####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 563), selected 80 , name T1052TS335_1-D3 # Molecule2: number of CA atoms 80 ( 563), selected 80 , name T1052-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS335_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 2.00 2.00 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 2.00 2.00 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 614 - 637 0.99 2.35 LCS_AVERAGE: 24.00 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 589 T 589 20 80 80 9 21 55 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 590 R 590 20 80 80 9 21 55 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT Q 591 Q 591 20 80 80 9 21 55 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT Y 592 Y 592 20 80 80 9 37 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 593 A 593 20 80 80 15 39 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 594 P 594 20 80 80 15 41 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 595 V 595 20 80 80 15 41 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 596 G 596 20 80 80 9 29 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 597 G 597 20 80 80 9 42 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 598 S 598 20 80 80 16 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 599 I 599 20 80 80 20 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 600 P 600 20 80 80 19 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 601 A 601 20 80 80 19 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 602 S 602 20 80 80 19 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 603 G 603 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 604 S 604 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 605 V 605 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 606 A 606 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 607 L 607 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 608 T 608 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 609 P 609 20 80 80 3 24 56 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 610 T 610 4 80 80 3 3 6 6 8 13 65 73 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT E 611 E 611 4 80 80 3 3 7 12 25 57 67 73 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 612 V 612 4 80 80 3 3 4 34 52 63 70 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 613 G 613 4 80 80 3 4 4 4 4 6 13 67 76 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 614 I 614 24 80 80 9 42 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 615 F 615 24 80 80 3 14 55 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT W 616 W 616 24 80 80 5 16 55 67 70 72 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT N 617 N 617 24 80 80 15 41 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 618 G 618 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 619 A 619 24 80 80 7 42 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 620 T 620 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 621 G 621 24 80 80 15 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT K 622 K 622 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT C 623 C 623 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 624 I 624 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 625 F 625 24 80 80 15 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 626 G 626 24 80 80 12 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 627 G 627 24 80 80 20 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 628 I 628 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT D 629 D 629 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 630 G 630 24 80 80 20 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 631 T 631 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 632 F 632 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 633 S 633 24 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 634 T 634 24 80 80 5 21 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 635 T 635 24 80 80 5 20 55 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 636 L 636 24 80 80 12 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 637 V 637 24 80 80 5 19 35 64 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT N 638 N 638 13 80 80 6 16 45 63 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 639 A 639 13 80 80 10 35 51 63 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 640 G 640 13 80 80 6 12 24 58 66 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 641 T 641 13 80 80 6 12 20 51 66 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 642 G 642 20 80 80 6 28 42 63 69 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT E 643 E 643 20 80 80 7 34 47 63 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 644 T 644 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT Q 645 Q 645 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 646 L 646 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 647 V 647 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 648 F 648 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 649 T 649 20 80 80 12 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 650 R 650 20 80 80 10 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT D 651 D 651 20 80 80 11 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 652 S 652 20 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 653 A 653 20 80 80 13 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 654 G 654 20 80 80 15 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 655 S 655 20 80 80 11 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 656 A 656 20 80 80 16 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 657 V 657 20 80 80 14 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 658 S 658 20 80 80 13 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 659 V 659 20 80 80 7 31 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 660 S 660 20 80 80 3 14 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 661 T 661 20 80 80 7 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 662 T 662 20 80 80 9 39 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 663 A 663 20 80 80 9 23 55 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 664 T 664 8 80 80 9 21 55 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 665 F 665 8 80 80 5 42 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 666 A 666 6 80 80 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT M 667 M 667 6 80 80 3 6 42 63 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 668 R 668 4 80 80 3 4 9 53 67 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 LCS_AVERAGE LCS_A: 74.67 ( 24.00 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 23 44 58 67 70 73 75 77 77 79 80 80 80 80 80 80 80 80 80 80 GDT PERCENT_AT 28.75 55.00 72.50 83.75 87.50 91.25 93.75 96.25 96.25 98.75 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.34 0.62 0.88 1.08 1.22 1.38 1.53 1.67 1.67 1.90 2.00 2.00 2.00 2.00 2.00 2.00 2.00 2.00 2.00 2.00 GDT RMS_ALL_AT 2.15 2.07 2.12 2.17 2.08 2.05 2.04 2.02 2.02 2.00 2.00 2.00 2.00 2.00 2.00 2.00 2.00 2.00 2.00 2.00 # Checking swapping # possible swapping detected: Y 592 Y 592 # possible swapping detected: E 611 E 611 # possible swapping detected: F 615 F 615 # possible swapping detected: F 665 F 665 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA T 589 T 589 1.619 0 0.345 1.221 4.439 58.636 42.338 2.486 LGA R 590 R 590 1.791 0 0.037 0.858 3.648 50.909 35.537 3.648 LGA Q 591 Q 591 1.725 0 0.035 1.078 4.036 50.909 43.030 2.089 LGA Y 592 Y 592 1.548 0 0.080 0.251 1.883 50.909 50.909 1.883 LGA A 593 A 593 1.401 0 0.065 0.061 1.401 65.455 65.455 - LGA P 594 P 594 1.273 0 0.043 0.060 1.869 58.182 61.299 1.246 LGA V 595 V 595 1.556 0 0.639 1.493 4.072 40.000 42.078 1.754 LGA G 596 G 596 1.481 0 0.100 0.100 1.571 58.182 58.182 - LGA G 597 G 597 1.090 0 0.118 0.118 1.262 78.182 78.182 - LGA S 598 S 598 0.314 0 0.090 0.585 0.926 90.909 87.879 0.926 LGA I 599 I 599 0.704 0 0.036 0.074 0.958 81.818 81.818 0.958 LGA P 600 P 600 0.765 0 0.045 0.426 1.512 81.818 77.403 1.512 LGA A 601 A 601 0.824 0 0.064 0.070 1.055 81.818 78.545 - LGA S 602 S 602 0.607 0 0.088 0.551 2.524 77.727 70.000 2.524 LGA G 603 G 603 0.758 0 0.060 0.060 0.758 81.818 81.818 - LGA S 604 S 604 0.692 0 0.021 0.647 2.208 81.818 77.576 2.208 LGA V 605 V 605 0.570 0 0.035 0.063 0.749 90.909 87.013 0.669 LGA A 606 A 606 0.153 0 0.052 0.060 0.302 100.000 100.000 - LGA L 607 L 607 0.280 0 0.057 0.110 0.634 95.455 97.727 0.491 LGA T 608 T 608 0.735 0 0.060 0.096 2.319 63.182 64.416 1.786 LGA P 609 P 609 2.322 0 0.328 0.330 4.925 33.636 21.299 4.884 LGA T 610 T 610 6.053 0 0.612 1.411 10.192 2.727 1.558 8.391 LGA E 611 E 611 6.178 0 0.051 0.760 7.405 0.000 0.000 6.193 LGA V 612 V 612 5.238 0 0.108 0.130 5.861 1.818 1.299 4.850 LGA G 613 G 613 5.955 0 0.498 0.498 5.955 7.273 7.273 - LGA I 614 I 614 1.267 0 0.563 0.963 5.707 51.364 29.773 3.749 LGA F 615 F 615 2.593 0 0.250 0.257 2.937 30.000 28.264 2.893 LGA W 616 W 616 3.198 0 0.062 0.241 8.120 30.909 9.610 8.120 LGA N 617 N 617 2.134 0 0.016 0.127 2.602 41.818 43.182 1.791 LGA G 618 G 618 0.983 0 0.056 0.056 1.293 69.545 69.545 - LGA A 619 A 619 1.620 0 0.034 0.041 2.044 61.818 57.091 - LGA T 620 T 620 0.972 0 0.046 1.046 3.425 65.909 55.065 3.425 LGA G 621 G 621 1.201 0 0.049 0.049 1.201 73.636 73.636 - LGA K 622 K 622 0.882 0 0.066 0.657 3.725 77.727 55.960 3.725 LGA C 623 C 623 0.555 0 0.049 0.067 0.794 81.818 84.848 0.472 LGA I 624 I 624 0.442 0 0.031 0.047 0.538 90.909 95.455 0.308 LGA F 625 F 625 0.684 0 0.035 0.128 1.023 86.364 81.983 1.023 LGA G 626 G 626 0.714 0 0.091 0.091 0.787 81.818 81.818 - LGA G 627 G 627 0.817 0 0.114 0.114 1.392 77.727 77.727 - LGA I 628 I 628 0.736 0 0.043 0.063 0.930 81.818 81.818 0.719 LGA D 629 D 629 0.960 0 0.028 0.169 1.477 77.727 71.591 1.139 LGA G 630 G 630 0.969 0 0.077 0.077 0.969 81.818 81.818 - LGA T 631 T 631 0.509 0 0.121 1.013 2.105 86.364 73.766 2.105 LGA F 632 F 632 0.407 0 0.030 0.036 0.673 90.909 95.041 0.510 LGA S 633 S 633 0.440 0 0.141 0.196 0.716 95.455 96.970 0.322 LGA T 634 T 634 2.165 0 0.124 1.014 4.315 33.636 31.169 4.315 LGA T 635 T 635 2.536 0 0.055 1.059 4.807 45.455 34.026 4.807 LGA L 636 L 636 1.498 0 0.049 0.115 2.620 45.455 51.818 1.192 LGA V 637 V 637 2.661 0 0.079 0.073 4.504 30.909 23.117 4.504 LGA N 638 N 638 2.315 0 0.131 0.309 4.040 44.545 27.273 4.040 LGA A 639 A 639 1.714 0 0.136 0.145 3.187 36.818 42.545 - LGA G 640 G 640 4.066 0 0.088 0.088 5.465 6.364 6.364 - LGA T 641 T 641 4.205 0 0.037 0.090 4.673 8.182 6.494 4.014 LGA G 642 G 642 2.897 0 0.066 0.066 3.281 30.455 30.455 - LGA E 643 E 643 1.975 0 0.079 0.260 4.397 55.000 34.141 4.397 LGA T 644 T 644 0.354 0 0.111 0.892 2.584 86.364 71.948 2.584 LGA Q 645 Q 645 0.634 0 0.051 0.551 2.640 81.818 68.889 1.994 LGA L 646 L 646 0.424 0 0.033 1.331 3.247 100.000 72.273 2.655 LGA V 647 V 647 0.267 0 0.035 0.072 0.696 100.000 97.403 0.696 LGA F 648 F 648 0.532 0 0.034 0.219 0.882 86.364 83.471 0.528 LGA T 649 T 649 0.827 0 0.148 0.165 0.947 81.818 81.818 0.729 LGA R 650 R 650 1.335 0 0.034 0.700 1.688 65.455 76.364 0.812 LGA D 651 D 651 1.072 0 0.227 0.267 1.972 73.636 64.091 1.965 LGA S 652 S 652 0.742 0 0.087 0.159 3.295 62.727 51.212 3.295 LGA A 653 A 653 1.151 0 0.138 0.183 1.775 65.909 65.818 - LGA G 654 G 654 1.233 0 0.039 0.039 1.485 65.455 65.455 - LGA S 655 S 655 1.643 0 0.035 0.096 2.943 61.818 52.121 2.943 LGA A 656 A 656 0.735 0 0.057 0.058 0.908 81.818 81.818 - LGA V 657 V 657 0.838 0 0.040 0.049 1.201 81.818 74.805 1.063 LGA S 658 S 658 0.720 0 0.073 0.534 1.993 81.818 76.667 1.993 LGA V 659 V 659 1.472 0 0.036 0.058 2.032 55.000 53.247 1.911 LGA S 660 S 660 1.794 0 0.603 0.573 3.918 44.545 46.667 1.781 LGA T 661 T 661 1.022 0 0.268 0.315 1.666 65.909 68.312 0.710 LGA T 662 T 662 1.475 0 0.095 0.177 1.848 58.182 57.143 1.848 LGA A 663 A 663 1.879 0 0.070 0.070 1.921 50.909 50.909 - LGA T 664 T 664 1.756 0 0.041 0.079 2.434 54.545 47.532 2.434 LGA F 665 F 665 0.809 0 0.131 0.621 2.711 77.727 63.140 2.111 LGA A 666 A 666 0.817 0 0.257 0.296 0.925 86.364 85.455 - LGA M 667 M 667 2.228 0 0.044 0.195 5.881 33.636 20.455 5.881 LGA R 668 R 668 3.653 0 0.041 1.152 9.793 10.455 4.298 7.648 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 80 320 320 100.00 563 563 100.00 80 59 SUMMARY(RMSD_GDC): 1.995 1.987 2.541 62.131 57.829 43.544 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 77 1.67 83.750 91.107 4.345 LGA_LOCAL RMSD: 1.672 Number of atoms: 77 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.017 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 1.995 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.194545 * X + 0.901393 * Y + 0.386838 * Z + -88.322037 Y_new = 0.319082 * X + 0.314768 * Y + -0.893928 * Z + 20.479580 Z_new = -0.927545 * X + 0.297342 * Y + -0.226382 * Z + 29.930166 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.023273 1.187788 2.221522 [DEG: 58.6292 68.0552 127.2838 ] ZXZ: 0.408408 1.799158 -1.260577 [DEG: 23.4000 103.0841 -72.2258 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1052TS335_1-D3 REMARK 2: T1052-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS335_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 77 1.67 91.107 2.00 REMARK ---------------------------------------------------------- MOLECULE T1052TS335_1-D3 PFRMAT TS TARGET T1052 MODEL 1 PARENT N/A ATOM 8686 N THR 589 16.550 31.874 33.390 1.00 2.03 ATOM 8688 CA THR 589 17.052 32.124 34.723 1.00 2.03 ATOM 8690 CB THR 589 16.273 33.181 35.500 1.00 2.03 ATOM 8692 OG1 THR 589 16.302 34.415 34.791 1.00 2.03 ATOM 8694 CG2 THR 589 16.902 33.421 36.892 1.00 2.03 ATOM 8698 C THR 589 17.101 30.815 35.463 1.00 2.03 ATOM 8699 O THR 589 16.143 30.424 36.126 1.00 2.03 ATOM 8700 N ARG 590 18.238 30.123 35.356 1.00 1.93 ATOM 8702 CA ARG 590 18.536 28.911 36.075 1.00 1.93 ATOM 8704 CB ARG 590 18.112 27.649 35.279 1.00 1.93 ATOM 8707 CG ARG 590 16.588 27.552 35.067 1.00 1.93 ATOM 8710 CD ARG 590 16.102 26.216 34.495 1.00 1.93 ATOM 8713 NE ARG 590 16.192 25.191 35.582 1.00 1.93 ATOM 8715 CZ ARG 590 15.676 23.946 35.482 1.00 1.93 ATOM 8716 NH1 ARG 590 15.729 23.142 36.563 1.00 1.93 ATOM 8719 NH2 ARG 590 15.108 23.502 34.343 1.00 1.93 ATOM 8722 C ARG 590 20.019 28.936 36.323 1.00 1.93 ATOM 8723 O ARG 590 20.767 29.613 35.617 1.00 1.93 ATOM 8724 N GLN 591 20.453 28.240 37.373 1.00 2.12 ATOM 8726 CA GLN 591 21.773 28.368 37.937 1.00 2.12 ATOM 8728 CB GLN 591 21.681 28.410 39.484 1.00 2.12 ATOM 8731 CG GLN 591 20.846 29.580 40.052 1.00 2.12 ATOM 8734 CD GLN 591 21.250 30.916 39.414 1.00 2.12 ATOM 8735 OE1 GLN 591 22.386 31.374 39.590 1.00 2.12 ATOM 8736 NE2 GLN 591 20.303 31.549 38.663 1.00 2.12 ATOM 8739 C GLN 591 22.644 27.209 37.542 1.00 2.12 ATOM 8740 O GLN 591 22.238 26.050 37.617 1.00 2.12 ATOM 8741 N TYR 592 23.864 27.520 37.104 1.00 1.99 ATOM 8743 CA TYR 592 24.864 26.563 36.695 1.00 1.99 ATOM 8745 CB TYR 592 24.856 26.338 35.150 1.00 1.99 ATOM 8748 CG TYR 592 23.487 25.972 34.626 1.00 1.99 ATOM 8749 CD1 TYR 592 22.588 26.987 34.263 1.00 1.99 ATOM 8751 CE1 TYR 592 21.337 26.688 33.720 1.00 1.99 ATOM 8753 CZ TYR 592 20.954 25.354 33.548 1.00 1.99 ATOM 8754 OH TYR 592 19.685 25.066 33.003 1.00 1.99 ATOM 8756 CD2 TYR 592 23.094 24.634 34.444 1.00 1.99 ATOM 8758 CE2 TYR 592 21.832 24.323 33.915 1.00 1.99 ATOM 8760 C TYR 592 26.161 27.240 37.051 1.00 1.99 ATOM 8761 O TYR 592 26.228 28.466 37.121 1.00 1.99 ATOM 8762 N ALA 593 27.205 26.452 37.297 1.00 2.54 ATOM 8764 CA ALA 593 28.521 26.950 37.622 1.00 2.54 ATOM 8766 CB ALA 593 28.967 26.508 39.030 1.00 2.54 ATOM 8770 C ALA 593 29.467 26.356 36.607 1.00 2.54 ATOM 8771 O ALA 593 29.253 25.205 36.227 1.00 2.54 ATOM 8772 N PRO 594 30.504 27.046 36.097 1.00 2.65 ATOM 8773 CD PRO 594 30.908 28.377 36.573 1.00 2.65 ATOM 8776 CA PRO 594 31.595 26.399 35.378 1.00 2.65 ATOM 8778 CB PRO 594 32.525 27.550 34.984 1.00 2.65 ATOM 8781 CG PRO 594 32.363 28.557 36.122 1.00 2.65 ATOM 8784 C PRO 594 32.298 25.358 36.225 1.00 2.65 ATOM 8785 O PRO 594 32.382 25.524 37.441 1.00 2.65 ATOM 8786 N VAL 595 32.792 24.289 35.596 1.00 3.20 ATOM 8788 CA VAL 595 33.542 23.225 36.235 1.00 3.20 ATOM 8790 CB VAL 595 33.842 22.095 35.243 1.00 3.20 ATOM 8792 CG1 VAL 595 34.840 21.059 35.810 1.00 3.20 ATOM 8796 CG2 VAL 595 32.516 21.398 34.871 1.00 3.20 ATOM 8800 C VAL 595 34.822 23.740 36.864 1.00 3.20 ATOM 8801 O VAL 595 35.171 23.365 37.982 1.00 3.20 ATOM 8802 N GLY 596 35.528 24.625 36.155 1.00 3.71 ATOM 8804 CA GLY 596 36.840 25.095 36.545 1.00 3.71 ATOM 8807 C GLY 596 36.810 26.285 37.460 1.00 3.71 ATOM 8808 O GLY 596 37.804 26.573 38.122 1.00 3.71 ATOM 8809 N GLY 597 35.695 27.020 37.495 1.00 3.47 ATOM 8811 CA GLY 597 35.583 28.261 38.241 1.00 3.47 ATOM 8814 C GLY 597 36.090 29.416 37.423 1.00 3.47 ATOM 8815 O GLY 597 36.368 30.484 37.965 1.00 3.47 ATOM 8816 N SER 598 36.229 29.230 36.110 1.00 3.35 ATOM 8818 CA SER 598 36.789 30.236 35.245 1.00 3.35 ATOM 8820 CB SER 598 38.342 30.226 35.332 1.00 3.35 ATOM 8823 OG SER 598 38.932 31.316 34.628 1.00 3.35 ATOM 8825 C SER 598 36.331 29.931 33.843 1.00 3.35 ATOM 8826 O SER 598 35.938 28.806 33.535 1.00 3.35 ATOM 8827 N ILE 599 36.373 30.947 32.982 1.00 3.06 ATOM 8829 CA ILE 599 36.052 30.884 31.579 1.00 3.06 ATOM 8831 CB ILE 599 34.972 31.887 31.158 1.00 3.06 ATOM 8833 CG2 ILE 599 34.731 31.776 29.634 1.00 3.06 ATOM 8837 CG1 ILE 599 33.669 31.658 31.974 1.00 3.06 ATOM 8840 CD1 ILE 599 32.548 32.658 31.661 1.00 3.06 ATOM 8844 C ILE 599 37.366 31.227 30.901 1.00 3.06 ATOM 8845 O ILE 599 37.845 32.341 31.109 1.00 3.06 ATOM 8846 N PRO 600 38.004 30.338 30.116 1.00 3.51 ATOM 8847 CD PRO 600 37.629 28.927 30.036 1.00 3.51 ATOM 8850 CA PRO 600 39.233 30.586 29.367 1.00 3.51 ATOM 8852 CB PRO 600 39.401 29.332 28.500 1.00 3.51 ATOM 8855 CG PRO 600 38.814 28.225 29.373 1.00 3.51 ATOM 8858 C PRO 600 39.260 31.830 28.513 1.00 3.51 ATOM 8859 O PRO 600 38.205 32.338 28.135 1.00 3.51 ATOM 8860 N ALA 601 40.469 32.300 28.192 1.00 4.15 ATOM 8862 CA ALA 601 40.751 33.414 27.312 1.00 4.15 ATOM 8864 CB ALA 601 42.275 33.620 27.206 1.00 4.15 ATOM 8868 C ALA 601 40.201 33.182 25.925 1.00 4.15 ATOM 8869 O ALA 601 39.596 34.074 25.332 1.00 4.15 ATOM 8870 N SER 602 40.370 31.963 25.417 1.00 3.99 ATOM 8872 CA SER 602 39.729 31.491 24.220 1.00 3.99 ATOM 8874 CB SER 602 40.570 31.845 22.966 1.00 3.99 ATOM 8877 OG SER 602 39.851 31.584 21.765 1.00 3.99 ATOM 8879 C SER 602 39.670 30.004 24.439 1.00 3.99 ATOM 8880 O SER 602 40.479 29.455 25.187 1.00 3.99 ATOM 8881 N GLY 603 38.698 29.337 23.814 1.00 3.58 ATOM 8883 CA GLY 603 38.478 27.917 23.985 1.00 3.58 ATOM 8886 C GLY 603 37.147 27.712 24.637 1.00 3.58 ATOM 8887 O GLY 603 36.237 28.525 24.480 1.00 3.58 ATOM 8888 N SER 604 37.004 26.597 25.356 1.00 3.02 ATOM 8890 CA SER 604 35.743 26.187 25.930 1.00 3.02 ATOM 8892 CB SER 604 35.063 25.104 25.045 1.00 3.02 ATOM 8895 OG SER 604 35.894 23.965 24.834 1.00 3.02 ATOM 8897 C SER 604 35.955 25.672 27.328 1.00 3.02 ATOM 8898 O SER 604 37.068 25.311 27.710 1.00 3.02 ATOM 8899 N VAL 605 34.878 25.645 28.114 1.00 2.83 ATOM 8901 CA VAL 605 34.871 25.120 29.455 1.00 2.83 ATOM 8903 CB VAL 605 35.180 26.168 30.527 1.00 2.83 ATOM 8905 CG1 VAL 605 34.152 27.324 30.537 1.00 2.83 ATOM 8909 CG2 VAL 605 35.337 25.509 31.916 1.00 2.83 ATOM 8913 C VAL 605 33.516 24.492 29.642 1.00 2.83 ATOM 8914 O VAL 605 32.489 25.048 29.253 1.00 2.83 ATOM 8915 N ALA 606 33.492 23.290 30.219 1.00 2.69 ATOM 8917 CA ALA 606 32.291 22.588 30.601 1.00 2.69 ATOM 8919 CB ALA 606 32.583 21.132 31.008 1.00 2.69 ATOM 8923 C ALA 606 31.600 23.276 31.752 1.00 2.69 ATOM 8924 O ALA 606 32.244 23.891 32.601 1.00 2.69 ATOM 8925 N LEU 607 30.273 23.176 31.796 1.00 2.46 ATOM 8927 CA LEU 607 29.472 23.718 32.863 1.00 2.46 ATOM 8929 CB LEU 607 28.349 24.635 32.309 1.00 2.46 ATOM 8932 CG LEU 607 28.817 25.789 31.389 1.00 2.46 ATOM 8934 CD1 LEU 607 27.604 26.627 30.946 1.00 2.46 ATOM 8938 CD2 LEU 607 29.886 26.682 32.045 1.00 2.46 ATOM 8942 C LEU 607 28.830 22.556 33.556 1.00 2.46 ATOM 8943 O LEU 607 28.346 21.625 32.912 1.00 2.46 ATOM 8944 N THR 608 28.827 22.587 34.891 1.00 2.80 ATOM 8946 CA THR 608 28.120 21.632 35.721 1.00 2.80 ATOM 8948 CB THR 608 28.418 21.759 37.218 1.00 2.80 ATOM 8950 OG1 THR 608 28.083 23.042 37.741 1.00 2.80 ATOM 8952 CG2 THR 608 29.911 21.489 37.480 1.00 2.80 ATOM 8956 C THR 608 26.620 21.776 35.503 1.00 2.80 ATOM 8957 O THR 608 26.147 22.908 35.399 1.00 2.80 ATOM 8958 N PRO 609 25.821 20.700 35.459 1.00 2.44 ATOM 8959 CD PRO 609 26.277 19.341 35.155 1.00 2.44 ATOM 8962 CA PRO 609 24.375 20.810 35.485 1.00 2.44 ATOM 8964 CB PRO 609 23.914 19.530 34.762 1.00 2.44 ATOM 8967 CG PRO 609 25.006 18.492 35.060 1.00 2.44 ATOM 8970 C PRO 609 23.945 20.846 36.940 1.00 2.44 ATOM 8971 O PRO 609 23.434 19.849 37.452 1.00 2.44 ATOM 8972 N THR 610 24.151 21.983 37.615 1.00 3.11 ATOM 8974 CA THR 610 23.758 22.221 38.997 1.00 3.11 ATOM 8976 CB THR 610 24.251 23.572 39.510 1.00 3.11 ATOM 8978 OG1 THR 610 25.673 23.590 39.542 1.00 3.11 ATOM 8980 CG2 THR 610 23.737 23.883 40.934 1.00 3.11 ATOM 8984 C THR 610 22.257 22.125 39.145 1.00 3.11 ATOM 8985 O THR 610 21.752 21.452 40.044 1.00 3.11 ATOM 8986 N GLU 611 21.532 22.743 38.213 1.00 3.24 ATOM 8988 CA GLU 611 20.131 22.497 38.000 1.00 3.24 ATOM 8990 CB GLU 611 19.365 23.817 37.739 1.00 3.24 ATOM 8993 CG GLU 611 19.182 24.666 39.013 1.00 3.24 ATOM 8996 CD GLU 611 18.135 25.757 38.780 1.00 3.24 ATOM 8997 OE1 GLU 611 18.459 26.954 38.996 1.00 3.24 ATOM 8998 OE2 GLU 611 16.992 25.403 38.383 1.00 3.24 ATOM 8999 C GLU 611 20.054 21.631 36.775 1.00 3.24 ATOM 9000 O GLU 611 20.965 21.627 35.948 1.00 3.24 ATOM 9001 N VAL 612 18.962 20.875 36.639 1.00 3.45 ATOM 9003 CA VAL 612 18.765 19.985 35.517 1.00 3.45 ATOM 9005 CB VAL 612 17.835 18.815 35.832 1.00 3.45 ATOM 9007 CG1 VAL 612 17.658 17.915 34.587 1.00 3.45 ATOM 9011 CG2 VAL 612 18.433 18.016 37.011 1.00 3.45 ATOM 9015 C VAL 612 18.214 20.820 34.393 1.00 3.45 ATOM 9016 O VAL 612 17.025 21.129 34.359 1.00 3.45 ATOM 9017 N GLY 613 19.092 21.222 33.470 1.00 2.94 ATOM 9019 CA GLY 613 18.757 22.055 32.341 1.00 2.94 ATOM 9022 C GLY 613 18.037 21.252 31.308 1.00 2.94 ATOM 9023 O GLY 613 18.641 20.435 30.616 1.00 2.94 ATOM 9024 N ILE 614 16.729 21.484 31.179 1.00 3.01 ATOM 9026 CA ILE 614 15.897 20.810 30.214 1.00 3.01 ATOM 9028 CB ILE 614 14.469 20.557 30.699 1.00 3.01 ATOM 9030 CG2 ILE 614 13.695 19.774 29.609 1.00 3.01 ATOM 9034 CG1 ILE 614 14.501 19.801 32.057 1.00 3.01 ATOM 9037 CD1 ILE 614 13.119 19.485 32.639 1.00 3.01 ATOM 9041 C ILE 614 15.927 21.671 28.973 1.00 3.01 ATOM 9042 O ILE 614 15.160 22.621 28.822 1.00 3.01 ATOM 9043 N PHE 615 16.841 21.335 28.069 1.00 2.82 ATOM 9045 CA PHE 615 17.018 21.929 26.775 1.00 2.82 ATOM 9047 CB PHE 615 18.223 22.920 26.755 1.00 2.82 ATOM 9050 CG PHE 615 17.902 24.221 27.456 1.00 2.82 ATOM 9051 CD1 PHE 615 18.026 24.354 28.853 1.00 2.82 ATOM 9053 CE1 PHE 615 17.720 25.564 29.489 1.00 2.82 ATOM 9055 CZ PHE 615 17.310 26.669 28.731 1.00 2.82 ATOM 9057 CD2 PHE 615 17.516 25.349 26.708 1.00 2.82 ATOM 9059 CE2 PHE 615 17.216 26.563 27.338 1.00 2.82 ATOM 9061 C PHE 615 17.359 20.733 25.941 1.00 2.82 ATOM 9062 O PHE 615 18.032 19.817 26.414 1.00 2.82 ATOM 9063 N TRP 616 16.856 20.696 24.705 1.00 3.83 ATOM 9065 CA TRP 616 16.982 19.567 23.807 1.00 3.83 ATOM 9067 CB TRP 616 16.231 19.854 22.472 1.00 3.83 ATOM 9070 CG TRP 616 14.858 20.443 22.622 1.00 3.83 ATOM 9071 CD1 TRP 616 14.506 21.738 22.337 1.00 3.83 ATOM 9073 NE1 TRP 616 13.179 21.932 22.600 1.00 3.83 ATOM 9075 CE2 TRP 616 12.632 20.774 23.065 1.00 3.83 ATOM 9076 CD2 TRP 616 13.661 19.803 23.095 1.00 3.83 ATOM 9077 CE3 TRP 616 13.370 18.512 23.534 1.00 3.83 ATOM 9079 CZ3 TRP 616 12.062 18.213 23.929 1.00 3.83 ATOM 9081 CZ2 TRP 616 11.333 20.480 23.459 1.00 3.83 ATOM 9083 CH2 TRP 616 11.062 19.181 23.892 1.00 3.83 ATOM 9085 C TRP 616 18.432 19.258 23.491 1.00 3.83 ATOM 9086 O TRP 616 19.253 20.163 23.358 1.00 3.83 ATOM 9087 N ASN 617 18.767 17.969 23.377 1.00 4.12 ATOM 9089 CA ASN 617 20.099 17.514 23.031 1.00 4.12 ATOM 9091 CB ASN 617 20.198 15.972 23.217 1.00 4.12 ATOM 9094 CG ASN 617 21.643 15.468 23.058 1.00 4.12 ATOM 9095 OD1 ASN 617 22.608 16.201 23.298 1.00 4.12 ATOM 9096 ND2 ASN 617 21.784 14.186 22.612 1.00 4.12 ATOM 9099 C ASN 617 20.427 17.927 21.608 1.00 4.12 ATOM 9100 O ASN 617 19.647 17.688 20.688 1.00 4.12 ATOM 9101 N GLY 618 21.576 18.580 21.429 1.00 3.27 ATOM 9103 CA GLY 618 22.050 19.067 20.153 1.00 3.27 ATOM 9106 C GLY 618 21.723 20.520 19.958 1.00 3.27 ATOM 9107 O GLY 618 22.069 21.091 18.926 1.00 3.27 ATOM 9108 N ALA 619 21.065 21.157 20.934 1.00 2.29 ATOM 9110 CA ALA 619 20.797 22.580 20.932 1.00 2.29 ATOM 9112 CB ALA 619 19.842 23.016 22.060 1.00 2.29 ATOM 9116 C ALA 619 22.075 23.376 21.028 1.00 2.29 ATOM 9117 O ALA 619 23.001 23.005 21.744 1.00 2.29 ATOM 9118 N THR 620 22.145 24.481 20.289 1.00 2.06 ATOM 9120 CA THR 620 23.326 25.306 20.214 1.00 2.06 ATOM 9122 CB THR 620 24.340 24.802 19.179 1.00 2.06 ATOM 9124 OG1 THR 620 25.519 25.598 19.142 1.00 2.06 ATOM 9126 CG2 THR 620 23.725 24.730 17.763 1.00 2.06 ATOM 9130 C THR 620 22.810 26.686 19.903 1.00 2.06 ATOM 9131 O THR 620 21.736 26.849 19.325 1.00 2.06 ATOM 9132 N GLY 621 23.552 27.718 20.305 1.00 2.06 ATOM 9134 CA GLY 621 23.106 29.068 20.083 1.00 2.06 ATOM 9137 C GLY 621 23.831 29.994 20.998 1.00 2.06 ATOM 9138 O GLY 621 24.582 29.563 21.866 1.00 2.06 ATOM 9139 N LYS 622 23.633 31.297 20.803 1.00 2.14 ATOM 9141 CA LYS 622 24.232 32.345 21.598 1.00 2.14 ATOM 9143 CB LYS 622 23.986 33.729 20.949 1.00 2.14 ATOM 9146 CG LYS 622 24.589 33.883 19.540 1.00 2.14 ATOM 9149 CD LYS 622 26.085 33.531 19.467 1.00 2.14 ATOM 9152 CE LYS 622 26.723 33.845 18.106 1.00 2.14 ATOM 9155 NZ LYS 622 28.134 33.398 18.075 1.00 2.14 ATOM 9159 C LYS 622 23.776 32.364 23.040 1.00 2.14 ATOM 9160 O LYS 622 22.650 31.980 23.360 1.00 2.14 ATOM 9161 N CYS 623 24.663 32.800 23.934 1.00 1.78 ATOM 9163 CA CYS 623 24.400 32.868 25.349 1.00 1.78 ATOM 9165 CB CYS 623 24.614 31.482 26.020 1.00 1.78 ATOM 9168 SG CYS 623 26.242 30.728 25.661 1.00 1.78 ATOM 9170 C CYS 623 25.325 33.883 25.963 1.00 1.78 ATOM 9171 O CYS 623 26.305 34.301 25.347 1.00 1.78 ATOM 9172 N ILE 624 25.008 34.305 27.188 1.00 2.19 ATOM 9174 CA ILE 624 25.799 35.233 27.961 1.00 2.19 ATOM 9176 CB ILE 624 25.121 36.591 28.177 1.00 2.19 ATOM 9178 CG2 ILE 624 26.049 37.504 29.014 1.00 2.19 ATOM 9182 CG1 ILE 624 24.735 37.246 26.821 1.00 2.19 ATOM 9185 CD1 ILE 624 23.847 38.487 26.967 1.00 2.19 ATOM 9189 C ILE 624 26.003 34.538 29.280 1.00 2.19 ATOM 9190 O ILE 624 25.040 34.115 29.919 1.00 2.19 ATOM 9191 N PHE 625 27.261 34.396 29.703 1.00 2.07 ATOM 9193 CA PHE 625 27.573 33.825 30.991 1.00 2.07 ATOM 9195 CB PHE 625 28.104 32.373 30.801 1.00 2.07 ATOM 9198 CG PHE 625 28.148 31.581 32.091 1.00 2.07 ATOM 9199 CD1 PHE 625 27.091 31.624 33.021 1.00 2.07 ATOM 9201 CE1 PHE 625 27.095 30.803 34.154 1.00 2.07 ATOM 9203 CZ PHE 625 28.174 29.944 34.388 1.00 2.07 ATOM 9205 CD2 PHE 625 29.230 30.720 32.347 1.00 2.07 ATOM 9207 CE2 PHE 625 29.248 29.913 33.490 1.00 2.07 ATOM 9209 C PHE 625 28.651 34.693 31.575 1.00 2.07 ATOM 9210 O PHE 625 29.746 34.796 31.024 1.00 2.07 ATOM 9211 N GLY 626 28.349 35.347 32.701 1.00 2.82 ATOM 9213 CA GLY 626 29.272 36.193 33.435 1.00 2.82 ATOM 9216 C GLY 626 29.654 37.448 32.699 1.00 2.82 ATOM 9217 O GLY 626 30.714 38.017 32.948 1.00 2.82 ATOM 9218 N GLY 627 28.798 37.896 31.775 1.00 3.23 ATOM 9220 CA GLY 627 29.020 39.071 30.962 1.00 3.23 ATOM 9223 C GLY 627 29.962 38.808 29.816 1.00 3.23 ATOM 9224 O GLY 627 30.521 39.748 29.255 1.00 3.23 ATOM 9225 N ILE 628 30.148 37.538 29.446 1.00 3.03 ATOM 9227 CA ILE 628 31.032 37.124 28.379 1.00 3.03 ATOM 9229 CB ILE 628 32.180 36.229 28.863 1.00 3.03 ATOM 9231 CG2 ILE 628 32.983 35.645 27.677 1.00 3.03 ATOM 9235 CG1 ILE 628 33.104 36.991 29.852 1.00 3.03 ATOM 9238 CD1 ILE 628 33.797 38.225 29.256 1.00 3.03 ATOM 9242 C ILE 628 30.164 36.408 27.385 1.00 3.03 ATOM 9243 O ILE 628 29.445 35.469 27.731 1.00 3.03 ATOM 9244 N ASP 629 30.198 36.868 26.131 1.00 2.81 ATOM 9246 CA ASP 629 29.507 36.276 25.005 1.00 2.81 ATOM 9248 CB ASP 629 29.627 37.181 23.743 1.00 2.81 ATOM 9251 CG ASP 629 28.919 38.526 23.932 1.00 2.81 ATOM 9252 OD1 ASP 629 28.275 38.750 24.990 1.00 2.81 ATOM 9253 OD2 ASP 629 28.983 39.349 22.978 1.00 2.81 ATOM 9254 C ASP 629 30.091 34.924 24.667 1.00 2.81 ATOM 9255 O ASP 629 31.307 34.731 24.687 1.00 2.81 ATOM 9256 N GLY 630 29.225 33.968 24.339 1.00 2.38 ATOM 9258 CA GLY 630 29.660 32.663 23.923 1.00 2.38 ATOM 9261 C GLY 630 28.557 32.027 23.145 1.00 2.38 ATOM 9262 O GLY 630 27.504 32.620 22.913 1.00 2.38 ATOM 9263 N THR 631 28.795 30.782 22.743 1.00 2.09 ATOM 9265 CA THR 631 27.868 29.935 22.039 1.00 2.09 ATOM 9267 CB THR 631 28.291 29.663 20.597 1.00 2.09 ATOM 9269 OG1 THR 631 28.411 30.886 19.885 1.00 2.09 ATOM 9271 CG2 THR 631 27.274 28.768 19.859 1.00 2.09 ATOM 9275 C THR 631 27.909 28.650 22.826 1.00 2.09 ATOM 9276 O THR 631 28.984 28.113 23.086 1.00 2.09 ATOM 9277 N PHE 632 26.743 28.143 23.238 1.00 1.74 ATOM 9279 CA PHE 632 26.659 26.913 23.998 1.00 1.74 ATOM 9281 CB PHE 632 25.511 26.974 25.063 1.00 1.74 ATOM 9284 CG PHE 632 24.109 26.962 24.475 1.00 1.74 ATOM 9285 CD1 PHE 632 23.426 25.749 24.258 1.00 1.74 ATOM 9287 CE1 PHE 632 22.114 25.744 23.768 1.00 1.74 ATOM 9289 CZ PHE 632 21.461 26.951 23.495 1.00 1.74 ATOM 9291 CD2 PHE 632 23.430 28.164 24.217 1.00 1.74 ATOM 9293 CE2 PHE 632 22.120 28.165 23.725 1.00 1.74 ATOM 9295 C PHE 632 26.480 25.756 23.050 1.00 1.74 ATOM 9296 O PHE 632 26.164 25.933 21.876 1.00 1.74 ATOM 9297 N SER 633 26.668 24.543 23.564 1.00 2.09 ATOM 9299 CA SER 633 26.339 23.328 22.866 1.00 2.09 ATOM 9301 CB SER 633 27.570 22.765 22.105 1.00 2.09 ATOM 9304 OG SER 633 28.698 22.570 22.952 1.00 2.09 ATOM 9306 C SER 633 25.848 22.386 23.924 1.00 2.09 ATOM 9307 O SER 633 26.350 22.380 25.047 1.00 2.09 ATOM 9308 N THR 634 24.824 21.603 23.587 1.00 2.30 ATOM 9310 CA THR 634 24.156 20.699 24.492 1.00 2.30 ATOM 9312 CB THR 634 22.644 20.873 24.476 1.00 2.30 ATOM 9314 OG1 THR 634 22.313 22.234 24.722 1.00 2.30 ATOM 9316 CG2 THR 634 21.984 19.992 25.551 1.00 2.30 ATOM 9320 C THR 634 24.551 19.345 23.985 1.00 2.30 ATOM 9321 O THR 634 24.201 18.969 22.868 1.00 2.30 ATOM 9322 N THR 635 25.342 18.622 24.778 1.00 3.26 ATOM 9324 CA THR 635 25.996 17.404 24.354 1.00 3.26 ATOM 9326 CB THR 635 27.503 17.580 24.196 1.00 3.26 ATOM 9328 OG1 THR 635 27.774 18.645 23.292 1.00 3.26 ATOM 9330 CG2 THR 635 28.163 16.293 23.659 1.00 3.26 ATOM 9334 C THR 635 25.725 16.390 25.428 1.00 3.26 ATOM 9335 O THR 635 25.970 16.641 26.605 1.00 3.26 ATOM 9336 N LEU 636 25.216 15.218 25.040 1.00 3.78 ATOM 9338 CA LEU 636 25.037 14.091 25.929 1.00 3.78 ATOM 9340 CB LEU 636 24.027 13.088 25.316 1.00 3.78 ATOM 9343 CG LEU 636 23.655 11.874 26.204 1.00 3.78 ATOM 9345 CD1 LEU 636 22.824 12.295 27.429 1.00 3.78 ATOM 9349 CD2 LEU 636 22.908 10.802 25.388 1.00 3.78 ATOM 9353 C LEU 636 26.378 13.423 26.129 1.00 3.78 ATOM 9354 O LEU 636 27.052 13.078 25.159 1.00 3.78 ATOM 9355 N VAL 637 26.794 13.265 27.387 1.00 4.22 ATOM 9357 CA VAL 637 28.137 12.837 27.724 1.00 4.22 ATOM 9359 CB VAL 637 28.796 13.781 28.731 1.00 4.22 ATOM 9361 CG1 VAL 637 30.151 13.235 29.237 1.00 4.22 ATOM 9365 CG2 VAL 637 28.994 15.143 28.037 1.00 4.22 ATOM 9369 C VAL 637 28.100 11.433 28.262 1.00 4.22 ATOM 9370 O VAL 637 28.885 10.587 27.836 1.00 4.22 ATOM 9371 N ASN 638 27.177 11.152 29.185 1.00 5.04 ATOM 9373 CA ASN 638 27.092 9.859 29.823 1.00 5.04 ATOM 9375 CB ASN 638 27.237 10.010 31.365 1.00 5.04 ATOM 9378 CG ASN 638 27.489 8.659 32.055 1.00 5.04 ATOM 9379 OD1 ASN 638 27.461 7.589 31.438 1.00 5.04 ATOM 9380 ND2 ASN 638 27.762 8.728 33.391 1.00 5.04 ATOM 9383 C ASN 638 25.746 9.305 29.447 1.00 5.04 ATOM 9384 O ASN 638 24.722 9.960 29.631 1.00 5.04 ATOM 9385 N ALA 639 25.734 8.089 28.903 1.00 5.60 ATOM 9387 CA ALA 639 24.533 7.423 28.461 1.00 5.60 ATOM 9389 CB ALA 639 24.783 6.663 27.144 1.00 5.60 ATOM 9393 C ALA 639 24.081 6.427 29.504 1.00 5.60 ATOM 9394 O ALA 639 23.029 5.806 29.361 1.00 5.60 ATOM 9395 N GLY 640 24.850 6.291 30.587 1.00 6.48 ATOM 9397 CA GLY 640 24.556 5.400 31.687 1.00 6.48 ATOM 9400 C GLY 640 23.687 6.068 32.711 1.00 6.48 ATOM 9401 O GLY 640 22.990 5.390 33.461 1.00 6.48 ATOM 9402 N THR 641 23.718 7.403 32.769 1.00 5.82 ATOM 9404 CA THR 641 22.942 8.168 33.728 1.00 5.82 ATOM 9406 CB THR 641 23.806 8.843 34.796 1.00 5.82 ATOM 9408 OG1 THR 641 24.843 9.638 34.229 1.00 5.82 ATOM 9410 CG2 THR 641 24.438 7.772 35.708 1.00 5.82 ATOM 9414 C THR 641 22.144 9.235 33.015 1.00 5.82 ATOM 9415 O THR 641 21.275 9.866 33.615 1.00 5.82 ATOM 9416 N GLY 642 22.408 9.440 31.722 1.00 4.95 ATOM 9418 CA GLY 642 21.727 10.432 30.917 1.00 4.95 ATOM 9421 C GLY 642 22.200 11.833 31.204 1.00 4.95 ATOM 9422 O GLY 642 21.455 12.789 30.991 1.00 4.95 ATOM 9423 N GLU 643 23.440 11.989 31.687 1.00 4.07 ATOM 9425 CA GLU 643 24.031 13.280 31.975 1.00 4.07 ATOM 9427 CB GLU 643 25.390 13.115 32.700 1.00 4.07 ATOM 9430 CG GLU 643 26.090 14.445 33.068 1.00 4.07 ATOM 9433 CD GLU 643 27.478 14.216 33.677 1.00 4.07 ATOM 9434 OE1 GLU 643 27.890 13.036 33.836 1.00 4.07 ATOM 9435 OE2 GLU 643 28.148 15.240 33.984 1.00 4.07 ATOM 9436 C GLU 643 24.255 14.050 30.705 1.00 4.07 ATOM 9437 O GLU 643 24.982 13.606 29.817 1.00 4.07 ATOM 9438 N THR 644 23.632 15.223 30.615 1.00 3.19 ATOM 9440 CA THR 644 23.706 16.083 29.463 1.00 3.19 ATOM 9442 CB THR 644 22.341 16.469 28.916 1.00 3.19 ATOM 9444 OG1 THR 644 21.557 15.301 28.700 1.00 3.19 ATOM 9446 CG2 THR 644 22.499 17.215 27.578 1.00 3.19 ATOM 9450 C THR 644 24.441 17.283 29.977 1.00 3.19 ATOM 9451 O THR 644 24.085 17.846 31.011 1.00 3.19 ATOM 9452 N GLN 645 25.509 17.659 29.279 1.00 2.73 ATOM 9454 CA GLN 645 26.450 18.645 29.728 1.00 2.73 ATOM 9456 CB GLN 645 27.879 18.057 29.701 1.00 2.73 ATOM 9459 CG GLN 645 28.960 18.984 30.288 1.00 2.73 ATOM 9462 CD GLN 645 30.310 18.260 30.288 1.00 2.73 ATOM 9463 OE1 GLN 645 31.169 18.528 29.440 1.00 2.73 ATOM 9464 NE2 GLN 645 30.493 17.315 31.259 1.00 2.73 ATOM 9467 C GLN 645 26.362 19.794 28.771 1.00 2.73 ATOM 9468 O GLN 645 26.365 19.613 27.553 1.00 2.73 ATOM 9469 N LEU 646 26.281 21.006 29.317 1.00 2.02 ATOM 9471 CA LEU 646 26.322 22.228 28.558 1.00 2.02 ATOM 9473 CB LEU 646 25.471 23.327 29.251 1.00 2.02 ATOM 9476 CG LEU 646 23.964 22.986 29.390 1.00 2.02 ATOM 9478 CD1 LEU 646 23.245 23.983 30.322 1.00 2.02 ATOM 9482 CD2 LEU 646 23.261 22.908 28.020 1.00 2.02 ATOM 9486 C LEU 646 27.763 22.649 28.539 1.00 2.02 ATOM 9487 O LEU 646 28.425 22.653 29.574 1.00 2.02 ATOM 9488 N VAL 647 28.280 22.974 27.356 1.00 2.20 ATOM 9490 CA VAL 647 29.665 23.337 27.184 1.00 2.20 ATOM 9492 CB VAL 647 30.439 22.392 26.271 1.00 2.20 ATOM 9494 CG1 VAL 647 31.903 22.862 26.129 1.00 2.20 ATOM 9498 CG2 VAL 647 30.367 20.966 26.860 1.00 2.20 ATOM 9502 C VAL 647 29.639 24.730 26.630 1.00 2.20 ATOM 9503 O VAL 647 29.052 24.983 25.578 1.00 2.20 ATOM 9504 N PHE 648 30.273 25.660 27.347 1.00 2.02 ATOM 9506 CA PHE 648 30.375 27.046 26.975 1.00 2.02 ATOM 9508 CB PHE 648 30.501 27.925 28.254 1.00 2.02 ATOM 9511 CG PHE 648 30.545 29.404 27.937 1.00 2.02 ATOM 9512 CD1 PHE 648 29.356 30.148 27.850 1.00 2.02 ATOM 9514 CE1 PHE 648 29.393 31.524 27.588 1.00 2.02 ATOM 9516 CZ PHE 648 30.623 32.167 27.409 1.00 2.02 ATOM 9518 CD2 PHE 648 31.774 30.065 27.758 1.00 2.02 ATOM 9520 CE2 PHE 648 31.813 31.437 27.483 1.00 2.02 ATOM 9522 C PHE 648 31.604 27.175 26.117 1.00 2.02 ATOM 9523 O PHE 648 32.691 26.782 26.529 1.00 2.02 ATOM 9524 N THR 649 31.444 27.725 24.914 1.00 2.52 ATOM 9526 CA THR 649 32.531 27.973 23.994 1.00 2.52 ATOM 9528 CB THR 649 32.366 27.262 22.660 1.00 2.52 ATOM 9530 OG1 THR 649 32.165 25.871 22.884 1.00 2.52 ATOM 9532 CG2 THR 649 33.615 27.455 21.774 1.00 2.52 ATOM 9536 C THR 649 32.496 29.460 23.800 1.00 2.52 ATOM 9537 O THR 649 31.430 30.044 23.627 1.00 2.52 ATOM 9538 N ARG 650 33.658 30.107 23.872 1.00 2.91 ATOM 9540 CA ARG 650 33.761 31.546 23.855 1.00 2.91 ATOM 9542 CB ARG 650 34.980 31.977 24.701 1.00 2.91 ATOM 9545 CG ARG 650 35.055 33.481 25.001 1.00 2.91 ATOM 9548 CD ARG 650 36.164 33.807 26.010 1.00 2.91 ATOM 9551 NE ARG 650 36.280 35.294 26.142 1.00 2.91 ATOM 9553 CZ ARG 650 36.920 35.897 27.170 1.00 2.91 ATOM 9554 NH1 ARG 650 36.975 37.245 27.213 1.00 2.91 ATOM 9557 NH2 ARG 650 37.505 35.194 28.157 1.00 2.91 ATOM 9560 C ARG 650 33.890 32.017 22.426 1.00 2.91 ATOM 9561 O ARG 650 34.541 31.374 21.605 1.00 2.91 ATOM 9562 N ASP 651 33.251 33.148 22.108 1.00 3.42 ATOM 9564 CA ASP 651 33.154 33.681 20.760 1.00 3.42 ATOM 9566 CB ASP 651 31.782 34.394 20.569 1.00 3.42 ATOM 9569 CG ASP 651 30.616 33.405 20.571 1.00 3.42 ATOM 9570 OD1 ASP 651 30.842 32.168 20.540 1.00 3.42 ATOM 9571 OD2 ASP 651 29.457 33.899 20.548 1.00 3.42 ATOM 9572 C ASP 651 34.212 34.731 20.520 1.00 3.42 ATOM 9573 O ASP 651 34.243 35.365 19.465 1.00 3.42 ATOM 9574 N SER 652 35.094 34.936 21.494 1.00 4.23 ATOM 9576 CA SER 652 36.077 35.986 21.464 1.00 4.23 ATOM 9578 CB SER 652 35.601 37.209 22.303 1.00 4.23 ATOM 9581 OG SER 652 35.215 36.849 23.629 1.00 4.23 ATOM 9583 C SER 652 37.365 35.440 22.010 1.00 4.23 ATOM 9584 O SER 652 37.389 34.400 22.668 1.00 4.23 ATOM 9585 N ALA 653 38.462 36.143 21.735 1.00 4.51 ATOM 9587 CA ALA 653 39.752 35.881 22.314 1.00 4.51 ATOM 9589 CB ALA 653 40.862 35.692 21.262 1.00 4.51 ATOM 9593 C ALA 653 40.033 37.104 23.136 1.00 4.51 ATOM 9594 O ALA 653 40.129 38.210 22.606 1.00 4.51 ATOM 9595 N GLY 654 40.115 36.927 24.453 1.00 4.71 ATOM 9597 CA GLY 654 40.245 38.016 25.386 1.00 4.71 ATOM 9600 C GLY 654 41.069 37.540 26.533 1.00 4.71 ATOM 9601 O GLY 654 42.049 36.823 26.348 1.00 4.71 ATOM 9602 N SER 655 40.683 37.942 27.743 1.00 4.68 ATOM 9604 CA SER 655 41.334 37.553 28.970 1.00 4.68 ATOM 9606 CB SER 655 41.726 38.796 29.806 1.00 4.68 ATOM 9609 OG SER 655 42.647 39.609 29.089 1.00 4.68 ATOM 9611 C SER 655 40.331 36.752 29.743 1.00 4.68 ATOM 9612 O SER 655 39.138 37.054 29.716 1.00 4.68 ATOM 9613 N ALA 656 40.797 35.696 30.415 1.00 4.13 ATOM 9615 CA ALA 656 39.989 34.788 31.200 1.00 4.13 ATOM 9617 CB ALA 656 40.822 33.629 31.779 1.00 4.13 ATOM 9621 C ALA 656 39.271 35.486 32.335 1.00 4.13 ATOM 9622 O ALA 656 39.807 36.411 32.944 1.00 4.13 ATOM 9623 N VAL 657 38.038 35.057 32.614 1.00 3.79 ATOM 9625 CA VAL 657 37.182 35.666 33.606 1.00 3.79 ATOM 9627 CB VAL 657 35.913 36.275 33.016 1.00 3.79 ATOM 9629 CG1 VAL 657 34.967 36.792 34.125 1.00 3.79 ATOM 9633 CG2 VAL 657 36.329 37.423 32.074 1.00 3.79 ATOM 9637 C VAL 657 36.833 34.583 34.580 1.00 3.79 ATOM 9638 O VAL 657 36.255 33.564 34.209 1.00 3.79 ATOM 9639 N SER 658 37.177 34.792 35.852 1.00 3.89 ATOM 9641 CA SER 658 36.854 33.887 36.930 1.00 3.89 ATOM 9643 CB SER 658 37.787 34.147 38.142 1.00 3.89 ATOM 9646 OG SER 658 37.578 33.213 39.198 1.00 3.89 ATOM 9648 C SER 658 35.414 34.108 37.318 1.00 3.89 ATOM 9649 O SER 658 35.022 35.221 37.667 1.00 3.89 ATOM 9650 N VAL 659 34.609 33.047 37.254 1.00 3.44 ATOM 9652 CA VAL 659 33.228 33.073 37.668 1.00 3.44 ATOM 9654 CB VAL 659 32.250 32.717 36.548 1.00 3.44 ATOM 9656 CG1 VAL 659 30.803 32.638 37.085 1.00 3.44 ATOM 9660 CG2 VAL 659 32.371 33.771 35.426 1.00 3.44 ATOM 9664 C VAL 659 33.177 32.064 38.779 1.00 3.44 ATOM 9665 O VAL 659 33.284 30.860 38.550 1.00 3.44 ATOM 9666 N SER 660 33.034 32.551 40.010 1.00 3.78 ATOM 9668 CA SER 660 33.045 31.735 41.199 1.00 3.78 ATOM 9670 CB SER 660 33.740 32.483 42.369 1.00 3.78 ATOM 9673 OG SER 660 33.192 33.782 42.586 1.00 3.78 ATOM 9675 C SER 660 31.634 31.379 41.566 1.00 3.78 ATOM 9676 O SER 660 30.752 32.237 41.558 1.00 3.78 ATOM 9677 N THR 661 31.411 30.103 41.893 1.00 3.54 ATOM 9679 CA THR 661 30.127 29.513 42.224 1.00 3.54 ATOM 9681 CB THR 661 29.586 29.897 43.611 1.00 3.54 ATOM 9683 OG1 THR 661 29.123 31.242 43.680 1.00 3.54 ATOM 9685 CG2 THR 661 30.679 29.672 44.678 1.00 3.54 ATOM 9689 C THR 661 29.114 29.671 41.100 1.00 3.54 ATOM 9690 O THR 661 29.470 29.916 39.947 1.00 3.54 ATOM 9691 N THR 662 27.833 29.471 41.414 1.00 2.83 ATOM 9693 CA THR 662 26.725 29.637 40.501 1.00 2.83 ATOM 9695 CB THR 662 25.395 29.150 41.060 1.00 2.83 ATOM 9697 OG1 THR 662 25.206 29.592 42.402 1.00 2.83 ATOM 9699 CG2 THR 662 25.386 27.607 41.033 1.00 2.83 ATOM 9703 C THR 662 26.570 31.052 39.998 1.00 2.83 ATOM 9704 O THR 662 26.791 32.018 40.726 1.00 2.83 ATOM 9705 N ALA 663 26.159 31.177 38.739 1.00 2.57 ATOM 9707 CA ALA 663 25.793 32.424 38.129 1.00 2.57 ATOM 9709 CB ALA 663 26.925 33.045 37.287 1.00 2.57 ATOM 9713 C ALA 663 24.638 32.063 37.246 1.00 2.57 ATOM 9714 O ALA 663 24.434 30.895 36.915 1.00 2.57 ATOM 9715 N THR 664 23.841 33.062 36.862 1.00 2.26 ATOM 9717 CA THR 664 22.712 32.862 35.981 1.00 2.26 ATOM 9719 CB THR 664 21.710 34.009 36.008 1.00 2.26 ATOM 9721 OG1 THR 664 21.236 34.206 37.333 1.00 2.26 ATOM 9723 CG2 THR 664 20.507 33.695 35.095 1.00 2.26 ATOM 9727 C THR 664 23.250 32.688 34.587 1.00 2.26 ATOM 9728 O THR 664 23.923 33.573 34.060 1.00 2.26 ATOM 9729 N PHE 665 22.970 31.534 33.977 1.00 1.71 ATOM 9731 CA PHE 665 23.404 31.249 32.634 1.00 1.71 ATOM 9733 CB PHE 665 23.728 29.735 32.485 1.00 1.71 ATOM 9736 CG PHE 665 24.317 29.363 31.140 1.00 1.71 ATOM 9737 CD1 PHE 665 25.060 30.265 30.354 1.00 1.71 ATOM 9739 CE1 PHE 665 25.639 29.855 29.149 1.00 1.71 ATOM 9741 CZ PHE 665 25.470 28.542 28.699 1.00 1.71 ATOM 9743 CD2 PHE 665 24.151 28.046 30.669 1.00 1.71 ATOM 9745 CE2 PHE 665 24.716 27.639 29.454 1.00 1.71 ATOM 9747 C PHE 665 22.268 31.646 31.748 1.00 1.71 ATOM 9748 O PHE 665 21.267 30.937 31.650 1.00 1.71 ATOM 9749 N ALA 666 22.404 32.800 31.098 1.00 1.94 ATOM 9751 CA ALA 666 21.368 33.351 30.274 1.00 1.94 ATOM 9753 CB ALA 666 21.436 34.889 30.205 1.00 1.94 ATOM 9757 C ALA 666 21.526 32.780 28.896 1.00 1.94 ATOM 9758 O ALA 666 22.256 33.307 28.058 1.00 1.94 ATOM 9759 N MET 667 20.824 31.677 28.646 1.00 1.98 ATOM 9761 CA MET 667 20.756 31.026 27.367 1.00 1.98 ATOM 9763 CB MET 667 20.441 29.517 27.549 1.00 1.98 ATOM 9766 CG MET 667 21.481 28.771 28.413 1.00 1.98 ATOM 9769 SD MET 667 21.042 27.053 28.840 1.00 1.98 ATOM 9770 CE MET 667 21.214 26.314 27.191 1.00 1.98 ATOM 9774 C MET 667 19.626 31.693 26.643 1.00 1.98 ATOM 9775 O MET 667 18.606 32.024 27.243 1.00 1.98 ATOM 9776 N ARG 668 19.784 31.914 25.335 1.00 2.37 ATOM 9778 CA ARG 668 18.713 32.430 24.508 1.00 2.37 ATOM 9780 CB ARG 668 19.221 32.742 23.073 1.00 2.37 ATOM 9783 CG ARG 668 19.528 31.532 22.165 1.00 2.37 ATOM 9786 CD ARG 668 19.894 31.950 20.733 1.00 2.37 ATOM 9789 NE ARG 668 20.020 30.714 19.897 1.00 2.37 ATOM 9791 CZ ARG 668 20.228 30.735 18.559 1.00 2.37 ATOM 9792 NH1 ARG 668 20.343 29.564 17.895 1.00 2.37 ATOM 9795 NH2 ARG 668 20.329 31.892 17.876 1.00 2.37 ATOM 9798 C ARG 668 17.610 31.397 24.439 1.00 2.37 ATOM 9799 O ARG 668 17.905 30.211 24.597 1.00 2.37 TER END