####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 563), selected 80 , name T1052TS336_1-D3 # Molecule2: number of CA atoms 80 ( 563), selected 80 , name T1052-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS336_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 2.10 2.10 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 593 - 659 1.99 2.13 LCS_AVERAGE: 79.91 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 590 - 608 0.96 2.76 LCS_AVERAGE: 17.75 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 589 T 589 7 22 80 3 11 22 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 590 R 590 19 22 80 5 27 47 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT Q 591 Q 591 19 22 80 5 19 45 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT Y 592 Y 592 19 46 80 5 19 43 59 70 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 593 A 593 19 67 80 5 19 45 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 594 P 594 19 67 80 7 31 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 595 V 595 19 67 80 7 31 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 596 G 596 19 67 80 5 27 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 597 G 597 19 67 80 6 30 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 598 S 598 19 67 80 6 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 599 I 599 19 67 80 8 26 47 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 600 P 600 19 67 80 8 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 601 A 601 19 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 602 S 602 19 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 603 G 603 19 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 604 S 604 19 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 605 V 605 19 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 606 A 606 19 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 607 L 607 19 67 80 8 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 608 T 608 19 67 80 5 27 47 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT P 609 P 609 16 67 80 2 9 44 59 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 610 T 610 4 67 80 1 4 6 6 31 55 63 71 78 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT E 611 E 611 4 67 80 3 4 11 22 41 56 64 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 612 V 612 5 67 80 3 6 10 17 36 54 64 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 613 G 613 5 67 80 3 4 9 21 39 54 64 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 614 I 614 5 67 80 3 6 19 25 54 65 73 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 615 F 615 5 67 80 3 6 38 60 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT W 616 W 616 5 67 80 3 25 45 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT N 617 N 617 14 67 80 3 7 45 55 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 618 G 618 16 67 80 3 25 44 60 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 619 A 619 18 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 620 T 620 18 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 621 G 621 18 67 80 4 29 46 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT K 622 K 622 18 67 80 6 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT C 623 C 623 18 67 80 12 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 624 I 624 18 67 80 9 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 625 F 625 18 67 80 7 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 626 G 626 18 67 80 3 18 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 627 G 627 18 67 80 11 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT I 628 I 628 18 67 80 12 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT D 629 D 629 18 67 80 12 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 630 G 630 18 67 80 7 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 631 T 631 18 67 80 8 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 632 F 632 18 67 80 8 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 633 S 633 18 67 80 7 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 634 T 634 18 67 80 7 31 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 635 T 635 18 67 80 5 31 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 636 L 636 18 67 80 5 31 45 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 637 V 637 16 67 80 4 29 47 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT N 638 N 638 16 67 80 3 26 46 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 639 A 639 16 67 80 7 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 640 G 640 16 67 80 7 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 641 T 641 16 67 80 3 11 43 57 68 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 642 G 642 16 67 80 3 11 41 59 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT E 643 E 643 16 67 80 7 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 644 T 644 16 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT Q 645 Q 645 16 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT L 646 L 646 16 67 80 6 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 647 V 647 16 67 80 8 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 648 F 648 16 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 649 T 649 14 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 650 R 650 14 67 80 6 27 47 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT D 651 D 651 14 67 80 7 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 652 S 652 12 67 80 4 19 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 653 A 653 12 67 80 5 19 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT G 654 G 654 12 67 80 3 6 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 655 S 655 9 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 656 A 656 9 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 657 V 657 9 67 80 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 658 S 658 7 67 80 8 31 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT V 659 V 659 7 67 80 3 10 28 58 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT S 660 S 660 7 57 80 3 5 10 31 48 64 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 661 T 661 7 57 80 2 5 19 48 63 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 662 T 662 6 57 80 3 11 37 60 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 663 A 663 6 57 80 5 18 47 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT T 664 T 664 6 57 80 5 19 47 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT F 665 F 665 6 57 80 3 29 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT A 666 A 666 6 57 80 4 27 45 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT M 667 M 667 6 57 80 5 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_GDT R 668 R 668 4 57 80 7 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 LCS_AVERAGE LCS_A: 65.89 ( 17.75 79.91 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 32 48 61 71 73 74 75 79 80 80 80 80 80 80 80 80 80 80 80 GDT PERCENT_AT 18.75 40.00 60.00 76.25 88.75 91.25 92.50 93.75 98.75 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.63 1.00 1.22 1.46 1.52 1.56 1.63 2.00 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 GDT RMS_ALL_AT 2.20 2.21 2.15 2.18 2.14 2.15 2.15 2.15 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 # Checking swapping # possible swapping detected: Y 592 Y 592 # possible swapping detected: F 615 F 615 # possible swapping detected: F 632 F 632 # possible swapping detected: D 651 D 651 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA T 589 T 589 2.073 0 0.727 0.827 5.142 51.818 30.649 4.657 LGA R 590 R 590 1.701 0 0.108 1.101 5.619 58.182 43.967 5.619 LGA Q 591 Q 591 2.090 0 0.122 1.149 5.152 41.364 30.909 5.152 LGA Y 592 Y 592 2.474 0 0.191 0.466 3.221 30.455 30.455 2.606 LGA A 593 A 593 2.007 0 0.083 0.104 2.277 51.818 49.091 - LGA P 594 P 594 0.994 0 0.155 0.209 1.863 77.727 68.312 1.863 LGA V 595 V 595 0.917 0 0.687 0.701 3.453 61.818 70.390 0.572 LGA G 596 G 596 1.194 0 0.056 0.056 1.308 65.455 65.455 - LGA G 597 G 597 1.087 0 0.310 0.310 1.795 65.909 65.909 - LGA S 598 S 598 1.300 0 0.161 0.305 2.450 59.091 54.242 2.450 LGA I 599 I 599 1.794 0 0.051 0.513 3.475 54.545 45.455 3.475 LGA P 600 P 600 1.294 0 0.045 0.115 2.047 61.818 57.403 1.573 LGA A 601 A 601 0.869 0 0.106 0.112 0.997 81.818 81.818 - LGA S 602 S 602 0.737 0 0.045 0.579 2.237 81.818 74.545 2.237 LGA G 603 G 603 0.958 0 0.075 0.075 1.303 77.727 77.727 - LGA S 604 S 604 0.673 0 0.039 0.062 1.067 77.727 79.091 0.595 LGA V 605 V 605 0.680 0 0.044 0.054 0.731 81.818 81.818 0.719 LGA A 606 A 606 0.318 0 0.080 0.084 0.448 100.000 100.000 - LGA L 607 L 607 0.576 0 0.167 0.374 1.581 74.545 76.591 1.581 LGA T 608 T 608 1.709 0 0.124 1.002 3.344 51.364 43.117 3.344 LGA P 609 P 609 2.547 0 0.066 0.346 4.991 30.000 19.221 4.991 LGA T 610 T 610 6.443 0 0.557 0.584 9.966 0.455 0.260 9.966 LGA E 611 E 611 6.172 0 0.118 0.678 7.413 0.000 0.000 6.289 LGA V 612 V 612 5.756 0 0.062 0.193 6.255 0.455 0.260 6.255 LGA G 613 G 613 5.981 0 0.624 0.624 6.036 3.182 3.182 - LGA I 614 I 614 4.718 0 0.213 1.159 10.220 7.727 3.864 10.220 LGA F 615 F 615 2.422 0 0.537 0.433 3.195 30.455 32.727 2.881 LGA W 616 W 616 2.297 0 0.073 1.091 3.918 41.364 28.961 3.918 LGA N 617 N 617 2.784 0 0.479 0.683 7.615 45.455 22.955 7.615 LGA G 618 G 618 2.234 0 0.278 0.278 2.234 51.818 51.818 - LGA A 619 A 619 0.389 0 0.051 0.062 1.339 82.727 79.273 - LGA T 620 T 620 0.407 0 0.110 1.046 2.588 95.455 78.182 2.147 LGA G 621 G 621 1.743 0 0.073 0.073 1.743 65.909 65.909 - LGA K 622 K 622 1.335 0 0.072 1.432 6.095 61.818 45.253 6.095 LGA C 623 C 623 0.864 0 0.102 0.700 4.084 77.727 63.636 4.084 LGA I 624 I 624 0.899 0 0.110 0.142 1.740 70.000 71.818 0.971 LGA F 625 F 625 0.488 0 0.083 0.098 0.990 90.909 86.777 0.663 LGA G 626 G 626 1.470 0 0.080 0.080 1.712 61.818 61.818 - LGA G 627 G 627 0.625 0 0.159 0.159 0.625 81.818 81.818 - LGA I 628 I 628 0.851 0 0.030 0.049 1.197 81.818 77.727 1.003 LGA D 629 D 629 1.064 0 0.077 0.864 3.653 69.545 53.864 3.653 LGA G 630 G 630 1.242 0 0.094 0.094 1.242 65.455 65.455 - LGA T 631 T 631 1.270 0 0.129 0.986 2.842 65.455 57.922 2.842 LGA F 632 F 632 1.046 0 0.048 1.201 8.125 73.636 34.876 8.125 LGA S 633 S 633 0.794 0 0.115 0.642 3.440 77.727 65.758 3.440 LGA T 634 T 634 1.373 0 0.093 0.965 4.313 55.000 44.935 4.313 LGA T 635 T 635 1.388 0 0.149 1.099 3.288 69.545 58.961 3.288 LGA L 636 L 636 1.814 0 0.040 1.356 5.874 47.727 29.318 3.655 LGA V 637 V 637 1.587 0 0.629 1.328 4.887 52.273 44.935 4.887 LGA N 638 N 638 1.931 0 0.205 0.909 6.306 47.727 27.500 6.306 LGA A 639 A 639 1.378 0 0.609 0.558 4.329 43.636 51.273 - LGA G 640 G 640 1.386 0 0.040 0.040 2.926 53.182 53.182 - LGA T 641 T 641 3.304 0 0.132 0.147 4.184 18.636 16.883 2.727 LGA G 642 G 642 2.722 0 0.063 0.063 2.904 30.000 30.000 - LGA E 643 E 643 1.593 0 0.063 0.356 4.241 70.909 46.061 4.241 LGA T 644 T 644 0.647 0 0.050 1.240 3.452 77.727 65.974 1.658 LGA Q 645 Q 645 0.458 0 0.052 1.016 2.723 100.000 72.121 2.222 LGA L 646 L 646 0.763 0 0.040 0.232 1.720 81.818 72.045 1.720 LGA V 647 V 647 0.783 0 0.058 0.061 1.079 81.818 79.481 0.844 LGA F 648 F 648 0.823 0 0.038 0.663 2.320 81.818 62.479 1.942 LGA T 649 T 649 0.839 0 0.097 0.131 1.019 77.727 79.481 0.648 LGA R 650 R 650 1.719 0 0.133 1.302 3.332 61.818 50.909 1.502 LGA D 651 D 651 0.935 0 0.040 0.845 2.501 73.636 61.136 2.501 LGA S 652 S 652 1.562 0 0.045 0.693 2.353 62.273 56.364 1.731 LGA A 653 A 653 1.733 0 0.484 0.547 3.344 42.727 44.364 - LGA G 654 G 654 1.598 0 0.316 0.316 2.478 51.364 51.364 - LGA S 655 S 655 1.228 0 0.141 0.562 1.845 65.909 60.909 1.845 LGA A 656 A 656 1.091 0 0.045 0.042 1.108 65.455 65.455 - LGA V 657 V 657 1.153 0 0.058 1.080 3.636 73.636 62.338 3.636 LGA S 658 S 658 0.870 0 0.130 0.565 2.618 77.727 70.000 2.618 LGA V 659 V 659 2.421 0 0.154 0.227 3.610 35.909 29.870 3.610 LGA S 660 S 660 4.284 0 0.570 0.547 6.616 4.545 3.030 5.459 LGA T 661 T 661 3.331 0 0.274 1.035 5.986 18.636 12.468 4.774 LGA T 662 T 662 2.281 0 0.585 0.615 3.853 31.818 36.364 1.614 LGA A 663 A 663 1.607 0 0.080 0.098 1.607 58.182 56.727 - LGA T 664 T 664 1.660 0 0.068 0.831 3.509 58.182 49.610 1.267 LGA F 665 F 665 1.073 0 0.214 1.420 4.695 61.818 48.595 4.302 LGA A 666 A 666 2.310 0 0.326 0.359 2.645 41.364 38.545 - LGA M 667 M 667 1.526 0 0.076 0.181 2.571 66.364 52.500 2.571 LGA R 668 R 668 0.377 0 0.034 1.044 4.785 90.909 61.983 4.785 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 80 320 320 100.00 563 563 100.00 80 59 SUMMARY(RMSD_GDC): 2.096 2.076 2.693 58.392 51.593 29.060 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 75 1.63 77.500 83.496 4.343 LGA_LOCAL RMSD: 1.627 Number of atoms: 75 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.148 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 2.096 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.690866 * X + -0.722793 * Y + 0.016578 * Z + 24.512789 Y_new = 0.659519 * X + 0.620660 * Y + -0.424048 * Z + 36.703079 Z_new = 0.296209 * X + 0.303894 * Y + 0.905488 * Z + 4.978849 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.762189 -0.300721 0.323801 [DEG: 43.6702 -17.2301 18.5524 ] ZXZ: 0.039075 0.438268 0.772594 [DEG: 2.2389 25.1109 44.2664 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1052TS336_1-D3 REMARK 2: T1052-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS336_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 75 1.63 83.496 2.10 REMARK ---------------------------------------------------------- MOLECULE T1052TS336_1-D3 PFRMAT TS TARGET T1052 MODEL 1 PARENT N/A ATOM 4412 N THR 589 17.182 31.748 33.869 1.00 0.00 ATOM 4413 CA THR 589 17.523 31.267 35.194 1.00 0.00 ATOM 4414 CB THR 589 16.236 31.087 36.022 1.00 0.00 ATOM 4415 OG1 THR 589 15.210 30.650 35.137 1.00 0.00 ATOM 4416 CG2 THR 589 15.831 32.385 36.704 1.00 0.00 ATOM 4417 C THR 589 18.381 30.011 35.228 1.00 0.00 ATOM 4418 O THR 589 18.673 29.491 36.309 1.00 0.00 ATOM 4419 N ARG 590 18.814 29.500 34.069 1.00 0.00 ATOM 4420 CA ARG 590 19.633 28.297 34.041 1.00 0.00 ATOM 4421 CB ARG 590 19.776 27.743 32.624 1.00 0.00 ATOM 4422 CG ARG 590 18.459 27.338 31.971 1.00 0.00 ATOM 4423 CD ARG 590 17.675 26.367 32.840 1.00 0.00 ATOM 4424 NE ARG 590 16.356 26.103 32.289 1.00 0.00 ATOM 4425 CZ ARG 590 15.295 25.886 33.068 1.00 0.00 ATOM 4426 NH1 ARG 590 15.311 26.114 34.375 1.00 0.00 ATOM 4427 NH2 ARG 590 14.203 25.372 32.524 1.00 0.00 ATOM 4428 C ARG 590 21.000 28.539 34.660 1.00 0.00 ATOM 4429 O ARG 590 21.604 29.597 34.465 1.00 0.00 ATOM 4430 N GLN 591 21.470 27.572 35.451 1.00 0.00 ATOM 4431 CA GLN 591 22.720 27.700 36.183 1.00 0.00 ATOM 4432 CB GLN 591 22.468 27.910 37.677 1.00 0.00 ATOM 4433 CG GLN 591 21.751 29.200 38.044 1.00 0.00 ATOM 4434 CD GLN 591 21.382 29.289 39.516 1.00 0.00 ATOM 4435 OE1 GLN 591 20.644 28.467 40.052 1.00 0.00 ATOM 4436 NE2 GLN 591 21.883 30.279 40.239 1.00 0.00 ATOM 4437 C GLN 591 23.533 26.432 35.976 1.00 0.00 ATOM 4438 O GLN 591 23.241 25.361 36.523 1.00 0.00 ATOM 4439 N TYR 592 24.554 26.543 35.135 1.00 0.00 ATOM 4440 CA TYR 592 25.408 25.415 34.807 1.00 0.00 ATOM 4441 CB TYR 592 25.363 25.082 33.304 1.00 0.00 ATOM 4442 CG TYR 592 24.062 24.525 32.715 1.00 0.00 ATOM 4443 CD1 TYR 592 22.842 25.151 32.898 1.00 0.00 ATOM 4444 CE1 TYR 592 21.693 24.631 32.336 1.00 0.00 ATOM 4445 CD2 TYR 592 24.119 23.380 31.949 1.00 0.00 ATOM 4446 CE2 TYR 592 22.975 22.859 31.375 1.00 0.00 ATOM 4447 CZ TYR 592 21.763 23.481 31.580 1.00 0.00 ATOM 4448 OH TYR 592 20.613 22.943 31.022 1.00 0.00 ATOM 4449 C TYR 592 26.810 25.834 35.232 1.00 0.00 ATOM 4450 O TYR 592 27.419 26.738 34.658 1.00 0.00 ATOM 4451 N ALA 593 27.294 25.182 36.287 1.00 0.00 ATOM 4452 CA ALA 593 28.536 25.532 36.955 1.00 0.00 ATOM 4453 CB ALA 593 28.646 24.706 38.229 1.00 0.00 ATOM 4454 C ALA 593 29.809 25.296 36.147 1.00 0.00 ATOM 4455 O ALA 593 30.026 24.182 35.666 1.00 0.00 ATOM 4456 N PRO 594 30.681 26.298 35.959 1.00 0.00 ATOM 4457 CD PRO 594 30.441 27.689 36.336 1.00 0.00 ATOM 4458 CA PRO 594 31.955 26.148 35.260 1.00 0.00 ATOM 4459 CB PRO 594 32.444 27.580 35.152 1.00 0.00 ATOM 4460 CG PRO 594 31.834 28.283 36.341 1.00 0.00 ATOM 4461 C PRO 594 32.954 25.242 35.970 1.00 0.00 ATOM 4462 O PRO 594 33.440 25.571 37.056 1.00 0.00 ATOM 4463 N VAL 595 33.311 24.115 35.341 1.00 0.00 ATOM 4464 CA VAL 595 34.187 23.115 35.957 1.00 0.00 ATOM 4465 CB VAL 595 34.413 21.880 35.048 1.00 0.00 ATOM 4466 CG1 VAL 595 33.103 21.153 34.803 1.00 0.00 ATOM 4467 CG2 VAL 595 35.097 22.226 33.730 1.00 0.00 ATOM 4468 C VAL 595 35.536 23.623 36.463 1.00 0.00 ATOM 4469 O VAL 595 36.089 23.102 37.431 1.00 0.00 ATOM 4470 N GLY 596 36.073 24.654 35.805 1.00 0.00 ATOM 4471 CA GLY 596 37.336 25.242 36.212 1.00 0.00 ATOM 4472 C GLY 596 37.175 26.491 37.069 1.00 0.00 ATOM 4473 O GLY 596 38.162 26.974 37.623 1.00 0.00 ATOM 4474 N GLY 597 35.968 27.055 37.214 1.00 0.00 ATOM 4475 CA GLY 597 35.787 28.360 37.845 1.00 0.00 ATOM 4476 C GLY 597 36.298 29.497 36.967 1.00 0.00 ATOM 4477 O GLY 597 35.540 30.352 36.500 1.00 0.00 ATOM 4478 N SER 598 37.612 29.516 36.747 1.00 0.00 ATOM 4479 CA SER 598 38.234 30.403 35.788 1.00 0.00 ATOM 4480 CB SER 598 39.705 30.567 36.148 1.00 0.00 ATOM 4481 OG SER 598 40.323 29.299 36.334 1.00 0.00 ATOM 4482 C SER 598 38.079 29.847 34.378 1.00 0.00 ATOM 4483 O SER 598 38.714 28.853 34.010 1.00 0.00 ATOM 4484 N ILE 599 37.187 30.465 33.608 1.00 0.00 ATOM 4485 CA ILE 599 37.020 30.169 32.194 1.00 0.00 ATOM 4486 CB ILE 599 35.690 30.793 31.666 1.00 0.00 ATOM 4487 CG2 ILE 599 35.591 30.758 30.151 1.00 0.00 ATOM 4488 CG1 ILE 599 34.443 30.121 32.228 1.00 0.00 ATOM 4489 CD1 ILE 599 34.030 30.533 33.644 1.00 0.00 ATOM 4490 C ILE 599 38.240 30.710 31.444 1.00 0.00 ATOM 4491 O ILE 599 38.657 31.844 31.704 1.00 0.00 ATOM 4492 N PRO 600 38.871 29.936 30.543 1.00 0.00 ATOM 4493 CD PRO 600 38.592 28.520 30.322 1.00 0.00 ATOM 4494 CA PRO 600 39.992 30.380 29.719 1.00 0.00 ATOM 4495 CB PRO 600 40.393 29.110 28.989 1.00 0.00 ATOM 4496 CG PRO 600 39.117 28.310 28.915 1.00 0.00 ATOM 4497 C PRO 600 39.679 31.516 28.752 1.00 0.00 ATOM 4498 O PRO 600 38.522 31.827 28.462 1.00 0.00 ATOM 4499 N ALA 601 40.745 32.132 28.231 1.00 0.00 ATOM 4500 CA ALA 601 40.641 33.259 27.313 1.00 0.00 ATOM 4501 CB ALA 601 42.020 33.879 27.138 1.00 0.00 ATOM 4502 C ALA 601 40.112 32.932 25.922 1.00 0.00 ATOM 4503 O ALA 601 39.722 33.820 25.164 1.00 0.00 ATOM 4504 N SER 602 40.117 31.649 25.561 1.00 0.00 ATOM 4505 CA SER 602 39.624 31.185 24.278 1.00 0.00 ATOM 4506 CB SER 602 40.639 31.454 23.168 1.00 0.00 ATOM 4507 OG SER 602 40.040 31.264 21.892 1.00 0.00 ATOM 4508 C SER 602 39.369 29.688 24.409 1.00 0.00 ATOM 4509 O SER 602 39.644 29.085 25.453 1.00 0.00 ATOM 4510 N GLY 603 38.855 29.080 23.341 1.00 0.00 ATOM 4511 CA GLY 603 38.495 27.673 23.353 1.00 0.00 ATOM 4512 C GLY 603 37.171 27.430 24.060 1.00 0.00 ATOM 4513 O GLY 603 36.236 28.231 23.973 1.00 0.00 ATOM 4514 N SER 604 37.131 26.332 24.812 1.00 0.00 ATOM 4515 CA SER 604 35.887 25.821 25.353 1.00 0.00 ATOM 4516 CB SER 604 35.398 24.667 24.484 1.00 0.00 ATOM 4517 OG SER 604 35.210 25.039 23.124 1.00 0.00 ATOM 4518 C SER 604 36.065 25.330 26.783 1.00 0.00 ATOM 4519 O SER 604 37.159 24.903 27.165 1.00 0.00 ATOM 4520 N VAL 605 35.001 25.392 27.585 1.00 0.00 ATOM 4521 CA VAL 605 35.008 24.877 28.948 1.00 0.00 ATOM 4522 CB VAL 605 35.346 26.019 29.951 1.00 0.00 ATOM 4523 CG1 VAL 605 34.273 27.094 30.006 1.00 0.00 ATOM 4524 CG2 VAL 605 35.655 25.485 31.342 1.00 0.00 ATOM 4525 C VAL 605 33.665 24.209 29.240 1.00 0.00 ATOM 4526 O VAL 605 32.632 24.588 28.678 1.00 0.00 ATOM 4527 N ALA 606 33.679 23.185 30.095 1.00 0.00 ATOM 4528 CA ALA 606 32.469 22.465 30.454 1.00 0.00 ATOM 4529 CB ALA 606 32.804 21.026 30.817 1.00 0.00 ATOM 4530 C ALA 606 31.741 23.090 31.635 1.00 0.00 ATOM 4531 O ALA 606 32.342 23.660 32.555 1.00 0.00 ATOM 4532 N LEU 607 30.417 22.981 31.581 1.00 0.00 ATOM 4533 CA LEU 607 29.529 23.567 32.564 1.00 0.00 ATOM 4534 CB LEU 607 28.745 24.699 31.909 1.00 0.00 ATOM 4535 CG LEU 607 29.503 25.840 31.240 1.00 0.00 ATOM 4536 CD1 LEU 607 28.615 26.554 30.256 1.00 0.00 ATOM 4537 CD2 LEU 607 30.067 26.812 32.250 1.00 0.00 ATOM 4538 C LEU 607 28.581 22.483 33.060 1.00 0.00 ATOM 4539 O LEU 607 27.730 21.978 32.319 1.00 0.00 ATOM 4540 N THR 608 28.756 22.098 34.325 1.00 0.00 ATOM 4541 CA THR 608 27.970 21.046 34.953 1.00 0.00 ATOM 4542 CB THR 608 28.771 20.453 36.130 1.00 0.00 ATOM 4543 OG1 THR 608 30.102 20.273 35.658 1.00 0.00 ATOM 4544 CG2 THR 608 28.217 19.118 36.607 1.00 0.00 ATOM 4545 C THR 608 26.640 21.613 35.453 1.00 0.00 ATOM 4546 O THR 608 26.654 22.580 36.214 1.00 0.00 ATOM 4547 N PRO 609 25.464 21.094 35.077 1.00 0.00 ATOM 4548 CD PRO 609 25.310 19.934 34.210 1.00 0.00 ATOM 4549 CA PRO 609 24.163 21.621 35.486 1.00 0.00 ATOM 4550 CB PRO 609 23.187 20.731 34.752 1.00 0.00 ATOM 4551 CG PRO 609 23.960 20.192 33.581 1.00 0.00 ATOM 4552 C PRO 609 23.893 21.537 36.981 1.00 0.00 ATOM 4553 O PRO 609 24.216 20.538 37.629 1.00 0.00 ATOM 4554 N THR 610 23.330 22.602 37.550 1.00 0.00 ATOM 4555 CA THR 610 22.655 22.472 38.833 1.00 0.00 ATOM 4556 CB THR 610 22.802 23.734 39.717 1.00 0.00 ATOM 4557 OG1 THR 610 22.291 24.836 38.979 1.00 0.00 ATOM 4558 CG2 THR 610 24.248 23.989 40.117 1.00 0.00 ATOM 4559 C THR 610 21.200 22.162 38.495 1.00 0.00 ATOM 4560 O THR 610 20.639 21.134 38.878 1.00 0.00 ATOM 4561 N GLU 611 20.602 23.075 37.729 1.00 0.00 ATOM 4562 CA GLU 611 19.329 22.835 37.079 1.00 0.00 ATOM 4563 CB GLU 611 18.350 23.986 37.338 1.00 0.00 ATOM 4564 CG GLU 611 18.861 25.417 37.140 1.00 0.00 ATOM 4565 CD GLU 611 17.761 26.455 37.291 1.00 0.00 ATOM 4566 OE1 GLU 611 17.188 26.841 36.268 1.00 0.00 ATOM 4567 OE2 GLU 611 17.452 26.846 38.414 1.00 0.00 ATOM 4568 C GLU 611 19.528 22.592 35.590 1.00 0.00 ATOM 4569 O GLU 611 20.241 23.338 34.912 1.00 0.00 ATOM 4570 N VAL 612 18.933 21.511 35.085 1.00 0.00 ATOM 4571 CA VAL 612 18.958 21.197 33.663 1.00 0.00 ATOM 4572 CB VAL 612 18.939 19.667 33.406 1.00 0.00 ATOM 4573 CG1 VAL 612 19.095 19.363 31.920 1.00 0.00 ATOM 4574 CG2 VAL 612 20.014 18.932 34.189 1.00 0.00 ATOM 4575 C VAL 612 17.704 21.816 33.064 1.00 0.00 ATOM 4576 O VAL 612 16.618 21.681 33.638 1.00 0.00 ATOM 4577 N GLY 613 17.825 22.499 31.928 1.00 0.00 ATOM 4578 CA GLY 613 16.647 23.017 31.256 1.00 0.00 ATOM 4579 C GLY 613 16.792 23.021 29.749 1.00 0.00 ATOM 4580 O GLY 613 17.109 22.002 29.137 1.00 0.00 ATOM 4581 N ILE 614 16.639 24.212 29.163 1.00 0.00 ATOM 4582 CA ILE 614 16.543 24.418 27.718 1.00 0.00 ATOM 4583 CB ILE 614 16.405 25.948 27.463 1.00 0.00 ATOM 4584 CG2 ILE 614 17.656 26.694 27.927 1.00 0.00 ATOM 4585 CG1 ILE 614 16.049 26.278 26.013 1.00 0.00 ATOM 4586 CD1 ILE 614 15.745 27.763 25.742 1.00 0.00 ATOM 4587 C ILE 614 17.635 23.775 26.854 1.00 0.00 ATOM 4588 O ILE 614 17.422 23.441 25.690 1.00 0.00 ATOM 4589 N PHE 615 18.810 23.549 27.445 1.00 0.00 ATOM 4590 CA PHE 615 19.939 22.948 26.754 1.00 0.00 ATOM 4591 CB PHE 615 21.209 23.329 27.509 1.00 0.00 ATOM 4592 CG PHE 615 21.486 24.829 27.503 1.00 0.00 ATOM 4593 CD1 PHE 615 21.281 25.570 28.652 1.00 0.00 ATOM 4594 CD2 PHE 615 21.943 25.446 26.353 1.00 0.00 ATOM 4595 CE1 PHE 615 21.542 26.924 28.652 1.00 0.00 ATOM 4596 CE2 PHE 615 22.203 26.801 26.363 1.00 0.00 ATOM 4597 CZ PHE 615 22.006 27.540 27.510 1.00 0.00 ATOM 4598 C PHE 615 19.849 21.433 26.554 1.00 0.00 ATOM 4599 O PHE 615 20.674 20.828 25.859 1.00 0.00 ATOM 4600 N TRP 616 18.831 20.798 27.149 1.00 0.00 ATOM 4601 CA TRP 616 18.612 19.361 27.052 1.00 0.00 ATOM 4602 CB TRP 616 17.382 18.988 27.901 1.00 0.00 ATOM 4603 CG TRP 616 17.058 17.501 27.990 1.00 0.00 ATOM 4604 CD2 TRP 616 17.765 16.521 28.639 1.00 0.00 ATOM 4605 CE2 TRP 616 17.068 15.400 28.311 1.00 0.00 ATOM 4606 CE3 TRP 616 19.039 16.461 29.149 1.00 0.00 ATOM 4607 CD1 TRP 616 15.972 16.968 27.325 1.00 0.00 ATOM 4608 NE1 TRP 616 16.018 15.668 27.530 1.00 0.00 ATOM 4609 CZ2 TRP 616 17.569 14.130 28.456 1.00 0.00 ATOM 4610 CZ3 TRP 616 19.560 15.191 29.334 1.00 0.00 ATOM 4611 CH2 TRP 616 18.843 14.048 28.994 1.00 0.00 ATOM 4612 C TRP 616 18.473 18.848 25.618 1.00 0.00 ATOM 4613 O TRP 616 18.070 19.564 24.701 1.00 0.00 ATOM 4614 N ASN 617 18.848 17.573 25.453 1.00 0.00 ATOM 4615 CA ASN 617 18.857 16.859 24.178 1.00 0.00 ATOM 4616 CB ASN 617 17.435 16.704 23.614 1.00 0.00 ATOM 4617 CG ASN 617 17.268 15.514 22.678 1.00 0.00 ATOM 4618 OD1 ASN 617 16.706 14.490 23.055 1.00 0.00 ATOM 4619 ND2 ASN 617 17.739 15.565 21.439 1.00 0.00 ATOM 4620 C ASN 617 19.829 17.464 23.163 1.00 0.00 ATOM 4621 O ASN 617 19.604 17.485 21.951 1.00 0.00 ATOM 4622 N GLY 618 20.946 17.967 23.696 1.00 0.00 ATOM 4623 CA GLY 618 22.063 18.426 22.888 1.00 0.00 ATOM 4624 C GLY 618 21.783 19.726 22.154 1.00 0.00 ATOM 4625 O GLY 618 22.101 19.862 20.970 1.00 0.00 ATOM 4626 N ALA 619 21.191 20.708 22.839 1.00 0.00 ATOM 4627 CA ALA 619 20.878 21.967 22.186 1.00 0.00 ATOM 4628 CB ALA 619 19.824 22.726 22.975 1.00 0.00 ATOM 4629 C ALA 619 22.093 22.870 22.034 1.00 0.00 ATOM 4630 O ALA 619 22.836 23.129 22.986 1.00 0.00 ATOM 4631 N THR 620 22.345 23.271 20.789 1.00 0.00 ATOM 4632 CA THR 620 23.193 24.418 20.509 1.00 0.00 ATOM 4633 CB THR 620 23.614 24.417 19.030 1.00 0.00 ATOM 4634 OG1 THR 620 24.160 23.129 18.762 1.00 0.00 ATOM 4635 CG2 THR 620 24.673 25.461 18.728 1.00 0.00 ATOM 4636 C THR 620 22.393 25.674 20.838 1.00 0.00 ATOM 4637 O THR 620 21.251 25.835 20.390 1.00 0.00 ATOM 4638 N GLY 621 22.986 26.575 21.617 1.00 0.00 ATOM 4639 CA GLY 621 22.267 27.719 22.138 1.00 0.00 ATOM 4640 C GLY 621 23.157 28.945 22.228 1.00 0.00 ATOM 4641 O GLY 621 24.381 28.891 22.066 1.00 0.00 ATOM 4642 N LYS 622 22.506 30.069 22.501 1.00 0.00 ATOM 4643 CA LYS 622 23.188 31.342 22.574 1.00 0.00 ATOM 4644 CB LYS 622 22.679 32.270 21.480 1.00 0.00 ATOM 4645 CG LYS 622 23.646 32.392 20.311 1.00 0.00 ATOM 4646 CD LYS 622 25.017 32.881 20.773 1.00 0.00 ATOM 4647 CE LYS 622 24.931 34.220 21.503 1.00 0.00 ATOM 4648 NZ LYS 622 26.231 34.697 21.932 1.00 0.00 ATOM 4649 C LYS 622 23.025 32.014 23.920 1.00 0.00 ATOM 4650 O LYS 622 21.912 32.089 24.443 1.00 0.00 ATOM 4651 N CYS 623 24.120 32.534 24.486 1.00 0.00 ATOM 4652 CA CYS 623 24.083 33.106 25.820 1.00 0.00 ATOM 4653 CB CYS 623 23.995 31.990 26.862 1.00 0.00 ATOM 4654 SG CYS 623 23.895 32.584 28.567 1.00 0.00 ATOM 4655 C CYS 623 25.265 34.011 26.140 1.00 0.00 ATOM 4656 O CYS 623 26.350 33.942 25.551 1.00 0.00 ATOM 4657 N ILE 624 24.988 34.897 27.093 1.00 0.00 ATOM 4658 CA ILE 624 25.982 35.747 27.714 1.00 0.00 ATOM 4659 CB ILE 624 25.443 37.197 27.796 1.00 0.00 ATOM 4660 CG2 ILE 624 26.562 38.118 28.239 1.00 0.00 ATOM 4661 CG1 ILE 624 24.869 37.705 26.479 1.00 0.00 ATOM 4662 CD1 ILE 624 24.070 39.019 26.607 1.00 0.00 ATOM 4663 C ILE 624 26.164 35.153 29.111 1.00 0.00 ATOM 4664 O ILE 624 25.334 35.353 30.005 1.00 0.00 ATOM 4665 N PHE 625 27.235 34.391 29.338 1.00 0.00 ATOM 4666 CA PHE 625 27.436 33.761 30.632 1.00 0.00 ATOM 4667 CB PHE 625 28.266 32.479 30.517 1.00 0.00 ATOM 4668 CG PHE 625 28.417 31.697 31.821 1.00 0.00 ATOM 4669 CD1 PHE 625 27.337 31.494 32.663 1.00 0.00 ATOM 4670 CD2 PHE 625 29.651 31.177 32.158 1.00 0.00 ATOM 4671 CE1 PHE 625 27.497 30.773 33.826 1.00 0.00 ATOM 4672 CE2 PHE 625 29.801 30.454 33.323 1.00 0.00 ATOM 4673 CZ PHE 625 28.727 30.250 34.157 1.00 0.00 ATOM 4674 C PHE 625 28.083 34.763 31.574 1.00 0.00 ATOM 4675 O PHE 625 29.264 35.104 31.460 1.00 0.00 ATOM 4676 N GLY 626 27.231 35.307 32.445 1.00 0.00 ATOM 4677 CA GLY 626 27.649 36.207 33.514 1.00 0.00 ATOM 4678 C GLY 626 28.387 37.455 33.036 1.00 0.00 ATOM 4679 O GLY 626 29.211 38.014 33.758 1.00 0.00 ATOM 4680 N GLY 627 28.101 37.903 31.810 1.00 0.00 ATOM 4681 CA GLY 627 28.798 39.041 31.233 1.00 0.00 ATOM 4682 C GLY 627 29.585 38.670 29.983 1.00 0.00 ATOM 4683 O GLY 627 29.718 39.486 29.072 1.00 0.00 ATOM 4684 N ILE 628 30.093 37.438 29.889 1.00 0.00 ATOM 4685 CA ILE 628 30.926 37.048 28.762 1.00 0.00 ATOM 4686 CB ILE 628 32.060 36.111 29.240 1.00 0.00 ATOM 4687 CG2 ILE 628 32.955 35.691 28.080 1.00 0.00 ATOM 4688 CG1 ILE 628 32.894 36.748 30.352 1.00 0.00 ATOM 4689 CD1 ILE 628 33.646 38.051 29.991 1.00 0.00 ATOM 4690 C ILE 628 30.090 36.403 27.664 1.00 0.00 ATOM 4691 O ILE 628 29.320 35.470 27.909 1.00 0.00 ATOM 4692 N ASP 629 30.217 36.906 26.433 1.00 0.00 ATOM 4693 CA ASP 629 29.497 36.338 25.304 1.00 0.00 ATOM 4694 CB ASP 629 29.398 37.308 24.127 1.00 0.00 ATOM 4695 CG ASP 629 28.456 36.777 23.055 1.00 0.00 ATOM 4696 OD1 ASP 629 27.242 36.906 23.246 1.00 0.00 ATOM 4697 OD2 ASP 629 28.904 36.209 22.059 1.00 0.00 ATOM 4698 C ASP 629 30.128 35.049 24.805 1.00 0.00 ATOM 4699 O ASP 629 31.304 35.005 24.431 1.00 0.00 ATOM 4700 N GLY 630 29.308 34.004 24.754 1.00 0.00 ATOM 4701 CA GLY 630 29.774 32.742 24.224 1.00 0.00 ATOM 4702 C GLY 630 28.831 32.193 23.172 1.00 0.00 ATOM 4703 O GLY 630 27.743 32.714 22.928 1.00 0.00 ATOM 4704 N THR 631 29.294 31.111 22.558 1.00 0.00 ATOM 4705 CA THR 631 28.508 30.340 21.618 1.00 0.00 ATOM 4706 CB THR 631 29.230 30.377 20.255 1.00 0.00 ATOM 4707 OG1 THR 631 29.440 31.760 19.951 1.00 0.00 ATOM 4708 CG2 THR 631 28.411 29.726 19.153 1.00 0.00 ATOM 4709 C THR 631 28.483 28.952 22.259 1.00 0.00 ATOM 4710 O THR 631 29.529 28.386 22.594 1.00 0.00 ATOM 4711 N PHE 632 27.288 28.411 22.509 1.00 0.00 ATOM 4712 CA PHE 632 27.150 27.250 23.375 1.00 0.00 ATOM 4713 CB PHE 632 26.225 27.578 24.548 1.00 0.00 ATOM 4714 CG PHE 632 26.763 28.600 25.537 1.00 0.00 ATOM 4715 CD1 PHE 632 26.757 29.944 25.223 1.00 0.00 ATOM 4716 CD2 PHE 632 27.242 28.174 26.757 1.00 0.00 ATOM 4717 CE1 PHE 632 27.237 30.858 26.132 1.00 0.00 ATOM 4718 CE2 PHE 632 27.708 29.101 27.663 1.00 0.00 ATOM 4719 CZ PHE 632 27.705 30.441 27.355 1.00 0.00 ATOM 4720 C PHE 632 26.581 26.044 22.649 1.00 0.00 ATOM 4721 O PHE 632 25.820 26.186 21.690 1.00 0.00 ATOM 4722 N SER 633 26.935 24.839 23.095 1.00 0.00 ATOM 4723 CA SER 633 26.284 23.623 22.630 1.00 0.00 ATOM 4724 CB SER 633 26.929 23.089 21.353 1.00 0.00 ATOM 4725 OG SER 633 26.093 22.137 20.704 1.00 0.00 ATOM 4726 C SER 633 26.383 22.597 23.748 1.00 0.00 ATOM 4727 O SER 633 27.330 22.624 24.541 1.00 0.00 ATOM 4728 N THR 634 25.420 21.682 23.851 1.00 0.00 ATOM 4729 CA THR 634 25.319 20.849 25.040 1.00 0.00 ATOM 4730 CB THR 634 23.913 20.974 25.643 1.00 0.00 ATOM 4731 OG1 THR 634 23.578 22.356 25.603 1.00 0.00 ATOM 4732 CG2 THR 634 23.884 20.525 27.093 1.00 0.00 ATOM 4733 C THR 634 25.664 19.395 24.750 1.00 0.00 ATOM 4734 O THR 634 25.114 18.780 23.836 1.00 0.00 ATOM 4735 N THR 635 26.573 18.827 25.539 1.00 0.00 ATOM 4736 CA THR 635 27.038 17.469 25.314 1.00 0.00 ATOM 4737 CB THR 635 28.571 17.423 25.465 1.00 0.00 ATOM 4738 OG1 THR 635 29.069 18.421 24.582 1.00 0.00 ATOM 4739 CG2 THR 635 29.167 16.073 25.085 1.00 0.00 ATOM 4740 C THR 635 26.347 16.504 26.269 1.00 0.00 ATOM 4741 O THR 635 26.556 16.535 27.486 1.00 0.00 ATOM 4742 N LEU 636 25.491 15.651 25.702 1.00 0.00 ATOM 4743 CA LEU 636 24.836 14.585 26.450 1.00 0.00 ATOM 4744 CB LEU 636 23.736 13.947 25.609 1.00 0.00 ATOM 4745 CG LEU 636 22.583 14.806 25.101 1.00 0.00 ATOM 4746 CD1 LEU 636 21.737 14.015 24.121 1.00 0.00 ATOM 4747 CD2 LEU 636 21.731 15.319 26.247 1.00 0.00 ATOM 4748 C LEU 636 25.861 13.524 26.825 1.00 0.00 ATOM 4749 O LEU 636 26.574 13.008 25.962 1.00 0.00 ATOM 4750 N VAL 637 25.958 13.188 28.112 1.00 0.00 ATOM 4751 CA VAL 637 27.020 12.319 28.604 1.00 0.00 ATOM 4752 CB VAL 637 28.167 13.095 29.309 1.00 0.00 ATOM 4753 CG1 VAL 637 29.111 13.712 28.291 1.00 0.00 ATOM 4754 CG2 VAL 637 27.652 14.195 30.224 1.00 0.00 ATOM 4755 C VAL 637 26.490 11.226 29.518 1.00 0.00 ATOM 4756 O VAL 637 25.463 11.384 30.174 1.00 0.00 ATOM 4757 N ASN 638 27.216 10.103 29.559 1.00 0.00 ATOM 4758 CA ASN 638 26.871 8.928 30.357 1.00 0.00 ATOM 4759 CB ASN 638 27.074 9.176 31.862 1.00 0.00 ATOM 4760 CG ASN 638 28.519 9.447 32.259 1.00 0.00 ATOM 4761 OD1 ASN 638 29.463 8.909 31.684 1.00 0.00 ATOM 4762 ND2 ASN 638 28.761 10.297 33.243 1.00 0.00 ATOM 4763 C ASN 638 25.481 8.365 30.066 1.00 0.00 ATOM 4764 O ASN 638 24.547 8.426 30.876 1.00 0.00 ATOM 4765 N ALA 639 25.362 7.803 28.860 1.00 0.00 ATOM 4766 CA ALA 639 24.110 7.250 28.362 1.00 0.00 ATOM 4767 CB ALA 639 24.333 6.636 26.987 1.00 0.00 ATOM 4768 C ALA 639 23.542 6.176 29.282 1.00 0.00 ATOM 4769 O ALA 639 24.127 5.113 29.497 1.00 0.00 ATOM 4770 N GLY 640 22.399 6.522 29.867 1.00 0.00 ATOM 4771 CA GLY 640 21.797 5.716 30.911 1.00 0.00 ATOM 4772 C GLY 640 21.401 6.592 32.088 1.00 0.00 ATOM 4773 O GLY 640 20.314 6.441 32.641 1.00 0.00 ATOM 4774 N THR 641 22.269 7.537 32.465 1.00 0.00 ATOM 4775 CA THR 641 21.982 8.441 33.574 1.00 0.00 ATOM 4776 CB THR 641 23.271 9.087 34.131 1.00 0.00 ATOM 4777 OG1 THR 641 23.844 9.867 33.083 1.00 0.00 ATOM 4778 CG2 THR 641 24.262 8.060 34.656 1.00 0.00 ATOM 4779 C THR 641 21.003 9.541 33.178 1.00 0.00 ATOM 4780 O THR 641 20.116 9.933 33.937 1.00 0.00 ATOM 4781 N GLY 642 21.196 10.038 31.955 1.00 0.00 ATOM 4782 CA GLY 642 20.497 11.216 31.478 1.00 0.00 ATOM 4783 C GLY 642 21.263 12.484 31.837 1.00 0.00 ATOM 4784 O GLY 642 20.686 13.567 31.935 1.00 0.00 ATOM 4785 N GLU 643 22.576 12.358 32.060 1.00 0.00 ATOM 4786 CA GLU 643 23.424 13.511 32.308 1.00 0.00 ATOM 4787 CB GLU 643 24.740 13.035 32.913 1.00 0.00 ATOM 4788 CG GLU 643 25.587 14.105 33.598 1.00 0.00 ATOM 4789 CD GLU 643 27.024 13.686 33.887 1.00 0.00 ATOM 4790 OE1 GLU 643 27.261 12.560 34.333 1.00 0.00 ATOM 4791 OE2 GLU 643 27.923 14.494 33.649 1.00 0.00 ATOM 4792 C GLU 643 23.692 14.264 31.008 1.00 0.00 ATOM 4793 O GLU 643 23.716 13.709 29.906 1.00 0.00 ATOM 4794 N THR 644 23.898 15.568 31.150 1.00 0.00 ATOM 4795 CA THR 644 24.307 16.416 30.048 1.00 0.00 ATOM 4796 CB THR 644 23.059 17.037 29.372 1.00 0.00 ATOM 4797 OG1 THR 644 23.521 17.572 28.141 1.00 0.00 ATOM 4798 CG2 THR 644 22.333 18.106 30.184 1.00 0.00 ATOM 4799 C THR 644 25.227 17.457 30.668 1.00 0.00 ATOM 4800 O THR 644 25.107 17.740 31.864 1.00 0.00 ATOM 4801 N GLN 645 26.191 17.992 29.922 1.00 0.00 ATOM 4802 CA GLN 645 27.014 19.097 30.380 1.00 0.00 ATOM 4803 CB GLN 645 28.381 18.652 30.904 1.00 0.00 ATOM 4804 CG GLN 645 28.304 17.991 32.275 1.00 0.00 ATOM 4805 CD GLN 645 29.645 17.798 32.959 1.00 0.00 ATOM 4806 OE1 GLN 645 30.351 18.756 33.264 1.00 0.00 ATOM 4807 NE2 GLN 645 30.025 16.570 33.283 1.00 0.00 ATOM 4808 C GLN 645 27.190 20.078 29.235 1.00 0.00 ATOM 4809 O GLN 645 27.416 19.694 28.086 1.00 0.00 ATOM 4810 N LEU 646 27.062 21.364 29.550 1.00 0.00 ATOM 4811 CA LEU 646 27.078 22.394 28.527 1.00 0.00 ATOM 4812 CB LEU 646 26.229 23.561 29.012 1.00 0.00 ATOM 4813 CG LEU 646 26.060 24.836 28.199 1.00 0.00 ATOM 4814 CD1 LEU 646 25.543 24.579 26.800 1.00 0.00 ATOM 4815 CD2 LEU 646 25.109 25.748 28.940 1.00 0.00 ATOM 4816 C LEU 646 28.499 22.821 28.202 1.00 0.00 ATOM 4817 O LEU 646 29.356 22.890 29.084 1.00 0.00 ATOM 4818 N VAL 647 28.776 23.072 26.925 1.00 0.00 ATOM 4819 CA VAL 647 30.086 23.536 26.508 1.00 0.00 ATOM 4820 CB VAL 647 30.620 22.699 25.321 1.00 0.00 ATOM 4821 CG1 VAL 647 31.998 23.170 24.884 1.00 0.00 ATOM 4822 CG2 VAL 647 30.704 21.225 25.695 1.00 0.00 ATOM 4823 C VAL 647 29.991 25.013 26.157 1.00 0.00 ATOM 4824 O VAL 647 29.290 25.424 25.226 1.00 0.00 ATOM 4825 N PHE 648 30.696 25.809 26.959 1.00 0.00 ATOM 4826 CA PHE 648 30.863 27.229 26.713 1.00 0.00 ATOM 4827 CB PHE 648 31.192 27.919 28.045 1.00 0.00 ATOM 4828 CG PHE 648 31.395 29.434 28.102 1.00 0.00 ATOM 4829 CD1 PHE 648 31.234 30.264 27.002 1.00 0.00 ATOM 4830 CD2 PHE 648 31.746 29.990 29.316 1.00 0.00 ATOM 4831 CE1 PHE 648 31.427 31.622 27.126 1.00 0.00 ATOM 4832 CE2 PHE 648 31.933 31.351 29.432 1.00 0.00 ATOM 4833 CZ PHE 648 31.772 32.170 28.339 1.00 0.00 ATOM 4834 C PHE 648 32.034 27.353 25.752 1.00 0.00 ATOM 4835 O PHE 648 33.148 26.955 26.090 1.00 0.00 ATOM 4836 N THR 649 31.797 27.866 24.547 1.00 0.00 ATOM 4837 CA THR 649 32.901 28.231 23.677 1.00 0.00 ATOM 4838 CB THR 649 32.721 27.590 22.293 1.00 0.00 ATOM 4839 OG1 THR 649 32.659 26.193 22.571 1.00 0.00 ATOM 4840 CG2 THR 649 33.862 27.877 21.328 1.00 0.00 ATOM 4841 C THR 649 32.973 29.747 23.630 1.00 0.00 ATOM 4842 O THR 649 31.966 30.432 23.420 1.00 0.00 ATOM 4843 N ARG 650 34.174 30.276 23.875 1.00 0.00 ATOM 4844 CA ARG 650 34.401 31.709 23.939 1.00 0.00 ATOM 4845 CB ARG 650 35.828 31.998 24.396 1.00 0.00 ATOM 4846 CG ARG 650 36.214 31.554 25.807 1.00 0.00 ATOM 4847 CD ARG 650 35.428 32.269 26.897 1.00 0.00 ATOM 4848 NE ARG 650 35.425 33.710 26.721 1.00 0.00 ATOM 4849 CZ ARG 650 36.329 34.540 27.243 1.00 0.00 ATOM 4850 NH1 ARG 650 37.317 34.160 28.047 1.00 0.00 ATOM 4851 NH2 ARG 650 36.255 35.798 26.857 1.00 0.00 ATOM 4852 C ARG 650 34.188 32.356 22.576 1.00 0.00 ATOM 4853 O ARG 650 34.918 32.051 21.629 1.00 0.00 ATOM 4854 N ASP 651 33.185 33.224 22.438 1.00 0.00 ATOM 4855 CA ASP 651 32.974 33.887 21.154 1.00 0.00 ATOM 4856 CB ASP 651 31.521 34.261 20.919 1.00 0.00 ATOM 4857 CG ASP 651 31.266 34.665 19.470 1.00 0.00 ATOM 4858 OD1 ASP 651 31.232 35.857 19.173 1.00 0.00 ATOM 4859 OD2 ASP 651 31.086 33.771 18.636 1.00 0.00 ATOM 4860 C ASP 651 33.844 35.122 21.010 1.00 0.00 ATOM 4861 O ASP 651 34.280 35.453 19.910 1.00 0.00 ATOM 4862 N SER 652 34.071 35.832 22.118 1.00 0.00 ATOM 4863 CA SER 652 34.988 36.954 22.137 1.00 0.00 ATOM 4864 CB SER 652 34.224 38.272 22.138 1.00 0.00 ATOM 4865 OG SER 652 35.109 39.375 21.990 1.00 0.00 ATOM 4866 C SER 652 35.832 36.821 23.396 1.00 0.00 ATOM 4867 O SER 652 35.343 36.385 24.442 1.00 0.00 ATOM 4868 N ALA 653 37.100 37.223 23.277 1.00 0.00 ATOM 4869 CA ALA 653 38.106 36.918 24.277 1.00 0.00 ATOM 4870 CB ALA 653 39.432 36.644 23.574 1.00 0.00 ATOM 4871 C ALA 653 38.325 37.965 25.370 1.00 0.00 ATOM 4872 O ALA 653 37.778 37.839 26.466 1.00 0.00 ATOM 4873 N GLY 654 39.108 39.024 25.140 1.00 0.00 ATOM 4874 CA GLY 654 39.470 39.952 26.205 1.00 0.00 ATOM 4875 C GLY 654 40.479 39.322 27.154 1.00 0.00 ATOM 4876 O GLY 654 41.674 39.619 27.092 1.00 0.00 ATOM 4877 N SER 655 40.014 38.410 28.013 1.00 0.00 ATOM 4878 CA SER 655 40.864 37.733 28.973 1.00 0.00 ATOM 4879 CB SER 655 41.081 38.633 30.200 1.00 0.00 ATOM 4880 OG SER 655 39.895 38.903 30.940 1.00 0.00 ATOM 4881 C SER 655 40.243 36.405 29.398 1.00 0.00 ATOM 4882 O SER 655 39.174 36.001 28.930 1.00 0.00 ATOM 4883 N ALA 656 40.954 35.689 30.273 1.00 0.00 ATOM 4884 CA ALA 656 40.342 34.644 31.080 1.00 0.00 ATOM 4885 CB ALA 656 41.429 33.867 31.804 1.00 0.00 ATOM 4886 C ALA 656 39.454 35.299 32.132 1.00 0.00 ATOM 4887 O ALA 656 39.661 36.468 32.485 1.00 0.00 ATOM 4888 N VAL 657 38.455 34.580 32.643 1.00 0.00 ATOM 4889 CA VAL 657 37.491 35.164 33.560 1.00 0.00 ATOM 4890 CB VAL 657 36.338 35.818 32.744 1.00 0.00 ATOM 4891 CG1 VAL 657 35.616 34.826 31.835 1.00 0.00 ATOM 4892 CG2 VAL 657 35.374 36.570 33.648 1.00 0.00 ATOM 4893 C VAL 657 36.998 34.140 34.575 1.00 0.00 ATOM 4894 O VAL 657 36.582 33.039 34.217 1.00 0.00 ATOM 4895 N SER 658 37.070 34.469 35.864 1.00 0.00 ATOM 4896 CA SER 658 36.571 33.572 36.891 1.00 0.00 ATOM 4897 CB SER 658 37.402 33.714 38.164 1.00 0.00 ATOM 4898 OG SER 658 37.218 32.631 39.067 1.00 0.00 ATOM 4899 C SER 658 35.110 33.916 37.134 1.00 0.00 ATOM 4900 O SER 658 34.793 34.978 37.675 1.00 0.00 ATOM 4901 N VAL 659 34.205 33.033 36.711 1.00 0.00 ATOM 4902 CA VAL 659 32.779 33.304 36.842 1.00 0.00 ATOM 4903 CB VAL 659 32.029 33.070 35.500 1.00 0.00 ATOM 4904 CG1 VAL 659 30.558 33.442 35.592 1.00 0.00 ATOM 4905 CG2 VAL 659 32.630 33.907 34.382 1.00 0.00 ATOM 4906 C VAL 659 32.233 32.436 37.970 1.00 0.00 ATOM 4907 O VAL 659 32.721 31.332 38.223 1.00 0.00 ATOM 4908 N SER 660 31.230 32.949 38.681 1.00 0.00 ATOM 4909 CA SER 660 30.629 32.262 39.807 1.00 0.00 ATOM 4910 CB SER 660 29.722 33.246 40.542 1.00 0.00 ATOM 4911 OG SER 660 29.070 34.133 39.639 1.00 0.00 ATOM 4912 C SER 660 29.880 30.987 39.439 1.00 0.00 ATOM 4913 O SER 660 29.160 30.912 38.441 1.00 0.00 ATOM 4914 N THR 661 30.066 29.976 40.291 1.00 0.00 ATOM 4915 CA THR 661 29.480 28.649 40.157 1.00 0.00 ATOM 4916 CB THR 661 29.762 27.915 41.484 1.00 0.00 ATOM 4917 OG1 THR 661 31.142 28.145 41.754 1.00 0.00 ATOM 4918 CG2 THR 661 29.486 26.419 41.436 1.00 0.00 ATOM 4919 C THR 661 27.985 28.651 39.832 1.00 0.00 ATOM 4920 O THR 661 27.523 27.926 38.953 1.00 0.00 ATOM 4921 N THR 662 27.213 29.485 40.526 1.00 0.00 ATOM 4922 CA THR 662 25.788 29.602 40.280 1.00 0.00 ATOM 4923 CB THR 662 25.079 29.580 41.650 1.00 0.00 ATOM 4924 OG1 THR 662 25.800 30.477 42.494 1.00 0.00 ATOM 4925 CG2 THR 662 25.008 28.183 42.248 1.00 0.00 ATOM 4926 C THR 662 25.397 30.814 39.435 1.00 0.00 ATOM 4927 O THR 662 24.339 31.415 39.653 1.00 0.00 ATOM 4928 N ALA 663 26.228 31.228 38.470 1.00 0.00 ATOM 4929 CA ALA 663 25.860 32.328 37.589 1.00 0.00 ATOM 4930 CB ALA 663 27.070 32.831 36.823 1.00 0.00 ATOM 4931 C ALA 663 24.797 31.931 36.573 1.00 0.00 ATOM 4932 O ALA 663 24.789 30.821 36.037 1.00 0.00 ATOM 4933 N THR 664 23.874 32.861 36.341 1.00 0.00 ATOM 4934 CA THR 664 22.753 32.649 35.446 1.00 0.00 ATOM 4935 CB THR 664 21.581 33.545 35.883 1.00 0.00 ATOM 4936 OG1 THR 664 22.135 34.777 36.346 1.00 0.00 ATOM 4937 CG2 THR 664 20.747 32.887 36.969 1.00 0.00 ATOM 4938 C THR 664 23.070 32.832 33.969 1.00 0.00 ATOM 4939 O THR 664 23.888 33.665 33.561 1.00 0.00 ATOM 4940 N PHE 665 22.417 32.006 33.155 1.00 0.00 ATOM 4941 CA PHE 665 22.549 32.095 31.713 1.00 0.00 ATOM 4942 CB PHE 665 22.317 30.733 31.066 1.00 0.00 ATOM 4943 CG PHE 665 23.544 29.850 31.202 1.00 0.00 ATOM 4944 CD1 PHE 665 23.798 29.191 32.386 1.00 0.00 ATOM 4945 CD2 PHE 665 24.440 29.764 30.159 1.00 0.00 ATOM 4946 CE1 PHE 665 24.965 28.483 32.537 1.00 0.00 ATOM 4947 CE2 PHE 665 25.604 29.049 30.323 1.00 0.00 ATOM 4948 CZ PHE 665 25.870 28.411 31.510 1.00 0.00 ATOM 4949 C PHE 665 21.683 33.162 31.071 1.00 0.00 ATOM 4950 O PHE 665 20.498 32.970 30.787 1.00 0.00 ATOM 4951 N ALA 666 22.294 34.319 30.813 1.00 0.00 ATOM 4952 CA ALA 666 21.612 35.399 30.120 1.00 0.00 ATOM 4953 CB ALA 666 22.381 36.691 30.358 1.00 0.00 ATOM 4954 C ALA 666 21.539 35.089 28.626 1.00 0.00 ATOM 4955 O ALA 666 22.325 35.564 27.801 1.00 0.00 ATOM 4956 N MET 667 20.603 34.197 28.292 1.00 0.00 ATOM 4957 CA MET 667 20.438 33.711 26.932 1.00 0.00 ATOM 4958 CB MET 667 19.508 32.506 26.895 1.00 0.00 ATOM 4959 CG MET 667 20.164 31.231 27.399 1.00 0.00 ATOM 4960 SD MET 667 19.177 29.764 27.019 1.00 0.00 ATOM 4961 CE MET 667 19.603 29.550 25.314 1.00 0.00 ATOM 4962 C MET 667 19.983 34.740 25.910 1.00 0.00 ATOM 4963 O MET 667 19.290 35.702 26.232 1.00 0.00 ATOM 4964 N ARG 668 20.399 34.555 24.657 1.00 0.00 ATOM 4965 CA ARG 668 19.995 35.450 23.585 1.00 0.00 ATOM 4966 CB ARG 668 21.164 35.832 22.687 1.00 0.00 ATOM 4967 CG ARG 668 22.236 36.636 23.388 1.00 0.00 ATOM 4968 CD ARG 668 23.157 37.201 22.329 1.00 0.00 ATOM 4969 NE ARG 668 24.360 37.729 22.938 1.00 0.00 ATOM 4970 CZ ARG 668 24.683 39.019 22.926 1.00 0.00 ATOM 4971 NH1 ARG 668 23.932 39.942 22.337 1.00 0.00 ATOM 4972 NH2 ARG 668 25.830 39.350 23.495 1.00 0.00 ATOM 4973 C ARG 668 18.928 34.771 22.741 1.00 0.00 ATOM 4974 O ARG 668 19.060 33.570 22.482 1.00 0.00 TER END