####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 57 ( 228), selected 57 , name T1085TS217_1-D3 # Molecule2: number of CA atoms 57 ( 451), selected 57 , name T1085-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1085TS217_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 57 524 - 580 3.01 3.01 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 52 527 - 578 1.91 3.23 LCS_AVERAGE: 87.50 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 534 - 560 0.98 3.43 LCS_AVERAGE: 33.92 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 57 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 524 A 524 3 4 57 0 3 3 3 3 4 4 4 5 5 8 8 9 14 55 56 57 57 57 57 LCS_GDT Q 525 Q 525 4 29 57 3 3 5 18 21 27 34 45 48 51 55 55 55 56 56 56 57 57 57 57 LCS_GDT T 526 T 526 4 50 57 3 6 11 18 24 32 41 47 50 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT K 527 K 527 4 52 57 3 5 11 20 28 38 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT P 528 P 528 4 52 57 3 6 15 32 42 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT T 529 T 529 17 52 57 3 3 7 17 28 45 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT L 530 L 530 17 52 57 4 15 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT V 531 V 531 17 52 57 3 8 30 41 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT E 532 E 532 17 52 57 5 23 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT L 533 L 533 17 52 57 8 15 26 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT E 534 E 534 27 52 57 8 19 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT K 535 K 535 27 52 57 8 23 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT A 536 A 536 27 52 57 8 23 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT R 537 R 537 27 52 57 8 23 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT T 538 T 538 27 52 57 8 22 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT H 539 H 539 27 52 57 8 22 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT L 540 L 540 27 52 57 8 23 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT K 541 K 541 27 52 57 6 22 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT Q 542 Q 542 27 52 57 8 23 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT N 543 N 543 27 52 57 8 23 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT P 544 P 544 27 52 57 8 23 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT F 545 F 545 27 52 57 4 15 31 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT M 546 M 546 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT A 547 A 547 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT S 548 S 548 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT A 549 A 549 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT I 550 I 550 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT E 551 E 551 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT E 552 E 552 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT A 553 A 553 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT L 554 L 554 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT V 555 V 555 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT L 556 L 556 27 52 57 12 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT E 557 E 557 27 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT K 558 K 558 27 52 57 4 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT K 559 K 559 27 52 57 11 24 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT A 560 A 560 27 52 57 8 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT Q 561 Q 561 17 52 57 3 4 7 28 40 46 48 50 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT R 562 R 562 15 52 57 3 3 20 36 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT K 563 K 563 15 52 57 4 17 35 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT S 564 S 564 15 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT M 565 M 565 15 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT V 566 V 566 15 52 57 13 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT E 567 E 567 15 52 57 12 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT Y 568 Y 568 15 52 57 13 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT L 569 L 569 15 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT E 570 E 570 15 52 57 11 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT G 571 G 571 15 52 57 13 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT R 572 R 572 15 52 57 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT L 573 L 573 15 52 57 11 26 30 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT A 574 A 574 15 52 57 11 26 31 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT T 575 T 575 15 52 57 11 26 31 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT L 576 L 576 15 52 57 4 19 29 37 44 46 48 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT A 577 A 577 15 52 57 3 4 15 30 34 46 48 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT K 578 K 578 4 52 57 3 3 5 6 34 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 LCS_GDT K 579 K 579 4 51 57 3 3 4 5 8 11 28 34 45 50 55 55 55 56 56 56 57 57 57 57 LCS_GDT D 580 D 580 4 5 57 3 3 4 4 8 10 19 28 37 44 47 52 54 56 56 56 57 57 57 57 LCS_AVERAGE LCS_A: 73.81 ( 33.92 87.50 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 26 37 43 45 46 49 51 51 53 55 55 55 56 56 56 57 57 57 57 GDT PERCENT_AT 24.56 45.61 64.91 75.44 78.95 80.70 85.96 89.47 89.47 92.98 96.49 96.49 96.49 98.25 98.25 98.25 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.62 0.99 1.18 1.27 1.33 1.72 1.82 1.77 2.12 2.51 2.51 2.51 2.70 2.70 2.70 3.01 3.01 3.01 3.01 GDT RMS_ALL_AT 4.16 3.99 3.31 3.40 3.37 3.40 3.17 3.20 3.31 3.14 3.04 3.04 3.04 3.03 3.03 3.03 3.01 3.01 3.01 3.01 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 524 A 524 11.716 1 0.538 0.538 14.251 0.000 0.000 - LGA Q 525 Q 525 8.689 5 0.358 0.358 9.832 0.000 0.000 - LGA T 526 T 526 7.011 3 0.521 0.521 7.970 0.000 0.000 - LGA K 527 K 527 5.100 5 0.565 0.565 5.336 9.545 4.242 - LGA P 528 P 528 3.477 3 0.308 0.308 4.578 24.091 13.766 - LGA T 529 T 529 3.442 3 0.458 0.458 3.442 27.727 15.844 - LGA L 530 L 530 1.818 4 0.411 0.411 3.410 36.364 18.182 - LGA V 531 V 531 2.120 3 0.068 0.068 2.234 48.182 27.532 - LGA E 532 E 532 1.045 5 0.092 0.092 1.888 62.273 27.677 - LGA L 533 L 533 1.997 4 0.049 0.049 1.997 50.909 25.455 - LGA E 534 E 534 1.656 5 0.136 0.136 2.073 47.727 21.212 - LGA K 535 K 535 0.908 5 0.188 0.188 1.883 65.909 29.293 - LGA A 536 A 536 1.005 1 0.025 0.025 1.027 73.636 58.909 - LGA R 537 R 537 1.251 7 0.170 0.170 1.610 61.818 22.479 - LGA T 538 T 538 1.196 3 0.061 0.061 1.196 65.455 37.403 - LGA H 539 H 539 1.077 6 0.040 0.040 1.205 65.455 26.182 - LGA L 540 L 540 0.961 4 0.094 0.094 1.206 73.636 36.818 - LGA K 541 K 541 1.379 5 0.040 0.040 1.379 65.455 29.091 - LGA Q 542 Q 542 0.859 5 0.034 0.034 1.030 77.727 34.545 - LGA N 543 N 543 0.820 4 0.074 0.074 0.881 81.818 40.909 - LGA P 544 P 544 1.119 3 0.139 0.139 2.092 59.091 33.766 - LGA F 545 F 545 2.058 7 0.061 0.061 2.076 44.545 16.198 - LGA M 546 M 546 1.401 4 0.073 0.073 1.401 65.455 32.727 - LGA A 547 A 547 0.619 1 0.043 0.043 1.009 82.273 65.818 - LGA S 548 S 548 0.892 2 0.087 0.087 1.371 73.636 49.091 - LGA A 549 A 549 1.456 1 0.042 0.042 1.456 65.455 52.364 - LGA I 550 I 550 0.723 4 0.031 0.031 1.060 77.727 38.864 - LGA E 551 E 551 0.916 5 0.045 0.045 1.363 73.636 32.727 - LGA E 552 E 552 1.559 5 0.037 0.037 1.821 54.545 24.242 - LGA A 553 A 553 1.354 1 0.071 0.071 1.528 61.818 49.455 - LGA L 554 L 554 1.295 4 0.036 0.036 1.323 65.455 32.727 - LGA V 555 V 555 1.057 3 0.039 0.039 1.187 73.636 42.078 - LGA L 556 L 556 0.871 4 0.039 0.039 1.215 73.636 36.818 - LGA E 557 E 557 1.325 5 0.117 0.117 1.679 61.818 27.475 - LGA K 558 K 558 1.277 5 0.151 0.151 1.985 61.818 27.475 - LGA K 559 K 559 0.679 5 0.440 0.440 3.703 56.364 25.051 - LGA A 560 A 560 1.913 1 0.230 0.230 2.567 45.455 36.364 - LGA Q 561 Q 561 4.667 5 0.430 0.430 4.667 16.818 7.475 - LGA R 562 R 562 2.742 7 0.463 0.463 2.872 32.727 11.901 - LGA K 563 K 563 2.762 5 0.445 0.445 2.762 45.000 20.000 - LGA S 564 S 564 0.770 2 0.208 0.208 1.159 82.273 54.848 - LGA M 565 M 565 0.598 4 0.071 0.071 0.621 86.364 43.182 - LGA V 566 V 566 0.167 3 0.032 0.032 0.413 100.000 57.143 - LGA E 567 E 567 0.312 5 0.077 0.077 0.312 100.000 44.444 - LGA Y 568 Y 568 0.386 8 0.035 0.035 0.540 95.455 31.818 - LGA L 569 L 569 0.606 4 0.025 0.025 0.917 86.364 43.182 - LGA E 570 E 570 0.707 5 0.034 0.034 1.210 82.273 36.566 - LGA G 571 G 571 0.545 0 0.050 0.050 0.735 81.818 81.818 - LGA R 572 R 572 0.971 7 0.046 0.046 1.453 73.636 26.777 - LGA L 573 L 573 1.759 4 0.054 0.054 2.033 51.364 25.682 - LGA A 574 A 574 1.920 1 0.095 0.095 2.679 41.818 33.455 - LGA T 575 T 575 1.925 3 0.133 0.133 2.246 44.545 25.455 - LGA L 576 L 576 2.916 4 0.246 0.246 2.962 27.273 13.636 - LGA A 577 A 577 3.712 1 0.189 0.189 3.712 20.909 16.727 - LGA K 578 K 578 3.820 5 0.180 0.180 6.365 7.273 3.232 - LGA K 579 K 579 7.486 5 0.463 0.463 10.656 0.000 0.000 - LGA D 580 D 580 8.582 4 0.661 0.661 10.145 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 57 228 228 100.00 451 228 50.55 57 0 SUMMARY(RMSD_GDC): 3.013 3.030 3.030 54.561 29.300 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 57 57 4.0 51 1.82 77.193 83.018 2.655 LGA_LOCAL RMSD: 1.821 Number of atoms: 51 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.197 Number of assigned atoms: 57 Std_ASGN_ATOMS RMSD: 3.013 Standard rmsd on all 57 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.567079 * X + -0.783255 * Y + -0.254818 * Z + 43.221897 Y_new = -0.045326 * X + 0.279228 * Y + -0.959154 * Z + 85.170830 Z_new = 0.822415 * X + 0.555466 * Y + 0.122843 * Z + 100.548149 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.079758 -0.965644 1.353146 [DEG: -4.5698 -55.3273 77.5296 ] ZXZ: -0.259672 1.447642 0.976766 [DEG: -14.8781 82.9438 55.9646 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1085TS217_1-D3 REMARK 2: T1085-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1085TS217_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 57 57 4.0 51 1.82 83.018 3.01 REMARK ---------------------------------------------------------- MOLECULE T1085TS217_1-D3 PFRMAT TS TARGET T1085 MODEL 1 PARENT N/A ATOM 2093 N ALA 524 31.454 39.965 46.313 1.00 0.46 ATOM 2094 CA ALA 524 31.593 39.018 47.353 1.00 0.46 ATOM 2095 C ALA 524 30.250 38.951 47.911 1.00 0.46 ATOM 2096 O ALA 524 29.749 37.862 48.180 1.00 0.46 ATOM 2097 N GLN 525 29.668 40.144 48.075 1.00 0.60 ATOM 2098 CA GLN 525 28.302 40.113 48.582 1.00 0.60 ATOM 2099 C GLN 525 27.514 39.400 47.595 1.00 0.60 ATOM 2100 O GLN 525 26.921 38.371 47.908 1.00 0.60 ATOM 2101 N THR 526 27.448 39.878 46.329 1.00 0.04 ATOM 2102 CA THR 526 26.622 39.139 45.402 1.00 0.04 ATOM 2103 C THR 526 27.163 37.959 44.668 1.00 0.04 ATOM 2104 O THR 526 26.583 36.877 44.727 1.00 0.04 ATOM 2105 N LYS 527 28.313 38.255 43.986 1.00 0.30 ATOM 2106 CA LYS 527 28.610 37.262 42.866 1.00 0.30 ATOM 2107 C LYS 527 29.807 37.554 41.933 1.00 0.30 ATOM 2108 O LYS 527 30.843 36.903 42.037 1.00 0.30 ATOM 2109 N PRO 528 29.835 38.493 40.978 1.00 0.02 ATOM 2110 CA PRO 528 30.724 38.183 39.852 1.00 0.02 ATOM 2111 C PRO 528 32.252 38.129 40.223 1.00 0.02 ATOM 2112 O PRO 528 32.997 39.053 39.902 1.00 0.02 ATOM 2113 N THR 529 32.668 37.006 40.902 1.00 0.75 ATOM 2114 CA THR 529 34.013 36.793 41.320 1.00 0.75 ATOM 2115 C THR 529 34.958 36.595 40.234 1.00 0.75 ATOM 2116 O THR 529 36.048 37.165 40.253 1.00 0.75 ATOM 2117 N LEU 530 34.579 35.772 39.217 1.00 0.35 ATOM 2118 CA LEU 530 35.478 35.411 38.156 1.00 0.35 ATOM 2119 C LEU 530 35.876 36.621 37.389 1.00 0.35 ATOM 2120 O LEU 530 37.058 36.816 37.115 1.00 0.35 ATOM 2121 N VAL 531 34.872 37.483 37.025 1.00 0.61 ATOM 2122 CA VAL 531 35.174 38.646 36.244 1.00 0.61 ATOM 2123 C VAL 531 36.127 39.530 37.070 1.00 0.61 ATOM 2124 O VAL 531 37.076 40.088 36.526 1.00 0.61 ATOM 2125 N GLU 532 35.875 39.646 38.369 1.00 0.41 ATOM 2126 CA GLU 532 36.719 40.487 39.197 1.00 0.41 ATOM 2127 C GLU 532 38.116 39.969 39.216 1.00 0.41 ATOM 2128 O GLU 532 39.062 40.746 39.115 1.00 0.41 ATOM 2129 N LEU 533 38.280 38.633 39.341 1.00 0.01 ATOM 2130 CA LEU 533 39.578 38.032 39.436 1.00 0.01 ATOM 2131 C LEU 533 40.338 38.268 38.179 1.00 0.01 ATOM 2132 O LEU 533 41.519 38.607 38.227 1.00 0.01 ATOM 2133 N GLU 534 39.672 38.101 37.017 1.00 0.84 ATOM 2134 CA GLU 534 40.327 38.246 35.747 1.00 0.84 ATOM 2135 C GLU 534 40.799 39.654 35.582 1.00 0.84 ATOM 2136 O GLU 534 41.898 39.881 35.083 1.00 0.84 ATOM 2137 N LYS 535 39.968 40.659 36.011 1.00 0.38 ATOM 2138 CA LYS 535 40.351 42.034 35.869 1.00 0.38 ATOM 2139 C LYS 535 41.570 42.302 36.699 1.00 0.38 ATOM 2140 O LYS 535 42.481 42.997 36.252 1.00 0.38 ATOM 2141 N ALA 536 41.621 41.752 37.930 1.00 0.69 ATOM 2142 CA ALA 536 42.712 42.007 38.828 1.00 0.69 ATOM 2143 C ALA 536 43.978 41.479 38.242 1.00 0.69 ATOM 2144 O ALA 536 45.011 42.141 38.310 1.00 0.69 ATOM 2145 N ARG 537 43.913 40.270 37.648 1.00 0.42 ATOM 2146 CA ARG 537 45.066 39.625 37.091 1.00 0.42 ATOM 2147 C ARG 537 45.598 40.453 35.972 1.00 0.42 ATOM 2148 O ARG 537 46.808 40.625 35.854 1.00 0.42 ATOM 2149 N THR 538 44.705 41.000 35.118 1.00 0.93 ATOM 2150 CA THR 538 45.166 41.772 34.000 1.00 0.93 ATOM 2151 C THR 538 45.893 42.968 34.510 1.00 0.93 ATOM 2152 O THR 538 46.940 43.327 33.977 1.00 0.93 ATOM 2153 N HIS 539 45.356 43.611 35.564 1.00 0.32 ATOM 2154 CA HIS 539 45.977 44.786 36.095 1.00 0.32 ATOM 2155 C HIS 539 47.352 44.426 36.567 1.00 0.32 ATOM 2156 O HIS 539 48.307 45.148 36.294 1.00 0.32 ATOM 2157 N LEU 540 47.485 43.292 37.284 1.00 0.78 ATOM 2158 CA LEU 540 48.763 42.933 37.821 1.00 0.78 ATOM 2159 C LEU 540 49.712 42.737 36.680 1.00 0.78 ATOM 2160 O LEU 540 50.858 43.172 36.751 1.00 0.78 ATOM 2161 N LYS 541 49.263 42.084 35.595 1.00 0.55 ATOM 2162 CA LYS 541 50.162 41.823 34.509 1.00 0.55 ATOM 2163 C LYS 541 50.653 43.141 33.997 1.00 0.55 ATOM 2164 O LYS 541 51.837 43.286 33.702 1.00 0.55 ATOM 2165 N GLN 542 49.734 44.116 33.896 1.00 0.30 ATOM 2166 CA GLN 542 50.018 45.425 33.392 1.00 0.30 ATOM 2167 C GLN 542 50.931 46.140 34.337 1.00 0.30 ATOM 2168 O GLN 542 51.820 46.870 33.903 1.00 0.30 ATOM 2169 N ASN 543 50.742 45.944 35.618 1.00 0.64 ATOM 2170 CA ASN 543 51.592 46.601 36.564 1.00 0.64 ATOM 2171 C ASN 543 51.996 45.502 37.562 1.00 0.64 ATOM 2172 O ASN 543 51.330 45.316 38.578 1.00 0.64 ATOM 2173 N PRO 544 53.056 44.779 37.318 1.00 0.09 ATOM 2174 CA PRO 544 53.412 43.680 38.194 1.00 0.09 ATOM 2175 C PRO 544 53.666 44.373 39.481 1.00 0.09 ATOM 2176 O PRO 544 53.532 43.770 40.543 1.00 0.09 ATOM 2177 N PHE 545 54.043 45.697 39.459 1.00 0.29 ATOM 2178 CA PHE 545 54.695 46.244 40.645 1.00 0.29 ATOM 2179 C PHE 545 53.592 46.387 41.776 1.00 0.29 ATOM 2180 O PHE 545 53.921 46.684 42.923 1.00 0.29 ATOM 2181 N MET 546 52.312 46.164 41.417 1.00 0.14 ATOM 2182 CA MET 546 51.368 46.451 42.440 1.00 0.14 ATOM 2183 C MET 546 51.088 45.324 43.285 1.00 0.14 ATOM 2184 O MET 546 50.419 44.385 42.858 1.00 0.14 ATOM 2185 N ALA 547 51.615 45.432 44.522 1.00 0.53 ATOM 2186 CA ALA 547 51.479 44.497 45.594 1.00 0.53 ATOM 2187 C ALA 547 50.055 44.439 46.039 1.00 0.53 ATOM 2188 O ALA 547 49.556 43.366 46.369 1.00 0.53 ATOM 2189 N SER 548 49.371 45.601 46.047 1.00 0.43 ATOM 2190 CA SER 548 48.012 45.700 46.508 1.00 0.43 ATOM 2191 C SER 548 47.120 44.869 45.641 1.00 0.43 ATOM 2192 O SER 548 46.281 44.130 46.151 1.00 0.43 ATOM 2193 N ALA 549 47.286 44.966 44.305 1.00 0.89 ATOM 2194 CA ALA 549 46.457 44.249 43.376 1.00 0.89 ATOM 2195 C ALA 549 46.665 42.786 43.605 1.00 0.89 ATOM 2196 O ALA 549 45.706 42.018 43.589 1.00 0.89 ATOM 2197 N ILE 550 47.932 42.379 43.830 1.00 0.55 ATOM 2198 CA ILE 550 48.252 40.994 44.011 1.00 0.55 ATOM 2199 C ILE 550 47.540 40.495 45.226 1.00 0.55 ATOM 2200 O ILE 550 46.957 39.414 45.198 1.00 0.55 ATOM 2201 N GLU 551 47.562 41.274 46.328 1.00 0.87 ATOM 2202 CA GLU 551 46.926 40.830 47.601 1.00 0.87 ATOM 2203 C GLU 551 45.456 40.652 47.384 1.00 0.87 ATOM 2204 O GLU 551 44.871 39.695 47.886 1.00 0.87 ATOM 2205 N GLU 552 44.835 41.574 46.623 1.00 0.55 ATOM 2206 CA GLU 552 43.415 41.528 46.389 1.00 0.55 ATOM 2207 C GLU 552 43.086 40.284 45.627 1.00 0.55 ATOM 2208 O GLU 552 42.086 39.632 45.914 1.00 0.55 ATOM 2209 N ALA 553 43.936 39.927 44.639 1.00 0.27 ATOM 2210 CA ALA 553 43.709 38.790 43.794 1.00 0.27 ATOM 2211 C ALA 553 43.708 37.549 44.615 1.00 0.27 ATOM 2212 O ALA 553 42.859 36.681 44.422 1.00 0.27 ATOM 2213 N LEU 554 44.666 37.449 45.559 1.00 0.49 ATOM 2214 CA LEU 554 44.877 36.304 46.396 1.00 0.49 ATOM 2215 C LEU 554 43.643 36.072 47.201 1.00 0.49 ATOM 2216 O LEU 554 43.181 34.937 47.309 1.00 0.49 ATOM 2217 N VAL 555 43.085 37.156 47.777 1.00 0.37 ATOM 2218 CA VAL 555 41.939 37.093 48.637 1.00 0.37 ATOM 2219 C VAL 555 40.770 36.578 47.866 1.00 0.37 ATOM 2220 O VAL 555 40.032 35.728 48.359 1.00 0.37 ATOM 2221 N LEU 556 40.583 37.081 46.628 1.00 0.95 ATOM 2222 CA LEU 556 39.459 36.740 45.812 1.00 0.95 ATOM 2223 C LEU 556 39.520 35.284 45.507 1.00 0.95 ATOM 2224 O LEU 556 38.509 34.592 45.599 1.00 0.95 ATOM 2225 N GLU 557 40.747 34.795 45.136 1.00 0.53 ATOM 2226 CA GLU 557 40.975 33.435 44.775 1.00 0.53 ATOM 2227 C GLU 557 40.727 32.586 45.961 1.00 0.53 ATOM 2228 O GLU 557 40.162 31.501 45.836 1.00 0.53 ATOM 2229 N LYS 558 41.118 33.016 47.166 1.00 0.02 ATOM 2230 CA LYS 558 40.875 32.184 48.317 1.00 0.02 ATOM 2231 C LYS 558 39.392 32.025 48.489 1.00 0.02 ATOM 2232 O LYS 558 38.917 30.922 48.750 1.00 0.02 ATOM 2233 N LYS 559 38.625 33.122 48.341 1.00 0.80 ATOM 2234 CA LYS 559 37.210 33.038 48.577 1.00 0.80 ATOM 2235 C LYS 559 36.609 32.072 47.606 1.00 0.80 ATOM 2236 O LYS 559 35.808 31.225 47.995 1.00 0.80 ATOM 2237 N ALA 560 36.993 32.182 46.323 1.00 0.15 ATOM 2238 CA ALA 560 36.468 31.333 45.291 1.00 0.15 ATOM 2239 C ALA 560 36.958 29.948 45.501 1.00 0.15 ATOM 2240 O ALA 560 36.207 28.994 45.313 1.00 0.15 ATOM 2241 N GLN 561 38.198 29.752 45.896 1.00 0.12 ATOM 2242 CA GLN 561 38.888 28.560 46.123 1.00 0.12 ATOM 2243 C GLN 561 39.311 27.865 44.833 1.00 0.12 ATOM 2244 O GLN 561 38.783 26.804 44.503 1.00 0.12 ATOM 2245 N ARG 562 40.291 28.411 44.030 1.00 0.22 ATOM 2246 CA ARG 562 40.917 27.582 43.034 1.00 0.22 ATOM 2247 C ARG 562 42.159 26.894 43.607 1.00 0.22 ATOM 2248 O ARG 562 42.688 25.969 42.996 1.00 0.22 ATOM 2249 N LYS 563 42.724 27.269 44.809 1.00 0.64 ATOM 2250 CA LYS 563 43.717 26.603 45.592 1.00 0.64 ATOM 2251 C LYS 563 45.190 26.805 45.017 1.00 0.64 ATOM 2252 O LYS 563 45.982 27.544 45.596 1.00 0.64 ATOM 2253 N SER 564 45.457 26.163 43.945 1.00 0.17 ATOM 2254 CA SER 564 46.773 26.228 43.383 1.00 0.17 ATOM 2255 C SER 564 47.057 27.629 42.950 1.00 0.17 ATOM 2256 O SER 564 48.171 28.116 43.128 1.00 0.17 ATOM 2257 N MET 565 46.056 28.319 42.374 1.00 0.11 ATOM 2258 CA MET 565 46.297 29.648 41.892 1.00 0.11 ATOM 2259 C MET 565 46.625 30.543 43.040 1.00 0.11 ATOM 2260 O MET 565 47.500 31.398 42.924 1.00 0.11 ATOM 2261 N VAL 566 45.928 30.357 44.178 1.00 0.73 ATOM 2262 CA VAL 566 46.110 31.177 45.341 1.00 0.73 ATOM 2263 C VAL 566 47.517 31.042 45.809 1.00 0.73 ATOM 2264 O VAL 566 48.155 32.040 46.139 1.00 0.73 ATOM 2265 N GLU 567 48.038 29.798 45.844 1.00 0.31 ATOM 2266 CA GLU 567 49.367 29.548 46.321 1.00 0.31 ATOM 2267 C GLU 567 50.350 30.224 45.423 1.00 0.31 ATOM 2268 O GLU 567 51.304 30.834 45.902 1.00 0.31 ATOM 2269 N TYR 568 50.115 30.126 44.102 1.00 0.67 ATOM 2270 CA TYR 568 51.041 30.715 43.144 1.00 0.67 ATOM 2271 C TYR 568 51.064 32.197 43.336 1.00 0.67 ATOM 2272 O TYR 568 52.134 32.800 43.342 1.00 0.67 ATOM 2273 N LEU 569 49.875 32.809 43.505 1.00 0.75 ATOM 2274 CA LEU 569 49.769 34.235 43.618 1.00 0.75 ATOM 2275 C LEU 569 50.448 34.744 44.845 1.00 0.75 ATOM 2276 O LEU 569 51.119 35.772 44.796 1.00 0.75 ATOM 2277 N GLU 570 50.303 34.038 45.985 1.00 0.33 ATOM 2278 CA GLU 570 50.902 34.508 47.200 1.00 0.33 ATOM 2279 C GLU 570 52.385 34.514 47.052 1.00 0.33 ATOM 2280 O GLU 570 53.041 35.472 47.452 1.00 0.33 ATOM 2281 N GLY 571 52.948 33.443 46.465 1.00 0.43 ATOM 2282 CA GLY 571 54.372 33.347 46.361 1.00 0.43 ATOM 2283 C GLY 571 54.888 34.480 45.539 1.00 0.43 ATOM 2284 O GLY 571 55.903 35.081 45.886 1.00 0.43 ATOM 2285 N ARG 572 54.193 34.802 44.434 1.00 0.19 ATOM 2286 CA ARG 572 54.659 35.884 43.619 1.00 0.19 ATOM 2287 C ARG 572 54.656 37.125 44.353 1.00 0.19 ATOM 2288 O ARG 572 55.596 37.908 44.243 1.00 0.19 ATOM 2289 N LEU 573 53.627 37.429 45.168 1.00 0.18 ATOM 2290 CA LEU 573 53.607 38.662 45.896 1.00 0.18 ATOM 2291 C LEU 573 54.750 38.689 46.854 1.00 0.18 ATOM 2292 O LEU 573 55.419 39.711 46.987 1.00 0.18 ATOM 2293 N ALA 574 55.014 37.561 47.544 1.00 0.26 ATOM 2294 CA ALA 574 56.085 37.545 48.498 1.00 0.26 ATOM 2295 C ALA 574 57.368 37.793 47.779 1.00 0.26 ATOM 2296 O ALA 574 58.193 38.578 48.242 1.00 0.26 ATOM 2297 N THR 575 57.565 37.135 46.627 1.00 0.59 ATOM 2298 CA THR 575 58.818 37.312 45.964 1.00 0.59 ATOM 2299 C THR 575 58.958 38.749 45.576 1.00 0.59 ATOM 2300 O THR 575 60.018 39.339 45.773 1.00 0.59 ATOM 2301 N LEU 576 57.872 39.316 45.026 1.00 0.48 ATOM 2302 CA LEU 576 57.959 40.714 44.524 1.00 0.48 ATOM 2303 C LEU 576 58.312 41.584 45.674 1.00 0.48 ATOM 2304 O LEU 576 59.243 42.381 45.581 1.00 0.48 ATOM 2305 N ALA 577 57.618 41.472 46.779 1.00 0.79 ATOM 2306 CA ALA 577 57.681 42.260 47.911 1.00 0.79 ATOM 2307 C ALA 577 58.958 41.994 48.761 1.00 0.79 ATOM 2308 O ALA 577 59.816 42.865 48.874 1.00 0.79 ATOM 2309 N LYS 578 59.131 40.863 49.343 1.00 0.72 ATOM 2310 CA LYS 578 60.148 40.562 50.453 1.00 0.72 ATOM 2311 C LYS 578 59.578 41.256 51.656 1.00 0.72 ATOM 2312 O LYS 578 59.420 40.639 52.707 1.00 0.72 ATOM 2313 N LYS 579 59.256 42.561 51.499 1.00 0.17 ATOM 2314 CA LYS 579 59.270 43.297 52.759 1.00 0.17 ATOM 2315 C LYS 579 58.003 43.544 53.420 1.00 0.17 ATOM 2316 O LYS 579 57.966 43.724 54.635 1.00 0.17 ATOM 2317 N ASP 580 56.929 43.546 52.586 1.00 0.19 ATOM 2318 CA ASP 580 55.699 43.810 53.136 1.00 0.19 ATOM 2319 C ASP 580 54.997 42.491 53.683 1.00 0.19 ATOM 2320 O ASP 580 54.057 42.575 54.471 1.00 0.19 TER END