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS252_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 3.47 3.47 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 614 - 637 1.94 4.17 LCS_AVERAGE: 22.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 621 - 631 0.91 5.04 LCS_AVERAGE: 9.05 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 589 T 589 3 3 80 0 6 6 9 14 17 22 39 55 60 66 72 76 78 79 80 80 80 80 80 LCS_GDT R 590 R 590 3 8 80 0 3 5 6 11 39 50 59 64 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT Q 591 Q 591 3 8 80 3 7 14 28 39 49 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT Y 592 Y 592 3 8 80 3 4 18 31 43 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 593 A 593 3 8 80 3 6 20 33 43 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT P 594 P 594 4 8 80 3 4 13 25 38 49 58 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT V 595 V 595 4 8 80 3 4 5 10 15 27 33 42 56 61 69 72 76 79 79 80 80 80 80 80 LCS_GDT G 596 G 596 4 8 80 3 4 5 7 15 27 34 46 56 65 70 74 77 79 79 80 80 80 80 80 LCS_GDT G 597 G 597 4 11 80 3 6 12 26 44 51 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT S 598 S 598 3 11 80 3 6 9 26 44 51 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT I 599 I 599 8 13 80 4 18 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT P 600 P 600 8 13 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 601 A 601 8 13 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT S 602 S 602 8 13 80 3 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT G 603 G 603 8 13 80 10 16 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT S 604 S 604 8 13 80 10 16 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT V 605 V 605 8 13 80 10 18 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 606 A 606 8 13 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT L 607 L 607 7 13 80 9 16 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 608 T 608 7 13 80 3 6 14 24 39 49 56 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT P 609 P 609 7 13 80 3 6 14 20 31 43 51 60 67 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 610 T 610 4 13 80 2 4 12 31 40 49 57 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT E 611 E 611 4 13 80 1 11 24 33 42 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT V 612 V 612 3 6 80 2 3 4 4 6 28 34 42 66 69 72 76 77 79 79 80 80 80 80 80 LCS_GDT G 613 G 613 3 6 80 3 3 4 4 8 28 43 59 67 69 72 76 77 79 79 80 80 80 80 80 LCS_GDT I 614 I 614 5 24 80 3 12 24 33 42 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT F 615 F 615 5 24 80 3 13 24 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT W 616 W 616 5 24 80 3 6 17 29 40 49 57 63 67 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT N 617 N 617 5 24 80 3 9 20 33 41 49 57 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT G 618 G 618 5 24 80 7 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 619 A 619 5 24 80 3 12 25 34 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 620 T 620 6 24 80 9 18 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT G 621 G 621 11 24 80 5 18 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT K 622 K 622 11 24 80 5 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT C 623 C 623 11 24 80 5 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT I 624 I 624 11 24 80 5 16 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT F 625 F 625 11 24 80 5 9 22 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT G 626 G 626 11 24 80 4 9 18 28 43 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT G 627 G 627 11 24 80 4 10 20 33 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT I 628 I 628 11 24 80 4 16 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT D 629 D 629 11 24 80 5 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT G 630 G 630 11 24 80 8 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 631 T 631 11 24 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT F 632 F 632 9 24 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT S 633 S 633 9 24 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 634 T 634 9 24 80 4 13 26 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 635 T 635 9 24 80 4 11 25 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT L 636 L 636 9 24 80 3 13 24 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT V 637 V 637 8 24 80 3 7 17 30 39 47 55 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT N 638 N 638 8 21 80 5 8 18 26 40 50 57 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 639 A 639 8 14 80 5 15 24 34 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT G 640 G 640 8 14 80 5 7 12 26 36 47 56 61 64 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 641 T 641 8 14 80 5 7 9 17 24 39 50 59 63 67 72 74 77 79 79 80 80 80 80 80 LCS_GDT G 642 G 642 8 21 80 5 7 13 26 41 50 56 61 65 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT E 643 E 643 8 21 80 4 10 23 32 43 51 57 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 644 T 644 8 21 80 4 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT Q 645 Q 645 8 21 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT L 646 L 646 8 21 80 10 15 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT V 647 V 647 8 21 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT F 648 F 648 8 21 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 649 T 649 8 21 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT R 650 R 650 8 21 80 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT D 651 D 651 8 21 80 9 15 29 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT S 652 S 652 8 21 80 3 8 17 29 41 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 653 A 653 3 21 80 3 8 23 34 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT G 654 G 654 8 21 80 4 7 15 20 37 46 57 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT S 655 S 655 8 21 80 4 7 15 28 43 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 656 A 656 8 21 80 4 10 24 34 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT V 657 V 657 8 21 80 4 9 14 29 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT S 658 S 658 8 21 80 3 9 14 27 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT V 659 V 659 8 21 80 3 9 14 25 41 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT S 660 S 660 8 21 80 3 9 14 25 37 51 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 661 T 661 8 21 80 2 7 20 34 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 662 T 662 7 21 80 3 6 19 25 38 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 663 A 663 7 20 80 3 9 22 34 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT T 664 T 664 7 14 80 4 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT F 665 F 665 7 14 80 4 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT A 666 A 666 7 14 80 4 11 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT M 667 M 667 7 14 80 3 5 12 26 34 48 56 61 68 70 73 76 77 79 79 80 80 80 80 80 LCS_GDT R 668 R 668 7 14 80 3 3 10 16 30 40 52 59 64 70 73 76 77 79 79 80 80 80 80 80 LCS_AVERAGE LCS_A: 43.81 ( 9.05 22.38 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 19 31 35 44 52 59 63 68 70 73 76 77 79 79 80 80 80 80 80 GDT PERCENT_AT 12.50 23.75 38.75 43.75 55.00 65.00 73.75 78.75 85.00 87.50 91.25 95.00 96.25 98.75 98.75 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.27 0.75 1.02 1.18 1.62 1.95 2.18 2.32 2.57 2.66 2.86 3.07 3.16 3.36 3.37 3.47 3.47 3.47 3.47 3.47 GDT RMS_ALL_AT 4.03 3.77 3.71 3.77 3.55 3.51 3.54 3.60 3.53 3.57 3.51 3.50 3.49 3.47 3.47 3.47 3.47 3.47 3.47 3.47 # Checking swapping # possible swapping detected: Y 592 Y 592 # possible swapping detected: F 615 F 615 # possible swapping detected: F 632 F 632 # possible swapping detected: E 643 E 643 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA T 589 T 589 9.508 0 0.596 1.423 14.214 0.000 0.000 11.297 LGA R 590 R 590 6.882 0 0.627 1.562 10.442 0.000 0.000 7.954 LGA Q 591 Q 591 3.705 0 0.671 1.101 6.143 30.000 14.141 6.143 LGA Y 592 Y 592 2.702 0 0.099 1.174 13.514 20.909 6.970 13.514 LGA A 593 A 593 2.870 0 0.499 0.562 5.341 16.364 20.727 - LGA P 594 P 594 3.872 0 0.168 0.439 5.424 7.273 11.948 3.405 LGA V 595 V 595 7.961 0 0.482 0.632 10.158 0.000 0.000 10.158 LGA G 596 G 596 7.160 0 0.198 0.198 7.160 0.000 0.000 - LGA G 597 G 597 3.332 0 0.634 0.634 3.619 16.364 16.364 - LGA S 598 S 598 3.434 0 0.207 0.721 4.099 16.364 14.848 4.099 LGA I 599 I 599 2.048 0 0.608 0.733 4.511 26.364 26.136 2.636 LGA P 600 P 600 1.503 0 0.221 0.512 2.226 47.727 51.169 1.813 LGA A 601 A 601 1.330 0 0.689 0.626 3.637 44.545 52.000 - LGA S 602 S 602 0.979 0 0.695 0.638 2.627 68.182 67.273 1.343 LGA G 603 G 603 1.882 0 0.094 0.094 2.002 59.091 59.091 - LGA S 604 S 604 1.582 0 0.046 0.057 1.836 54.545 55.758 1.576 LGA V 605 V 605 1.098 0 0.113 0.118 1.614 61.818 61.299 1.264 LGA A 606 A 606 0.783 0 0.140 0.178 2.160 62.727 66.545 - LGA L 607 L 607 1.597 0 0.074 0.153 2.502 49.545 56.136 0.910 LGA T 608 T 608 4.231 0 0.104 1.112 6.187 6.364 3.896 6.187 LGA P 609 P 609 5.318 0 0.498 0.797 8.482 7.273 4.156 8.482 LGA T 610 T 610 3.584 0 0.382 1.112 7.170 14.545 12.987 2.864 LGA E 611 E 611 2.827 0 0.570 1.055 9.625 20.909 10.505 9.625 LGA V 612 V 612 5.606 0 0.128 0.941 9.926 4.545 2.597 8.702 LGA G 613 G 613 5.295 0 0.753 0.753 5.755 3.182 3.182 - LGA I 614 I 614 2.877 0 0.558 1.711 6.897 35.909 17.955 6.897 LGA F 615 F 615 1.762 0 0.321 1.008 5.067 31.818 28.430 5.067 LGA W 616 W 616 4.751 0 0.577 1.408 15.139 10.455 2.987 15.139 LGA N 617 N 617 3.822 0 0.327 0.719 7.162 16.364 8.182 5.365 LGA G 618 G 618 0.759 0 0.040 0.040 2.532 60.000 60.000 - LGA A 619 A 619 2.607 0 0.181 0.236 3.881 56.364 47.273 - LGA T 620 T 620 1.100 0 0.132 0.163 2.650 61.818 51.948 2.650 LGA G 621 G 621 2.267 0 0.100 0.100 2.267 44.545 44.545 - LGA K 622 K 622 2.497 0 0.038 0.732 2.555 38.182 35.758 2.537 LGA C 623 C 623 2.387 0 0.082 0.750 3.806 35.455 30.000 3.806 LGA I 624 I 624 1.799 0 0.092 0.119 2.504 38.636 54.091 0.732 LGA F 625 F 625 2.242 0 0.600 0.843 4.992 26.364 36.529 3.070 LGA G 626 G 626 2.610 0 0.735 0.735 4.116 30.455 30.455 - LGA G 627 G 627 1.682 0 0.123 0.123 2.103 51.364 51.364 - LGA I 628 I 628 0.791 0 0.094 0.115 2.040 77.727 68.409 0.905 LGA D 629 D 629 1.093 0 0.115 1.027 3.136 69.545 53.864 3.023 LGA G 630 G 630 0.979 0 0.104 0.104 1.622 70.000 70.000 - LGA T 631 T 631 1.023 0 0.065 0.111 1.208 73.636 70.130 1.039 LGA F 632 F 632 0.828 0 0.162 1.141 7.949 77.727 38.347 7.949 LGA S 633 S 633 0.688 0 0.095 0.150 0.814 81.818 81.818 0.527 LGA T 634 T 634 1.627 0 0.132 1.089 3.036 45.455 43.117 3.036 LGA T 635 T 635 2.340 0 0.727 0.657 4.525 26.364 33.247 2.124 LGA L 636 L 636 2.056 0 0.621 1.352 6.253 35.455 22.045 4.257 LGA V 637 V 637 5.151 0 0.612 1.417 9.468 1.364 0.779 8.297 LGA N 638 N 638 5.306 0 0.120 0.118 10.103 2.273 1.136 8.081 LGA A 639 A 639 3.364 0 0.056 0.052 5.493 7.727 11.636 - LGA G 640 G 640 7.530 0 0.079 0.079 9.010 0.000 0.000 - LGA T 641 T 641 9.071 0 0.151 0.176 10.757 0.000 0.000 8.267 LGA G 642 G 642 6.075 0 0.048 0.048 6.761 0.000 0.000 - LGA E 643 E 643 4.787 0 0.035 0.935 7.188 7.727 3.434 7.188 LGA T 644 T 644 2.380 0 0.102 0.200 3.300 28.182 29.351 2.815 LGA Q 645 Q 645 1.816 0 0.157 1.127 4.043 54.545 42.424 0.871 LGA L 646 L 646 1.926 0 0.034 1.317 5.257 54.545 39.091 2.394 LGA V 647 V 647 1.215 0 0.032 0.043 1.538 61.818 63.377 1.167 LGA F 648 F 648 0.965 0 0.033 0.511 1.846 77.727 70.248 1.102 LGA T 649 T 649 0.924 0 0.071 0.085 1.134 73.636 72.468 1.042 LGA R 650 R 650 1.414 0 0.393 1.192 3.200 58.636 53.554 3.200 LGA D 651 D 651 2.251 0 0.101 0.303 5.656 44.545 26.591 5.656 LGA S 652 S 652 2.544 0 0.492 0.505 4.379 27.273 24.242 3.164 LGA A 653 A 653 2.094 0 0.097 0.118 3.614 55.000 46.182 - LGA G 654 G 654 3.670 0 0.460 0.460 3.670 29.091 29.091 - LGA S 655 S 655 2.928 0 0.072 0.137 4.791 27.727 19.697 4.791 LGA A 656 A 656 1.872 0 0.074 0.095 2.511 38.636 38.545 - LGA V 657 V 657 2.718 0 0.662 0.987 5.157 24.545 20.519 5.157 LGA S 658 S 658 2.854 0 0.306 0.728 4.137 30.000 22.727 4.137 LGA V 659 V 659 2.996 0 0.219 1.136 4.606 18.636 25.714 4.606 LGA S 660 S 660 3.545 0 0.609 0.582 5.249 11.818 9.697 4.380 LGA T 661 T 661 1.443 0 0.246 1.113 4.502 58.182 44.416 4.502 LGA T 662 T 662 3.395 0 0.672 0.591 6.889 33.182 18.961 5.347 LGA A 663 A 663 1.875 0 0.073 0.098 2.721 35.909 38.909 - LGA T 664 T 664 2.596 0 0.064 0.065 4.278 38.636 25.974 3.885 LGA F 665 F 665 2.043 0 0.035 1.330 8.458 32.727 17.521 8.390 LGA A 666 A 666 3.153 0 0.673 0.656 6.081 12.727 17.818 - LGA M 667 M 667 5.064 0 0.204 1.114 10.039 1.364 0.682 10.039 LGA R 668 R 668 6.242 0 0.062 1.132 9.200 0.000 0.000 6.391 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 80 320 320 100.00 563 563 100.00 80 59 SUMMARY(RMSD_GDC): 3.469 3.476 4.459 33.528 30.163 21.602 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 63 2.32 61.562 56.367 2.599 LGA_LOCAL RMSD: 2.324 Number of atoms: 63 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.604 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 3.469 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.637158 * X + 0.508605 * Y + -0.579095 * Z + 48.268867 Y_new = -0.496884 * X + -0.303305 * Y + -0.813088 * Z + 51.418526 Z_new = -0.589183 * X + 0.805808 * Y + 0.059464 * Z + -15.582100 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.662330 0.630047 1.497135 [DEG: -37.9487 36.0991 85.7795 ] ZXZ: -0.618878 1.511297 -0.631341 [DEG: -35.4591 86.5909 -36.1732 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1052TS252_1-D3 REMARK 2: T1052-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS252_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 63 2.32 56.367 3.47 REMARK ---------------------------------------------------------- MOLECULE T1052TS252_1-D3 PFRMAT TS TARGET T1052 MODEL 1 PARENT N/A ATOM 5481 N THR 589 18.389 25.192 38.152 1.00 4.54 ATOM 5482 CA THR 589 19.314 24.755 39.151 1.00 4.54 ATOM 5483 C THR 589 20.650 24.364 38.541 1.00 4.54 ATOM 5484 O THR 589 21.699 24.762 39.044 1.00 4.54 ATOM 5486 CB THR 589 18.758 23.565 39.954 1.00 4.54 ATOM 5488 OG1 THR 589 17.567 23.964 40.642 1.00 4.54 ATOM 5489 CG2 THR 589 19.776 23.090 40.979 1.00 4.54 ATOM 5490 N ARG 590 20.677 23.583 37.437 1.00 4.60 ATOM 5491 CA ARG 590 21.931 23.070 36.913 1.00 4.60 ATOM 5492 C ARG 590 22.854 24.168 36.563 1.00 4.60 ATOM 5493 O ARG 590 24.052 24.069 36.815 1.00 4.60 ATOM 5495 CB ARG 590 21.678 22.187 35.689 1.00 4.60 ATOM 5496 CD ARG 590 23.527 20.506 35.934 1.00 4.60 ATOM 5498 NE ARG 590 24.384 21.035 36.992 1.00 4.60 ATOM 5499 CG ARG 590 22.941 21.611 35.069 1.00 4.60 ATOM 5500 CZ ARG 590 24.835 20.318 38.016 1.00 4.60 ATOM 5503 NH1 ARG 590 25.609 20.884 38.931 1.00 4.60 ATOM 5506 NH2 ARG 590 24.510 19.037 38.124 1.00 4.60 ATOM 5507 N GLN 591 22.256 25.190 35.992 1.00 4.66 ATOM 5508 CA GLN 591 22.902 26.268 35.343 1.00 4.66 ATOM 5509 C GLN 591 23.940 26.935 36.231 1.00 4.66 ATOM 5510 O GLN 591 24.817 27.639 35.732 1.00 4.66 ATOM 5512 CB GLN 591 21.877 27.308 34.885 1.00 4.66 ATOM 5513 CD GLN 591 20.106 28.987 35.533 1.00 4.66 ATOM 5514 CG GLN 591 21.168 28.023 36.024 1.00 4.66 ATOM 5515 OE1 GLN 591 19.723 28.962 34.365 1.00 4.66 ATOM 5518 NE2 GLN 591 19.627 29.843 36.430 1.00 4.66 ATOM 5519 N TYR 592 23.888 26.734 37.570 1.00 5.07 ATOM 5520 CA TYR 592 24.749 27.345 38.563 1.00 5.07 ATOM 5521 C TYR 592 25.720 26.292 39.031 1.00 5.07 ATOM 5522 O TYR 592 25.323 25.161 39.296 1.00 5.07 ATOM 5524 CB TYR 592 23.920 27.912 39.717 1.00 5.07 ATOM 5525 CG TYR 592 24.747 28.543 40.814 1.00 5.07 ATOM 5527 OH TYR 592 27.019 30.294 43.824 1.00 5.07 ATOM 5528 CZ TYR 592 26.268 29.712 42.828 1.00 5.07 ATOM 5529 CD1 TYR 592 24.930 29.919 40.863 1.00 5.07 ATOM 5530 CE1 TYR 592 25.685 30.505 41.862 1.00 5.07 ATOM 5531 CD2 TYR 592 25.342 27.761 41.796 1.00 5.07 ATOM 5532 CE2 TYR 592 26.099 28.329 42.802 1.00 5.07 ATOM 5533 N ALA 593 27.023 26.701 39.135 1.00 5.39 ATOM 5534 CA ALA 593 28.236 26.001 39.502 1.00 5.39 ATOM 5535 C ALA 593 29.441 26.950 39.532 1.00 5.39 ATOM 5536 O ALA 593 29.857 27.382 40.605 1.00 5.39 ATOM 5538 CB ALA 593 28.500 24.856 38.537 1.00 5.39 ATOM 5539 N PRO 594 29.987 27.273 38.376 1.00 5.39 ATOM 5540 CA PRO 594 31.317 27.797 38.206 1.00 5.39 ATOM 5541 C PRO 594 31.847 28.826 39.084 1.00 5.39 ATOM 5542 O PRO 594 31.316 29.934 39.127 1.00 5.39 ATOM 5543 CB PRO 594 31.306 28.386 36.795 1.00 5.39 ATOM 5544 CD PRO 594 29.175 27.326 37.048 1.00 5.39 ATOM 5545 CG PRO 594 30.281 27.586 36.063 1.00 5.39 ATOM 5546 N VAL 595 32.912 28.449 39.787 1.00 5.66 ATOM 5547 CA VAL 595 33.431 29.447 40.619 1.00 5.66 ATOM 5548 C VAL 595 34.251 30.516 39.988 1.00 5.66 ATOM 5549 O VAL 595 33.716 31.543 39.579 1.00 5.66 ATOM 5551 CB VAL 595 34.301 28.851 41.742 1.00 5.66 ATOM 5552 CG1 VAL 595 33.472 27.932 42.626 1.00 5.66 ATOM 5553 CG2 VAL 595 35.489 28.104 41.155 1.00 5.66 ATOM 5554 N GLY 596 35.555 30.251 39.910 1.00 5.66 ATOM 5555 CA GLY 596 36.510 31.250 39.558 1.00 5.66 ATOM 5556 C GLY 596 36.861 31.460 38.159 1.00 5.66 ATOM 5557 O GLY 596 37.063 32.596 37.737 1.00 5.66 ATOM 5559 N GLY 597 36.925 30.342 37.433 1.00 5.97 ATOM 5560 CA GLY 597 37.675 30.239 36.234 1.00 5.97 ATOM 5561 C GLY 597 37.538 31.393 35.343 1.00 5.97 ATOM 5562 O GLY 597 36.423 31.831 35.068 1.00 5.97 ATOM 5564 N SER 598 38.741 31.827 34.923 1.00 5.40 ATOM 5565 CA SER 598 38.941 32.672 33.801 1.00 5.40 ATOM 5566 C SER 598 38.944 31.547 32.828 1.00 5.40 ATOM 5567 O SER 598 39.936 30.829 32.719 1.00 5.40 ATOM 5569 CB SER 598 40.219 33.496 33.971 1.00 5.40 ATOM 5571 OG SER 598 40.101 34.402 35.055 1.00 5.40 ATOM 5572 N ILE 599 37.807 31.430 32.127 1.00 5.10 ATOM 5573 CA ILE 599 37.310 30.148 31.739 1.00 5.10 ATOM 5574 C ILE 599 38.081 29.322 30.837 1.00 5.10 ATOM 5575 O ILE 599 38.370 28.169 31.149 1.00 5.10 ATOM 5577 CB ILE 599 35.919 30.255 31.087 1.00 5.10 ATOM 5578 CD1 ILE 599 33.555 31.105 31.515 1.00 5.10 ATOM 5579 CG1 ILE 599 34.879 30.690 32.119 1.00 5.10 ATOM 5580 CG2 ILE 599 35.542 28.941 30.420 1.00 5.10 ATOM 5581 N PRO 600 38.458 29.778 29.745 1.00 5.62 ATOM 5582 CA PRO 600 39.865 29.847 29.768 1.00 5.62 ATOM 5583 C PRO 600 40.112 31.249 29.565 1.00 5.62 ATOM 5584 O PRO 600 39.363 32.086 30.066 1.00 5.62 ATOM 5585 CB PRO 600 40.299 28.940 28.615 1.00 5.62 ATOM 5586 CD PRO 600 37.913 28.777 28.715 1.00 5.62 ATOM 5587 CG PRO 600 39.163 27.989 28.440 1.00 5.62 ATOM 5588 N ALA 601 41.162 31.521 28.823 1.00 6.49 ATOM 5589 CA ALA 601 41.020 32.739 28.156 1.00 6.49 ATOM 5590 C ALA 601 40.595 32.159 26.847 1.00 6.49 ATOM 5591 O ALA 601 41.335 31.380 26.249 1.00 6.49 ATOM 5593 CB ALA 601 42.326 33.518 28.190 1.00 6.49 ATOM 5594 N SER 602 39.392 32.548 26.387 1.00 5.48 ATOM 5595 CA SER 602 38.781 32.262 25.119 1.00 5.48 ATOM 5596 C SER 602 38.534 30.816 24.816 1.00 5.48 ATOM 5597 O SER 602 38.192 30.472 23.687 1.00 5.48 ATOM 5599 CB SER 602 39.628 32.828 23.977 1.00 5.48 ATOM 5601 OG SER 602 40.768 32.020 23.738 1.00 5.48 ATOM 5602 N GLY 603 38.683 29.907 25.792 1.00 5.49 ATOM 5603 CA GLY 603 38.595 28.518 25.464 1.00 5.49 ATOM 5604 C GLY 603 37.276 27.972 25.854 1.00 5.49 ATOM 5605 O GLY 603 36.256 28.632 25.665 1.00 5.49 ATOM 5607 N SER 604 37.314 26.752 26.413 1.00 5.48 ATOM 5608 CA SER 604 36.092 26.120 26.763 1.00 5.48 ATOM 5609 C SER 604 36.146 25.723 28.196 1.00 5.48 ATOM 5610 O SER 604 37.220 25.713 28.792 1.00 5.48 ATOM 5612 CB SER 604 35.838 24.910 25.862 1.00 5.48 ATOM 5614 OG SER 604 35.729 25.299 24.504 1.00 5.48 ATOM 5615 N VAL 605 34.950 25.393 28.716 1.00 5.56 ATOM 5616 CA VAL 605 34.717 24.947 30.052 1.00 5.56 ATOM 5617 C VAL 605 33.685 23.857 29.940 1.00 5.56 ATOM 5618 O VAL 605 33.026 23.736 28.909 1.00 5.56 ATOM 5620 CB VAL 605 34.267 26.104 30.963 1.00 5.56 ATOM 5621 CG1 VAL 605 32.933 26.664 30.492 1.00 5.56 ATOM 5622 CG2 VAL 605 34.173 25.639 32.408 1.00 5.56 ATOM 5623 N ALA 606 33.504 23.036 30.987 1.00 5.30 ATOM 5624 CA ALA 606 32.516 22.018 30.810 1.00 5.30 ATOM 5625 C ALA 606 31.507 22.145 31.891 1.00 5.30 ATOM 5626 O ALA 606 31.850 22.051 33.068 1.00 5.30 ATOM 5628 CB ALA 606 33.165 20.643 30.812 1.00 5.30 ATOM 5629 N LEU 607 30.247 22.353 31.488 1.00 5.17 ATOM 5630 CA LEU 607 29.206 22.398 32.455 1.00 5.17 ATOM 5631 C LEU 607 28.542 21.085 32.270 1.00 5.17 ATOM 5632 O LEU 607 28.467 20.584 31.150 1.00 5.17 ATOM 5634 CB LEU 607 28.302 23.609 32.213 1.00 5.17 ATOM 5635 CG LEU 607 28.978 24.980 32.256 1.00 5.17 ATOM 5636 CD1 LEU 607 27.984 26.081 31.920 1.00 5.17 ATOM 5637 CD2 LEU 607 29.602 25.228 33.621 1.00 5.17 ATOM 5638 N THR 608 28.031 20.489 33.367 1.00 5.23 ATOM 5639 CA THR 608 27.367 19.217 33.306 1.00 5.23 ATOM 5640 C THR 608 25.911 19.415 33.614 1.00 5.23 ATOM 5641 O THR 608 25.574 20.017 34.631 1.00 5.23 ATOM 5643 CB THR 608 27.996 18.205 34.282 1.00 5.23 ATOM 5645 OG1 THR 608 29.370 17.993 33.937 1.00 5.23 ATOM 5646 CG2 THR 608 27.265 16.872 34.212 1.00 5.23 ATOM 5647 N PRO 609 25.095 18.900 32.731 1.00 5.06 ATOM 5648 CA PRO 609 23.675 19.086 32.803 1.00 5.06 ATOM 5649 C PRO 609 22.900 18.696 33.993 1.00 5.06 ATOM 5650 O PRO 609 22.325 19.552 34.662 1.00 5.06 ATOM 5651 CB PRO 609 23.135 18.257 31.636 1.00 5.06 ATOM 5652 CD PRO 609 25.515 18.153 31.419 1.00 5.06 ATOM 5653 CG PRO 609 24.239 18.257 30.633 1.00 5.06 ATOM 5654 N THR 610 22.847 17.394 34.324 1.00 5.61 ATOM 5655 CA THR 610 21.846 17.004 35.261 1.00 5.61 ATOM 5656 C THR 610 20.568 17.668 34.827 1.00 5.61 ATOM 5657 O THR 610 20.101 18.596 35.485 1.00 5.61 ATOM 5659 CB THR 610 22.235 17.395 36.699 1.00 5.61 ATOM 5661 OG1 THR 610 23.602 17.041 36.940 1.00 5.61 ATOM 5662 CG2 THR 610 21.358 16.665 37.705 1.00 5.61 ATOM 5663 N GLU 611 19.998 17.178 33.708 1.00 5.80 ATOM 5664 CA GLU 611 18.709 17.624 33.282 1.00 5.80 ATOM 5665 C GLU 611 18.731 19.058 33.052 1.00 5.80 ATOM 5666 O GLU 611 17.721 19.729 33.254 1.00 5.80 ATOM 5668 CB GLU 611 17.646 17.259 34.321 1.00 5.80 ATOM 5669 CD GLU 611 17.104 14.939 33.479 1.00 5.80 ATOM 5670 CG GLU 611 17.584 15.776 34.650 1.00 5.80 ATOM 5671 OE1 GLU 611 16.547 15.519 32.524 1.00 5.80 ATOM 5672 OE2 GLU 611 17.286 13.704 33.519 1.00 5.80 ATOM 5673 N VAL 612 19.915 19.544 32.609 1.00 7.28 ATOM 5674 CA VAL 612 20.064 20.909 32.309 1.00 7.28 ATOM 5675 C VAL 612 19.021 21.123 31.418 1.00 7.28 ATOM 5676 O VAL 612 18.900 20.405 30.427 1.00 7.28 ATOM 5678 CB VAL 612 21.464 21.214 31.745 1.00 7.28 ATOM 5679 CG1 VAL 612 21.657 20.530 30.400 1.00 7.28 ATOM 5680 CG2 VAL 612 21.672 22.715 31.618 1.00 7.28 ATOM 5681 N GLY 613 18.352 22.137 31.882 1.00 8.79 ATOM 5682 CA GLY 613 17.001 22.132 31.871 1.00 8.79 ATOM 5683 C GLY 613 16.824 22.338 30.501 1.00 8.79 ATOM 5684 O GLY 613 17.699 22.899 29.845 1.00 8.79 ATOM 5686 N ILE 614 15.636 21.838 30.187 1.00 5.40 ATOM 5687 CA ILE 614 14.986 21.765 28.966 1.00 5.40 ATOM 5688 C ILE 614 16.017 22.167 28.043 1.00 5.40 ATOM 5689 O ILE 614 15.937 23.248 27.463 1.00 5.40 ATOM 5691 CB ILE 614 13.726 22.651 28.942 1.00 5.40 ATOM 5692 CD1 ILE 614 12.960 25.082 28.908 1.00 5.40 ATOM 5693 CG1 ILE 614 14.104 24.120 29.143 1.00 5.40 ATOM 5694 CG2 ILE 614 12.722 22.177 29.982 1.00 5.40 ATOM 5695 N PHE 615 17.020 21.325 27.860 1.00 6.10 ATOM 5696 CA PHE 615 17.944 21.851 26.952 1.00 6.10 ATOM 5697 C PHE 615 17.452 21.053 25.872 1.00 6.10 ATOM 5698 O PHE 615 17.088 19.897 26.076 1.00 6.10 ATOM 5700 CB PHE 615 19.373 21.624 27.450 1.00 6.10 ATOM 5701 CG PHE 615 20.429 22.157 26.524 1.00 6.10 ATOM 5702 CZ PHE 615 22.383 23.136 24.807 1.00 6.10 ATOM 5703 CD1 PHE 615 21.085 23.341 26.809 1.00 6.10 ATOM 5704 CE1 PHE 615 22.057 23.831 25.956 1.00 6.10 ATOM 5705 CD2 PHE 615 20.766 21.473 25.369 1.00 6.10 ATOM 5706 CE2 PHE 615 21.737 21.963 24.517 1.00 6.10 ATOM 5707 N TRP 616 17.459 21.703 24.725 1.00 6.10 ATOM 5708 CA TRP 616 16.898 21.363 23.474 1.00 6.10 ATOM 5709 C TRP 616 17.359 20.065 22.969 1.00 6.10 ATOM 5710 O TRP 616 16.545 19.189 22.686 1.00 6.10 ATOM 5712 CB TRP 616 17.212 22.440 22.435 1.00 6.10 ATOM 5715 CG TRP 616 16.645 22.150 21.079 1.00 6.10 ATOM 5716 CD1 TRP 616 16.408 20.921 20.536 1.00 6.10 ATOM 5718 NE1 TRP 616 15.882 21.052 19.273 1.00 6.10 ATOM 5719 CD2 TRP 616 16.241 23.110 20.094 1.00 6.10 ATOM 5720 CE2 TRP 616 15.771 22.389 18.981 1.00 6.10 ATOM 5721 CH2 TRP 616 15.300 24.385 17.810 1.00 6.10 ATOM 5722 CZ2 TRP 616 15.298 23.019 17.831 1.00 6.10 ATOM 5723 CE3 TRP 616 16.233 24.507 20.046 1.00 6.10 ATOM 5724 CZ3 TRP 616 15.761 25.126 18.903 1.00 6.10 ATOM 5725 N ASN 617 18.663 19.929 22.860 1.00 7.47 ATOM 5726 CA ASN 617 19.134 18.720 22.327 1.00 7.47 ATOM 5727 C ASN 617 20.561 19.059 22.285 1.00 7.47 ATOM 5728 O ASN 617 21.018 19.901 23.055 1.00 7.47 ATOM 5730 CB ASN 617 18.445 18.416 20.995 1.00 7.47 ATOM 5731 CG ASN 617 18.633 16.977 20.556 1.00 7.47 ATOM 5732 OD1 ASN 617 19.586 16.314 20.964 1.00 7.47 ATOM 5735 ND2 ASN 617 17.722 16.491 19.721 1.00 7.47 ATOM 5736 N GLY 618 21.268 18.399 21.371 1.00 10.15 ATOM 5737 CA GLY 618 22.665 18.468 21.091 1.00 10.15 ATOM 5738 C GLY 618 23.018 19.825 20.628 1.00 10.15 ATOM 5739 O GLY 618 24.198 20.141 20.484 1.00 10.15 ATOM 5741 N ALA 619 21.974 20.602 20.413 1.00 7.89 ATOM 5742 CA ALA 619 22.063 21.893 19.859 1.00 7.89 ATOM 5743 C ALA 619 22.980 22.756 20.632 1.00 7.89 ATOM 5744 O ALA 619 23.572 22.307 21.612 1.00 7.89 ATOM 5746 CB ALA 619 20.686 22.535 19.789 1.00 7.89 ATOM 5747 N THR 620 23.043 23.984 20.141 1.00 6.66 ATOM 5748 CA THR 620 23.842 24.951 20.775 1.00 6.66 ATOM 5749 C THR 620 22.881 25.848 21.417 1.00 6.66 ATOM 5750 O THR 620 21.674 25.633 21.318 1.00 6.66 ATOM 5752 CB THR 620 24.761 25.671 19.771 1.00 6.66 ATOM 5754 OG1 THR 620 23.967 26.431 18.852 1.00 6.66 ATOM 5755 CG2 THR 620 25.583 24.662 18.984 1.00 6.66 ATOM 5756 N GLY 621 23.437 26.860 22.068 1.00 6.41 ATOM 5757 CA GLY 621 22.591 27.797 22.684 1.00 6.41 ATOM 5758 C GLY 621 23.448 28.945 23.063 1.00 6.41 ATOM 5759 O GLY 621 24.670 28.819 23.090 1.00 6.41 ATOM 5761 N LYS 622 22.820 30.081 23.370 1.00 5.58 ATOM 5762 CA LYS 622 23.659 31.149 23.787 1.00 5.58 ATOM 5763 C LYS 622 23.213 31.503 25.160 1.00 5.58 ATOM 5764 O LYS 622 22.019 31.475 25.446 1.00 5.58 ATOM 5766 CB LYS 622 23.561 32.321 22.808 1.00 5.58 ATOM 5767 CD LYS 622 24.013 33.235 20.515 1.00 5.58 ATOM 5768 CE LYS 622 24.489 32.913 19.108 1.00 5.58 ATOM 5769 CG LYS 622 24.079 32.011 21.414 1.00 5.58 ATOM 5773 NZ LYS 622 24.423 34.102 18.214 1.00 5.58 ATOM 5774 N CYS 623 24.168 31.856 26.041 1.00 5.50 ATOM 5775 CA CYS 623 23.807 32.171 27.394 1.00 5.50 ATOM 5776 C CYS 623 24.627 33.341 27.869 1.00 5.50 ATOM 5777 O CYS 623 25.709 33.590 27.343 1.00 5.50 ATOM 5779 CB CYS 623 24.009 30.955 28.300 1.00 5.50 ATOM 5780 SG CYS 623 23.023 29.511 27.843 1.00 5.50 ATOM 5781 N ILE 624 24.122 34.074 28.882 1.00 5.35 ATOM 5782 CA ILE 624 24.901 35.174 29.385 1.00 5.35 ATOM 5783 C ILE 624 25.180 34.957 30.843 1.00 5.35 ATOM 5784 O ILE 624 24.272 35.056 31.665 1.00 5.35 ATOM 5786 CB ILE 624 24.190 36.520 29.157 1.00 5.35 ATOM 5787 CD1 ILE 624 23.062 37.942 27.366 1.00 5.35 ATOM 5788 CG1 ILE 624 23.933 36.741 27.665 1.00 5.35 ATOM 5789 CG2 ILE 624 24.993 37.658 29.768 1.00 5.35 ATOM 5790 N PHE 625 26.455 34.666 31.153 1.00 5.13 ATOM 5791 CA PHE 625 26.937 34.336 32.470 1.00 5.13 ATOM 5792 C PHE 625 26.953 35.509 33.372 1.00 5.13 ATOM 5793 O PHE 625 26.403 35.449 34.469 1.00 5.13 ATOM 5795 CB PHE 625 28.342 33.735 32.391 1.00 5.13 ATOM 5796 CG PHE 625 28.373 32.333 31.853 1.00 5.13 ATOM 5797 CZ PHE 625 28.437 29.739 30.857 1.00 5.13 ATOM 5798 CD1 PHE 625 27.268 31.797 31.216 1.00 5.13 ATOM 5799 CE1 PHE 625 27.296 30.508 30.720 1.00 5.13 ATOM 5800 CD2 PHE 625 29.507 31.552 31.982 1.00 5.13 ATOM 5801 CE2 PHE 625 29.535 30.263 31.486 1.00 5.13 ATOM 5802 N GLY 626 27.597 36.517 32.819 1.00 5.50 ATOM 5803 CA GLY 626 27.716 37.855 33.214 1.00 5.50 ATOM 5804 C GLY 626 27.387 38.325 31.861 1.00 5.50 ATOM 5805 O GLY 626 26.572 37.711 31.177 1.00 5.50 ATOM 5807 N GLY 627 28.001 39.410 31.422 1.00 5.75 ATOM 5808 CA GLY 627 27.752 39.847 30.094 1.00 5.75 ATOM 5809 C GLY 627 28.253 38.820 29.153 1.00 5.75 ATOM 5810 O GLY 627 27.810 38.765 28.007 1.00 5.75 ATOM 5812 N ILE 628 29.190 37.977 29.629 1.00 5.80 ATOM 5813 CA ILE 628 29.882 37.046 28.799 1.00 5.80 ATOM 5814 C ILE 628 28.970 36.328 27.887 1.00 5.80 ATOM 5815 O ILE 628 28.181 35.497 28.331 1.00 5.80 ATOM 5817 CB ILE 628 30.673 36.023 29.634 1.00 5.80 ATOM 5818 CD1 ILE 628 32.698 37.564 29.791 1.00 5.80 ATOM 5819 CG1 ILE 628 31.677 36.737 30.542 1.00 5.80 ATOM 5820 CG2 ILE 628 31.351 35.006 28.730 1.00 5.80 ATOM 5821 N ASP 629 29.108 36.667 26.607 1.00 5.64 ATOM 5822 CA ASP 629 28.271 36.014 25.676 1.00 5.64 ATOM 5823 C ASP 629 28.995 34.834 25.188 1.00 5.64 ATOM 5824 O ASP 629 30.222 34.802 25.228 1.00 5.64 ATOM 5826 CB ASP 629 27.890 36.965 24.539 1.00 5.64 ATOM 5827 CG ASP 629 29.085 37.383 23.704 1.00 5.64 ATOM 5828 OD1 ASP 629 29.907 38.180 24.201 1.00 5.64 ATOM 5829 OD2 ASP 629 29.198 36.912 22.552 1.00 5.64 ATOM 5830 N GLY 630 28.243 33.844 24.713 1.00 5.25 ATOM 5831 CA GLY 630 29.036 32.790 24.224 1.00 5.25 ATOM 5832 C GLY 630 28.157 31.727 23.762 1.00 5.25 ATOM 5833 O GLY 630 26.937 31.851 23.857 1.00 5.25 ATOM 5835 N THR 631 28.799 30.673 23.264 1.00 5.56 ATOM 5836 CA THR 631 27.996 29.649 22.720 1.00 5.56 ATOM 5837 C THR 631 28.076 28.433 23.576 1.00 5.56 ATOM 5838 O THR 631 29.125 28.150 24.150 1.00 5.56 ATOM 5840 CB THR 631 28.417 29.308 21.278 1.00 5.56 ATOM 5842 OG1 THR 631 29.770 28.835 21.272 1.00 5.56 ATOM 5843 CG2 THR 631 28.328 30.541 20.392 1.00 5.56 ATOM 5844 N PHE 632 26.951 27.705 23.650 1.00 5.20 ATOM 5845 CA PHE 632 26.927 26.551 24.484 1.00 5.20 ATOM 5846 C PHE 632 26.491 25.384 23.647 1.00 5.20 ATOM 5847 O PHE 632 25.382 25.385 23.117 1.00 5.20 ATOM 5849 CB PHE 632 25.996 26.771 25.678 1.00 5.20 ATOM 5850 CG PHE 632 26.411 27.909 26.567 1.00 5.20 ATOM 5851 CZ PHE 632 27.179 30.007 28.219 1.00 5.20 ATOM 5852 CD1 PHE 632 26.435 29.208 26.089 1.00 5.20 ATOM 5853 CE1 PHE 632 26.817 30.253 26.908 1.00 5.20 ATOM 5854 CD2 PHE 632 26.776 27.680 27.882 1.00 5.20 ATOM 5855 CE2 PHE 632 27.158 28.726 28.701 1.00 5.20 ATOM 5856 N SER 633 27.364 24.368 23.527 1.00 5.56 ATOM 5857 CA SER 633 27.033 23.268 22.673 1.00 5.56 ATOM 5858 C SER 633 26.484 22.099 23.450 1.00 5.56 ATOM 5859 O SER 633 26.715 21.995 24.653 1.00 5.56 ATOM 5861 CB SER 633 28.259 22.824 21.873 1.00 5.56 ATOM 5863 OG SER 633 29.264 22.303 22.725 1.00 5.56 ATOM 5864 N THR 634 25.751 21.197 22.771 1.00 6.45 ATOM 5865 CA THR 634 25.259 20.093 23.537 1.00 6.45 ATOM 5866 C THR 634 25.654 18.815 22.924 1.00 6.45 ATOM 5867 O THR 634 25.228 18.508 21.812 1.00 6.45 ATOM 5869 CB THR 634 23.726 20.144 23.681 1.00 6.45 ATOM 5871 OG1 THR 634 23.345 21.367 24.323 1.00 6.45 ATOM 5872 CG2 THR 634 23.232 18.978 24.524 1.00 6.45 ATOM 5873 N THR 635 26.457 18.151 23.729 1.00 5.95 ATOM 5874 CA THR 635 27.220 16.983 23.499 1.00 5.95 ATOM 5875 C THR 635 26.640 15.605 23.724 1.00 5.95 ATOM 5876 O THR 635 27.225 14.612 23.294 1.00 5.95 ATOM 5878 CB THR 635 28.507 16.974 24.347 1.00 5.95 ATOM 5880 OG1 THR 635 28.165 16.984 25.737 1.00 5.95 ATOM 5881 CG2 THR 635 29.353 18.200 24.043 1.00 5.95 ATOM 5882 N LEU 636 25.485 15.469 24.388 1.00 6.06 ATOM 5883 CA LEU 636 25.016 14.532 25.388 1.00 6.06 ATOM 5884 C LEU 636 25.522 13.116 25.573 1.00 6.06 ATOM 5885 O LEU 636 25.903 12.737 26.677 1.00 6.06 ATOM 5887 CB LEU 636 23.508 14.312 25.250 1.00 6.06 ATOM 5888 CG LEU 636 22.615 15.510 25.585 1.00 6.06 ATOM 5889 CD1 LEU 636 21.163 15.206 25.253 1.00 6.06 ATOM 5890 CD2 LEU 636 22.755 15.890 27.052 1.00 6.06 ATOM 5891 N VAL 637 25.628 12.156 24.643 1.00 6.59 ATOM 5892 CA VAL 637 25.799 10.951 25.418 1.00 6.59 ATOM 5893 C VAL 637 27.021 10.134 25.205 1.00 6.59 ATOM 5894 O VAL 637 27.484 10.000 24.075 1.00 6.59 ATOM 5896 CB VAL 637 24.619 9.982 25.222 1.00 6.59 ATOM 5897 CG1 VAL 637 23.326 10.607 25.726 1.00 6.59 ATOM 5898 CG2 VAL 637 24.489 9.589 23.758 1.00 6.59 ATOM 5899 N ASN 638 27.490 9.606 26.354 1.00 6.79 ATOM 5900 CA ASN 638 28.403 8.514 26.421 1.00 6.79 ATOM 5901 C ASN 638 27.484 7.528 26.995 1.00 6.79 ATOM 5902 O ASN 638 27.196 7.574 28.188 1.00 6.79 ATOM 5904 CB ASN 638 29.634 8.896 27.246 1.00 6.79 ATOM 5905 CG ASN 638 30.677 7.796 27.278 1.00 6.79 ATOM 5906 OD1 ASN 638 30.349 6.613 27.193 1.00 6.79 ATOM 5909 ND2 ASN 638 31.941 8.184 27.403 1.00 6.79 ATOM 5910 N ALA 639 27.006 6.606 26.162 1.00 7.00 ATOM 5911 CA ALA 639 25.978 5.727 26.589 1.00 7.00 ATOM 5912 C ALA 639 26.470 4.978 27.765 1.00 7.00 ATOM 5913 O ALA 639 25.695 4.670 28.668 1.00 7.00 ATOM 5915 CB ALA 639 25.573 4.795 25.457 1.00 7.00 ATOM 5916 N GLY 640 27.774 4.670 27.790 1.00 9.00 ATOM 5917 CA GLY 640 28.221 3.890 28.896 1.00 9.00 ATOM 5918 C GLY 640 27.972 4.623 30.179 1.00 9.00 ATOM 5919 O GLY 640 27.382 4.065 31.102 1.00 9.00 ATOM 5921 N THR 641 28.408 5.892 30.269 1.00 7.53 ATOM 5922 CA THR 641 28.224 6.638 31.483 1.00 7.53 ATOM 5923 C THR 641 26.829 7.191 31.656 1.00 7.53 ATOM 5924 O THR 641 26.269 7.120 32.749 1.00 7.53 ATOM 5926 CB THR 641 29.213 7.815 31.577 1.00 7.53 ATOM 5928 OG1 THR 641 29.021 8.694 30.463 1.00 7.53 ATOM 5929 CG2 THR 641 30.647 7.309 31.557 1.00 7.53 ATOM 5930 N GLY 642 26.228 7.749 30.583 1.00 7.69 ATOM 5931 CA GLY 642 24.934 8.387 30.648 1.00 7.69 ATOM 5932 C GLY 642 25.122 9.810 31.075 1.00 7.69 ATOM 5933 O GLY 642 24.160 10.469 31.461 1.00 7.69 ATOM 5935 N GLU 643 26.369 10.316 31.007 1.00 6.63 ATOM 5936 CA GLU 643 26.618 11.650 31.468 1.00 6.63 ATOM 5937 C GLU 643 26.491 12.581 30.328 1.00 6.63 ATOM 5938 O GLU 643 27.025 12.316 29.254 1.00 6.63 ATOM 5940 CB GLU 643 28.002 11.745 32.111 1.00 6.63 ATOM 5941 CD GLU 643 29.530 11.067 34.004 1.00 6.63 ATOM 5942 CG GLU 643 28.153 10.930 33.384 1.00 6.63 ATOM 5943 OE1 GLU 643 30.444 11.567 33.316 1.00 6.63 ATOM 5944 OE2 GLU 643 29.693 10.673 35.178 1.00 6.63 ATOM 5945 N THR 644 25.782 13.684 30.568 1.00 5.15 ATOM 5946 CA THR 644 25.721 14.580 29.489 1.00 5.15 ATOM 5947 C THR 644 26.624 15.687 29.805 1.00 5.15 ATOM 5948 O THR 644 27.172 15.740 30.904 1.00 5.15 ATOM 5950 CB THR 644 24.283 15.072 29.243 1.00 5.15 ATOM 5952 OG1 THR 644 23.836 15.833 30.372 1.00 5.15 ATOM 5953 CG2 THR 644 23.342 13.892 29.049 1.00 5.15 ATOM 5954 N GLN 645 26.762 16.567 28.829 1.00 5.17 ATOM 5955 CA GLN 645 27.680 17.594 29.099 1.00 5.17 ATOM 5956 C GLN 645 27.273 18.761 28.270 1.00 5.17 ATOM 5957 O GLN 645 26.574 18.594 27.273 1.00 5.17 ATOM 5959 CB GLN 645 29.106 17.132 28.794 1.00 5.17 ATOM 5960 CD GLN 645 29.852 16.371 31.085 1.00 5.17 ATOM 5961 CG GLN 645 29.577 15.967 29.650 1.00 5.17 ATOM 5962 OE1 GLN 645 30.201 17.519 31.360 1.00 5.17 ATOM 5965 NE2 GLN 645 29.697 15.425 32.005 1.00 5.17 ATOM 5966 N LEU 646 27.714 19.963 28.673 1.00 5.26 ATOM 5967 CA LEU 646 27.490 21.116 27.860 1.00 5.26 ATOM 5968 C LEU 646 28.785 21.880 27.813 1.00 5.26 ATOM 5969 O LEU 646 29.397 22.117 28.853 1.00 5.26 ATOM 5971 CB LEU 646 26.341 21.954 28.424 1.00 5.26 ATOM 5972 CG LEU 646 24.971 21.277 28.481 1.00 5.26 ATOM 5973 CD1 LEU 646 23.965 22.157 29.208 1.00 5.26 ATOM 5974 CD2 LEU 646 24.474 20.950 27.081 1.00 5.26 ATOM 5975 N VAL 647 29.230 22.290 26.613 1.00 5.21 ATOM 5976 CA VAL 647 30.497 22.968 26.580 1.00 5.21 ATOM 5977 C VAL 647 30.302 24.422 26.260 1.00 5.21 ATOM 5978 O VAL 647 29.637 24.754 25.281 1.00 5.21 ATOM 5980 CB VAL 647 31.455 22.322 25.562 1.00 5.21 ATOM 5981 CG1 VAL 647 32.767 23.090 25.505 1.00 5.21 ATOM 5982 CG2 VAL 647 31.703 20.863 25.914 1.00 5.21 ATOM 5983 N PHE 648 30.892 25.305 27.085 1.00 5.12 ATOM 5984 CA PHE 648 30.721 26.703 26.834 1.00 5.12 ATOM 5985 C PHE 648 31.964 27.260 26.221 1.00 5.12 ATOM 5986 O PHE 648 33.036 27.176 26.816 1.00 5.12 ATOM 5988 CB PHE 648 30.373 27.442 28.128 1.00 5.12 ATOM 5989 CG PHE 648 30.156 28.916 27.945 1.00 5.12 ATOM 5990 CZ PHE 648 29.755 31.647 27.611 1.00 5.12 ATOM 5991 CD1 PHE 648 29.826 29.433 26.703 1.00 5.12 ATOM 5992 CE1 PHE 648 29.625 30.790 26.535 1.00 5.12 ATOM 5993 CD2 PHE 648 30.282 29.788 29.012 1.00 5.12 ATOM 5994 CE2 PHE 648 30.082 31.144 28.844 1.00 5.12 ATOM 5995 N THR 649 31.822 27.845 25.016 1.00 4.99 ATOM 5996 CA THR 649 32.962 28.415 24.360 1.00 4.99 ATOM 5997 C THR 649 32.777 29.891 24.381 1.00 4.99 ATOM 5998 O THR 649 31.793 30.396 23.844 1.00 4.99 ATOM 6000 CB THR 649 33.114 27.880 22.924 1.00 4.99 ATOM 6002 OG1 THR 649 33.292 26.458 22.958 1.00 4.99 ATOM 6003 CG2 THR 649 34.324 28.506 22.247 1.00 4.99 ATOM 6004 N ARG 650 33.732 30.601 25.001 1.00 5.34 ATOM 6005 CA ARG 650 33.527 32.000 25.214 1.00 5.34 ATOM 6006 C ARG 650 33.281 32.788 23.960 1.00 5.34 ATOM 6007 O ARG 650 32.186 32.737 23.406 1.00 5.34 ATOM 6009 CB ARG 650 34.727 32.612 25.938 1.00 5.34 ATOM 6010 CD ARG 650 35.765 34.616 27.038 1.00 5.34 ATOM 6012 NE ARG 650 35.611 36.024 27.394 1.00 5.34 ATOM 6013 CG ARG 650 34.565 34.088 26.269 1.00 5.34 ATOM 6014 CZ ARG 650 35.945 37.037 26.601 1.00 5.34 ATOM 6017 NH1 ARG 650 35.768 38.286 27.010 1.00 5.34 ATOM 6020 NH2 ARG 650 36.457 36.798 25.402 1.00 5.34 ATOM 6021 N ASP 651 34.271 33.536 23.460 1.00 5.22 ATOM 6022 CA ASP 651 33.940 34.143 22.211 1.00 5.22 ATOM 6023 C ASP 651 34.901 33.830 21.121 1.00 5.22 ATOM 6024 O ASP 651 34.513 33.273 20.097 1.00 5.22 ATOM 6026 CB ASP 651 33.849 35.663 22.362 1.00 5.22 ATOM 6027 CG ASP 651 32.659 36.095 23.198 1.00 5.22 ATOM 6028 OD1 ASP 651 31.559 35.539 22.997 1.00 5.22 ATOM 6029 OD2 ASP 651 32.829 36.987 24.054 1.00 5.22 ATOM 6030 N SER 652 36.161 34.207 21.397 1.00 6.60 ATOM 6031 CA SER 652 37.124 34.249 20.343 1.00 6.60 ATOM 6032 C SER 652 38.248 35.087 20.833 1.00 6.60 ATOM 6033 O SER 652 39.323 34.567 21.123 1.00 6.60 ATOM 6035 CB SER 652 36.495 34.803 19.063 1.00 6.60 ATOM 6037 OG SER 652 36.122 36.161 19.225 1.00 6.60 ATOM 6038 N ALA 653 37.986 36.412 20.932 1.00 6.15 ATOM 6039 CA ALA 653 38.983 37.311 21.427 1.00 6.15 ATOM 6040 C ALA 653 39.365 36.727 22.730 1.00 6.15 ATOM 6041 O ALA 653 38.501 36.436 23.553 1.00 6.15 ATOM 6043 CB ALA 653 38.424 38.722 21.521 1.00 6.15 ATOM 6044 N GLY 654 40.679 36.557 22.929 1.00 5.32 ATOM 6045 CA GLY 654 41.123 35.873 24.099 1.00 5.32 ATOM 6046 C GLY 654 40.984 36.794 25.244 1.00 5.32 ATOM 6047 O GLY 654 41.953 37.442 25.634 1.00 5.32 ATOM 6049 N SER 655 39.763 36.839 25.784 1.00 5.29 ATOM 6050 CA SER 655 39.530 37.620 26.943 1.00 5.29 ATOM 6051 C SER 655 39.174 36.645 28.004 1.00 5.29 ATOM 6052 O SER 655 38.607 35.594 27.710 1.00 5.29 ATOM 6054 CB SER 655 38.433 38.654 26.682 1.00 5.29 ATOM 6056 OG SER 655 38.827 39.573 25.678 1.00 5.29 ATOM 6057 N ALA 656 39.501 36.992 29.259 1.00 5.28 ATOM 6058 CA ALA 656 39.177 36.140 30.365 1.00 5.28 ATOM 6059 C ALA 656 37.982 36.760 31.031 1.00 5.28 ATOM 6060 O ALA 656 37.999 37.947 31.346 1.00 5.28 ATOM 6062 CB ALA 656 40.370 36.008 31.300 1.00 5.28 ATOM 6063 N VAL 657 36.937 35.936 31.247 1.00 5.63 ATOM 6064 CA VAL 657 35.644 36.231 31.805 1.00 5.63 ATOM 6065 C VAL 657 35.517 36.326 33.298 1.00 5.63 ATOM 6066 O VAL 657 34.716 37.112 33.800 1.00 5.63 ATOM 6068 CB VAL 657 34.589 35.201 31.361 1.00 5.63 ATOM 6069 CG1 VAL 657 34.454 35.193 29.847 1.00 5.63 ATOM 6070 CG2 VAL 657 34.950 33.815 31.875 1.00 5.63 ATOM 6071 N SER 658 36.300 35.542 34.059 1.00 4.95 ATOM 6072 CA SER 658 36.232 35.513 35.492 1.00 4.95 ATOM 6073 C SER 658 34.826 35.405 35.963 1.00 4.95 ATOM 6074 O SER 658 34.253 36.390 36.422 1.00 4.95 ATOM 6076 CB SER 658 36.889 36.761 36.084 1.00 4.95 ATOM 6078 OG SER 658 38.262 36.827 35.742 1.00 4.95 ATOM 6079 N VAL 659 34.275 34.192 35.850 1.00 4.86 ATOM 6080 CA VAL 659 32.996 33.874 36.373 1.00 4.86 ATOM 6081 C VAL 659 33.232 33.775 37.838 1.00 4.86 ATOM 6082 O VAL 659 34.361 33.546 38.267 1.00 4.86 ATOM 6084 CB VAL 659 32.433 32.585 35.745 1.00 4.86 ATOM 6085 CG1 VAL 659 32.278 32.749 34.241 1.00 4.86 ATOM 6086 CG2 VAL 659 33.331 31.400 36.066 1.00 4.86 ATOM 6087 N SER 660 32.163 33.940 38.640 1.00 5.88 ATOM 6088 CA SER 660 32.262 33.846 40.065 1.00 5.88 ATOM 6089 C SER 660 31.435 32.668 40.453 1.00 5.88 ATOM 6090 O SER 660 30.552 32.261 39.701 1.00 5.88 ATOM 6092 CB SER 660 31.792 35.146 40.722 1.00 5.88 ATOM 6094 OG SER 660 30.415 35.373 40.476 1.00 5.88 ATOM 6095 N THR 661 31.713 32.109 41.647 1.00 6.61 ATOM 6096 CA THR 661 31.142 30.876 42.109 1.00 6.61 ATOM 6097 C THR 661 29.675 30.996 42.003 1.00 6.61 ATOM 6098 O THR 661 29.017 30.085 41.508 1.00 6.61 ATOM 6100 CB THR 661 31.574 30.559 43.553 1.00 6.61 ATOM 6102 OG1 THR 661 32.999 30.413 43.607 1.00 6.61 ATOM 6103 CG2 THR 661 30.934 29.264 44.029 1.00 6.61 ATOM 6104 N THR 662 29.187 32.138 42.471 1.00 6.37 ATOM 6105 CA THR 662 27.805 32.443 42.541 1.00 6.37 ATOM 6106 C THR 662 27.204 32.637 41.191 1.00 6.37 ATOM 6107 O THR 662 25.995 32.496 41.029 1.00 6.37 ATOM 6109 CB THR 662 27.547 33.704 43.385 1.00 6.37 ATOM 6111 OG1 THR 662 28.224 34.822 42.800 1.00 6.37 ATOM 6112 CG2 THR 662 28.063 33.510 44.803 1.00 6.37 ATOM 6113 N ALA 663 28.039 32.959 40.182 1.00 4.88 ATOM 6114 CA ALA 663 27.600 33.327 38.866 1.00 4.88 ATOM 6115 C ALA 663 26.555 32.383 38.403 1.00 4.88 ATOM 6116 O ALA 663 26.682 31.177 38.602 1.00 4.88 ATOM 6118 CB ALA 663 28.776 33.348 37.902 1.00 4.88 ATOM 6119 N THR 664 25.513 32.957 37.771 1.00 4.76 ATOM 6120 CA THR 664 24.399 32.190 37.329 1.00 4.76 ATOM 6121 C THR 664 24.354 32.231 35.843 1.00 4.76 ATOM 6122 O THR 664 24.549 33.290 35.251 1.00 4.76 ATOM 6124 CB THR 664 23.081 32.713 37.931 1.00 4.76 ATOM 6126 OG1 THR 664 23.134 32.619 39.359 1.00 4.76 ATOM 6127 CG2 THR 664 21.904 31.887 37.433 1.00 4.76 ATOM 6128 N PHE 665 24.086 31.057 35.235 1.00 5.09 ATOM 6129 CA PHE 665 23.976 31.011 33.816 1.00 5.09 ATOM 6130 C PHE 665 22.518 30.752 33.575 1.00 5.09 ATOM 6131 O PHE 665 21.946 29.844 34.173 1.00 5.09 ATOM 6133 CB PHE 665 24.899 29.935 33.242 1.00 5.09 ATOM 6134 CG PHE 665 26.361 30.223 33.434 1.00 5.09 ATOM 6135 CZ PHE 665 29.066 30.752 33.790 1.00 5.09 ATOM 6136 CD1 PHE 665 26.786 31.476 33.842 1.00 5.09 ATOM 6137 CE1 PHE 665 28.130 31.742 34.020 1.00 5.09 ATOM 6138 CD2 PHE 665 27.310 29.243 33.208 1.00 5.09 ATOM 6139 CE2 PHE 665 28.655 29.509 33.387 1.00 5.09 ATOM 6140 N ALA 666 21.927 31.562 32.682 1.00 5.35 ATOM 6141 CA ALA 666 20.530 31.670 32.342 1.00 5.35 ATOM 6142 C ALA 666 19.847 30.592 31.541 1.00 5.35 ATOM 6143 O ALA 666 18.693 30.264 31.809 1.00 5.35 ATOM 6145 CB ALA 666 20.270 32.952 31.565 1.00 5.35 ATOM 6146 N MET 667 20.527 30.001 30.546 1.00 5.47 ATOM 6147 CA MET 667 19.969 29.065 29.603 1.00 5.47 ATOM 6148 C MET 667 18.784 29.686 28.890 1.00 5.47 ATOM 6149 O MET 667 17.707 29.802 29.470 1.00 5.47 ATOM 6151 CB MET 667 19.554 27.774 30.312 1.00 5.47 ATOM 6152 SD MET 667 22.014 26.521 30.079 1.00 5.47 ATOM 6153 CE MET 667 23.336 26.393 31.280 1.00 5.47 ATOM 6154 CG MET 667 20.667 27.122 31.116 1.00 5.47 ATOM 6155 N ARG 668 18.992 30.081 27.607 1.00 6.13 ATOM 6156 CA ARG 668 18.026 30.764 26.774 1.00 6.13 ATOM 6157 C ARG 668 16.915 29.856 26.404 1.00 6.13 ATOM 6158 O ARG 668 17.051 28.639 26.511 1.00 6.13 ATOM 6160 CB ARG 668 18.699 31.317 25.516 1.00 6.13 ATOM 6161 CD ARG 668 19.877 30.864 23.346 1.00 6.13 ATOM 6163 NE ARG 668 20.328 29.850 22.396 1.00 6.13 ATOM 6164 CG ARG 668 19.186 30.248 24.551 1.00 6.13 ATOM 6165 CZ ARG 668 20.973 30.120 21.265 1.00 6.13 ATOM 6168 NH1 ARG 668 21.344 29.133 20.462 1.00 6.13 ATOM 6171 NH2 ARG 668 21.245 31.377 20.941 1.00 6.13 TER END