####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 563), selected 80 , name T1052TS324_1-D3 # Molecule2: number of CA atoms 80 ( 563), selected 80 , name T1052-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS324_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 2.15 2.15 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 56 613 - 668 1.91 2.21 LCS_AVERAGE: 57.09 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 640 - 659 0.94 2.63 LCS_AVERAGE: 17.14 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 589 T 589 9 22 80 9 23 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 590 R 590 9 22 80 9 25 46 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT Q 591 Q 591 9 22 80 9 23 43 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT Y 592 Y 592 9 22 80 9 25 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 593 A 593 9 22 80 9 25 44 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 594 P 594 9 22 80 9 24 46 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 595 V 595 9 22 80 9 24 46 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 596 G 596 9 22 80 3 17 43 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 597 G 597 11 22 80 6 19 40 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 598 S 598 11 22 80 4 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 599 I 599 11 22 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 600 P 600 11 22 80 9 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 601 A 601 11 22 80 3 20 46 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 602 S 602 11 22 80 6 31 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 603 G 603 11 22 80 5 19 44 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 604 S 604 11 22 80 9 31 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 605 V 605 11 22 80 9 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 606 A 606 11 22 80 11 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 607 L 607 11 22 80 10 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 608 T 608 10 22 80 9 25 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 609 P 609 9 22 80 3 5 24 48 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 610 T 610 4 22 80 3 5 6 6 25 49 62 73 75 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT E 611 E 611 4 9 80 3 5 6 6 40 50 66 73 75 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 612 V 612 4 25 80 3 4 4 13 44 58 68 73 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 613 G 613 4 56 80 3 4 19 39 49 62 70 73 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 614 I 614 4 56 80 3 10 37 51 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 615 F 615 4 56 80 3 4 4 25 62 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT W 616 W 616 4 56 80 3 23 43 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT N 617 N 617 6 56 80 3 4 14 47 67 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 618 G 618 17 56 80 9 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 619 A 619 17 56 80 5 18 42 61 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 620 T 620 17 56 80 7 25 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 621 G 621 17 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT K 622 K 622 17 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT C 623 C 623 17 56 80 8 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 624 I 624 17 56 80 6 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 625 F 625 17 56 80 6 21 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 626 G 626 17 56 80 3 11 33 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 627 G 627 17 56 80 3 21 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 628 I 628 17 56 80 8 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT D 629 D 629 17 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 630 G 630 17 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 631 T 631 17 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 632 F 632 17 56 80 11 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 633 S 633 17 56 80 8 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 634 T 634 17 56 80 6 22 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 635 T 635 17 56 80 6 20 43 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 636 L 636 17 56 80 6 22 43 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 637 V 637 13 56 80 5 11 33 46 63 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT N 638 N 638 13 56 80 5 17 41 60 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 639 A 639 17 56 80 5 11 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 640 G 640 20 56 80 8 23 44 59 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 641 T 641 20 56 80 5 16 39 56 66 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 642 G 642 20 56 80 5 19 40 56 66 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT E 643 E 643 20 56 80 5 22 41 59 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 644 T 644 20 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT Q 645 Q 645 20 56 80 10 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 646 L 646 20 56 80 10 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 647 V 647 20 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 648 F 648 20 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 649 T 649 20 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 650 R 650 20 56 80 10 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT D 651 D 651 20 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 652 S 652 20 56 80 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 653 A 653 20 56 80 10 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 654 G 654 20 56 80 10 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 655 S 655 20 56 80 8 30 46 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 656 A 656 20 56 80 10 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 657 V 657 20 56 80 9 30 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 658 S 658 20 56 80 10 22 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 659 V 659 20 56 80 3 19 35 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 660 S 660 18 56 80 3 4 28 44 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 661 T 661 18 56 80 2 6 46 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 662 T 662 7 56 80 7 25 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 663 A 663 7 56 80 6 29 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 664 T 664 7 56 80 4 21 43 61 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 665 F 665 7 56 80 9 29 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 666 A 666 7 56 80 5 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT M 667 M 667 7 56 80 8 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 668 R 668 7 56 80 7 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 LCS_AVERAGE LCS_A: 58.08 ( 17.14 57.09 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 32 47 63 68 72 76 76 76 79 80 80 80 80 80 80 80 80 80 80 GDT PERCENT_AT 15.00 40.00 58.75 78.75 85.00 90.00 95.00 95.00 95.00 98.75 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.36 0.71 1.05 1.35 1.45 1.58 1.72 1.72 1.72 2.11 2.15 2.15 2.15 2.15 2.15 2.15 2.15 2.15 2.15 2.15 GDT RMS_ALL_AT 2.72 2.43 2.23 2.16 2.20 2.20 2.20 2.20 2.20 2.16 2.15 2.15 2.15 2.15 2.15 2.15 2.15 2.15 2.15 2.15 # Checking swapping # possible swapping detected: Y 592 Y 592 # possible swapping detected: F 615 F 615 # possible swapping detected: F 632 F 632 # possible swapping detected: F 665 F 665 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA T 589 T 589 1.074 0 0.169 1.187 2.818 61.818 51.948 2.818 LGA R 590 R 590 1.165 0 0.073 1.394 6.991 65.455 44.132 6.991 LGA Q 591 Q 591 1.517 0 0.047 1.078 4.427 61.818 42.626 2.465 LGA Y 592 Y 592 0.909 0 0.070 0.238 1.879 69.545 69.848 1.879 LGA A 593 A 593 1.653 0 0.087 0.129 2.081 61.818 57.091 - LGA P 594 P 594 1.677 0 0.043 0.407 2.281 47.727 47.273 1.831 LGA V 595 V 595 1.754 0 0.629 1.494 4.867 32.727 34.545 3.281 LGA G 596 G 596 2.178 0 0.700 0.700 3.523 38.182 38.182 - LGA G 597 G 597 1.946 0 0.172 0.172 2.173 51.364 51.364 - LGA S 598 S 598 1.397 0 0.048 0.519 1.732 65.455 63.030 1.732 LGA I 599 I 599 1.251 0 0.082 0.654 3.986 65.909 57.045 3.986 LGA P 600 P 600 0.982 0 0.078 0.454 2.733 69.545 60.779 2.733 LGA A 601 A 601 1.771 0 0.057 0.057 2.220 51.364 48.727 - LGA S 602 S 602 1.512 0 0.698 0.641 3.345 50.000 57.879 0.733 LGA G 603 G 603 2.024 0 0.051 0.051 2.024 55.000 55.000 - LGA S 604 S 604 1.180 0 0.067 0.097 1.591 58.182 63.333 1.068 LGA V 605 V 605 0.737 0 0.074 1.074 2.712 81.818 69.610 2.712 LGA A 606 A 606 0.742 0 0.103 0.131 1.016 77.727 78.545 - LGA L 607 L 607 0.264 0 0.048 0.135 1.437 95.455 82.500 1.437 LGA T 608 T 608 0.889 0 0.095 1.035 3.057 70.000 61.558 1.936 LGA P 609 P 609 2.951 0 0.063 0.064 4.518 30.000 18.961 4.487 LGA T 610 T 610 6.762 0 0.107 1.138 11.137 0.000 0.000 8.731 LGA E 611 E 611 6.706 0 0.427 0.459 8.806 0.000 0.000 7.818 LGA V 612 V 612 6.088 0 0.023 0.092 6.797 1.364 0.779 6.797 LGA G 613 G 613 5.881 0 0.078 0.078 6.191 4.091 4.091 - LGA I 614 I 614 3.100 0 0.456 1.694 7.478 29.545 16.136 7.478 LGA F 615 F 615 3.164 0 0.088 1.247 12.155 18.636 6.777 12.155 LGA W 616 W 616 2.079 0 0.097 1.011 12.083 51.364 16.753 12.083 LGA N 617 N 617 3.081 0 0.082 0.829 7.112 28.636 14.545 6.758 LGA G 618 G 618 1.158 0 0.611 0.611 1.158 73.636 73.636 - LGA A 619 A 619 1.966 0 0.082 0.094 2.911 61.818 54.909 - LGA T 620 T 620 1.262 0 0.026 0.171 2.482 61.818 53.506 2.120 LGA G 621 G 621 1.543 0 0.208 0.208 2.194 51.364 51.364 - LGA K 622 K 622 1.297 0 0.050 0.767 3.779 65.455 51.919 3.779 LGA C 623 C 623 1.205 0 0.065 0.600 3.895 65.455 56.364 3.895 LGA I 624 I 624 1.099 0 0.089 0.977 2.333 65.455 56.818 2.221 LGA F 625 F 625 1.469 0 0.354 0.271 2.419 51.364 68.264 0.294 LGA G 626 G 626 2.151 0 0.086 0.086 2.269 44.545 44.545 - LGA G 627 G 627 1.763 0 0.049 0.049 2.302 51.364 51.364 - LGA I 628 I 628 0.986 0 0.091 1.336 3.773 69.545 55.000 3.773 LGA D 629 D 629 1.110 0 0.067 0.225 1.603 61.818 63.864 0.924 LGA G 630 G 630 1.214 0 0.100 0.100 1.501 61.818 61.818 - LGA T 631 T 631 0.794 0 0.120 1.034 2.378 81.818 69.351 2.378 LGA F 632 F 632 1.196 0 0.105 1.081 8.430 61.818 29.917 8.430 LGA S 633 S 633 0.681 0 0.211 0.629 1.973 86.364 79.697 1.973 LGA T 634 T 634 1.594 0 0.044 0.965 4.124 51.364 44.935 4.124 LGA T 635 T 635 2.024 0 0.090 1.060 3.548 51.364 40.260 3.548 LGA L 636 L 636 2.222 0 0.066 0.075 3.915 28.636 27.727 1.989 LGA V 637 V 637 3.322 0 0.070 0.181 4.988 19.091 16.364 4.988 LGA N 638 N 638 2.263 0 0.248 1.052 4.980 51.818 31.591 4.980 LGA A 639 A 639 1.788 0 0.146 0.154 2.688 48.636 44.364 - LGA G 640 G 640 2.318 0 0.069 0.069 4.493 31.818 31.818 - LGA T 641 T 641 3.571 0 0.743 0.618 4.592 14.545 11.429 4.009 LGA G 642 G 642 3.313 0 0.168 0.168 3.417 20.455 20.455 - LGA E 643 E 643 2.475 0 0.071 0.568 6.844 52.273 26.667 6.844 LGA T 644 T 644 0.739 0 0.112 0.897 2.403 74.091 62.338 2.403 LGA Q 645 Q 645 0.661 0 0.093 1.223 4.070 86.364 59.596 2.302 LGA L 646 L 646 0.860 0 0.035 0.227 1.299 86.364 77.955 1.021 LGA V 647 V 647 0.882 0 0.066 0.078 1.239 73.636 74.805 1.102 LGA F 648 F 648 1.171 0 0.087 0.295 1.735 65.909 57.686 1.486 LGA T 649 T 649 0.844 0 0.173 0.196 0.986 81.818 81.818 0.764 LGA R 650 R 650 0.925 0 0.050 1.227 2.698 81.818 71.240 2.698 LGA D 651 D 651 0.152 0 0.272 0.286 1.703 87.727 76.818 1.627 LGA S 652 S 652 0.207 0 0.132 0.192 2.881 68.636 58.788 2.881 LGA A 653 A 653 1.303 0 0.405 0.445 2.825 56.364 55.273 - LGA G 654 G 654 1.438 0 0.126 0.126 1.997 58.182 58.182 - LGA S 655 S 655 2.006 0 0.048 0.691 3.047 55.000 44.242 3.047 LGA A 656 A 656 1.079 0 0.061 0.061 1.211 65.455 65.455 - LGA V 657 V 657 1.310 0 0.085 0.113 1.599 65.455 61.299 1.599 LGA S 658 S 658 1.385 0 0.072 0.539 1.556 61.818 65.758 0.744 LGA V 659 V 659 2.135 0 0.110 0.151 2.730 41.364 36.883 2.730 LGA S 660 S 660 3.088 0 0.552 0.530 5.015 15.909 12.727 4.552 LGA T 661 T 661 1.626 0 0.281 1.139 4.620 62.273 40.519 4.620 LGA T 662 T 662 1.469 0 0.165 1.021 2.985 69.545 52.987 2.554 LGA A 663 A 663 1.076 0 0.684 0.650 2.466 58.636 60.000 - LGA T 664 T 664 1.963 0 0.236 1.100 3.780 39.545 41.299 0.766 LGA F 665 F 665 1.073 0 0.062 0.147 1.393 69.545 66.942 1.086 LGA A 666 A 666 1.354 0 0.166 0.204 1.645 61.818 62.545 - LGA M 667 M 667 1.306 0 0.031 0.581 1.575 69.545 71.818 0.535 LGA R 668 R 668 0.976 0 0.178 0.360 2.160 69.545 63.306 1.930 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 80 320 320 100.00 563 563 100.00 80 59 SUMMARY(RMSD_GDC): 2.153 2.190 3.067 55.080 48.891 33.498 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 76 1.72 78.438 77.525 4.168 LGA_LOCAL RMSD: 1.723 Number of atoms: 76 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.202 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 2.153 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.799508 * X + -0.564843 * Y + -0.204305 * Z + 14.359416 Y_new = 0.544475 * X + -0.825148 * Y + 0.150594 * Z + 23.786976 Z_new = -0.253644 * X + 0.009162 * Y + 0.967254 * Z + 42.081120 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.543724 0.256445 0.009472 [DEG: 145.7447 14.6932 0.5427 ] ZXZ: -2.205991 0.256616 -1.534691 [DEG: -126.3940 14.7030 -87.9313 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1052TS324_1-D3 REMARK 2: T1052-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS324_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 76 1.72 77.525 2.15 REMARK ---------------------------------------------------------- MOLECULE T1052TS324_1-D3 PFRMAT TS TARGET T1052 MODEL 1 PARENT 6f7d_A 6fb3_A 5gkd_A ATOM 8688 N THR 589 16.105 31.097 32.462 1.00 1.43 ATOM 8689 CA THR 589 17.285 31.537 33.171 1.00 1.43 ATOM 8690 C THR 589 17.608 30.420 34.124 1.00 1.43 ATOM 8691 O THR 589 16.751 29.990 34.895 1.00 1.43 ATOM 8692 CB THR 589 17.058 32.847 33.921 1.00 1.43 ATOM 8693 OG1 THR 589 16.853 33.896 32.982 1.00 1.43 ATOM 8694 CG2 THR 589 18.245 33.233 34.833 1.00 1.43 ATOM 8702 N ARG 590 18.835 29.904 34.046 1.00 1.24 ATOM 8703 CA ARG 590 19.245 28.716 34.757 1.00 1.24 ATOM 8704 C ARG 590 20.486 29.035 35.535 1.00 1.24 ATOM 8705 O ARG 590 20.978 30.161 35.503 1.00 1.24 ATOM 8706 CB ARG 590 19.446 27.533 33.782 1.00 1.24 ATOM 8707 CG ARG 590 18.134 27.165 33.060 1.00 1.24 ATOM 8708 CD ARG 590 18.144 25.844 32.271 1.00 1.24 ATOM 8709 NE ARG 590 19.365 25.736 31.413 1.00 1.24 ATOM 8710 CZ ARG 590 19.650 26.537 30.361 1.00 1.24 ATOM 8711 NH1 ARG 590 18.823 27.511 29.938 1.00 1.24 ATOM 8712 NH2 ARG 590 20.823 26.344 29.723 1.00 1.24 ATOM 8726 N GLN 591 20.975 28.062 36.300 1.00 1.05 ATOM 8727 CA GLN 591 22.142 28.211 37.129 1.00 1.05 ATOM 8728 C GLN 591 23.131 27.195 36.642 1.00 1.05 ATOM 8729 O GLN 591 22.781 26.043 36.394 1.00 1.05 ATOM 8730 CB GLN 591 21.790 27.912 38.611 1.00 1.05 ATOM 8731 CG GLN 591 20.695 28.812 39.222 1.00 1.05 ATOM 8732 CD GLN 591 21.019 30.294 39.001 1.00 1.05 ATOM 8733 OE1 GLN 591 22.138 30.735 39.281 1.00 1.05 ATOM 8734 NE2 GLN 591 20.018 31.074 38.495 1.00 1.05 ATOM 8743 N TYR 592 24.384 27.616 36.480 1.00 0.80 ATOM 8744 CA TYR 592 25.459 26.762 36.041 1.00 0.80 ATOM 8745 C TYR 592 26.656 27.083 36.868 1.00 0.80 ATOM 8746 O TYR 592 26.878 28.236 37.238 1.00 0.80 ATOM 8747 CB TYR 592 25.789 26.981 34.539 1.00 0.80 ATOM 8748 CG TYR 592 24.862 26.183 33.667 1.00 0.80 ATOM 8749 CD1 TYR 592 23.578 26.662 33.368 1.00 0.80 ATOM 8750 CD2 TYR 592 25.257 24.938 33.146 1.00 0.80 ATOM 8751 CE1 TYR 592 22.689 25.896 32.613 1.00 0.80 ATOM 8752 CE2 TYR 592 24.372 24.173 32.377 1.00 0.80 ATOM 8753 CZ TYR 592 23.076 24.646 32.120 1.00 0.80 ATOM 8754 OH TYR 592 22.167 23.878 31.358 1.00 0.80 ATOM 8764 N ALA 593 27.431 26.048 37.188 1.00 0.85 ATOM 8765 CA ALA 593 28.603 26.149 38.009 1.00 0.85 ATOM 8766 C ALA 593 29.772 25.741 37.152 1.00 0.85 ATOM 8767 O ALA 593 29.840 24.575 36.761 1.00 0.85 ATOM 8768 CB ALA 593 28.538 25.212 39.232 1.00 0.85 ATOM 8774 N PRO 594 30.718 26.634 36.815 1.00 0.93 ATOM 8775 CA PRO 594 32.033 26.281 36.297 1.00 0.93 ATOM 8776 C PRO 594 32.758 25.260 37.144 1.00 0.93 ATOM 8777 O PRO 594 32.648 25.323 38.368 1.00 0.93 ATOM 8778 CB PRO 594 32.797 27.613 36.256 1.00 0.93 ATOM 8779 CG PRO 594 31.704 28.675 36.148 1.00 0.93 ATOM 8780 CD PRO 594 30.582 28.082 36.992 1.00 0.93 ATOM 8788 N VAL 595 33.496 24.336 36.520 1.00 1.16 ATOM 8789 CA VAL 595 34.357 23.381 37.198 1.00 1.16 ATOM 8790 C VAL 595 35.447 24.100 37.971 1.00 1.16 ATOM 8791 O VAL 595 35.720 23.777 39.127 1.00 1.16 ATOM 8792 CB VAL 595 34.930 22.349 36.227 1.00 1.16 ATOM 8793 CG1 VAL 595 36.013 21.466 36.886 1.00 1.16 ATOM 8794 CG2 VAL 595 33.762 21.476 35.714 1.00 1.16 ATOM 8804 N GLY 596 36.036 25.125 37.353 1.00 1.27 ATOM 8805 CA GLY 596 36.891 26.085 38.008 1.00 1.27 ATOM 8806 C GLY 596 36.393 27.406 37.521 1.00 1.27 ATOM 8807 O GLY 596 35.947 27.511 36.380 1.00 1.27 ATOM 8811 N GLY 597 36.454 28.432 38.374 1.00 1.17 ATOM 8812 CA GLY 597 35.809 29.715 38.160 1.00 1.17 ATOM 8813 C GLY 597 36.293 30.478 36.960 1.00 1.17 ATOM 8814 O GLY 597 35.499 31.119 36.279 1.00 1.17 ATOM 8818 N SER 598 37.597 30.435 36.677 1.00 0.97 ATOM 8819 CA SER 598 38.187 31.080 35.520 1.00 0.97 ATOM 8820 C SER 598 37.687 30.485 34.226 1.00 0.97 ATOM 8821 O SER 598 37.588 29.267 34.091 1.00 0.97 ATOM 8822 CB SER 598 39.736 31.002 35.595 1.00 0.97 ATOM 8823 OG SER 598 40.373 31.722 34.542 1.00 0.97 ATOM 8829 N ILE 599 37.371 31.350 33.263 1.00 0.76 ATOM 8830 CA ILE 599 36.814 30.969 31.990 1.00 0.76 ATOM 8831 C ILE 599 37.800 31.465 30.943 1.00 0.76 ATOM 8832 O ILE 599 37.836 32.669 30.693 1.00 0.76 ATOM 8833 CB ILE 599 35.447 31.616 31.779 1.00 0.76 ATOM 8834 CG1 ILE 599 34.446 31.297 32.924 1.00 0.76 ATOM 8835 CG2 ILE 599 34.885 31.177 30.420 1.00 0.76 ATOM 8836 CD1 ILE 599 34.143 29.810 33.136 1.00 0.76 ATOM 8848 N PRO 600 38.613 30.600 30.306 1.00 1.08 ATOM 8849 CA PRO 600 39.527 30.937 29.219 1.00 1.08 ATOM 8850 C PRO 600 38.979 31.735 28.063 1.00 1.08 ATOM 8851 O PRO 600 37.800 31.604 27.741 1.00 1.08 ATOM 8852 CB PRO 600 40.045 29.576 28.749 1.00 1.08 ATOM 8853 CG PRO 600 40.157 28.789 30.054 1.00 1.08 ATOM 8854 CD PRO 600 38.941 29.279 30.848 1.00 1.08 ATOM 8862 N ALA 601 39.845 32.549 27.452 1.00 1.27 ATOM 8863 CA ALA 601 39.575 33.424 26.334 1.00 1.27 ATOM 8864 C ALA 601 39.123 32.731 25.070 1.00 1.27 ATOM 8865 O ALA 601 38.201 33.199 24.409 1.00 1.27 ATOM 8866 CB ALA 601 40.835 34.235 25.980 1.00 1.27 ATOM 8872 N SER 602 39.773 31.622 24.713 1.00 1.27 ATOM 8873 CA SER 602 39.538 30.955 23.446 1.00 1.27 ATOM 8874 C SER 602 39.274 29.482 23.638 1.00 1.27 ATOM 8875 O SER 602 39.083 28.755 22.665 1.00 1.27 ATOM 8876 CB SER 602 40.762 31.156 22.509 1.00 1.27 ATOM 8877 OG SER 602 41.977 30.696 23.095 1.00 1.27 ATOM 8883 N GLY 603 39.253 29.022 24.891 1.00 1.22 ATOM 8884 CA GLY 603 39.057 27.627 25.218 1.00 1.22 ATOM 8885 C GLY 603 37.606 27.306 25.405 1.00 1.22 ATOM 8886 O GLY 603 36.725 28.138 25.184 1.00 1.22 ATOM 8890 N SER 604 37.349 26.071 25.838 1.00 0.94 ATOM 8891 CA SER 604 36.027 25.560 26.102 1.00 0.94 ATOM 8892 C SER 604 36.010 25.049 27.514 1.00 0.94 ATOM 8893 O SER 604 36.989 24.468 27.978 1.00 0.94 ATOM 8894 CB SER 604 35.684 24.406 25.128 1.00 0.94 ATOM 8895 OG SER 604 35.628 24.877 23.787 1.00 0.94 ATOM 8901 N VAL 605 34.910 25.298 28.232 1.00 0.75 ATOM 8902 CA VAL 605 34.807 25.020 29.650 1.00 0.75 ATOM 8903 C VAL 605 33.568 24.192 29.852 1.00 0.75 ATOM 8904 O VAL 605 32.473 24.594 29.468 1.00 0.75 ATOM 8905 CB VAL 605 34.695 26.288 30.500 1.00 0.75 ATOM 8906 CG1 VAL 605 34.736 25.938 32.004 1.00 0.75 ATOM 8907 CG2 VAL 605 35.848 27.239 30.135 1.00 0.75 ATOM 8917 N ALA 606 33.719 23.019 30.475 1.00 0.73 ATOM 8918 CA ALA 606 32.609 22.211 30.931 1.00 0.73 ATOM 8919 C ALA 606 31.943 22.873 32.114 1.00 0.73 ATOM 8920 O ALA 606 32.611 23.286 33.061 1.00 0.73 ATOM 8921 CB ALA 606 33.036 20.787 31.333 1.00 0.73 ATOM 8927 N LEU 607 30.618 22.994 32.062 1.00 0.82 ATOM 8928 CA LEU 607 29.826 23.633 33.082 1.00 0.82 ATOM 8929 C LEU 607 28.862 22.611 33.602 1.00 0.82 ATOM 8930 O LEU 607 28.297 21.826 32.839 1.00 0.82 ATOM 8931 CB LEU 607 29.030 24.821 32.500 1.00 0.82 ATOM 8932 CG LEU 607 29.886 25.918 31.825 1.00 0.82 ATOM 8933 CD1 LEU 607 28.966 27.010 31.269 1.00 0.82 ATOM 8934 CD2 LEU 607 30.938 26.535 32.763 1.00 0.82 ATOM 8946 N THR 608 28.674 22.598 34.921 1.00 1.15 ATOM 8947 CA THR 608 27.847 21.639 35.614 1.00 1.15 ATOM 8948 C THR 608 26.456 22.233 35.692 1.00 1.15 ATOM 8949 O THR 608 26.335 23.376 36.135 1.00 1.15 ATOM 8950 CB THR 608 28.350 21.352 37.026 1.00 1.15 ATOM 8951 OG1 THR 608 29.725 20.988 36.988 1.00 1.15 ATOM 8952 CG2 THR 608 27.546 20.208 37.679 1.00 1.15 ATOM 8960 N PRO 609 25.379 21.544 35.284 1.00 1.31 ATOM 8961 CA PRO 609 24.052 22.131 35.256 1.00 1.31 ATOM 8962 C PRO 609 23.395 22.008 36.605 1.00 1.31 ATOM 8963 O PRO 609 23.657 21.052 37.335 1.00 1.31 ATOM 8964 CB PRO 609 23.292 21.279 34.229 1.00 1.31 ATOM 8965 CG PRO 609 23.979 19.911 34.268 1.00 1.31 ATOM 8966 CD PRO 609 25.436 20.283 34.539 1.00 1.31 ATOM 8974 N THR 610 22.547 22.978 36.931 1.00 1.65 ATOM 8975 CA THR 610 21.672 22.944 38.075 1.00 1.65 ATOM 8976 C THR 610 20.341 23.339 37.498 1.00 1.65 ATOM 8977 O THR 610 20.240 24.361 36.819 1.00 1.65 ATOM 8978 CB THR 610 22.116 23.885 39.184 1.00 1.65 ATOM 8979 OG1 THR 610 23.325 23.402 39.755 1.00 1.65 ATOM 8980 CG2 THR 610 21.056 24.010 40.299 1.00 1.65 ATOM 8988 N GLU 611 19.315 22.515 37.739 1.00 1.99 ATOM 8989 CA GLU 611 17.960 22.683 37.250 1.00 1.99 ATOM 8990 C GLU 611 17.838 22.767 35.742 1.00 1.99 ATOM 8991 O GLU 611 17.501 23.813 35.189 1.00 1.99 ATOM 8992 CB GLU 611 17.266 23.893 37.936 1.00 1.99 ATOM 8993 CG GLU 611 17.077 23.705 39.457 1.00 1.99 ATOM 8994 CD GLU 611 16.470 24.946 40.120 1.00 1.99 ATOM 8995 OE1 GLU 611 16.203 25.952 39.410 1.00 1.99 ATOM 8996 OE2 GLU 611 16.271 24.895 41.363 1.00 1.99 ATOM 9003 N VAL 612 18.124 21.655 35.052 1.00 2.15 ATOM 9004 CA VAL 612 17.966 21.517 33.614 1.00 2.15 ATOM 9005 C VAL 612 16.510 21.681 33.228 1.00 2.15 ATOM 9006 O VAL 612 15.634 21.025 33.788 1.00 2.15 ATOM 9007 CB VAL 612 18.480 20.178 33.076 1.00 2.15 ATOM 9008 CG1 VAL 612 18.304 20.079 31.542 1.00 2.15 ATOM 9009 CG2 VAL 612 19.967 20.026 33.443 1.00 2.15 ATOM 9019 N GLY 613 16.247 22.559 32.259 1.00 2.04 ATOM 9020 CA GLY 613 14.933 22.783 31.701 1.00 2.04 ATOM 9021 C GLY 613 15.017 22.724 30.205 1.00 2.04 ATOM 9022 O GLY 613 14.000 22.822 29.521 1.00 2.04 ATOM 9026 N ILE 614 16.231 22.579 29.671 1.00 1.74 ATOM 9027 CA ILE 614 16.517 22.618 28.256 1.00 1.74 ATOM 9028 C ILE 614 16.915 21.242 27.782 1.00 1.74 ATOM 9029 O ILE 614 17.699 21.113 26.847 1.00 1.74 ATOM 9030 CB ILE 614 17.623 23.610 27.894 1.00 1.74 ATOM 9031 CG1 ILE 614 18.974 23.313 28.601 1.00 1.74 ATOM 9032 CG2 ILE 614 17.104 25.038 28.176 1.00 1.74 ATOM 9033 CD1 ILE 614 20.184 23.764 27.774 1.00 1.74 ATOM 9045 N PHE 615 16.423 20.184 28.432 1.00 2.14 ATOM 9046 CA PHE 615 16.777 18.824 28.069 1.00 2.14 ATOM 9047 C PHE 615 16.304 18.497 26.661 1.00 2.14 ATOM 9048 O PHE 615 15.109 18.524 26.369 1.00 2.14 ATOM 9049 CB PHE 615 16.215 17.816 29.110 1.00 2.14 ATOM 9050 CG PHE 615 16.680 16.404 28.831 1.00 2.14 ATOM 9051 CD1 PHE 615 18.028 16.054 29.039 1.00 2.14 ATOM 9052 CD2 PHE 615 15.788 15.420 28.369 1.00 2.14 ATOM 9053 CE1 PHE 615 18.478 14.756 28.772 1.00 2.14 ATOM 9054 CE2 PHE 615 16.237 14.120 28.101 1.00 2.14 ATOM 9055 CZ PHE 615 17.583 13.788 28.301 1.00 2.14 ATOM 9065 N TRP 616 17.257 18.231 25.771 1.00 2.18 ATOM 9066 CA TRP 616 17.022 18.092 24.359 1.00 2.18 ATOM 9067 C TRP 616 18.206 17.350 23.811 1.00 2.18 ATOM 9068 O TRP 616 19.180 17.097 24.522 1.00 2.18 ATOM 9069 CB TRP 616 16.868 19.495 23.670 1.00 2.18 ATOM 9070 CG TRP 616 17.915 20.560 23.893 1.00 2.18 ATOM 9071 CD1 TRP 616 19.253 20.448 24.187 1.00 2.18 ATOM 9072 CD2 TRP 616 17.645 21.975 23.850 1.00 2.18 ATOM 9073 NE1 TRP 616 19.808 21.690 24.338 1.00 2.18 ATOM 9074 CE2 TRP 616 18.858 22.644 24.135 1.00 2.18 ATOM 9075 CE3 TRP 616 16.494 22.728 23.613 1.00 2.18 ATOM 9076 CZ2 TRP 616 18.944 24.031 24.167 1.00 2.18 ATOM 9077 CZ3 TRP 616 16.575 24.123 23.655 1.00 2.18 ATOM 9078 CH2 TRP 616 17.781 24.764 23.926 1.00 2.18 ATOM 9089 N ASN 617 18.147 16.989 22.526 1.00 1.83 ATOM 9090 CA ASN 617 19.304 16.555 21.763 1.00 1.83 ATOM 9091 C ASN 617 20.257 17.714 21.616 1.00 1.83 ATOM 9092 O ASN 617 19.810 18.857 21.542 1.00 1.83 ATOM 9093 CB ASN 617 18.880 16.059 20.354 1.00 1.83 ATOM 9094 CG ASN 617 18.020 14.790 20.452 1.00 1.83 ATOM 9095 OD1 ASN 617 17.931 14.140 21.498 1.00 1.83 ATOM 9096 ND2 ASN 617 17.355 14.439 19.311 1.00 1.83 ATOM 9103 N GLY 618 21.566 17.428 21.616 1.00 1.68 ATOM 9104 CA GLY 618 22.648 18.402 21.661 1.00 1.68 ATOM 9105 C GLY 618 22.450 19.588 20.753 1.00 1.68 ATOM 9106 O GLY 618 22.266 19.431 19.546 1.00 1.68 ATOM 9110 N ALA 619 22.468 20.788 21.332 1.00 1.61 ATOM 9111 CA ALA 619 22.074 21.979 20.630 1.00 1.61 ATOM 9112 C ALA 619 22.834 23.139 21.189 1.00 1.61 ATOM 9113 O ALA 619 23.222 23.142 22.357 1.00 1.61 ATOM 9114 CB ALA 619 20.564 22.280 20.727 1.00 1.61 ATOM 9120 N THR 620 23.070 24.137 20.339 1.00 1.33 ATOM 9121 CA THR 620 23.840 25.316 20.642 1.00 1.33 ATOM 9122 C THR 620 22.908 26.443 20.998 1.00 1.33 ATOM 9123 O THR 620 21.728 26.427 20.648 1.00 1.33 ATOM 9124 CB THR 620 24.744 25.742 19.487 1.00 1.33 ATOM 9125 OG1 THR 620 24.037 25.771 18.250 1.00 1.33 ATOM 9126 CG2 THR 620 25.907 24.737 19.379 1.00 1.33 ATOM 9134 N GLY 621 23.431 27.453 21.692 1.00 1.36 ATOM 9135 CA GLY 621 22.670 28.642 21.963 1.00 1.36 ATOM 9136 C GLY 621 23.573 29.685 22.529 1.00 1.36 ATOM 9137 O GLY 621 24.341 29.421 23.454 1.00 1.36 ATOM 9141 N LYS 622 23.478 30.903 21.987 1.00 1.00 ATOM 9142 CA LYS 622 24.097 32.089 22.531 1.00 1.00 ATOM 9143 C LYS 622 23.547 32.462 23.886 1.00 1.00 ATOM 9144 O LYS 622 22.361 32.278 24.159 1.00 1.00 ATOM 9145 CB LYS 622 23.976 33.275 21.547 1.00 1.00 ATOM 9146 CG LYS 622 24.961 33.165 20.373 1.00 1.00 ATOM 9147 CD LYS 622 25.043 34.449 19.534 1.00 1.00 ATOM 9148 CE LYS 622 26.138 34.381 18.460 1.00 1.00 ATOM 9149 NZ LYS 622 26.247 35.664 17.726 1.00 1.00 ATOM 9163 N CYS 623 24.414 32.966 24.761 1.00 0.81 ATOM 9164 CA CYS 623 24.074 33.263 26.127 1.00 0.81 ATOM 9165 C CYS 623 25.153 34.170 26.670 1.00 0.81 ATOM 9166 O CYS 623 26.245 34.246 26.109 1.00 0.81 ATOM 9167 CB CYS 623 23.871 31.931 26.926 1.00 0.81 ATOM 9168 SG CYS 623 24.058 31.954 28.743 1.00 0.81 ATOM 9174 N ILE 624 24.848 34.882 27.759 1.00 0.74 ATOM 9175 CA ILE 624 25.781 35.715 28.484 1.00 0.74 ATOM 9176 C ILE 624 25.941 35.122 29.860 1.00 0.74 ATOM 9177 O ILE 624 24.998 34.575 30.432 1.00 0.74 ATOM 9178 CB ILE 624 25.401 37.190 28.563 1.00 0.74 ATOM 9179 CG1 ILE 624 23.952 37.410 29.066 1.00 0.74 ATOM 9180 CG2 ILE 624 25.642 37.781 27.159 1.00 0.74 ATOM 9181 CD1 ILE 624 23.586 38.885 29.261 1.00 0.74 ATOM 9193 N PHE 625 27.161 35.192 30.393 1.00 0.70 ATOM 9194 CA PHE 625 27.579 34.401 31.527 1.00 0.70 ATOM 9195 C PHE 625 28.207 35.336 32.530 1.00 0.70 ATOM 9196 O PHE 625 29.314 35.111 33.016 1.00 0.70 ATOM 9197 CB PHE 625 28.622 33.355 31.037 1.00 0.70 ATOM 9198 CG PHE 625 28.744 32.175 31.969 1.00 0.70 ATOM 9199 CD1 PHE 625 27.604 31.461 32.381 1.00 0.70 ATOM 9200 CD2 PHE 625 30.009 31.737 32.400 1.00 0.70 ATOM 9201 CE1 PHE 625 27.723 30.349 33.222 1.00 0.70 ATOM 9202 CE2 PHE 625 30.130 30.618 33.232 1.00 0.70 ATOM 9203 CZ PHE 625 28.986 29.926 33.649 1.00 0.70 ATOM 9213 N GLY 626 27.491 36.409 32.871 1.00 1.12 ATOM 9214 CA GLY 626 27.894 37.341 33.902 1.00 1.12 ATOM 9215 C GLY 626 28.893 38.348 33.413 1.00 1.12 ATOM 9216 O GLY 626 29.662 38.884 34.208 1.00 1.12 ATOM 9220 N GLY 627 28.886 38.638 32.109 1.00 1.24 ATOM 9221 CA GLY 627 29.669 39.711 31.533 1.00 1.24 ATOM 9222 C GLY 627 30.470 39.273 30.344 1.00 1.24 ATOM 9223 O GLY 627 31.261 40.062 29.830 1.00 1.24 ATOM 9227 N ILE 628 30.297 38.036 29.871 1.00 0.99 ATOM 9228 CA ILE 628 31.001 37.545 28.701 1.00 0.99 ATOM 9229 C ILE 628 30.007 36.849 27.817 1.00 0.99 ATOM 9230 O ILE 628 29.062 36.227 28.297 1.00 0.99 ATOM 9231 CB ILE 628 32.174 36.598 28.990 1.00 0.99 ATOM 9232 CG1 ILE 628 31.779 35.397 29.890 1.00 0.99 ATOM 9233 CG2 ILE 628 33.323 37.435 29.588 1.00 0.99 ATOM 9234 CD1 ILE 628 32.925 34.412 30.153 1.00 0.99 ATOM 9246 N ASP 629 30.214 36.955 26.504 1.00 0.90 ATOM 9247 CA ASP 629 29.410 36.318 25.487 1.00 0.90 ATOM 9248 C ASP 629 30.001 34.965 25.190 1.00 0.90 ATOM 9249 O ASP 629 31.213 34.765 25.276 1.00 0.90 ATOM 9250 CB ASP 629 29.468 37.122 24.156 1.00 0.90 ATOM 9251 CG ASP 629 28.731 38.462 24.251 1.00 0.90 ATOM 9252 OD1 ASP 629 28.271 38.853 25.353 1.00 0.90 ATOM 9253 OD2 ASP 629 28.623 39.116 23.179 1.00 0.90 ATOM 9258 N GLY 630 29.149 34.015 24.808 1.00 0.82 ATOM 9259 CA GLY 630 29.618 32.758 24.298 1.00 0.82 ATOM 9260 C GLY 630 28.463 32.007 23.732 1.00 0.82 ATOM 9261 O GLY 630 27.309 32.424 23.836 1.00 0.82 ATOM 9265 N THR 631 28.782 30.865 23.124 1.00 0.79 ATOM 9266 CA THR 631 27.850 29.934 22.546 1.00 0.79 ATOM 9267 C THR 631 28.120 28.648 23.275 1.00 0.79 ATOM 9268 O THR 631 29.262 28.203 23.376 1.00 0.79 ATOM 9269 CB THR 631 28.020 29.752 21.045 1.00 0.79 ATOM 9270 OG1 THR 631 27.822 30.996 20.384 1.00 0.79 ATOM 9271 CG2 THR 631 26.992 28.741 20.496 1.00 0.79 ATOM 9279 N PHE 632 27.068 28.047 23.824 1.00 0.77 ATOM 9280 CA PHE 632 27.154 26.927 24.727 1.00 0.77 ATOM 9281 C PHE 632 26.537 25.777 23.989 1.00 0.77 ATOM 9282 O PHE 632 25.457 25.923 23.425 1.00 0.77 ATOM 9283 CB PHE 632 26.275 27.160 25.990 1.00 0.77 ATOM 9284 CG PHE 632 26.750 28.311 26.852 1.00 0.77 ATOM 9285 CD1 PHE 632 26.686 29.651 26.421 1.00 0.77 ATOM 9286 CD2 PHE 632 27.154 28.060 28.177 1.00 0.77 ATOM 9287 CE1 PHE 632 26.979 30.703 27.294 1.00 0.77 ATOM 9288 CE2 PHE 632 27.381 29.116 29.070 1.00 0.77 ATOM 9289 CZ PHE 632 27.287 30.434 28.629 1.00 0.77 ATOM 9299 N SER 633 27.211 24.627 23.978 1.00 0.89 ATOM 9300 CA SER 633 26.800 23.476 23.210 1.00 0.89 ATOM 9301 C SER 633 26.504 22.362 24.171 1.00 0.89 ATOM 9302 O SER 633 27.324 22.019 25.018 1.00 0.89 ATOM 9303 CB SER 633 27.944 23.041 22.254 1.00 0.89 ATOM 9304 OG SER 633 27.536 22.001 21.368 1.00 0.89 ATOM 9310 N THR 634 25.313 21.776 24.047 1.00 0.91 ATOM 9311 CA THR 634 24.822 20.729 24.917 1.00 0.91 ATOM 9312 C THR 634 25.296 19.429 24.322 1.00 0.91 ATOM 9313 O THR 634 25.249 19.242 23.109 1.00 0.91 ATOM 9314 CB THR 634 23.298 20.739 25.026 1.00 0.91 ATOM 9315 OG1 THR 634 22.821 22.056 25.277 1.00 0.91 ATOM 9316 CG2 THR 634 22.817 19.808 26.154 1.00 0.91 ATOM 9324 N THR 635 25.795 18.530 25.170 1.00 1.23 ATOM 9325 CA THR 635 26.314 17.243 24.769 1.00 1.23 ATOM 9326 C THR 635 25.609 16.245 25.643 1.00 1.23 ATOM 9327 O THR 635 25.730 16.290 26.866 1.00 1.23 ATOM 9328 CB THR 635 27.819 17.122 24.975 1.00 1.23 ATOM 9329 OG1 THR 635 28.487 18.177 24.292 1.00 1.23 ATOM 9330 CG2 THR 635 28.339 15.769 24.443 1.00 1.23 ATOM 9338 N LEU 636 24.873 15.317 25.026 1.00 1.44 ATOM 9339 CA LEU 636 24.284 14.189 25.710 1.00 1.44 ATOM 9340 C LEU 636 25.308 13.091 25.648 1.00 1.44 ATOM 9341 O LEU 636 25.799 12.756 24.570 1.00 1.44 ATOM 9342 CB LEU 636 22.965 13.764 25.017 1.00 1.44 ATOM 9343 CG LEU 636 22.224 12.569 25.670 1.00 1.44 ATOM 9344 CD1 LEU 636 21.835 12.843 27.136 1.00 1.44 ATOM 9345 CD2 LEU 636 20.983 12.182 24.843 1.00 1.44 ATOM 9357 N VAL 637 25.686 12.553 26.809 1.00 1.64 ATOM 9358 CA VAL 637 26.858 11.718 26.926 1.00 1.64 ATOM 9359 C VAL 637 26.441 10.274 27.023 1.00 1.64 ATOM 9360 O VAL 637 27.010 9.417 26.349 1.00 1.64 ATOM 9361 CB VAL 637 27.691 12.096 28.153 1.00 1.64 ATOM 9362 CG1 VAL 637 29.002 11.280 28.179 1.00 1.64 ATOM 9363 CG2 VAL 637 27.994 13.611 28.118 1.00 1.64 ATOM 9373 N ASN 638 25.436 9.986 27.852 1.00 2.27 ATOM 9374 CA ASN 638 25.082 8.630 28.208 1.00 2.27 ATOM 9375 C ASN 638 23.601 8.456 28.058 1.00 2.27 ATOM 9376 O ASN 638 22.848 9.428 28.024 1.00 2.27 ATOM 9377 CB ASN 638 25.456 8.344 29.694 1.00 2.27 ATOM 9378 CG ASN 638 26.980 8.269 29.874 1.00 2.27 ATOM 9379 OD1 ASN 638 27.709 7.861 28.964 1.00 2.27 ATOM 9380 ND2 ASN 638 27.470 8.694 31.075 1.00 2.27 ATOM 9387 N ALA 639 23.171 7.196 27.969 1.00 3.60 ATOM 9388 CA ALA 639 21.782 6.804 27.988 1.00 3.60 ATOM 9389 C ALA 639 21.590 5.756 29.062 1.00 3.60 ATOM 9390 O ALA 639 20.472 5.298 29.296 1.00 3.60 ATOM 9391 CB ALA 639 21.351 6.204 26.635 1.00 3.60 ATOM 9397 N GLY 640 22.671 5.398 29.766 1.00 3.05 ATOM 9398 CA GLY 640 22.639 4.534 30.931 1.00 3.05 ATOM 9399 C GLY 640 22.364 5.361 32.153 1.00 3.05 ATOM 9400 O GLY 640 21.790 4.886 33.131 1.00 3.05 ATOM 9404 N THR 641 22.759 6.631 32.088 1.00 2.67 ATOM 9405 CA THR 641 22.451 7.663 33.043 1.00 2.67 ATOM 9406 C THR 641 22.090 8.819 32.150 1.00 2.67 ATOM 9407 O THR 641 22.434 8.828 30.971 1.00 2.67 ATOM 9408 CB THR 641 23.606 8.042 33.975 1.00 2.67 ATOM 9409 OG1 THR 641 24.803 8.343 33.260 1.00 2.67 ATOM 9410 CG2 THR 641 23.881 6.876 34.945 1.00 2.67 ATOM 9418 N GLY 642 21.393 9.819 32.692 1.00 2.22 ATOM 9419 CA GLY 642 20.982 10.993 31.946 1.00 2.22 ATOM 9420 C GLY 642 22.030 12.069 32.010 1.00 2.22 ATOM 9421 O GLY 642 21.710 13.237 32.229 1.00 2.22 ATOM 9425 N GLU 643 23.301 11.699 31.830 1.00 1.71 ATOM 9426 CA GLU 643 24.427 12.596 31.932 1.00 1.71 ATOM 9427 C GLU 643 24.470 13.522 30.748 1.00 1.71 ATOM 9428 O GLU 643 24.529 13.080 29.602 1.00 1.71 ATOM 9429 CB GLU 643 25.749 11.798 32.020 1.00 1.71 ATOM 9430 CG GLU 643 26.995 12.688 32.216 1.00 1.71 ATOM 9431 CD GLU 643 28.248 11.830 32.381 1.00 1.71 ATOM 9432 OE1 GLU 643 28.263 10.975 33.306 1.00 1.71 ATOM 9433 OE2 GLU 643 29.205 12.022 31.586 1.00 1.71 ATOM 9440 N THR 644 24.416 14.823 31.023 1.00 1.36 ATOM 9441 CA THR 644 24.365 15.850 30.016 1.00 1.36 ATOM 9442 C THR 644 25.319 16.893 30.522 1.00 1.36 ATOM 9443 O THR 644 25.229 17.319 31.672 1.00 1.36 ATOM 9444 CB THR 644 22.975 16.453 29.849 1.00 1.36 ATOM 9445 OG1 THR 644 22.014 15.424 29.645 1.00 1.36 ATOM 9446 CG2 THR 644 22.940 17.412 28.644 1.00 1.36 ATOM 9454 N GLN 645 26.257 17.304 29.670 1.00 1.06 ATOM 9455 CA GLN 645 27.257 18.293 29.981 1.00 1.06 ATOM 9456 C GLN 645 27.052 19.429 29.026 1.00 1.06 ATOM 9457 O GLN 645 26.707 19.216 27.866 1.00 1.06 ATOM 9458 CB GLN 645 28.682 17.710 29.793 1.00 1.06 ATOM 9459 CG GLN 645 29.021 16.532 30.733 1.00 1.06 ATOM 9460 CD GLN 645 28.748 16.903 32.198 1.00 1.06 ATOM 9461 OE1 GLN 645 29.112 17.995 32.650 1.00 1.06 ATOM 9462 NE2 GLN 645 28.101 15.969 32.954 1.00 1.06 ATOM 9471 N LEU 646 27.248 20.659 29.506 1.00 0.77 ATOM 9472 CA LEU 646 27.119 21.841 28.689 1.00 0.77 ATOM 9473 C LEU 646 28.501 22.412 28.575 1.00 0.77 ATOM 9474 O LEU 646 29.200 22.566 29.573 1.00 0.77 ATOM 9475 CB LEU 646 26.171 22.867 29.362 1.00 0.77 ATOM 9476 CG LEU 646 25.807 24.073 28.463 1.00 0.77 ATOM 9477 CD1 LEU 646 24.946 23.657 27.259 1.00 0.77 ATOM 9478 CD2 LEU 646 25.079 25.177 29.241 1.00 0.77 ATOM 9490 N VAL 647 28.931 22.692 27.344 1.00 0.60 ATOM 9491 CA VAL 647 30.295 23.044 27.042 1.00 0.60 ATOM 9492 C VAL 647 30.279 24.432 26.463 1.00 0.60 ATOM 9493 O VAL 647 29.775 24.661 25.366 1.00 0.60 ATOM 9494 CB VAL 647 30.942 22.060 26.071 1.00 0.60 ATOM 9495 CG1 VAL 647 32.392 22.485 25.762 1.00 0.60 ATOM 9496 CG2 VAL 647 30.903 20.646 26.694 1.00 0.60 ATOM 9506 N PHE 648 30.836 25.383 27.211 1.00 0.60 ATOM 9507 CA PHE 648 31.036 26.763 26.843 1.00 0.60 ATOM 9508 C PHE 648 32.080 26.874 25.758 1.00 0.60 ATOM 9509 O PHE 648 33.020 26.088 25.725 1.00 0.60 ATOM 9510 CB PHE 648 31.494 27.553 28.100 1.00 0.60 ATOM 9511 CG PHE 648 31.546 29.043 27.876 1.00 0.60 ATOM 9512 CD1 PHE 648 30.386 29.736 27.499 1.00 0.60 ATOM 9513 CD2 PHE 648 32.728 29.773 28.085 1.00 0.60 ATOM 9514 CE1 PHE 648 30.382 31.131 27.405 1.00 0.60 ATOM 9515 CE2 PHE 648 32.728 31.167 27.954 1.00 0.60 ATOM 9516 CZ PHE 648 31.555 31.851 27.629 1.00 0.60 ATOM 9526 N THR 649 31.927 27.853 24.868 1.00 0.68 ATOM 9527 CA THR 649 32.953 28.268 23.936 1.00 0.68 ATOM 9528 C THR 649 32.661 29.737 23.796 1.00 0.68 ATOM 9529 O THR 649 31.502 30.135 23.718 1.00 0.68 ATOM 9530 CB THR 649 32.880 27.587 22.572 1.00 0.68 ATOM 9531 OG1 THR 649 32.877 26.172 22.724 1.00 0.68 ATOM 9532 CG2 THR 649 34.086 27.983 21.698 1.00 0.68 ATOM 9540 N ARG 650 33.696 30.580 23.789 1.00 0.81 ATOM 9541 CA ARG 650 33.517 32.010 23.629 1.00 0.81 ATOM 9542 C ARG 650 33.267 32.440 22.208 1.00 0.81 ATOM 9543 O ARG 650 33.639 31.754 21.258 1.00 0.81 ATOM 9544 CB ARG 650 34.689 32.796 24.260 1.00 0.81 ATOM 9545 CG ARG 650 34.583 32.753 25.790 1.00 0.81 ATOM 9546 CD ARG 650 35.614 33.566 26.576 1.00 0.81 ATOM 9547 NE ARG 650 35.481 35.019 26.246 1.00 0.81 ATOM 9548 CZ ARG 650 36.081 35.983 26.982 1.00 0.81 ATOM 9549 NH1 ARG 650 36.746 35.680 28.114 1.00 0.81 ATOM 9550 NH2 ARG 650 36.019 37.265 26.570 1.00 0.81 ATOM 9564 N ASP 651 32.634 33.605 22.054 1.00 1.23 ATOM 9565 CA ASP 651 32.329 34.221 20.778 1.00 1.23 ATOM 9566 C ASP 651 33.425 35.211 20.431 1.00 1.23 ATOM 9567 O ASP 651 33.277 36.038 19.534 1.00 1.23 ATOM 9568 CB ASP 651 30.988 35.016 20.875 1.00 1.23 ATOM 9569 CG ASP 651 29.777 34.089 21.026 1.00 1.23 ATOM 9570 OD1 ASP 651 29.915 32.854 20.823 1.00 1.23 ATOM 9571 OD2 ASP 651 28.670 34.630 21.297 1.00 1.23 ATOM 9576 N SER 652 34.547 35.141 21.145 1.00 1.50 ATOM 9577 CA SER 652 35.631 36.082 21.045 1.00 1.50 ATOM 9578 C SER 652 36.866 35.373 21.530 1.00 1.50 ATOM 9579 O SER 652 36.796 34.240 21.999 1.00 1.50 ATOM 9580 CB SER 652 35.347 37.341 21.919 1.00 1.50 ATOM 9581 OG SER 652 35.052 37.009 23.276 1.00 1.50 ATOM 9587 N ALA 653 38.015 36.038 21.410 1.00 1.48 ATOM 9588 CA ALA 653 39.288 35.553 21.879 1.00 1.48 ATOM 9589 C ALA 653 39.866 36.680 22.688 1.00 1.48 ATOM 9590 O ALA 653 40.927 37.217 22.371 1.00 1.48 ATOM 9591 CB ALA 653 40.238 35.175 20.724 1.00 1.48 ATOM 9597 N GLY 654 39.145 37.074 23.741 1.00 1.55 ATOM 9598 CA GLY 654 39.462 38.196 24.599 1.00 1.55 ATOM 9599 C GLY 654 40.460 37.812 25.655 1.00 1.55 ATOM 9600 O GLY 654 41.595 37.446 25.355 1.00 1.55 ATOM 9604 N SER 655 40.058 37.914 26.921 1.00 1.41 ATOM 9605 CA SER 655 40.907 37.618 28.048 1.00 1.41 ATOM 9606 C SER 655 40.018 36.971 29.065 1.00 1.41 ATOM 9607 O SER 655 38.841 37.317 29.166 1.00 1.41 ATOM 9608 CB SER 655 41.523 38.925 28.619 1.00 1.41 ATOM 9609 OG SER 655 42.422 38.673 29.696 1.00 1.41 ATOM 9615 N ALA 656 40.564 36.001 29.805 1.00 1.12 ATOM 9616 CA ALA 656 39.853 35.173 30.753 1.00 1.12 ATOM 9617 C ALA 656 39.203 35.964 31.861 1.00 1.12 ATOM 9618 O ALA 656 39.752 36.959 32.333 1.00 1.12 ATOM 9619 CB ALA 656 40.764 34.100 31.382 1.00 1.12 ATOM 9625 N VAL 657 38.006 35.536 32.270 1.00 0.91 ATOM 9626 CA VAL 657 37.199 36.217 33.255 1.00 0.91 ATOM 9627 C VAL 657 36.954 35.231 34.359 1.00 0.91 ATOM 9628 O VAL 657 36.586 34.085 34.108 1.00 0.91 ATOM 9629 CB VAL 657 35.890 36.765 32.686 1.00 0.91 ATOM 9630 CG1 VAL 657 34.988 37.356 33.792 1.00 0.91 ATOM 9631 CG2 VAL 657 36.245 37.845 31.643 1.00 0.91 ATOM 9641 N SER 658 37.169 35.663 35.606 1.00 0.96 ATOM 9642 CA SER 658 36.904 34.873 36.785 1.00 0.96 ATOM 9643 C SER 658 35.438 35.001 37.109 1.00 0.96 ATOM 9644 O SER 658 34.927 36.104 37.296 1.00 0.96 ATOM 9645 CB SER 658 37.774 35.361 37.971 1.00 0.96 ATOM 9646 OG SER 658 37.619 34.535 39.122 1.00 0.96 ATOM 9652 N VAL 659 34.744 33.865 37.145 1.00 0.99 ATOM 9653 CA VAL 659 33.311 33.789 37.273 1.00 0.99 ATOM 9654 C VAL 659 33.046 32.986 38.522 1.00 0.99 ATOM 9655 O VAL 659 33.671 31.952 38.755 1.00 0.99 ATOM 9656 CB VAL 659 32.676 33.157 36.034 1.00 0.99 ATOM 9657 CG1 VAL 659 31.168 32.938 36.230 1.00 0.99 ATOM 9658 CG2 VAL 659 32.929 34.071 34.815 1.00 0.99 ATOM 9668 N SER 660 32.134 33.479 39.363 1.00 1.38 ATOM 9669 CA SER 660 31.664 32.871 40.595 1.00 1.38 ATOM 9670 C SER 660 31.121 31.461 40.445 1.00 1.38 ATOM 9671 O SER 660 30.754 31.026 39.355 1.00 1.38 ATOM 9672 CB SER 660 30.629 33.796 41.287 1.00 1.38 ATOM 9673 OG SER 660 29.582 34.179 40.401 1.00 1.38 ATOM 9679 N THR 661 31.085 30.719 41.557 1.00 1.38 ATOM 9680 CA THR 661 30.655 29.330 41.639 1.00 1.38 ATOM 9681 C THR 661 29.218 29.147 41.193 1.00 1.38 ATOM 9682 O THR 661 28.905 28.201 40.478 1.00 1.38 ATOM 9683 CB THR 661 30.850 28.752 43.039 1.00 1.38 ATOM 9684 OG1 THR 661 32.226 28.817 43.397 1.00 1.38 ATOM 9685 CG2 THR 661 30.401 27.277 43.123 1.00 1.38 ATOM 9693 N THR 662 28.337 30.075 41.573 1.00 1.37 ATOM 9694 CA THR 662 26.985 30.146 41.056 1.00 1.37 ATOM 9695 C THR 662 26.987 31.446 40.305 1.00 1.37 ATOM 9696 O THR 662 27.267 32.496 40.881 1.00 1.37 ATOM 9697 CB THR 662 25.912 30.148 42.132 1.00 1.37 ATOM 9698 OG1 THR 662 26.036 28.978 42.931 1.00 1.37 ATOM 9699 CG2 THR 662 24.507 30.172 41.496 1.00 1.37 ATOM 9707 N ALA 663 26.738 31.383 38.996 1.00 1.24 ATOM 9708 CA ALA 663 27.041 32.472 38.096 1.00 1.24 ATOM 9709 C ALA 663 25.877 32.896 37.250 1.00 1.24 ATOM 9710 O ALA 663 26.035 33.754 36.382 1.00 1.24 ATOM 9711 CB ALA 663 28.104 31.983 37.097 1.00 1.24 ATOM 9717 N THR 664 24.704 32.295 37.472 1.00 1.11 ATOM 9718 CA THR 664 23.537 32.381 36.609 1.00 1.11 ATOM 9719 C THR 664 23.843 31.903 35.191 1.00 1.11 ATOM 9720 O THR 664 24.863 31.264 34.933 1.00 1.11 ATOM 9721 CB THR 664 22.738 33.695 36.673 1.00 1.11 ATOM 9722 OG1 THR 664 23.378 34.786 36.018 1.00 1.11 ATOM 9723 CG2 THR 664 22.470 34.077 38.144 1.00 1.11 ATOM 9731 N PHE 665 22.931 32.176 34.262 1.00 0.80 ATOM 9732 CA PHE 665 23.014 31.781 32.881 1.00 0.80 ATOM 9733 C PHE 665 21.821 32.489 32.313 1.00 0.80 ATOM 9734 O PHE 665 20.695 32.220 32.729 1.00 0.80 ATOM 9735 CB PHE 665 22.823 30.232 32.746 1.00 0.80 ATOM 9736 CG PHE 665 22.805 29.745 31.313 1.00 0.80 ATOM 9737 CD1 PHE 665 23.921 29.077 30.784 1.00 0.80 ATOM 9738 CD2 PHE 665 21.655 29.875 30.505 1.00 0.80 ATOM 9739 CE1 PHE 665 23.897 28.577 29.480 1.00 0.80 ATOM 9740 CE2 PHE 665 21.647 29.407 29.184 1.00 0.80 ATOM 9741 CZ PHE 665 22.770 28.751 28.671 1.00 0.80 ATOM 9751 N ALA 666 22.037 33.395 31.363 1.00 0.94 ATOM 9752 CA ALA 666 20.943 34.081 30.724 1.00 0.94 ATOM 9753 C ALA 666 21.088 33.876 29.253 1.00 0.94 ATOM 9754 O ALA 666 22.002 34.411 28.627 1.00 0.94 ATOM 9755 CB ALA 666 20.936 35.592 31.026 1.00 0.94 ATOM 9761 N MET 667 20.182 33.084 28.677 1.00 1.01 ATOM 9762 CA MET 667 20.116 32.785 27.266 1.00 1.01 ATOM 9763 C MET 667 19.820 34.039 26.483 1.00 1.01 ATOM 9764 O MET 667 19.085 34.910 26.948 1.00 1.01 ATOM 9765 CB MET 667 19.013 31.724 27.006 1.00 1.01 ATOM 9766 CG MET 667 19.050 31.081 25.604 1.00 1.01 ATOM 9767 SD MET 667 17.801 29.775 25.369 1.00 1.01 ATOM 9768 CE MET 667 18.351 29.276 23.710 1.00 1.01 ATOM 9778 N ARG 668 20.392 34.139 25.285 1.00 1.25 ATOM 9779 CA ARG 668 20.004 35.101 24.287 1.00 1.25 ATOM 9780 C ARG 668 19.327 34.240 23.242 1.00 1.25 ATOM 9781 O ARG 668 20.044 33.561 22.506 1.00 1.25 ATOM 9782 CB ARG 668 21.255 35.783 23.686 1.00 1.25 ATOM 9783 CG ARG 668 22.014 36.659 24.700 1.00 1.25 ATOM 9784 CD ARG 668 23.246 37.359 24.105 1.00 1.25 ATOM 9785 NE ARG 668 24.303 36.330 23.840 1.00 1.25 ATOM 9786 CZ ARG 668 25.505 36.622 23.289 1.00 1.25 ATOM 9787 NH1 ARG 668 25.822 37.881 22.934 1.00 1.25 ATOM 9788 NH2 ARG 668 26.397 35.628 23.090 1.00 1.25 TER END