####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 68 ( 272), selected 68 , name T1070TS217_1-D4 # Molecule2: number of CA atoms 68 ( 493), selected 68 , name T1070-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1070TS217_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 61 271 - 331 4.99 5.07 LONGEST_CONTINUOUS_SEGMENT: 61 272 - 332 5.00 5.08 LCS_AVERAGE: 89.32 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 304 - 320 1.83 7.51 LCS_AVERAGE: 20.11 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 306 - 319 1.00 7.57 LCS_AVERAGE: 12.20 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 68 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT I 265 I 265 6 7 58 4 6 6 7 9 10 23 29 36 44 49 54 62 62 64 65 66 68 68 68 LCS_GDT T 266 T 266 6 7 58 4 6 6 10 17 22 29 34 38 44 49 55 62 62 64 65 66 68 68 68 LCS_GDT W 267 W 267 6 7 58 4 6 8 15 19 24 29 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT V 268 V 268 6 7 58 4 6 7 13 19 23 29 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT Y 269 Y 269 6 7 58 3 6 9 13 18 22 26 31 37 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT N 270 N 270 6 7 58 3 6 6 13 18 22 25 30 37 43 48 54 56 62 64 65 66 68 68 68 LCS_GDT G 271 G 271 6 8 61 3 3 6 11 15 17 25 34 38 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT G 272 G 272 5 8 61 4 5 6 8 13 16 23 27 36 45 51 57 62 62 64 65 66 68 68 68 LCS_GDT S 273 S 273 5 8 61 4 5 5 11 15 17 23 28 37 45 51 57 62 62 64 65 66 68 68 68 LCS_GDT A 274 A 274 5 8 61 4 5 6 11 15 17 25 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT I 275 I 275 5 8 61 4 5 5 5 9 16 22 27 34 44 51 57 62 62 64 65 66 68 68 68 LCS_GDT G 276 G 276 5 8 61 4 5 5 6 15 17 28 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT G 277 G 277 4 8 61 3 4 7 11 15 20 29 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT E 278 E 278 4 8 61 3 4 7 11 15 23 29 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT T 279 T 279 7 15 61 5 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT E 280 E 280 7 15 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT I 281 I 281 7 15 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT T 282 T 282 7 15 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT L 283 L 283 7 15 61 8 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT D 284 D 284 7 15 61 3 6 8 20 23 26 30 35 38 45 49 55 62 62 64 65 66 68 68 68 LCS_GDT I 285 I 285 7 15 61 3 6 8 14 21 26 30 35 39 46 49 57 62 62 64 65 66 68 68 68 LCS_GDT V 286 V 286 7 15 61 3 5 8 14 19 26 30 35 39 46 49 57 62 62 64 65 66 68 68 68 LCS_GDT V 287 V 287 5 15 61 3 6 8 14 19 26 30 35 39 46 49 57 62 62 64 65 66 68 68 68 LCS_GDT D 288 D 288 5 15 61 3 6 7 11 18 24 29 35 38 45 49 57 62 62 64 65 66 68 68 68 LCS_GDT D 289 D 289 3 15 61 2 3 8 11 16 24 29 35 39 46 49 57 62 62 64 65 66 68 68 68 LCS_GDT V 290 V 290 7 15 61 3 3 8 11 17 25 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT P 291 P 291 9 15 61 3 9 10 16 20 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT A 292 A 292 9 15 61 5 9 15 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT I 293 I 293 9 15 61 5 9 15 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT D 294 D 294 9 12 61 5 9 10 16 22 25 30 35 39 46 49 57 62 62 64 65 66 68 68 68 LCS_GDT I 295 I 295 9 12 61 3 9 10 12 16 24 29 35 38 44 47 53 54 58 63 65 66 68 68 68 LCS_GDT N 296 N 296 9 12 61 5 9 10 12 16 24 29 35 38 44 47 53 54 57 60 64 66 68 68 68 LCS_GDT G 297 G 297 9 12 61 3 9 10 12 16 19 24 30 35 39 42 48 51 55 57 61 64 68 68 68 LCS_GDT S 298 S 298 9 12 61 5 9 10 12 16 18 21 29 35 38 42 47 50 53 56 58 64 68 68 68 LCS_GDT R 299 R 299 9 12 61 4 5 9 12 16 24 29 35 38 44 49 53 55 62 64 65 66 68 68 68 LCS_GDT Q 300 Q 300 5 12 61 4 6 14 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT Y 301 Y 301 4 12 61 4 5 9 17 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT K 302 K 302 4 8 61 4 4 5 5 10 13 16 17 25 39 47 53 62 62 64 65 66 68 68 68 LCS_GDT N 303 N 303 4 16 61 3 4 8 11 19 24 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT L 304 L 304 4 17 61 3 7 15 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT G 305 G 305 4 17 61 3 4 7 11 17 22 29 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT F 306 F 306 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT T 307 T 307 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT F 308 F 308 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT D 309 D 309 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT P 310 P 310 14 17 61 12 17 18 20 23 25 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT L 311 L 311 14 17 61 4 17 18 20 23 25 29 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT T 312 T 312 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT S 313 S 313 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT K 314 K 314 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT I 315 I 315 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT T 316 T 316 14 17 61 8 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT L 317 L 317 14 17 61 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT A 318 A 318 14 17 61 3 6 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT Q 319 Q 319 14 17 61 4 6 16 19 20 23 29 35 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT E 320 E 320 8 17 61 4 5 8 14 20 22 26 33 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT L 321 L 321 9 16 61 4 5 8 12 18 22 26 31 37 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT D 322 D 322 9 16 61 4 7 10 13 18 22 26 31 37 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT A 323 A 323 9 16 61 3 7 10 13 18 22 26 31 37 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT E 324 E 324 9 16 61 4 7 10 13 18 22 26 31 38 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT D 325 D 325 9 16 61 4 7 10 13 18 22 26 31 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT E 326 E 326 9 16 61 4 7 10 13 18 22 26 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT V 327 V 327 9 16 61 3 6 10 13 18 22 29 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT V 328 V 328 9 16 61 3 7 10 13 18 22 29 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT V 329 V 329 9 16 61 4 7 10 13 18 22 29 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT I 330 I 330 8 16 61 3 9 10 13 18 22 29 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT I 331 I 331 7 16 61 3 5 10 13 17 22 25 34 39 46 51 57 62 62 64 65 66 68 68 68 LCS_GDT N 332 N 332 7 14 61 3 4 10 12 17 20 25 30 37 44 49 55 62 62 64 65 66 68 68 68 LCS_AVERAGE LCS_A: 40.54 ( 12.20 20.11 89.32 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 17 18 20 23 26 30 35 39 46 51 57 62 62 64 65 66 68 68 68 GDT PERCENT_AT 17.65 25.00 26.47 29.41 33.82 38.24 44.12 51.47 57.35 67.65 75.00 83.82 91.18 91.18 94.12 95.59 97.06 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.53 0.77 1.08 1.44 1.97 2.20 2.68 3.18 3.58 3.89 4.22 4.48 4.48 4.60 4.69 4.81 5.07 5.07 5.07 GDT RMS_ALL_AT 7.87 8.05 7.79 7.83 7.24 6.98 6.96 7.05 5.51 5.22 5.31 5.16 5.11 5.14 5.12 5.10 5.08 5.07 5.07 5.07 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA I 265 I 265 6.197 4 0.313 0.313 6.817 0.455 0.227 - LGA T 266 T 266 5.422 3 0.116 0.116 6.214 0.455 0.260 - LGA W 267 W 267 4.858 10 0.157 0.157 4.977 4.091 1.169 - LGA V 268 V 268 6.096 3 0.202 0.202 10.062 0.000 0.000 - LGA Y 269 Y 269 10.769 8 0.091 0.091 11.009 0.000 0.000 - LGA N 270 N 270 14.418 4 0.606 0.606 14.418 0.000 0.000 - LGA G 271 G 271 12.850 0 0.264 0.264 13.621 0.000 0.000 - LGA G 272 G 272 12.434 0 0.674 0.674 12.593 0.000 0.000 - LGA S 273 S 273 14.038 2 0.088 0.088 14.038 0.000 0.000 - LGA A 274 A 274 10.512 1 0.065 0.065 12.701 0.000 0.000 - LGA I 275 I 275 14.233 4 0.067 0.067 14.233 0.000 0.000 - LGA G 276 G 276 9.419 0 0.074 0.074 10.716 0.000 0.000 - LGA G 277 G 277 8.146 0 0.636 0.636 8.146 0.000 0.000 - LGA E 278 E 278 6.692 5 0.061 0.061 6.740 10.909 4.848 - LGA T 279 T 279 4.184 3 0.635 0.635 4.699 5.909 3.377 - LGA E 280 E 280 2.977 5 0.105 0.105 3.231 25.000 11.111 - LGA I 281 I 281 1.824 4 0.059 0.059 2.170 55.000 27.500 - LGA T 282 T 282 1.519 3 0.044 0.044 1.519 61.818 35.325 - LGA L 283 L 283 1.105 4 0.063 0.063 1.177 69.545 34.773 - LGA D 284 D 284 1.428 4 0.557 0.557 1.616 65.909 32.955 - LGA I 285 I 285 2.376 4 0.107 0.107 2.497 38.182 19.091 - LGA V 286 V 286 2.675 3 0.133 0.133 3.098 25.000 14.286 - LGA V 287 V 287 2.949 3 0.217 0.217 3.915 20.909 11.948 - LGA D 288 D 288 4.183 4 0.589 0.589 4.183 20.455 10.227 - LGA D 289 D 289 3.764 4 0.723 0.723 5.427 6.818 3.409 - LGA V 290 V 290 3.410 3 0.265 0.265 3.410 18.182 10.390 - LGA P 291 P 291 2.934 3 0.659 0.659 4.440 21.818 12.468 - LGA A 292 A 292 0.641 1 0.103 0.103 2.170 75.455 60.364 - LGA I 293 I 293 1.084 4 0.062 0.062 2.253 58.636 29.318 - LGA D 294 D 294 1.835 4 0.098 0.098 1.917 58.182 29.091 - LGA I 295 I 295 3.081 4 0.140 0.140 4.551 14.545 7.273 - LGA N 296 N 296 4.217 4 0.051 0.051 7.223 8.182 4.091 - LGA G 297 G 297 7.403 0 0.085 0.085 9.237 0.000 0.000 - LGA S 298 S 298 7.065 2 0.067 0.067 7.065 1.364 0.909 - LGA R 299 R 299 4.093 7 0.177 0.177 5.664 13.636 4.959 - LGA Q 300 Q 300 1.717 5 0.114 0.114 3.747 48.636 21.616 - LGA Y 301 Y 301 1.505 8 0.252 0.252 4.664 28.636 9.545 - LGA K 302 K 302 7.083 5 0.421 0.421 7.083 0.000 0.000 - LGA N 303 N 303 3.983 4 0.193 0.193 4.985 22.273 11.136 - LGA L 304 L 304 0.905 4 0.498 0.498 2.022 59.091 29.545 - LGA G 305 G 305 4.117 0 0.361 0.361 4.117 19.545 19.545 - LGA F 306 F 306 2.909 7 0.253 0.253 2.909 35.455 12.893 - LGA T 307 T 307 1.592 3 0.082 0.082 1.720 58.182 33.247 - LGA F 308 F 308 1.725 7 0.060 0.060 2.533 45.000 16.364 - LGA D 309 D 309 2.544 4 0.075 0.075 2.884 33.182 16.591 - LGA P 310 P 310 3.616 3 0.088 0.088 4.307 10.000 5.714 - LGA L 311 L 311 4.766 4 0.068 0.068 4.976 3.636 1.818 - LGA T 312 T 312 3.559 3 0.093 0.093 3.741 16.818 9.610 - LGA S 313 S 313 2.577 2 0.041 0.041 2.834 35.909 23.939 - LGA K 314 K 314 1.560 5 0.096 0.096 1.790 58.182 25.859 - LGA I 315 I 315 0.885 4 0.045 0.045 1.552 70.000 35.000 - LGA T 316 T 316 2.100 3 0.174 0.174 2.244 45.000 25.714 - LGA L 317 L 317 2.857 4 0.166 0.166 3.574 23.182 11.591 - LGA A 318 A 318 1.827 1 0.335 0.335 3.532 29.545 23.636 - LGA Q 319 Q 319 5.918 5 0.196 0.196 6.742 2.727 1.212 - LGA E 320 E 320 8.804 5 0.041 0.041 9.848 0.000 0.000 - LGA L 321 L 321 11.133 4 0.088 0.088 11.959 0.000 0.000 - LGA D 322 D 322 13.884 4 0.113 0.113 14.388 0.000 0.000 - LGA A 323 A 323 15.583 1 0.125 0.125 15.583 0.000 0.000 - LGA E 324 E 324 15.240 5 0.199 0.199 15.330 0.000 0.000 - LGA D 325 D 325 12.702 4 0.058 0.058 13.609 0.000 0.000 - LGA E 326 E 326 10.641 5 0.086 0.086 11.390 0.000 0.000 - LGA V 327 V 327 7.852 3 0.036 0.036 9.039 0.000 0.000 - LGA V 328 V 328 7.576 3 0.157 0.157 7.576 0.000 0.000 - LGA V 329 V 329 6.064 3 0.087 0.087 7.363 0.000 0.000 - LGA I 330 I 330 5.602 4 0.619 0.619 7.738 0.000 0.000 - LGA I 331 I 331 5.950 4 0.062 0.062 5.950 0.000 0.000 - LGA N 332 N 332 6.941 4 0.298 0.298 6.941 0.909 0.455 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 68 272 272 100.00 493 272 55.17 68 0 SUMMARY(RMSD_GDC): 5.066 4.966 4.966 19.505 10.359 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 68 68 4.0 35 2.68 50.368 44.005 1.260 LGA_LOCAL RMSD: 2.678 Number of atoms: 35 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.048 Number of assigned atoms: 68 Std_ASGN_ATOMS RMSD: 5.066 Standard rmsd on all 68 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.895278 * X + 0.360525 * Y + -0.261721 * Z + -38.606155 Y_new = 0.190779 * X + 0.841129 * Y + 0.506068 * Z + -80.454842 Z_new = 0.402592 * X + 0.403141 * Y + -0.821826 * Z + -29.999144 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.931639 -0.414346 2.685539 [DEG: 167.9705 -23.7403 153.8701 ] ZXZ: -2.664307 2.535404 0.784716 [DEG: -152.6535 145.2680 44.9609 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1070TS217_1-D4 REMARK 2: T1070-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1070TS217_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 68 68 4.0 35 2.68 44.005 5.07 REMARK ---------------------------------------------------------- MOLECULE T1070TS217_1-D4 PFRMAT TS TARGET T1070 MODEL 1 PARENT N/A ATOM 1057 N ILE 265 -64.399 -45.804 -0.842 1.00 0.00 ATOM 1058 CA ILE 265 -64.895 -45.363 0.494 1.00 0.00 ATOM 1059 C ILE 265 -64.963 -46.464 1.428 1.00 0.00 ATOM 1060 O ILE 265 -65.552 -47.498 1.119 1.00 0.00 ATOM 1061 N THR 266 -64.334 -46.230 2.640 1.00 0.84 ATOM 1062 CA THR 266 -64.515 -47.333 3.678 1.00 0.84 ATOM 1063 C THR 266 -65.710 -47.409 4.504 1.00 0.84 ATOM 1064 O THR 266 -66.066 -46.434 5.164 1.00 0.84 ATOM 1065 N TRP 267 -66.411 -48.531 4.547 1.00 0.37 ATOM 1066 CA TRP 267 -67.692 -48.372 5.291 1.00 0.37 ATOM 1067 C TRP 267 -67.790 -49.009 6.785 1.00 0.37 ATOM 1068 O TRP 267 -67.803 -50.228 6.935 1.00 0.37 ATOM 1069 N VAL 268 -67.866 -48.239 7.877 1.00 0.81 ATOM 1070 CA VAL 268 -67.849 -49.007 9.117 1.00 0.81 ATOM 1071 C VAL 268 -69.183 -48.698 9.933 1.00 0.81 ATOM 1072 O VAL 268 -69.222 -47.751 10.714 1.00 0.81 ATOM 1073 N TYR 269 -70.266 -49.470 9.780 1.00 0.63 ATOM 1074 CA TYR 269 -71.436 -49.572 10.646 1.00 0.63 ATOM 1075 C TYR 269 -71.145 -49.876 12.121 1.00 0.63 ATOM 1076 O TYR 269 -70.253 -50.665 12.424 1.00 0.63 ATOM 1077 N ASN 270 -72.014 -49.154 12.984 1.00 0.22 ATOM 1078 CA ASN 270 -72.354 -49.475 14.370 1.00 0.22 ATOM 1079 C ASN 270 -71.296 -49.256 15.304 1.00 0.22 ATOM 1080 O ASN 270 -70.473 -48.364 15.106 1.00 0.22 ATOM 1081 N GLY 271 -71.193 -50.002 16.365 1.00 0.08 ATOM 1082 CA GLY 271 -69.985 -49.915 17.195 1.00 0.08 ATOM 1083 C GLY 271 -70.008 -48.838 18.332 1.00 0.08 ATOM 1084 O GLY 271 -69.110 -48.808 19.170 1.00 0.08 ATOM 1085 N GLY 272 -71.097 -48.007 18.262 1.00 0.48 ATOM 1086 CA GLY 272 -71.427 -47.173 19.378 1.00 0.48 ATOM 1087 C GLY 272 -71.312 -45.680 18.976 1.00 0.48 ATOM 1088 O GLY 272 -70.948 -45.373 17.844 1.00 0.48 ATOM 1089 N SER 273 -71.599 -44.737 19.856 1.00 0.02 ATOM 1090 CA SER 273 -71.425 -43.247 19.785 1.00 0.02 ATOM 1091 C SER 273 -70.078 -42.697 20.038 1.00 0.02 ATOM 1092 O SER 273 -69.346 -43.220 20.875 1.00 0.02 ATOM 1093 N ALA 274 -69.593 -41.610 19.384 1.00 0.90 ATOM 1094 CA ALA 274 -68.240 -41.201 19.747 1.00 0.90 ATOM 1095 C ALA 274 -68.275 -39.963 20.518 1.00 0.90 ATOM 1096 O ALA 274 -68.566 -38.904 19.970 1.00 0.90 ATOM 1097 N ILE 275 -67.959 -40.150 21.803 1.00 0.59 ATOM 1098 CA ILE 275 -67.938 -39.172 22.952 1.00 0.59 ATOM 1099 C ILE 275 -67.014 -38.074 22.888 1.00 0.59 ATOM 1100 O ILE 275 -67.373 -36.947 23.219 1.00 0.59 ATOM 1101 N GLY 276 -65.734 -38.211 22.468 1.00 0.87 ATOM 1102 CA GLY 276 -64.913 -37.074 21.992 1.00 0.87 ATOM 1103 C GLY 276 -65.255 -36.984 20.517 1.00 0.87 ATOM 1104 O GLY 276 -65.701 -37.965 19.926 1.00 0.87 ATOM 1105 N GLY 277 -65.077 -35.874 19.852 1.00 0.49 ATOM 1106 CA GLY 277 -65.545 -35.613 18.523 1.00 0.49 ATOM 1107 C GLY 277 -64.456 -36.260 17.624 1.00 0.49 ATOM 1108 O GLY 277 -64.027 -37.381 17.888 1.00 0.49 ATOM 1109 N GLU 278 -63.963 -35.630 16.573 1.00 0.47 ATOM 1110 CA GLU 278 -63.943 -36.004 15.099 1.00 0.47 ATOM 1111 C GLU 278 -63.129 -37.309 14.821 1.00 0.47 ATOM 1112 O GLU 278 -62.266 -37.679 15.614 1.00 0.47 ATOM 1113 N THR 279 -63.466 -37.940 13.663 1.00 0.71 ATOM 1114 CA THR 279 -62.854 -39.223 13.306 1.00 0.71 ATOM 1115 C THR 279 -62.298 -39.028 11.939 1.00 0.71 ATOM 1116 O THR 279 -63.026 -38.647 11.025 1.00 0.71 ATOM 1117 N GLU 280 -60.933 -39.324 11.856 1.00 0.59 ATOM 1118 CA GLU 280 -60.191 -39.279 10.552 1.00 0.59 ATOM 1119 C GLU 280 -59.802 -40.618 9.815 1.00 0.59 ATOM 1120 O GLU 280 -59.196 -41.500 10.420 1.00 0.59 ATOM 1121 N ILE 281 -60.190 -40.705 8.454 1.00 0.81 ATOM 1122 CA ILE 281 -59.871 -41.903 7.642 1.00 0.81 ATOM 1123 C ILE 281 -58.941 -41.373 6.427 1.00 0.81 ATOM 1124 O ILE 281 -59.287 -40.396 5.766 1.00 0.81 ATOM 1125 N THR 282 -57.803 -42.046 6.182 1.00 0.82 ATOM 1126 CA THR 282 -56.934 -41.717 5.121 1.00 0.82 ATOM 1127 C THR 282 -57.171 -42.777 4.040 1.00 0.82 ATOM 1128 O THR 282 -57.079 -43.971 4.316 1.00 0.82 ATOM 1129 N LEU 283 -57.478 -42.233 2.777 1.00 0.58 ATOM 1130 CA LEU 283 -57.830 -43.067 1.690 1.00 0.58 ATOM 1131 C LEU 283 -57.083 -42.565 0.537 1.00 0.58 ATOM 1132 O LEU 283 -57.119 -41.371 0.252 1.00 0.58 ATOM 1133 N ASP 284 -56.301 -43.403 -0.302 1.00 0.20 ATOM 1134 CA ASP 284 -55.728 -42.721 -1.402 1.00 0.20 ATOM 1135 C ASP 284 -56.777 -42.525 -2.559 1.00 0.20 ATOM 1136 O ASP 284 -56.729 -43.235 -3.561 1.00 0.20 ATOM 1137 N ILE 285 -57.723 -41.617 -2.518 1.00 0.43 ATOM 1138 CA ILE 285 -58.895 -41.436 -3.451 1.00 0.43 ATOM 1139 C ILE 285 -59.203 -39.873 -3.700 1.00 0.43 ATOM 1140 O ILE 285 -58.858 -39.037 -2.867 1.00 0.43 ATOM 1141 N VAL 286 -59.833 -39.577 -4.819 1.00 0.74 ATOM 1142 CA VAL 286 -60.613 -38.269 -4.983 1.00 0.74 ATOM 1143 C VAL 286 -62.114 -38.427 -4.725 1.00 0.74 ATOM 1144 O VAL 286 -62.788 -39.164 -5.441 1.00 0.74 ATOM 1145 N VAL 287 -62.738 -37.776 -3.731 1.00 0.34 ATOM 1146 CA VAL 287 -64.186 -37.802 -3.338 1.00 0.34 ATOM 1147 C VAL 287 -64.640 -36.507 -2.823 1.00 0.34 ATOM 1148 O VAL 287 -64.353 -36.163 -1.679 1.00 0.34 ATOM 1149 N ASP 288 -65.346 -35.847 -3.712 1.00 0.58 ATOM 1150 CA ASP 288 -66.393 -34.843 -3.549 1.00 0.58 ATOM 1151 C ASP 288 -67.344 -34.967 -4.719 1.00 0.58 ATOM 1152 O ASP 288 -66.951 -35.432 -5.786 1.00 0.58 ATOM 1153 N ASP 289 -68.630 -34.497 -4.412 1.00 0.01 ATOM 1154 CA ASP 289 -69.985 -34.996 -4.829 1.00 0.01 ATOM 1155 C ASP 289 -70.653 -36.087 -3.969 1.00 0.01 ATOM 1156 O ASP 289 -71.834 -36.377 -4.150 1.00 0.01 ATOM 1157 N VAL 290 -69.798 -36.640 -3.034 1.00 0.61 ATOM 1158 CA VAL 290 -70.161 -37.964 -2.399 1.00 0.61 ATOM 1159 C VAL 290 -71.230 -37.896 -1.242 1.00 0.61 ATOM 1160 O VAL 290 -71.294 -36.904 -0.519 1.00 0.61 ATOM 1161 N PRO 291 -71.966 -38.987 -1.188 1.00 0.80 ATOM 1162 CA PRO 291 -72.728 -39.380 -0.003 1.00 0.80 ATOM 1163 C PRO 291 -71.700 -39.630 1.007 1.00 0.80 ATOM 1164 O PRO 291 -70.649 -40.184 0.694 1.00 0.80 ATOM 1165 N ALA 292 -71.921 -39.236 2.343 1.00 0.37 ATOM 1166 CA ALA 292 -71.003 -39.176 3.443 1.00 0.37 ATOM 1167 C ALA 292 -70.803 -40.409 4.246 1.00 0.37 ATOM 1168 O ALA 292 -71.768 -41.097 4.569 1.00 0.37 ATOM 1169 N ILE 293 -69.530 -40.667 4.567 1.00 0.55 ATOM 1170 CA ILE 293 -69.011 -41.689 5.508 1.00 0.55 ATOM 1171 C ILE 293 -69.501 -41.548 6.878 1.00 0.55 ATOM 1172 O ILE 293 -69.351 -40.487 7.480 1.00 0.55 ATOM 1173 N ASP 294 -70.087 -42.649 7.367 1.00 0.95 ATOM 1174 CA ASP 294 -70.060 -43.235 8.694 1.00 0.95 ATOM 1175 C ASP 294 -68.813 -44.072 8.996 1.00 0.95 ATOM 1176 O ASP 294 -68.577 -45.085 8.342 1.00 0.95 ATOM 1177 N ILE 295 -68.117 -43.548 9.999 1.00 0.11 ATOM 1178 CA ILE 295 -67.214 -44.444 10.720 1.00 0.11 ATOM 1179 C ILE 295 -67.668 -44.274 12.080 1.00 0.11 ATOM 1180 O ILE 295 -67.729 -43.150 12.575 1.00 0.11 ATOM 1181 N ASN 296 -68.046 -45.380 12.870 1.00 0.71 ATOM 1182 CA ASN 296 -67.775 -45.521 14.368 1.00 0.71 ATOM 1183 C ASN 296 -68.162 -44.365 15.116 1.00 0.71 ATOM 1184 O ASN 296 -67.426 -43.927 15.996 1.00 0.71 ATOM 1185 N GLY 297 -69.330 -43.800 14.829 1.00 0.75 ATOM 1186 CA GLY 297 -70.208 -43.104 15.690 1.00 0.75 ATOM 1187 C GLY 297 -69.893 -41.634 15.460 1.00 0.75 ATOM 1188 O GLY 297 -70.288 -40.787 16.258 1.00 0.75 ATOM 1189 N SER 298 -69.150 -41.349 14.300 1.00 0.88 ATOM 1190 CA SER 298 -69.280 -40.017 13.800 1.00 0.88 ATOM 1191 C SER 298 -69.773 -40.138 12.363 1.00 0.88 ATOM 1192 O SER 298 -69.279 -40.976 11.611 1.00 0.88 ATOM 1193 N ARG 299 -70.762 -39.322 11.872 1.00 0.49 ATOM 1194 CA ARG 299 -72.021 -39.692 11.375 1.00 0.49 ATOM 1195 C ARG 299 -72.414 -39.150 9.997 1.00 0.49 ATOM 1196 O ARG 299 -71.602 -38.515 9.329 1.00 0.49 ATOM 1197 N GLN 300 -73.642 -39.454 9.709 1.00 0.85 ATOM 1198 CA GLN 300 -74.217 -39.048 8.501 1.00 0.85 ATOM 1199 C GLN 300 -74.497 -37.473 8.448 1.00 0.85 ATOM 1200 O GLN 300 -74.452 -36.804 9.479 1.00 0.85 ATOM 1201 N TYR 301 -74.807 -36.835 7.224 1.00 0.11 ATOM 1202 CA TYR 301 -74.552 -35.481 6.935 1.00 0.11 ATOM 1203 C TYR 301 -75.714 -34.753 6.368 1.00 0.11 ATOM 1204 O TYR 301 -75.863 -34.683 5.149 1.00 0.11 ATOM 1205 N LYS 302 -76.601 -34.162 7.239 1.00 0.53 ATOM 1206 CA LYS 302 -77.220 -32.905 6.685 1.00 0.53 ATOM 1207 C LYS 302 -76.031 -31.900 6.747 1.00 0.53 ATOM 1208 O LYS 302 -76.205 -30.764 7.182 1.00 0.53 ATOM 1209 N ASN 303 -74.858 -32.425 6.275 1.00 0.33 ATOM 1210 CA ASN 303 -73.727 -31.746 5.784 1.00 0.33 ATOM 1211 C ASN 303 -73.114 -30.638 6.604 1.00 0.33 ATOM 1212 O ASN 303 -72.969 -29.518 6.117 1.00 0.33 ATOM 1213 N LEU 304 -72.740 -30.937 7.853 1.00 0.06 ATOM 1214 CA LEU 304 -71.719 -30.350 8.593 1.00 0.06 ATOM 1215 C LEU 304 -70.535 -31.325 8.691 1.00 0.06 ATOM 1216 O LEU 304 -70.668 -32.400 9.271 1.00 0.06 ATOM 1217 N GLY 305 -69.398 -30.962 8.143 1.00 1.00 ATOM 1218 CA GLY 305 -68.153 -31.575 8.552 1.00 1.00 ATOM 1219 C GLY 305 -68.120 -33.036 8.135 1.00 1.00 ATOM 1220 O GLY 305 -67.544 -33.865 8.837 1.00 1.00 ATOM 1221 N PHE 306 -68.700 -33.481 7.004 1.00 0.22 ATOM 1222 CA PHE 306 -67.972 -34.101 5.870 1.00 0.22 ATOM 1223 C PHE 306 -66.919 -33.131 5.343 1.00 0.22 ATOM 1224 O PHE 306 -67.245 -32.221 4.582 1.00 0.22 ATOM 1225 N THR 307 -65.595 -33.294 5.727 1.00 0.21 ATOM 1226 CA THR 307 -64.626 -32.479 4.857 1.00 0.21 ATOM 1227 C THR 307 -63.487 -33.370 4.372 1.00 0.21 ATOM 1228 O THR 307 -63.111 -34.317 5.058 1.00 0.21 ATOM 1229 N PHE 308 -63.012 -33.008 3.235 1.00 0.82 ATOM 1230 CA PHE 308 -61.953 -33.771 2.465 1.00 0.82 ATOM 1231 C PHE 308 -60.785 -33.008 2.083 1.00 0.82 ATOM 1232 O PHE 308 -60.908 -31.999 1.393 1.00 0.82 ATOM 1233 N ASP 309 -59.609 -33.368 2.445 1.00 0.83 ATOM 1234 CA ASP 309 -58.351 -32.715 2.021 1.00 0.83 ATOM 1235 C ASP 309 -57.665 -33.600 0.898 1.00 0.83 ATOM 1236 O ASP 309 -57.098 -34.648 1.200 1.00 0.83 ATOM 1237 N PRO 310 -57.755 -33.100 -0.410 1.00 0.43 ATOM 1238 CA PRO 310 -57.164 -33.715 -1.541 1.00 0.43 ATOM 1239 C PRO 310 -55.588 -33.848 -1.311 1.00 0.43 ATOM 1240 O PRO 310 -54.979 -34.816 -1.760 1.00 0.43 ATOM 1241 N LEU 311 -55.081 -32.864 -0.626 1.00 0.14 ATOM 1242 CA LEU 311 -53.579 -32.636 -0.502 1.00 0.14 ATOM 1243 C LEU 311 -53.094 -33.707 0.347 1.00 0.14 ATOM 1244 O LEU 311 -51.978 -34.185 0.159 1.00 0.14 ATOM 1245 N THR 312 -53.945 -34.177 1.380 1.00 0.02 ATOM 1246 CA THR 312 -53.467 -35.140 2.410 1.00 0.02 ATOM 1247 C THR 312 -54.109 -36.443 2.188 1.00 0.02 ATOM 1248 O THR 312 -53.796 -37.411 2.879 1.00 0.02 ATOM 1249 N SER 313 -55.069 -36.461 1.144 1.00 0.18 ATOM 1250 CA SER 313 -55.834 -37.605 1.014 1.00 0.18 ATOM 1251 C SER 313 -56.528 -37.979 2.401 1.00 0.18 ATOM 1252 O SER 313 -56.606 -39.154 2.752 1.00 0.18 ATOM 1253 N LYS 314 -57.032 -36.987 3.177 1.00 0.97 ATOM 1254 CA LYS 314 -57.498 -37.396 4.556 1.00 0.97 ATOM 1255 C LYS 314 -58.885 -36.779 4.596 1.00 0.97 ATOM 1256 O LYS 314 -59.053 -35.618 4.228 1.00 0.97 ATOM 1257 N ILE 315 -59.850 -37.591 5.060 1.00 0.33 ATOM 1258 CA ILE 315 -61.304 -37.273 5.294 1.00 0.33 ATOM 1259 C ILE 315 -61.511 -37.170 6.771 1.00 0.33 ATOM 1260 O ILE 315 -61.125 -38.072 7.512 1.00 0.33 ATOM 1261 N THR 316 -62.169 -35.996 7.235 1.00 0.14 ATOM 1262 CA THR 316 -62.462 -35.839 8.597 1.00 0.14 ATOM 1263 C THR 316 -63.961 -35.758 8.735 1.00 0.14 ATOM 1264 O THR 316 -64.605 -34.994 8.019 1.00 0.14 ATOM 1265 N LEU 317 -64.459 -36.554 9.666 1.00 0.16 ATOM 1266 CA LEU 317 -65.802 -36.552 9.989 1.00 0.16 ATOM 1267 C LEU 317 -65.841 -35.663 11.160 1.00 0.16 ATOM 1268 O LEU 317 -65.483 -36.077 12.261 1.00 0.16 ATOM 1269 N ALA 318 -66.241 -34.459 11.090 1.00 0.62 ATOM 1270 CA ALA 318 -65.692 -33.442 12.071 1.00 0.62 ATOM 1271 C ALA 318 -66.867 -33.279 13.085 1.00 0.62 ATOM 1272 O ALA 318 -66.953 -32.263 13.771 1.00 0.62 ATOM 1273 N GLN 319 -67.728 -34.356 13.107 1.00 0.61 ATOM 1274 CA GLN 319 -69.213 -34.445 13.408 1.00 0.61 ATOM 1275 C GLN 319 -69.673 -35.718 13.961 1.00 0.61 ATOM 1276 O GLN 319 -69.647 -36.735 13.272 1.00 0.61 ATOM 1277 N GLU 320 -70.122 -35.642 15.279 1.00 0.16 ATOM 1278 CA GLU 320 -70.452 -36.699 16.131 1.00 0.16 ATOM 1279 C GLU 320 -71.932 -37.062 15.929 1.00 0.16 ATOM 1280 O GLU 320 -72.744 -36.191 15.626 1.00 0.16 ATOM 1281 N LEU 321 -72.206 -38.382 16.124 1.00 0.99 ATOM 1282 CA LEU 321 -73.491 -38.904 16.090 1.00 0.99 ATOM 1283 C LEU 321 -74.018 -38.630 17.544 1.00 0.99 ATOM 1284 O LEU 321 -73.281 -38.805 18.511 1.00 0.99 ATOM 1285 N ASP 322 -75.362 -38.189 17.639 1.00 0.87 ATOM 1286 CA ASP 322 -76.068 -38.236 18.960 1.00 0.87 ATOM 1287 C ASP 322 -75.983 -39.694 19.550 1.00 0.87 ATOM 1288 O ASP 322 -75.982 -40.665 18.797 1.00 0.87 ATOM 1289 N ALA 323 -75.920 -39.682 20.972 1.00 0.32 ATOM 1290 CA ALA 323 -75.751 -40.999 21.704 1.00 0.32 ATOM 1291 C ALA 323 -76.758 -42.108 21.429 1.00 0.32 ATOM 1292 O ALA 323 -77.956 -41.846 21.353 1.00 0.32 ATOM 1293 N GLU 324 -76.381 -43.330 21.281 1.00 0.26 ATOM 1294 CA GLU 324 -77.236 -44.492 20.969 1.00 0.26 ATOM 1295 C GLU 324 -77.721 -44.355 19.554 1.00 0.26 ATOM 1296 O GLU 324 -78.698 -44.997 19.174 1.00 0.26 ATOM 1297 N ASP 325 -77.113 -43.544 18.666 1.00 0.40 ATOM 1298 CA ASP 325 -77.496 -43.272 17.265 1.00 0.40 ATOM 1299 C ASP 325 -76.912 -44.482 16.557 1.00 0.40 ATOM 1300 O ASP 325 -75.997 -45.118 17.076 1.00 0.40 ATOM 1301 N GLU 326 -77.493 -44.744 15.351 1.00 0.36 ATOM 1302 CA GLU 326 -76.884 -45.865 14.657 1.00 0.36 ATOM 1303 C GLU 326 -76.128 -45.497 13.320 1.00 0.36 ATOM 1304 O GLU 326 -76.602 -44.660 12.555 1.00 0.36 ATOM 1305 N VAL 327 -74.964 -46.161 13.094 1.00 0.59 ATOM 1306 CA VAL 327 -74.029 -45.597 12.030 1.00 0.59 ATOM 1307 C VAL 327 -74.217 -46.394 10.748 1.00 0.59 ATOM 1308 O VAL 327 -73.938 -47.590 10.720 1.00 0.59 ATOM 1309 N VAL 328 -74.688 -45.658 9.723 1.00 0.52 ATOM 1310 CA VAL 328 -75.099 -46.211 8.435 1.00 0.52 ATOM 1311 C VAL 328 -74.356 -45.491 7.252 1.00 0.52 ATOM 1312 O VAL 328 -74.640 -44.331 6.961 1.00 0.52 ATOM 1313 N VAL 329 -73.425 -46.215 6.603 1.00 0.98 ATOM 1314 CA VAL 329 -72.954 -45.882 5.276 1.00 0.98 ATOM 1315 C VAL 329 -73.861 -45.949 4.092 1.00 0.98 ATOM 1316 O VAL 329 -74.762 -46.783 4.053 1.00 0.98 ATOM 1317 N ILE 330 -73.732 -45.089 2.987 1.00 0.11 ATOM 1318 CA ILE 330 -74.894 -44.703 2.279 1.00 0.11 ATOM 1319 C ILE 330 -74.845 -44.642 0.757 1.00 0.11 ATOM 1320 O ILE 330 -75.772 -44.135 0.129 1.00 0.11 ATOM 1321 N ILE 331 -73.786 -45.149 0.021 1.00 0.47 ATOM 1322 CA ILE 331 -73.029 -44.406 -0.986 1.00 0.47 ATOM 1323 C ILE 331 -73.365 -44.746 -2.469 1.00 0.47 ATOM 1324 O ILE 331 -72.998 -45.813 -2.954 1.00 0.47 ATOM 1325 N ASN 332 -74.034 -43.818 -3.092 1.00 0.27 ATOM 1326 CA ASN 332 -75.051 -43.904 -4.146 1.00 0.27 ATOM 1327 C ASN 332 -74.711 -42.935 -5.281 1.00 0.27 ATOM 1328 O ASN 332 -75.359 -42.957 -6.325 1.00 0.27 TER END