####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 563), selected 80 , name T1052TS409_1-D3 # Molecule2: number of CA atoms 80 ( 563), selected 80 , name T1052-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS409_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 589 - 668 3.19 3.19 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 610 - 636 1.95 4.06 LCS_AVERAGE: 26.83 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 621 - 632 0.97 4.22 LCS_AVERAGE: 9.39 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 589 T 589 3 3 80 0 3 3 7 9 28 36 54 60 69 73 77 80 80 80 80 80 80 80 80 LCS_GDT R 590 R 590 3 8 80 0 10 16 19 22 28 53 64 69 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT Q 591 Q 591 3 8 80 0 3 4 10 28 45 59 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT Y 592 Y 592 3 8 80 5 13 24 34 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 593 A 593 4 8 80 3 13 25 34 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT P 594 P 594 4 8 80 3 10 22 31 44 56 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT V 595 V 595 4 8 80 3 4 8 9 25 32 40 56 64 70 73 78 80 80 80 80 80 80 80 80 LCS_GDT G 596 G 596 4 8 80 3 5 7 12 18 33 42 51 64 70 73 78 80 80 80 80 80 80 80 80 LCS_GDT G 597 G 597 4 12 80 4 9 25 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT S 598 S 598 6 12 80 4 13 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT I 599 I 599 6 12 80 6 16 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT P 600 P 600 6 12 80 4 16 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 601 A 601 7 12 80 4 5 13 25 45 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT S 602 S 602 7 12 80 4 13 27 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 603 G 603 7 12 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT S 604 S 604 7 12 80 9 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT V 605 V 605 7 12 80 9 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 606 A 606 7 12 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT L 607 L 607 7 12 80 9 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 608 T 608 6 12 80 3 8 14 31 44 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT P 609 P 609 6 11 80 3 5 13 17 32 42 52 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 610 T 610 3 27 80 3 4 11 30 39 53 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT E 611 E 611 3 27 80 3 9 20 31 44 55 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT V 612 V 612 3 27 80 3 3 5 10 22 41 56 66 68 70 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 613 G 613 4 27 80 3 9 22 32 46 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT I 614 I 614 4 27 80 3 4 10 28 38 53 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT F 615 F 615 4 27 80 3 11 24 32 46 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT W 616 W 616 4 27 80 3 4 11 27 46 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT N 617 N 617 5 27 80 3 12 24 32 46 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 618 G 618 7 27 80 3 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 619 A 619 7 27 80 6 17 27 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 620 T 620 7 27 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 621 G 621 12 27 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT K 622 K 622 12 27 80 4 18 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT C 623 C 623 12 27 80 5 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT I 624 I 624 12 27 80 7 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT F 625 F 625 12 27 80 4 10 27 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 626 G 626 12 27 80 3 8 22 32 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 627 G 627 12 27 80 6 11 25 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT I 628 I 628 12 27 80 9 17 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT D 629 D 629 12 27 80 4 15 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 630 G 630 12 27 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 631 T 631 12 27 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT F 632 F 632 12 27 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT S 633 S 633 10 27 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 634 T 634 9 27 80 6 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 635 T 635 9 27 80 3 15 27 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT L 636 L 636 9 27 80 7 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT V 637 V 637 4 25 80 3 4 6 18 33 53 62 67 69 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT N 638 N 638 4 24 80 3 4 5 25 29 39 45 62 69 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 639 A 639 3 24 80 3 3 14 31 47 54 60 64 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 640 G 640 6 24 80 4 6 16 32 47 53 60 64 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 641 T 641 6 24 80 4 6 16 25 46 53 59 64 69 73 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 642 G 642 11 25 80 4 7 22 37 47 56 63 66 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT E 643 E 643 11 25 80 8 17 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 644 T 644 11 25 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT Q 645 Q 645 11 25 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT L 646 L 646 11 25 80 9 18 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT V 647 V 647 11 25 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT F 648 F 648 11 25 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 649 T 649 11 25 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT R 650 R 650 11 25 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT D 651 D 651 11 25 80 6 14 24 35 46 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT S 652 S 652 11 25 80 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 653 A 653 8 25 80 3 3 9 33 47 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT G 654 G 654 8 25 80 6 13 18 33 46 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT S 655 S 655 8 25 80 6 9 27 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 656 A 656 8 25 80 6 15 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT V 657 V 657 8 25 80 6 9 21 35 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT S 658 S 658 8 25 80 3 9 17 32 47 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT V 659 V 659 8 25 80 6 9 17 31 46 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT S 660 S 660 8 25 80 6 9 16 30 44 56 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 661 T 661 8 25 80 3 9 25 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 662 T 662 6 25 80 0 9 20 32 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 663 A 663 6 25 80 4 10 22 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT T 664 T 664 6 25 80 8 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT F 665 F 665 6 25 80 8 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT A 666 A 666 6 25 80 4 18 30 40 47 59 63 66 70 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT M 667 M 667 6 14 80 3 6 11 23 32 47 54 64 69 74 75 78 80 80 80 80 80 80 80 80 LCS_GDT R 668 R 668 6 14 80 3 5 10 17 25 36 45 53 63 68 73 77 80 80 80 80 80 80 80 80 LCS_AVERAGE LCS_A: 45.41 ( 9.39 26.83 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 19 30 40 48 59 63 67 70 74 75 78 80 80 80 80 80 80 80 80 GDT PERCENT_AT 12.50 23.75 37.50 50.00 60.00 73.75 78.75 83.75 87.50 92.50 93.75 97.50 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.62 0.96 1.36 1.68 1.97 2.11 2.36 2.51 2.74 2.79 3.02 3.19 3.19 3.19 3.19 3.19 3.19 3.19 3.19 GDT RMS_ALL_AT 3.46 3.53 3.46 3.36 3.25 3.30 3.27 3.35 3.23 3.21 3.21 3.21 3.19 3.19 3.19 3.19 3.19 3.19 3.19 3.19 # Checking swapping # possible swapping detected: Y 592 Y 592 # possible swapping detected: F 615 F 615 # possible swapping detected: E 643 E 643 # possible swapping detected: F 665 F 665 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA T 589 T 589 8.624 0 0.614 0.632 12.296 0.000 0.000 11.449 LGA R 590 R 590 6.539 0 0.633 1.173 9.849 0.000 0.000 7.892 LGA Q 591 Q 591 4.531 0 0.677 0.995 10.178 15.909 7.071 10.178 LGA Y 592 Y 592 2.313 0 0.719 0.918 8.382 41.364 14.091 8.382 LGA A 593 A 593 2.584 0 0.176 0.209 2.800 38.636 36.364 - LGA P 594 P 594 3.526 0 0.720 0.684 4.588 19.545 13.766 4.588 LGA V 595 V 595 6.854 0 0.522 0.579 7.562 0.000 0.000 7.562 LGA G 596 G 596 6.995 0 0.048 0.048 6.995 2.727 2.727 - LGA G 597 G 597 1.798 0 0.611 0.611 2.927 39.091 39.091 - LGA S 598 S 598 1.843 0 0.091 0.510 2.718 47.727 44.848 2.718 LGA I 599 I 599 1.872 0 0.068 0.114 3.745 50.909 38.409 3.745 LGA P 600 P 600 1.722 0 0.062 0.327 3.212 50.909 41.039 3.212 LGA A 601 A 601 3.021 0 0.046 0.044 4.122 23.636 20.000 - LGA S 602 S 602 1.729 0 0.653 0.609 3.455 46.364 53.030 0.616 LGA G 603 G 603 1.736 0 0.112 0.112 1.736 61.818 61.818 - LGA S 604 S 604 1.948 0 0.036 0.693 4.149 47.727 41.212 4.149 LGA V 605 V 605 1.590 0 0.074 0.068 1.853 58.182 57.143 1.224 LGA A 606 A 606 1.184 0 0.129 0.163 2.109 55.000 57.091 - LGA L 607 L 607 1.170 0 0.052 1.293 4.361 65.909 46.818 4.361 LGA T 608 T 608 3.009 0 0.053 1.108 4.338 16.818 13.766 4.317 LGA P 609 P 609 4.571 0 0.259 0.621 7.840 11.818 6.753 7.840 LGA T 610 T 610 3.928 0 0.046 0.185 5.117 13.182 8.571 4.169 LGA E 611 E 611 3.482 0 0.691 0.846 6.072 8.636 6.667 5.912 LGA V 612 V 612 4.799 0 0.554 1.065 8.049 8.182 4.675 8.049 LGA G 613 G 613 2.022 0 0.519 0.519 2.891 38.636 38.636 - LGA I 614 I 614 3.912 0 0.119 1.079 7.862 20.909 11.136 7.811 LGA F 615 F 615 2.277 0 0.599 0.547 4.271 24.545 18.843 3.993 LGA W 616 W 616 2.610 0 0.042 1.109 9.435 48.636 15.065 7.729 LGA N 617 N 617 2.093 0 0.563 0.542 6.933 48.182 24.318 6.262 LGA G 618 G 618 1.796 0 0.144 0.144 2.003 55.000 55.000 - LGA A 619 A 619 1.396 0 0.182 0.207 2.038 82.273 73.455 - LGA T 620 T 620 1.236 0 0.164 0.192 2.261 61.818 55.325 2.261 LGA G 621 G 621 1.873 0 0.094 0.094 2.059 47.727 47.727 - LGA K 622 K 622 2.876 0 0.056 0.728 3.504 27.273 21.414 3.504 LGA C 623 C 623 2.887 0 0.123 0.735 3.961 25.000 23.030 3.961 LGA I 624 I 624 1.834 0 0.062 0.095 2.349 44.545 49.545 1.796 LGA F 625 F 625 1.964 0 0.142 0.965 3.331 44.545 48.099 3.331 LGA G 626 G 626 2.634 0 0.110 0.110 2.843 32.727 32.727 - LGA G 627 G 627 1.209 0 0.045 0.045 1.433 73.636 73.636 - LGA I 628 I 628 1.064 0 0.064 0.071 1.468 69.545 67.500 1.075 LGA D 629 D 629 1.969 0 0.622 0.600 4.620 35.455 40.000 2.068 LGA G 630 G 630 1.429 0 0.048 0.048 1.429 65.455 65.455 - LGA T 631 T 631 1.509 0 0.066 1.159 3.731 58.182 49.351 1.855 LGA F 632 F 632 1.346 0 0.064 0.136 1.425 65.455 65.455 1.228 LGA S 633 S 633 1.006 0 0.119 0.186 1.225 69.545 68.182 1.225 LGA T 634 T 634 0.459 0 0.159 0.179 1.962 83.182 71.429 1.942 LGA T 635 T 635 1.309 0 0.509 0.638 3.520 52.273 51.688 1.615 LGA L 636 L 636 1.673 0 0.102 1.349 8.009 70.000 37.273 8.009 LGA V 637 V 637 4.175 0 0.071 0.896 8.847 10.909 6.234 8.847 LGA N 638 N 638 5.844 0 0.573 0.846 12.650 0.455 0.227 9.191 LGA A 639 A 639 6.121 0 0.034 0.032 9.084 1.364 1.091 - LGA G 640 G 640 6.389 0 0.100 0.100 7.073 0.000 0.000 - LGA T 641 T 641 7.166 0 0.751 0.664 8.206 0.000 0.000 6.970 LGA G 642 G 642 4.595 0 0.179 0.179 5.095 5.909 5.909 - LGA E 643 E 643 3.282 0 0.039 0.613 5.414 20.909 11.515 5.182 LGA T 644 T 644 2.197 0 0.104 0.219 2.745 35.455 36.623 2.180 LGA Q 645 Q 645 1.595 0 0.141 1.125 4.048 54.545 39.798 2.090 LGA L 646 L 646 1.821 0 0.024 0.937 3.650 58.182 51.818 0.947 LGA V 647 V 647 1.289 0 0.040 0.061 1.471 65.455 65.455 1.367 LGA F 648 F 648 1.212 0 0.030 0.087 1.392 65.455 65.455 1.392 LGA T 649 T 649 1.296 0 0.108 0.124 1.752 61.818 59.221 1.536 LGA R 650 R 650 1.806 0 0.674 1.278 7.712 46.364 24.132 5.585 LGA D 651 D 651 2.494 0 0.478 0.814 4.115 32.727 25.000 3.174 LGA S 652 S 652 1.523 0 0.140 0.572 3.611 45.455 35.152 3.611 LGA A 653 A 653 2.919 0 0.640 0.600 4.161 31.818 26.545 - LGA G 654 G 654 2.687 0 0.136 0.136 2.987 32.727 32.727 - LGA S 655 S 655 2.074 0 0.075 0.688 4.475 35.455 27.576 4.475 LGA A 656 A 656 1.529 0 0.708 0.655 3.488 46.364 47.273 - LGA V 657 V 657 2.417 0 0.048 0.051 3.152 38.182 30.909 3.152 LGA S 658 S 658 2.959 0 0.180 0.501 3.525 30.000 30.303 1.980 LGA V 659 V 659 2.945 0 0.163 1.116 4.724 20.455 25.195 4.724 LGA S 660 S 660 3.510 0 0.610 0.584 5.230 11.818 9.697 4.288 LGA T 661 T 661 1.793 0 0.319 1.143 4.962 62.273 42.338 4.962 LGA T 662 T 662 2.782 0 0.713 0.609 5.995 41.818 24.416 4.917 LGA A 663 A 663 1.938 0 0.692 0.668 3.687 34.545 37.818 - LGA T 664 T 664 2.447 0 0.195 0.244 3.595 35.455 25.974 3.595 LGA F 665 F 665 2.120 0 0.698 0.969 8.904 35.455 16.529 8.904 LGA A 666 A 666 3.431 0 0.299 0.348 3.894 16.364 16.727 - LGA M 667 M 667 5.905 0 0.082 0.997 9.804 0.000 0.000 9.804 LGA R 668 R 668 7.611 0 0.121 0.896 10.115 0.000 0.000 7.786 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 80 320 320 100.00 563 563 100.00 80 59 SUMMARY(RMSD_GDC): 3.193 3.174 4.021 36.830 31.761 20.678 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 67 2.36 64.375 59.942 2.722 LGA_LOCAL RMSD: 2.361 Number of atoms: 67 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.352 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 3.193 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.265804 * X + -0.913351 * Y + -0.308445 * Z + 67.668091 Y_new = 0.377042 * X + -0.392962 * Y + 0.838701 * Z + -3.966401 Z_new = -0.887236 * X + 0.106634 * Y + 0.448823 * Z + 6.522364 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.184851 1.091318 0.233260 [DEG: 125.1827 62.5279 13.3648 ] ZXZ: -2.789181 1.105349 -1.451184 [DEG: -159.8083 63.3318 -83.1467 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1052TS409_1-D3 REMARK 2: T1052-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1052TS409_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 67 2.36 59.942 3.19 REMARK ---------------------------------------------------------- MOLECULE T1052TS409_1-D3 PFRMAT TS TARGET T1052 MODEL 1 PARENT N/A ATOM 5481 N THR 589 18.156 25.294 37.113 1.00 10.33 ATOM 5482 CA THR 589 18.998 25.171 38.273 1.00 10.33 ATOM 5483 C THR 589 20.405 24.758 37.860 1.00 10.33 ATOM 5484 O THR 589 21.381 25.275 38.400 1.00 10.33 ATOM 5486 CB THR 589 18.427 24.154 39.279 1.00 10.33 ATOM 5488 OG1 THR 589 18.301 22.873 38.648 1.00 10.33 ATOM 5489 CG2 THR 589 17.054 24.595 39.762 1.00 10.33 ATOM 5490 N ARG 590 20.567 23.834 36.901 1.00 11.03 ATOM 5491 CA ARG 590 21.910 23.372 36.675 1.00 11.03 ATOM 5492 C ARG 590 22.896 24.373 36.123 1.00 11.03 ATOM 5493 O ARG 590 24.031 24.441 36.588 1.00 11.03 ATOM 5495 CB ARG 590 21.913 22.177 35.721 1.00 11.03 ATOM 5496 CD ARG 590 24.006 21.144 36.643 1.00 11.03 ATOM 5498 NE ARG 590 23.366 19.950 37.191 1.00 11.03 ATOM 5499 CG ARG 590 23.300 21.646 35.394 1.00 11.03 ATOM 5500 CZ ARG 590 23.660 19.423 38.375 1.00 11.03 ATOM 5503 NH1 ARG 590 23.026 18.335 38.792 1.00 11.03 ATOM 5506 NH2 ARG 590 24.587 19.984 39.140 1.00 11.03 ATOM 5507 N GLN 591 22.510 25.187 35.131 1.00 10.65 ATOM 5508 CA GLN 591 23.413 26.011 34.354 1.00 10.65 ATOM 5509 C GLN 591 24.289 26.913 35.213 1.00 10.65 ATOM 5510 O GLN 591 25.315 27.402 34.747 1.00 10.65 ATOM 5512 CB GLN 591 22.631 26.875 33.363 1.00 10.65 ATOM 5513 CD GLN 591 24.328 26.821 31.492 1.00 10.65 ATOM 5514 CG GLN 591 23.507 27.689 32.424 1.00 10.65 ATOM 5515 OE1 GLN 591 23.974 25.671 31.227 1.00 10.65 ATOM 5518 NE2 GLN 591 25.429 27.368 30.990 1.00 10.65 ATOM 5519 N TYR 592 23.898 27.139 36.480 1.00 10.82 ATOM 5520 CA TYR 592 24.400 28.024 37.509 1.00 10.82 ATOM 5521 C TYR 592 25.766 27.803 38.105 1.00 10.82 ATOM 5522 O TYR 592 26.315 28.700 38.739 1.00 10.82 ATOM 5524 CB TYR 592 23.448 28.048 38.706 1.00 10.82 ATOM 5525 CG TYR 592 22.144 28.765 38.438 1.00 10.82 ATOM 5527 OH TYR 592 18.562 30.737 37.683 1.00 10.82 ATOM 5528 CZ TYR 592 19.747 30.084 37.935 1.00 10.82 ATOM 5529 CD1 TYR 592 21.814 29.183 37.156 1.00 10.82 ATOM 5530 CE1 TYR 592 20.624 29.839 36.901 1.00 10.82 ATOM 5531 CD2 TYR 592 21.247 29.020 39.468 1.00 10.82 ATOM 5532 CE2 TYR 592 20.054 29.675 39.232 1.00 10.82 ATOM 5533 N ALA 593 26.470 26.643 37.985 1.00 11.38 ATOM 5534 CA ALA 593 27.731 26.573 38.719 1.00 11.38 ATOM 5535 C ALA 593 29.023 26.576 37.906 1.00 11.38 ATOM 5536 O ALA 593 29.357 25.575 37.277 1.00 11.38 ATOM 5538 CB ALA 593 27.769 25.326 39.590 1.00 11.38 ATOM 5539 N PRO 594 29.673 27.737 37.993 1.00 11.33 ATOM 5540 CA PRO 594 31.015 28.079 37.514 1.00 11.33 ATOM 5541 C PRO 594 32.243 27.894 38.379 1.00 11.33 ATOM 5542 O PRO 594 33.345 27.742 37.857 1.00 11.33 ATOM 5543 CB PRO 594 30.926 29.573 37.197 1.00 11.33 ATOM 5544 CD PRO 594 28.866 29.006 38.277 1.00 11.33 ATOM 5545 CG PRO 594 29.893 30.094 38.141 1.00 11.33 ATOM 5546 N VAL 595 32.097 27.896 39.716 1.00 11.43 ATOM 5547 CA VAL 595 33.137 27.667 40.684 1.00 11.43 ATOM 5548 C VAL 595 34.389 28.472 40.470 1.00 11.43 ATOM 5549 O VAL 595 35.481 28.014 40.800 1.00 11.43 ATOM 5551 CB VAL 595 33.541 26.181 40.738 1.00 11.43 ATOM 5552 CG1 VAL 595 32.363 25.325 41.175 1.00 11.43 ATOM 5553 CG2 VAL 595 34.065 25.723 39.385 1.00 11.43 ATOM 5554 N GLY 596 34.303 29.699 39.922 1.00 11.66 ATOM 5555 CA GLY 596 35.472 30.531 39.839 1.00 11.66 ATOM 5556 C GLY 596 36.340 30.119 38.706 1.00 11.66 ATOM 5557 O GLY 596 37.451 30.626 38.564 1.00 11.66 ATOM 5559 N GLY 597 35.866 29.197 37.864 1.00 11.53 ATOM 5560 CA GLY 597 36.755 28.783 36.833 1.00 11.53 ATOM 5561 C GLY 597 36.873 29.881 35.832 1.00 11.53 ATOM 5562 O GLY 597 35.878 30.270 35.223 1.00 11.53 ATOM 5564 N SER 598 38.107 30.389 35.645 1.00 11.20 ATOM 5565 CA SER 598 38.299 31.381 34.636 1.00 11.20 ATOM 5566 C SER 598 38.111 30.663 33.346 1.00 11.20 ATOM 5567 O SER 598 38.582 29.537 33.193 1.00 11.20 ATOM 5569 CB SER 598 39.680 32.026 34.773 1.00 11.20 ATOM 5571 OG SER 598 39.911 32.962 33.735 1.00 11.20 ATOM 5572 N ILE 599 37.423 31.310 32.395 1.00 11.67 ATOM 5573 CA ILE 599 37.168 30.672 31.143 1.00 11.67 ATOM 5574 C ILE 599 37.856 31.476 30.103 1.00 11.67 ATOM 5575 O ILE 599 37.429 32.589 29.802 1.00 11.67 ATOM 5577 CB ILE 599 35.658 30.541 30.873 1.00 11.67 ATOM 5578 CD1 ILE 599 33.475 29.724 31.904 1.00 11.67 ATOM 5579 CG1 ILE 599 34.985 29.732 31.983 1.00 11.67 ATOM 5580 CG2 ILE 599 35.412 29.934 29.500 1.00 11.67 ATOM 5581 N PRO 600 38.900 30.927 29.556 1.00 12.24 ATOM 5582 CA PRO 600 39.670 31.648 28.591 1.00 12.24 ATOM 5583 C PRO 600 38.768 31.995 27.455 1.00 12.24 ATOM 5584 O PRO 600 37.814 31.273 27.182 1.00 12.24 ATOM 5585 CB PRO 600 40.777 30.669 28.195 1.00 12.24 ATOM 5586 CD PRO 600 39.487 29.570 29.884 1.00 12.24 ATOM 5587 CG PRO 600 40.882 29.735 29.353 1.00 12.24 ATOM 5588 N ALA 601 39.061 33.110 26.766 1.00 11.86 ATOM 5589 CA ALA 601 38.227 33.635 25.722 1.00 11.86 ATOM 5590 C ALA 601 38.115 32.677 24.596 1.00 11.86 ATOM 5591 O ALA 601 37.040 32.525 24.020 1.00 11.86 ATOM 5593 CB ALA 601 38.773 34.965 25.226 1.00 11.86 ATOM 5594 N SER 602 39.222 32.001 24.254 1.00 11.64 ATOM 5595 CA SER 602 39.212 31.068 23.171 1.00 11.64 ATOM 5596 C SER 602 38.651 29.727 23.573 1.00 11.64 ATOM 5597 O SER 602 38.087 29.020 22.740 1.00 11.64 ATOM 5599 CB SER 602 40.625 30.882 22.612 1.00 11.64 ATOM 5601 OG SER 602 41.472 30.264 23.565 1.00 11.64 ATOM 5602 N GLY 603 38.777 29.337 24.859 1.00 11.67 ATOM 5603 CA GLY 603 38.625 27.957 25.241 1.00 11.67 ATOM 5604 C GLY 603 37.272 27.493 25.656 1.00 11.67 ATOM 5605 O GLY 603 36.277 27.851 25.029 1.00 11.67 ATOM 5607 N SER 604 37.271 26.689 26.737 1.00 11.70 ATOM 5608 CA SER 604 36.051 26.118 27.189 1.00 11.70 ATOM 5609 C SER 604 36.140 25.885 28.658 1.00 11.70 ATOM 5610 O SER 604 37.238 25.850 29.211 1.00 11.70 ATOM 5612 CB SER 604 35.758 24.816 26.438 1.00 11.70 ATOM 5614 OG SER 604 36.719 23.822 26.748 1.00 11.70 ATOM 5615 N VAL 605 34.951 25.722 29.258 1.00 11.90 ATOM 5616 CA VAL 605 34.737 25.400 30.633 1.00 11.90 ATOM 5617 C VAL 605 33.725 24.288 30.604 1.00 11.90 ATOM 5618 O VAL 605 32.909 24.220 29.688 1.00 11.90 ATOM 5620 CB VAL 605 34.270 26.630 31.435 1.00 11.90 ATOM 5621 CG1 VAL 605 32.935 27.134 30.908 1.00 11.90 ATOM 5622 CG2 VAL 605 34.170 26.294 32.915 1.00 11.90 ATOM 5623 N ALA 606 33.730 23.379 31.597 1.00 12.33 ATOM 5624 CA ALA 606 32.766 22.324 31.486 1.00 12.33 ATOM 5625 C ALA 606 31.788 22.433 32.609 1.00 12.33 ATOM 5626 O ALA 606 32.184 22.431 33.772 1.00 12.33 ATOM 5628 CB ALA 606 33.459 20.970 31.491 1.00 12.33 ATOM 5629 N LEU 607 30.496 22.523 32.255 1.00 11.88 ATOM 5630 CA LEU 607 29.463 22.660 33.239 1.00 11.88 ATOM 5631 C LEU 607 28.755 21.336 33.320 1.00 11.88 ATOM 5632 O LEU 607 28.493 20.714 32.294 1.00 11.88 ATOM 5634 CB LEU 607 28.517 23.803 32.867 1.00 11.88 ATOM 5635 CG LEU 607 27.334 24.038 33.810 1.00 11.88 ATOM 5636 CD1 LEU 607 27.820 24.504 35.174 1.00 11.88 ATOM 5637 CD2 LEU 607 26.368 25.052 33.218 1.00 11.88 ATOM 5638 N THR 608 28.425 20.881 34.544 1.00 12.36 ATOM 5639 CA THR 608 27.779 19.604 34.685 1.00 12.36 ATOM 5640 C THR 608 26.289 19.779 34.511 1.00 12.36 ATOM 5641 O THR 608 25.724 20.761 34.986 1.00 12.36 ATOM 5643 CB THR 608 28.090 18.963 36.050 1.00 12.36 ATOM 5645 OG1 THR 608 29.501 18.739 36.166 1.00 12.36 ATOM 5646 CG2 THR 608 27.373 17.627 36.186 1.00 12.36 ATOM 5647 N PRO 609 25.704 18.819 33.843 1.00 12.83 ATOM 5648 CA PRO 609 24.303 18.898 33.507 1.00 12.83 ATOM 5649 C PRO 609 23.333 18.360 34.441 1.00 12.83 ATOM 5650 O PRO 609 23.335 18.729 35.613 1.00 12.83 ATOM 5651 CB PRO 609 24.192 18.112 32.198 1.00 12.83 ATOM 5652 CD PRO 609 26.519 18.128 32.759 1.00 12.83 ATOM 5653 CG PRO 609 25.559 18.181 31.604 1.00 12.83 ATOM 5654 N THR 610 22.499 17.465 33.903 1.00 12.42 ATOM 5655 CA THR 610 21.397 17.071 34.680 1.00 12.42 ATOM 5656 C THR 610 20.572 18.282 34.931 1.00 12.42 ATOM 5657 O THR 610 21.068 19.400 34.816 1.00 12.42 ATOM 5659 CB THR 610 21.843 16.413 35.998 1.00 12.42 ATOM 5661 OG1 THR 610 22.216 17.427 36.940 1.00 12.42 ATOM 5662 CG2 THR 610 23.040 15.504 35.762 1.00 12.42 ATOM 5663 N GLU 611 19.344 17.972 35.271 1.00 13.38 ATOM 5664 CA GLU 611 18.316 18.909 35.494 1.00 13.38 ATOM 5665 C GLU 611 17.975 19.637 34.214 1.00 13.38 ATOM 5666 O GLU 611 16.977 20.351 34.158 1.00 13.38 ATOM 5668 CB GLU 611 18.725 19.905 36.582 1.00 13.38 ATOM 5669 CD GLU 611 20.192 18.584 38.157 1.00 13.38 ATOM 5670 CG GLU 611 18.865 19.291 37.965 1.00 13.38 ATOM 5671 OE1 GLU 611 21.186 19.005 37.529 1.00 13.38 ATOM 5672 OE2 GLU 611 20.238 17.607 38.935 1.00 13.38 ATOM 5673 N VAL 612 18.783 19.477 33.154 1.00 11.36 ATOM 5674 CA VAL 612 18.796 20.239 31.937 1.00 11.36 ATOM 5675 C VAL 612 17.585 19.996 31.113 1.00 11.36 ATOM 5676 O VAL 612 17.528 20.420 29.962 1.00 11.36 ATOM 5678 CB VAL 612 20.050 19.938 31.095 1.00 11.36 ATOM 5679 CG1 VAL 612 21.309 20.291 31.872 1.00 11.36 ATOM 5680 CG2 VAL 612 20.071 18.476 30.675 1.00 11.36 ATOM 5681 N GLY 613 16.565 19.318 31.649 1.00 11.38 ATOM 5682 CA GLY 613 15.454 19.054 30.782 1.00 11.38 ATOM 5683 C GLY 613 14.906 20.265 30.107 1.00 11.38 ATOM 5684 O GLY 613 14.381 21.155 30.771 1.00 11.38 ATOM 5686 N ILE 614 15.080 20.182 28.777 1.00 9.61 ATOM 5687 CA ILE 614 14.539 20.990 27.732 1.00 9.61 ATOM 5688 C ILE 614 15.673 21.431 26.920 1.00 9.61 ATOM 5689 O ILE 614 15.580 21.455 25.694 1.00 9.61 ATOM 5691 CB ILE 614 13.727 22.172 28.294 1.00 9.61 ATOM 5692 CD1 ILE 614 11.893 23.829 27.672 1.00 9.61 ATOM 5693 CG1 ILE 614 12.949 22.865 27.175 1.00 9.61 ATOM 5694 CG2 ILE 614 14.637 23.139 29.036 1.00 9.61 ATOM 5695 N PHE 615 16.690 21.749 27.688 1.00 10.60 ATOM 5696 CA PHE 615 17.765 22.497 27.187 1.00 10.60 ATOM 5697 C PHE 615 18.700 21.691 26.341 1.00 10.60 ATOM 5698 O PHE 615 19.133 22.155 25.288 1.00 10.60 ATOM 5700 CB PHE 615 18.555 23.133 28.332 1.00 10.60 ATOM 5701 CG PHE 615 17.836 24.265 29.009 1.00 10.60 ATOM 5702 CZ PHE 615 16.506 26.364 30.257 1.00 10.60 ATOM 5703 CD1 PHE 615 17.210 24.076 30.229 1.00 10.60 ATOM 5704 CE1 PHE 615 16.549 25.116 30.852 1.00 10.60 ATOM 5705 CD2 PHE 615 17.785 25.519 28.426 1.00 10.60 ATOM 5706 CE2 PHE 615 17.123 26.560 29.050 1.00 10.60 ATOM 5707 N TRP 616 19.009 20.464 26.802 1.00 11.97 ATOM 5708 CA TRP 616 19.972 19.545 26.264 1.00 11.97 ATOM 5709 C TRP 616 19.485 18.909 25.034 1.00 11.97 ATOM 5710 O TRP 616 18.278 18.809 24.829 1.00 11.97 ATOM 5712 CB TRP 616 20.325 18.473 27.298 1.00 11.97 ATOM 5715 CG TRP 616 21.378 17.514 26.830 1.00 11.97 ATOM 5716 CD1 TRP 616 22.730 17.650 26.965 1.00 11.97 ATOM 5718 NE1 TRP 616 23.373 16.568 26.414 1.00 11.97 ATOM 5719 CD2 TRP 616 21.164 16.269 26.153 1.00 11.97 ATOM 5720 CE2 TRP 616 22.431 15.707 25.908 1.00 11.97 ATOM 5721 CH2 TRP 616 21.462 13.828 24.857 1.00 11.97 ATOM 5722 CZ2 TRP 616 22.591 14.483 25.260 1.00 11.97 ATOM 5723 CE3 TRP 616 20.027 15.576 25.730 1.00 11.97 ATOM 5724 CZ3 TRP 616 20.191 14.364 25.087 1.00 11.97 ATOM 5725 N ASN 617 20.458 18.474 24.221 1.00 11.09 ATOM 5726 CA ASN 617 20.210 17.611 23.119 1.00 11.09 ATOM 5727 C ASN 617 21.360 17.718 22.212 1.00 11.09 ATOM 5728 O ASN 617 21.318 17.197 21.100 1.00 11.09 ATOM 5730 CB ASN 617 18.887 17.975 22.440 1.00 11.09 ATOM 5731 CG ASN 617 18.471 16.961 21.394 1.00 11.09 ATOM 5732 OD1 ASN 617 18.250 15.789 21.702 1.00 11.09 ATOM 5735 ND2 ASN 617 18.363 17.409 20.148 1.00 11.09 ATOM 5736 N GLY 618 22.409 18.388 22.674 1.00 14.04 ATOM 5737 CA GLY 618 23.474 18.560 21.754 1.00 14.04 ATOM 5738 C GLY 618 23.125 19.768 21.017 1.00 14.04 ATOM 5739 O GLY 618 23.741 20.065 19.995 1.00 14.04 ATOM 5741 N ALA 619 22.129 20.439 21.584 1.00 11.81 ATOM 5742 CA ALA 619 21.762 21.685 21.065 1.00 11.81 ATOM 5743 C ALA 619 22.861 22.543 21.497 1.00 11.81 ATOM 5744 O ALA 619 23.634 22.161 22.374 1.00 11.81 ATOM 5746 CB ALA 619 20.394 22.095 21.588 1.00 11.81 ATOM 5747 N THR 620 22.904 23.701 20.869 1.00 11.78 ATOM 5748 CA THR 620 23.876 24.632 21.249 1.00 11.78 ATOM 5749 C THR 620 23.039 25.763 21.598 1.00 11.78 ATOM 5750 O THR 620 21.817 25.672 21.520 1.00 11.78 ATOM 5752 CB THR 620 24.880 24.895 20.112 1.00 11.78 ATOM 5754 OG1 THR 620 24.212 25.536 19.018 1.00 11.78 ATOM 5755 CG2 THR 620 25.479 23.588 19.617 1.00 11.78 ATOM 5756 N GLY 621 23.680 26.837 21.979 1.00 11.33 ATOM 5757 CA GLY 621 22.782 27.867 22.242 1.00 11.33 ATOM 5758 C GLY 621 23.576 28.859 22.919 1.00 11.33 ATOM 5759 O GLY 621 24.795 28.726 22.997 1.00 11.33 ATOM 5761 N LYS 622 22.890 29.864 23.420 1.00 11.36 ATOM 5762 CA LYS 622 23.767 30.753 24.047 1.00 11.36 ATOM 5763 C LYS 622 23.345 30.941 25.451 1.00 11.36 ATOM 5764 O LYS 622 22.163 30.810 25.762 1.00 11.36 ATOM 5766 CB LYS 622 23.804 32.087 23.298 1.00 11.36 ATOM 5767 CD LYS 622 24.437 33.360 21.229 1.00 11.36 ATOM 5768 CE LYS 622 24.970 33.262 19.810 1.00 11.36 ATOM 5769 CG LYS 622 24.367 31.993 21.890 1.00 11.36 ATOM 5773 NZ LYS 622 25.031 34.593 19.146 1.00 11.36 ATOM 5774 N CYS 623 24.330 31.260 26.306 1.00 10.43 ATOM 5775 CA CYS 623 24.034 31.480 27.686 1.00 10.43 ATOM 5776 C CYS 623 24.804 32.673 28.146 1.00 10.43 ATOM 5777 O CYS 623 25.925 32.896 27.694 1.00 10.43 ATOM 5779 CB CYS 623 24.375 30.238 28.512 1.00 10.43 ATOM 5780 SG CYS 623 23.440 28.758 28.056 1.00 10.43 ATOM 5781 N ILE 624 24.225 33.468 29.064 1.00 9.83 ATOM 5782 CA ILE 624 24.931 34.661 29.420 1.00 9.83 ATOM 5783 C ILE 624 25.463 34.493 30.800 1.00 9.83 ATOM 5784 O ILE 624 24.690 34.396 31.751 1.00 9.83 ATOM 5786 CB ILE 624 24.028 35.904 29.314 1.00 9.83 ATOM 5787 CD1 ILE 624 22.441 37.129 27.738 1.00 9.83 ATOM 5788 CG1 ILE 624 23.503 36.061 27.884 1.00 9.83 ATOM 5789 CG2 ILE 624 24.772 37.144 29.784 1.00 9.83 ATOM 5790 N PHE 625 26.802 34.460 30.941 1.00 9.68 ATOM 5791 CA PHE 625 27.291 34.267 32.262 1.00 9.68 ATOM 5792 C PHE 625 27.746 35.583 32.751 1.00 9.68 ATOM 5793 O PHE 625 28.898 35.955 32.538 1.00 9.68 ATOM 5795 CB PHE 625 28.412 33.226 32.271 1.00 9.68 ATOM 5796 CG PHE 625 27.962 31.846 31.883 1.00 9.68 ATOM 5797 CZ PHE 625 27.134 29.291 31.167 1.00 9.68 ATOM 5798 CD1 PHE 625 26.642 31.603 31.544 1.00 9.68 ATOM 5799 CE1 PHE 625 26.228 30.334 31.187 1.00 9.68 ATOM 5800 CD2 PHE 625 28.857 30.792 31.859 1.00 9.68 ATOM 5801 CE2 PHE 625 28.442 29.523 31.502 1.00 9.68 ATOM 5802 N GLY 626 26.848 36.303 33.420 1.00 9.60 ATOM 5803 CA GLY 626 27.318 37.523 33.968 1.00 9.60 ATOM 5804 C GLY 626 27.661 38.445 32.853 1.00 9.60 ATOM 5805 O GLY 626 28.426 39.387 33.047 1.00 9.60 ATOM 5807 N GLY 627 27.101 38.202 31.656 1.00 8.49 ATOM 5808 CA GLY 627 27.361 39.134 30.601 1.00 8.49 ATOM 5809 C GLY 627 28.297 38.605 29.576 1.00 8.49 ATOM 5810 O GLY 627 28.667 39.323 28.651 1.00 8.49 ATOM 5812 N ILE 628 28.699 37.336 29.710 1.00 9.02 ATOM 5813 CA ILE 628 29.472 36.737 28.676 1.00 9.02 ATOM 5814 C ILE 628 28.498 35.851 27.946 1.00 9.02 ATOM 5815 O ILE 628 27.963 34.910 28.528 1.00 9.02 ATOM 5817 CB ILE 628 30.684 35.978 29.246 1.00 9.02 ATOM 5818 CD1 ILE 628 32.062 38.119 29.369 1.00 9.02 ATOM 5819 CG1 ILE 628 31.539 36.908 30.110 1.00 9.02 ATOM 5820 CG2 ILE 628 31.493 35.346 28.123 1.00 9.02 ATOM 5821 N ASP 629 28.271 36.156 26.650 1.00 10.72 ATOM 5822 CA ASP 629 27.223 35.588 25.832 1.00 10.72 ATOM 5823 C ASP 629 27.460 34.188 25.409 1.00 10.72 ATOM 5824 O ASP 629 26.556 33.360 25.487 1.00 10.72 ATOM 5826 CB ASP 629 27.006 36.434 24.576 1.00 10.72 ATOM 5827 CG ASP 629 26.349 37.767 24.878 1.00 10.72 ATOM 5828 OD1 ASP 629 25.818 37.928 25.997 1.00 10.72 ATOM 5829 OD2 ASP 629 26.365 38.652 23.996 1.00 10.72 ATOM 5830 N GLY 630 28.694 33.980 24.977 1.00 10.81 ATOM 5831 CA GLY 630 29.308 32.751 24.644 1.00 10.81 ATOM 5832 C GLY 630 28.508 31.926 23.750 1.00 10.81 ATOM 5833 O GLY 630 27.725 32.451 22.962 1.00 10.81 ATOM 5835 N THR 631 28.759 30.632 23.937 1.00 11.47 ATOM 5836 CA THR 631 27.936 29.683 23.312 1.00 11.47 ATOM 5837 C THR 631 27.986 28.466 24.165 1.00 11.47 ATOM 5838 O THR 631 29.023 28.170 24.754 1.00 11.47 ATOM 5840 CB THR 631 28.396 29.400 21.870 1.00 11.47 ATOM 5842 OG1 THR 631 27.459 28.524 21.231 1.00 11.47 ATOM 5843 CG2 THR 631 29.763 28.734 21.869 1.00 11.47 ATOM 5844 N PHE 632 26.871 27.733 24.243 1.00 11.55 ATOM 5845 CA PHE 632 26.977 26.568 25.050 1.00 11.55 ATOM 5846 C PHE 632 26.718 25.408 24.154 1.00 11.55 ATOM 5847 O PHE 632 25.928 25.516 23.218 1.00 11.55 ATOM 5849 CB PHE 632 25.994 26.637 26.220 1.00 11.55 ATOM 5850 CG PHE 632 24.552 26.651 25.801 1.00 11.55 ATOM 5851 CZ PHE 632 21.883 26.685 25.023 1.00 11.55 ATOM 5852 CD1 PHE 632 23.843 25.470 25.667 1.00 11.55 ATOM 5853 CE1 PHE 632 22.516 25.484 25.281 1.00 11.55 ATOM 5854 CD2 PHE 632 23.904 27.846 25.540 1.00 11.55 ATOM 5855 CE2 PHE 632 22.578 27.859 25.154 1.00 11.55 ATOM 5856 N SER 633 27.385 24.279 24.441 1.00 12.12 ATOM 5857 CA SER 633 27.202 23.106 23.641 1.00 12.12 ATOM 5858 C SER 633 26.849 21.987 24.569 1.00 12.12 ATOM 5859 O SER 633 27.285 21.978 25.718 1.00 12.12 ATOM 5861 CB SER 633 28.465 22.807 22.832 1.00 12.12 ATOM 5863 OG SER 633 29.557 22.506 23.682 1.00 12.12 ATOM 5864 N THR 634 26.061 21.002 24.120 1.00 12.32 ATOM 5865 CA THR 634 25.821 20.024 25.137 1.00 12.32 ATOM 5866 C THR 634 26.045 18.658 24.602 1.00 12.32 ATOM 5867 O THR 634 25.261 18.179 23.786 1.00 12.32 ATOM 5869 CB THR 634 24.392 20.135 25.701 1.00 12.32 ATOM 5871 OG1 THR 634 23.443 20.002 24.636 1.00 12.32 ATOM 5872 CG2 THR 634 24.187 21.486 26.368 1.00 12.32 ATOM 5873 N THR 635 27.130 18.034 25.081 1.00 13.19 ATOM 5874 CA THR 635 27.496 16.797 24.479 1.00 13.19 ATOM 5875 C THR 635 26.962 15.435 24.866 1.00 13.19 ATOM 5876 O THR 635 26.016 14.947 24.253 1.00 13.19 ATOM 5878 CB THR 635 29.014 16.553 24.569 1.00 13.19 ATOM 5880 OG1 THR 635 29.425 16.578 25.940 1.00 13.19 ATOM 5881 CG2 THR 635 29.772 17.634 23.813 1.00 13.19 ATOM 5882 N LEU 636 27.554 14.796 25.897 1.00 13.47 ATOM 5883 CA LEU 636 27.457 13.378 25.643 1.00 13.47 ATOM 5884 C LEU 636 26.846 12.494 26.649 1.00 13.47 ATOM 5885 O LEU 636 27.427 12.273 27.710 1.00 13.47 ATOM 5887 CB LEU 636 28.843 12.785 25.377 1.00 13.47 ATOM 5888 CG LEU 636 29.612 13.365 24.189 1.00 13.47 ATOM 5889 CD1 LEU 636 31.013 12.778 24.116 1.00 13.47 ATOM 5890 CD2 LEU 636 28.863 13.110 22.889 1.00 13.47 ATOM 5891 N VAL 637 25.671 12.011 26.256 1.00 15.00 ATOM 5892 CA VAL 637 24.939 11.006 26.945 1.00 15.00 ATOM 5893 C VAL 637 25.545 9.678 26.650 1.00 15.00 ATOM 5894 O VAL 637 25.366 8.735 27.416 1.00 15.00 ATOM 5896 CB VAL 637 23.448 11.029 26.560 1.00 15.00 ATOM 5897 CG1 VAL 637 23.253 10.479 25.155 1.00 15.00 ATOM 5898 CG2 VAL 637 22.626 10.236 27.565 1.00 15.00 ATOM 5899 N ASN 638 26.273 9.620 25.527 1.00 15.00 ATOM 5900 CA ASN 638 26.835 8.456 24.914 1.00 15.00 ATOM 5901 C ASN 638 27.822 7.768 25.792 1.00 15.00 ATOM 5902 O ASN 638 28.179 6.620 25.538 1.00 15.00 ATOM 5904 CB ASN 638 27.489 8.817 23.579 1.00 15.00 ATOM 5905 CG ASN 638 26.474 9.135 22.499 1.00 15.00 ATOM 5906 OD1 ASN 638 25.310 8.746 22.594 1.00 15.00 ATOM 5909 ND2 ASN 638 26.913 9.846 21.466 1.00 15.00 ATOM 5910 N ALA 639 28.305 8.425 26.865 1.00 15.00 ATOM 5911 CA ALA 639 29.361 7.876 27.680 1.00 15.00 ATOM 5912 C ALA 639 28.984 6.492 28.097 1.00 15.00 ATOM 5913 O ALA 639 29.856 5.643 28.273 1.00 15.00 ATOM 5915 CB ALA 639 29.616 8.766 28.886 1.00 15.00 ATOM 5916 N GLY 640 27.679 6.240 28.255 1.00 15.00 ATOM 5917 CA GLY 640 27.208 4.955 28.668 1.00 15.00 ATOM 5918 C GLY 640 26.520 5.235 29.935 1.00 15.00 ATOM 5919 O GLY 640 25.554 4.556 30.275 1.00 15.00 ATOM 5921 N THR 641 27.041 6.255 30.618 1.00 14.55 ATOM 5922 CA THR 641 26.295 6.796 31.687 1.00 14.55 ATOM 5923 C THR 641 25.430 7.757 30.936 1.00 14.55 ATOM 5924 O THR 641 25.821 8.242 29.876 1.00 14.55 ATOM 5926 CB THR 641 27.211 7.429 32.750 1.00 14.55 ATOM 5928 OG1 THR 641 27.959 8.503 32.164 1.00 14.55 ATOM 5929 CG2 THR 641 28.188 6.398 33.294 1.00 14.55 ATOM 5930 N GLY 642 24.241 8.058 31.467 1.00 13.38 ATOM 5931 CA GLY 642 23.253 8.918 30.878 1.00 13.38 ATOM 5932 C GLY 642 23.692 10.339 30.886 1.00 13.38 ATOM 5933 O GLY 642 23.188 11.144 30.107 1.00 13.38 ATOM 5935 N GLU 643 24.647 10.654 31.769 1.00 13.37 ATOM 5936 CA GLU 643 25.054 11.996 31.994 1.00 13.37 ATOM 5937 C GLU 643 25.499 12.652 30.753 1.00 13.37 ATOM 5938 O GLU 643 26.168 12.028 29.933 1.00 13.37 ATOM 5940 CB GLU 643 26.175 12.049 33.033 1.00 13.37 ATOM 5941 CD GLU 643 28.568 11.494 33.625 1.00 13.37 ATOM 5942 CG GLU 643 27.481 11.421 32.570 1.00 13.37 ATOM 5943 OE1 GLU 643 28.865 12.611 34.096 1.00 13.37 ATOM 5944 OE2 GLU 643 29.124 10.433 33.979 1.00 13.37 ATOM 5945 N THR 644 25.115 13.925 30.645 1.00 13.21 ATOM 5946 CA THR 644 25.573 14.692 29.552 1.00 13.21 ATOM 5947 C THR 644 26.471 15.728 30.149 1.00 13.21 ATOM 5948 O THR 644 26.589 15.811 31.369 1.00 13.21 ATOM 5950 CB THR 644 24.403 15.308 28.764 1.00 13.21 ATOM 5952 OG1 THR 644 23.717 16.260 29.587 1.00 13.21 ATOM 5953 CG2 THR 644 23.417 14.228 28.344 1.00 13.21 ATOM 5954 N GLN 645 27.119 16.550 29.303 1.00 12.55 ATOM 5955 CA GLN 645 27.906 17.618 29.841 1.00 12.55 ATOM 5956 C GLN 645 27.778 18.737 28.877 1.00 12.55 ATOM 5957 O GLN 645 27.542 18.507 27.693 1.00 12.55 ATOM 5959 CB GLN 645 29.355 17.168 30.040 1.00 12.55 ATOM 5960 CD GLN 645 29.307 16.477 32.470 1.00 12.55 ATOM 5961 CG GLN 645 29.519 16.031 31.037 1.00 12.55 ATOM 5962 OE1 GLN 645 29.545 17.636 32.811 1.00 12.55 ATOM 5965 NE2 GLN 645 28.860 15.556 33.315 1.00 12.55 ATOM 5966 N LEU 646 27.936 19.988 29.366 1.00 12.03 ATOM 5967 CA LEU 646 27.794 21.155 28.543 1.00 12.03 ATOM 5968 C LEU 646 29.109 21.893 28.508 1.00 12.03 ATOM 5969 O LEU 646 29.752 22.057 29.542 1.00 12.03 ATOM 5971 CB LEU 646 26.672 22.050 29.072 1.00 12.03 ATOM 5972 CG LEU 646 26.331 23.280 28.229 1.00 12.03 ATOM 5973 CD1 LEU 646 24.902 23.731 28.488 1.00 12.03 ATOM 5974 CD2 LEU 646 27.304 24.414 28.514 1.00 12.03 ATOM 5975 N VAL 647 29.510 22.347 27.306 1.00 12.02 ATOM 5976 CA VAL 647 30.765 23.024 27.167 1.00 12.02 ATOM 5977 C VAL 647 30.507 24.466 26.837 1.00 12.02 ATOM 5978 O VAL 647 29.704 24.762 25.954 1.00 12.02 ATOM 5980 CB VAL 647 31.647 22.362 26.091 1.00 12.02 ATOM 5981 CG1 VAL 647 32.948 23.131 25.923 1.00 12.02 ATOM 5982 CG2 VAL 647 31.925 20.910 26.451 1.00 12.02 ATOM 5983 N PHE 648 31.194 25.376 27.542 1.00 11.09 ATOM 5984 CA PHE 648 30.927 26.752 27.277 1.00 11.09 ATOM 5985 C PHE 648 32.127 27.388 26.663 1.00 11.09 ATOM 5986 O PHE 648 33.212 27.337 27.236 1.00 11.09 ATOM 5988 CB PHE 648 30.525 27.478 28.562 1.00 11.09 ATOM 5989 CG PHE 648 30.211 28.933 28.364 1.00 11.09 ATOM 5990 CZ PHE 648 29.636 31.628 28.000 1.00 11.09 ATOM 5991 CD1 PHE 648 29.060 29.324 27.700 1.00 11.09 ATOM 5992 CE1 PHE 648 28.772 30.662 27.518 1.00 11.09 ATOM 5993 CD2 PHE 648 31.066 29.911 28.840 1.00 11.09 ATOM 5994 CE2 PHE 648 30.777 31.250 28.657 1.00 11.09 ATOM 5995 N THR 649 31.930 28.002 25.484 1.00 10.39 ATOM 5996 CA THR 649 33.029 28.696 24.899 1.00 10.39 ATOM 5997 C THR 649 32.709 30.161 24.904 1.00 10.39 ATOM 5998 O THR 649 31.617 30.554 24.501 1.00 10.39 ATOM 6000 CB THR 649 33.315 28.197 23.471 1.00 10.39 ATOM 6002 OG1 THR 649 33.652 26.804 23.506 1.00 10.39 ATOM 6003 CG2 THR 649 34.480 28.963 22.861 1.00 10.39 ATOM 6004 N ARG 650 33.709 30.915 25.366 1.00 10.60 ATOM 6005 CA ARG 650 33.780 32.324 25.634 1.00 10.60 ATOM 6006 C ARG 650 33.751 33.191 24.404 1.00 10.60 ATOM 6007 O ARG 650 33.324 34.341 24.471 1.00 10.60 ATOM 6009 CB ARG 650 35.046 32.655 26.426 1.00 10.60 ATOM 6010 CD ARG 650 34.004 32.740 28.708 1.00 10.60 ATOM 6012 NE ARG 650 34.070 32.274 30.091 1.00 10.60 ATOM 6013 CG ARG 650 35.063 32.087 27.836 1.00 10.60 ATOM 6014 CZ ARG 650 33.155 32.549 31.016 1.00 10.60 ATOM 6017 NH1 ARG 650 33.299 32.082 32.248 1.00 10.60 ATOM 6020 NH2 ARG 650 32.101 33.290 30.707 1.00 10.60 ATOM 6021 N ASP 651 34.197 32.662 23.249 1.00 10.67 ATOM 6022 CA ASP 651 34.184 33.327 21.972 1.00 10.67 ATOM 6023 C ASP 651 34.744 34.710 22.002 1.00 10.67 ATOM 6024 O ASP 651 34.047 35.665 21.665 1.00 10.67 ATOM 6026 CB ASP 651 32.760 33.391 21.415 1.00 10.67 ATOM 6027 CG ASP 651 32.725 33.778 19.950 1.00 10.67 ATOM 6028 OD1 ASP 651 33.728 33.535 19.246 1.00 10.67 ATOM 6029 OD2 ASP 651 31.693 34.325 19.505 1.00 10.67 ATOM 6030 N SER 652 36.001 34.902 22.389 1.00 11.27 ATOM 6031 CA SER 652 36.303 36.286 22.288 1.00 11.27 ATOM 6032 C SER 652 37.658 36.349 21.821 1.00 11.27 ATOM 6033 O SER 652 38.372 35.350 21.865 1.00 11.27 ATOM 6035 CB SER 652 36.101 36.978 23.637 1.00 11.27 ATOM 6037 OG SER 652 34.758 36.862 24.074 1.00 11.27 ATOM 6038 N ALA 653 38.031 37.541 21.370 1.00 10.20 ATOM 6039 CA ALA 653 39.301 37.794 20.794 1.00 10.20 ATOM 6040 C ALA 653 40.290 37.405 21.809 1.00 10.20 ATOM 6041 O ALA 653 41.386 36.969 21.466 1.00 10.20 ATOM 6043 CB ALA 653 39.416 39.255 20.386 1.00 10.20 ATOM 6044 N GLY 654 39.885 37.562 23.068 1.00 9.55 ATOM 6045 CA GLY 654 40.749 37.196 24.123 1.00 9.55 ATOM 6046 C GLY 654 39.989 37.575 25.317 1.00 9.55 ATOM 6047 O GLY 654 38.782 37.797 25.235 1.00 9.55 ATOM 6049 N SER 655 40.714 37.652 26.430 1.00 10.61 ATOM 6050 CA SER 655 40.178 37.950 27.711 1.00 10.61 ATOM 6051 C SER 655 39.730 36.637 28.255 1.00 10.61 ATOM 6052 O SER 655 38.991 35.915 27.591 1.00 10.61 ATOM 6054 CB SER 655 39.048 38.975 27.594 1.00 10.61 ATOM 6056 OG SER 655 37.932 38.428 26.912 1.00 10.61 ATOM 6057 N ALA 656 40.190 36.353 29.476 1.00 10.96 ATOM 6058 CA ALA 656 40.045 35.211 30.342 1.00 10.96 ATOM 6059 C ALA 656 38.711 35.017 31.033 1.00 10.96 ATOM 6060 O ALA 656 38.359 33.895 31.390 1.00 10.96 ATOM 6062 CB ALA 656 41.100 35.240 31.438 1.00 10.96 ATOM 6063 N VAL 657 37.923 36.090 31.238 1.00 10.92 ATOM 6064 CA VAL 657 36.637 36.168 31.902 1.00 10.92 ATOM 6065 C VAL 657 36.659 35.597 33.302 1.00 10.92 ATOM 6066 O VAL 657 37.030 34.441 33.490 1.00 10.92 ATOM 6068 CB VAL 657 35.540 35.451 31.093 1.00 10.92 ATOM 6069 CG1 VAL 657 34.217 35.486 31.842 1.00 10.92 ATOM 6070 CG2 VAL 657 35.395 36.081 29.717 1.00 10.92 ATOM 6071 N SER 658 36.252 36.403 34.302 1.00 11.37 ATOM 6072 CA SER 658 36.325 35.850 35.621 1.00 11.37 ATOM 6073 C SER 658 34.946 35.706 36.149 1.00 11.37 ATOM 6074 O SER 658 34.362 36.678 36.620 1.00 11.37 ATOM 6076 CB SER 658 37.181 36.737 36.528 1.00 11.37 ATOM 6078 OG SER 658 37.217 36.231 37.850 1.00 11.37 ATOM 6079 N VAL 659 34.436 34.468 36.069 1.00 10.89 ATOM 6080 CA VAL 659 33.137 34.161 36.567 1.00 10.89 ATOM 6081 C VAL 659 33.313 33.872 38.006 1.00 10.89 ATOM 6082 O VAL 659 34.336 33.316 38.402 1.00 10.89 ATOM 6084 CB VAL 659 32.501 32.986 35.802 1.00 10.89 ATOM 6085 CG1 VAL 659 32.338 33.335 34.330 1.00 10.89 ATOM 6086 CG2 VAL 659 33.341 31.728 35.964 1.00 10.89 ATOM 6087 N SER 660 32.298 34.250 38.794 1.00 10.90 ATOM 6088 CA SER 660 32.281 33.988 40.195 1.00 10.90 ATOM 6089 C SER 660 31.668 32.643 40.331 1.00 10.90 ATOM 6090 O SER 660 31.003 32.173 39.411 1.00 10.90 ATOM 6092 CB SER 660 31.507 35.080 40.935 1.00 10.90 ATOM 6094 OG SER 660 30.131 35.048 40.600 1.00 10.90 ATOM 6095 N THR 661 31.873 31.995 41.486 1.00 11.54 ATOM 6096 CA THR 661 31.419 30.654 41.709 1.00 11.54 ATOM 6097 C THR 661 29.929 30.604 41.648 1.00 11.54 ATOM 6098 O THR 661 29.363 29.605 41.210 1.00 11.54 ATOM 6100 CB THR 661 31.908 30.110 43.063 1.00 11.54 ATOM 6102 OG1 THR 661 33.341 30.082 43.081 1.00 11.54 ATOM 6103 CG2 THR 661 31.393 28.696 43.287 1.00 11.54 ATOM 6104 N THR 662 29.305 31.698 42.086 1.00 10.47 ATOM 6105 CA THR 662 27.894 31.935 42.165 1.00 10.47 ATOM 6106 C THR 662 27.255 32.425 40.885 1.00 10.47 ATOM 6107 O THR 662 26.033 32.515 40.801 1.00 10.47 ATOM 6109 CB THR 662 27.555 32.959 43.264 1.00 10.47 ATOM 6111 OG1 THR 662 28.195 34.207 42.973 1.00 10.47 ATOM 6112 CG2 THR 662 28.042 32.468 44.618 1.00 10.47 ATOM 6113 N ALA 663 28.047 32.749 39.848 1.00 9.46 ATOM 6114 CA ALA 663 27.762 33.664 38.759 1.00 9.46 ATOM 6115 C ALA 663 26.416 33.640 38.063 1.00 9.46 ATOM 6116 O ALA 663 25.943 34.676 37.602 1.00 9.46 ATOM 6118 CB ALA 663 28.781 33.492 37.642 1.00 9.46 ATOM 6119 N THR 664 25.700 32.503 37.933 1.00 10.05 ATOM 6120 CA THR 664 24.412 32.371 37.263 1.00 10.05 ATOM 6121 C THR 664 24.397 32.703 35.782 1.00 10.05 ATOM 6122 O THR 664 24.209 33.860 35.412 1.00 10.05 ATOM 6124 CB THR 664 23.338 33.256 37.925 1.00 10.05 ATOM 6126 OG1 THR 664 23.337 33.032 39.340 1.00 10.05 ATOM 6127 CG2 THR 664 21.959 32.919 37.379 1.00 10.05 ATOM 6128 N PHE 665 24.599 31.613 34.996 1.00 10.33 ATOM 6129 CA PHE 665 24.780 31.298 33.585 1.00 10.33 ATOM 6130 C PHE 665 23.632 31.380 32.566 1.00 10.33 ATOM 6131 O PHE 665 23.854 31.751 31.415 1.00 10.33 ATOM 6133 CB PHE 665 25.310 29.872 33.419 1.00 10.33 ATOM 6134 CG PHE 665 26.753 29.713 33.803 1.00 10.33 ATOM 6135 CZ PHE 665 29.425 29.413 34.509 1.00 10.33 ATOM 6136 CD1 PHE 665 27.411 30.707 34.506 1.00 10.33 ATOM 6137 CE1 PHE 665 28.739 30.561 34.860 1.00 10.33 ATOM 6138 CD2 PHE 665 27.454 28.570 33.459 1.00 10.33 ATOM 6139 CE2 PHE 665 28.781 28.424 33.813 1.00 10.33 ATOM 6140 N ALA 666 22.369 31.049 32.943 1.00 10.30 ATOM 6141 CA ALA 666 21.115 30.984 32.188 1.00 10.30 ATOM 6142 C ALA 666 21.073 30.220 30.877 1.00 10.30 ATOM 6143 O ALA 666 21.401 30.773 29.830 1.00 10.30 ATOM 6145 CB ALA 666 20.620 32.383 31.859 1.00 10.30 ATOM 6146 N MET 667 20.658 28.925 30.920 1.00 10.48 ATOM 6147 CA MET 667 20.618 28.091 29.741 1.00 10.48 ATOM 6148 C MET 667 19.463 28.424 28.861 1.00 10.48 ATOM 6149 O MET 667 18.340 28.555 29.343 1.00 10.48 ATOM 6151 CB MET 667 20.556 26.613 30.131 1.00 10.48 ATOM 6152 SD MET 667 20.632 23.926 29.460 1.00 10.48 ATOM 6153 CE MET 667 22.285 23.772 30.134 1.00 10.48 ATOM 6154 CG MET 667 20.631 25.656 28.952 1.00 10.48 ATOM 6155 N ARG 668 19.755 28.554 27.555 1.00 10.52 ATOM 6156 CA ARG 668 18.706 28.795 26.623 1.00 10.52 ATOM 6157 C ARG 668 18.219 27.445 26.299 1.00 10.52 ATOM 6158 O ARG 668 18.974 26.625 25.783 1.00 10.52 ATOM 6160 CB ARG 668 19.230 29.577 25.416 1.00 10.52 ATOM 6161 CD ARG 668 18.739 30.748 23.252 1.00 10.52 ATOM 6163 NE ARG 668 17.737 31.045 22.230 1.00 10.52 ATOM 6164 CG ARG 668 18.169 29.902 24.379 1.00 10.52 ATOM 6165 CZ ARG 668 17.995 31.694 21.099 1.00 10.52 ATOM 6168 NH1 ARG 668 17.020 31.919 20.227 1.00 10.52 ATOM 6171 NH2 ARG 668 19.226 32.114 20.841 1.00 10.52 TER END