####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 04/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 93 ( 372), selected 93 , name T1087TS217_1 # Molecule2: number of CA atoms 93 ( 707), selected 93 , name T1087.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1087TS217_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 93 1 - 93 3.96 3.96 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 81 13 - 93 1.99 4.58 LCS_AVERAGE: 76.71 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 63 30 - 92 0.98 5.21 LCS_AVERAGE: 48.91 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 93 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 1 G 1 3 5 93 0 3 3 4 5 5 15 41 48 65 79 82 86 88 90 92 93 93 93 93 LCS_GDT A 2 A 2 3 5 93 3 3 3 4 5 6 15 18 22 35 61 71 79 87 90 92 93 93 93 93 LCS_GDT M 3 M 3 3 5 93 3 3 3 4 5 6 15 18 42 52 61 72 79 86 90 92 93 93 93 93 LCS_GDT E 4 E 4 3 7 93 3 3 4 6 8 10 21 34 45 55 70 79 86 88 90 92 93 93 93 93 LCS_GDT V 5 V 5 3 7 93 4 4 4 6 8 11 22 34 47 58 71 81 86 88 90 92 93 93 93 93 LCS_GDT V 6 V 6 3 7 93 3 3 4 6 7 8 10 20 25 41 53 62 69 81 87 92 93 93 93 93 LCS_GDT P 7 P 7 4 7 93 4 4 4 6 8 11 14 31 39 55 70 79 86 88 90 92 93 93 93 93 LCS_GDT A 8 A 8 4 7 93 4 4 4 6 8 11 19 34 43 56 71 82 86 88 90 92 93 93 93 93 LCS_GDT P 9 P 9 4 7 93 4 4 4 6 8 11 14 31 39 55 72 82 86 88 90 92 93 93 93 93 LCS_GDT E 10 E 10 4 7 93 3 4 4 6 8 11 14 20 25 36 48 58 73 87 90 92 93 93 93 93 LCS_GDT H 11 H 11 4 5 93 3 4 4 6 11 20 31 44 66 76 81 83 86 88 90 92 93 93 93 93 LCS_GDT P 12 P 12 4 5 93 3 4 4 4 9 37 48 68 76 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 13 A 13 4 81 93 3 4 9 22 45 64 73 77 78 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT N 14 N 14 4 81 93 3 4 6 6 7 55 66 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT I 15 I 15 4 81 93 4 4 6 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT S 16 S 16 4 81 93 4 4 6 28 48 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 17 A 17 4 81 93 4 8 29 48 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT P 18 P 18 4 81 93 4 14 39 63 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 19 A 19 3 81 93 3 4 12 25 59 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT T 20 T 20 3 81 93 14 50 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT S 21 S 21 9 81 93 3 6 8 9 12 13 23 76 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT P 22 P 22 9 81 93 6 7 8 10 30 69 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT T 23 T 23 9 81 93 6 8 33 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 24 E 24 9 81 93 24 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 25 H 25 9 81 93 6 7 57 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT Q 26 Q 26 9 81 93 28 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 27 E 27 9 81 93 6 7 8 15 67 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 28 A 28 29 81 93 4 7 8 44 56 66 69 72 77 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 29 A 29 60 81 93 4 7 8 44 53 63 69 76 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 30 A 30 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT L 31 L 31 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 32 H 32 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 33 K 33 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 34 K 34 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 35 H 35 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 36 A 36 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 37 E 37 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 38 H 38 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 39 H 39 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 40 K 40 63 81 93 23 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT G 41 G 41 63 81 93 23 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT M 42 M 42 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 43 A 43 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT V 44 V 44 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 45 H 45 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 46 H 46 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 47 E 47 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT S 48 S 48 63 81 93 27 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT V 49 V 49 63 81 93 27 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 50 A 50 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 51 A 51 63 81 93 27 52 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 52 E 52 63 81 93 27 52 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT Y 53 Y 53 63 81 93 5 48 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT G 54 G 54 63 81 93 22 48 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 55 K 55 63 81 93 28 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 56 A 56 63 81 93 3 3 34 58 65 70 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT G 57 G 57 63 81 93 21 42 59 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 58 H 58 63 81 93 7 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT P 59 P 59 63 81 93 19 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 60 E 60 63 81 93 19 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT L 61 L 61 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 62 K 62 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 63 K 63 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 64 H 64 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 65 H 65 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 66 E 66 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 67 A 67 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT M 68 M 68 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 69 A 69 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 70 K 70 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 71 H 71 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 72 H 72 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 73 E 73 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 74 A 74 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT L 75 L 75 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 76 A 76 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 77 K 77 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 78 E 78 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 79 H 79 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 80 E 80 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 81 K 81 63 81 93 23 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 82 A 82 63 81 93 26 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 83 A 83 63 81 93 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 84 E 84 63 81 93 21 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT N 85 N 85 63 81 93 21 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT H 86 H 86 63 81 93 23 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT E 87 E 87 63 81 93 26 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 88 K 88 63 81 93 21 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT M 89 M 89 63 81 93 21 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT A 90 A 90 63 81 93 22 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 91 K 91 63 81 93 3 30 61 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT P 92 P 92 63 81 93 3 3 9 27 44 70 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_GDT K 93 K 93 37 81 93 3 3 51 64 67 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 LCS_AVERAGE LCS_A: 75.21 ( 48.91 76.71 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 29 54 62 65 68 71 74 77 79 81 82 83 86 88 90 92 93 93 93 93 GDT PERCENT_AT 31.18 58.06 66.67 69.89 73.12 76.34 79.57 82.80 84.95 87.10 88.17 89.25 92.47 94.62 96.77 98.92 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.38 0.60 0.75 0.85 1.05 1.26 1.46 1.66 1.81 1.99 2.16 2.37 2.91 3.21 3.55 3.82 3.96 3.96 3.96 3.96 GDT RMS_ALL_AT 5.15 5.15 5.09 5.08 4.93 4.82 4.76 4.68 4.66 4.58 4.48 4.38 4.16 4.06 3.99 3.96 3.96 3.96 3.96 3.96 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA G 1 G 1 12.283 0 0.370 0.370 12.346 0.000 0.000 - LGA A 2 A 2 13.273 1 0.604 0.604 13.273 0.000 0.000 - LGA M 3 M 3 14.564 4 0.611 0.611 15.774 0.000 0.000 - LGA E 4 E 4 13.622 5 0.634 0.634 13.622 0.000 0.000 - LGA V 5 V 5 11.520 3 0.134 0.134 13.704 0.000 0.000 - LGA V 6 V 6 13.965 3 0.311 0.311 13.965 0.000 0.000 - LGA P 7 P 7 11.827 3 0.624 0.624 12.734 0.000 0.000 - LGA A 8 A 8 9.960 1 0.124 0.124 12.224 0.000 0.000 - LGA P 9 P 9 9.949 3 0.570 0.570 10.206 0.000 0.000 - LGA E 10 E 10 12.057 5 0.640 0.640 12.936 0.000 0.000 - LGA H 11 H 11 10.047 6 0.350 0.350 10.586 0.000 0.000 - LGA P 12 P 12 8.451 3 0.077 0.077 8.451 0.000 0.000 - LGA A 13 A 13 6.377 1 0.179 0.179 7.164 0.455 0.364 - LGA N 14 N 14 3.912 4 0.503 0.503 3.912 16.818 8.409 - LGA I 15 I 15 2.157 4 0.116 0.116 4.092 28.182 14.091 - LGA S 16 S 16 4.718 2 0.257 0.257 6.647 3.182 2.121 - LGA A 17 A 17 3.789 1 0.204 0.204 3.830 21.818 17.455 - LGA P 18 P 18 2.335 3 0.048 0.048 4.337 24.545 14.026 - LGA A 19 A 19 4.214 1 0.593 0.593 4.214 22.273 17.818 - LGA T 20 T 20 0.604 3 0.233 0.233 2.870 53.182 30.390 - LGA S 21 S 21 4.620 2 0.605 0.605 4.620 21.364 14.242 - LGA P 22 P 22 3.541 3 0.099 0.099 4.206 26.364 15.065 - LGA T 23 T 23 2.047 3 0.075 0.075 2.535 49.091 28.052 - LGA E 24 E 24 0.765 5 0.043 0.043 1.960 70.000 31.111 - LGA H 25 H 25 2.340 6 0.064 0.064 2.580 38.636 15.455 - LGA Q 26 Q 26 0.404 5 0.106 0.106 1.876 70.455 31.313 - LGA E 27 E 27 2.869 5 0.118 0.118 4.796 22.727 10.101 - LGA A 28 A 28 5.018 1 0.134 0.134 6.950 2.727 2.182 - LGA A 29 A 29 5.005 1 0.617 0.617 5.005 7.727 6.182 - LGA A 30 A 30 1.198 1 0.249 0.249 2.523 55.909 44.727 - LGA L 31 L 31 1.725 4 0.085 0.085 1.725 58.182 29.091 - LGA H 32 H 32 1.425 6 0.053 0.053 1.556 61.818 24.727 - LGA K 33 K 33 0.490 5 0.058 0.058 0.873 95.455 42.424 - LGA K 34 K 34 0.756 5 0.014 0.014 0.855 81.818 36.364 - LGA H 35 H 35 1.109 6 0.048 0.048 1.210 65.455 26.182 - LGA A 36 A 36 0.665 1 0.036 0.036 0.838 81.818 65.455 - LGA E 37 E 37 0.682 5 0.061 0.061 0.902 81.818 36.364 - LGA H 38 H 38 1.038 6 0.040 0.040 1.067 69.545 27.818 - LGA H 39 H 39 1.029 6 0.039 0.039 1.064 73.636 29.455 - LGA K 40 K 40 0.705 5 0.052 0.052 0.827 81.818 36.364 - LGA G 41 G 41 0.916 0 0.053 0.053 0.968 81.818 81.818 - LGA M 42 M 42 0.960 4 0.068 0.068 0.960 81.818 40.909 - LGA A 43 A 43 0.432 1 0.055 0.055 0.568 95.455 76.364 - LGA V 44 V 44 0.551 3 0.057 0.057 1.022 82.273 47.013 - LGA H 45 H 45 1.108 6 0.077 0.077 1.108 77.727 31.091 - LGA H 46 H 46 0.704 6 0.057 0.057 0.852 81.818 32.727 - LGA E 47 E 47 0.608 5 0.045 0.045 1.035 77.727 34.545 - LGA S 48 S 48 1.452 2 0.036 0.036 1.689 61.818 41.212 - LGA V 49 V 49 1.401 3 0.054 0.054 1.402 65.455 37.403 - LGA A 50 A 50 0.872 1 0.039 0.039 1.286 69.545 55.636 - LGA A 51 A 51 1.638 1 0.059 0.059 1.940 54.545 43.636 - LGA E 52 E 52 1.850 5 0.083 0.083 1.929 50.909 22.626 - LGA Y 53 Y 53 1.751 8 0.063 0.063 1.751 50.909 16.970 - LGA G 54 G 54 1.745 0 0.057 0.057 1.982 50.909 50.909 - LGA K 55 K 55 1.637 5 0.692 0.692 3.286 39.545 17.576 - LGA A 56 A 56 3.750 1 0.654 0.654 3.750 32.727 26.182 - LGA G 57 G 57 2.019 0 0.245 0.245 2.959 45.455 45.455 - LGA H 58 H 58 1.143 6 0.127 0.127 1.143 73.636 29.455 - LGA P 59 P 59 1.357 3 0.093 0.093 1.357 65.455 37.403 - LGA E 60 E 60 1.561 5 0.089 0.089 1.561 58.182 25.859 - LGA L 61 L 61 0.827 4 0.039 0.039 0.956 86.364 43.182 - LGA K 62 K 62 0.662 5 0.072 0.072 0.763 86.364 38.384 - LGA K 63 K 63 1.006 5 0.019 0.019 1.006 77.727 34.545 - LGA H 64 H 64 0.856 6 0.056 0.056 0.856 81.818 32.727 - LGA H 65 H 65 0.162 6 0.097 0.097 0.444 100.000 40.000 - LGA E 66 E 66 0.745 5 0.043 0.043 1.037 82.273 36.566 - LGA A 67 A 67 0.965 1 0.046 0.046 0.965 81.818 65.455 - LGA M 68 M 68 0.489 4 0.036 0.036 0.541 95.455 47.727 - LGA A 69 A 69 0.345 1 0.056 0.056 0.445 100.000 80.000 - LGA K 70 K 70 0.937 5 0.058 0.058 1.053 73.636 32.727 - LGA H 71 H 71 1.147 6 0.052 0.052 1.147 73.636 29.455 - LGA H 72 H 72 0.489 6 0.038 0.038 0.620 95.455 38.182 - LGA E 73 E 73 0.683 5 0.036 0.036 0.990 86.364 38.384 - LGA A 74 A 74 1.213 1 0.047 0.047 1.213 69.545 55.636 - LGA L 75 L 75 1.240 4 0.057 0.057 1.240 65.455 32.727 - LGA A 76 A 76 0.783 1 0.046 0.046 0.839 81.818 65.455 - LGA K 77 K 77 0.711 5 0.072 0.072 0.874 81.818 36.364 - LGA E 78 E 78 1.063 5 0.049 0.049 1.105 69.545 30.909 - LGA H 79 H 79 1.024 6 0.056 0.056 1.024 77.727 31.091 - LGA E 80 E 80 0.768 5 0.024 0.024 0.833 81.818 36.364 - LGA K 81 K 81 0.736 5 0.029 0.029 0.750 81.818 36.364 - LGA A 82 A 82 0.651 1 0.067 0.067 0.676 81.818 65.455 - LGA A 83 A 83 0.672 1 0.027 0.027 0.672 81.818 65.455 - LGA E 84 E 84 0.679 5 0.020 0.020 0.679 81.818 36.364 - LGA N 85 N 85 0.486 4 0.027 0.027 0.486 100.000 50.000 - LGA H 86 H 86 0.462 6 0.026 0.026 0.467 100.000 40.000 - LGA E 87 E 87 0.431 5 0.046 0.046 0.546 90.909 40.404 - LGA K 88 K 88 0.668 5 0.040 0.040 0.668 81.818 36.364 - LGA M 89 M 89 0.417 4 0.110 0.110 1.001 86.818 43.409 - LGA A 90 A 90 0.317 1 0.088 0.088 0.735 90.909 72.727 - LGA K 91 K 91 1.534 5 0.586 0.586 2.744 48.636 21.616 - LGA P 92 P 92 3.231 3 0.659 0.659 3.231 48.182 27.532 - LGA K 93 K 93 3.238 6 0.689 0.689 5.958 15.455 6.182 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 93 372 372 100.00 707 372 52.62 93 0 SUMMARY(RMSD_GDC): 3.957 3.890 3.890 56.163 30.536 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 93 93 4.0 77 1.66 77.419 78.380 4.375 LGA_LOCAL RMSD: 1.660 Number of atoms: 77 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.675 Number of assigned atoms: 93 Std_ASGN_ATOMS RMSD: 3.957 Standard rmsd on all 93 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.119565 * X + -0.597762 * Y + -0.792707 * Z + 11.575663 Y_new = 0.685349 * X + -0.627379 * Y + 0.369720 * Z + -18.978424 Z_new = -0.718332 * X + -0.499075 * Y + 0.484688 * Z + -0.760168 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.743517 0.801402 -0.800021 [DEG: 99.8962 45.9170 -45.8378 ] ZXZ: -2.007206 1.064790 -2.178003 [DEG: -115.0044 61.0079 -124.7904 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1087TS217_1 REMARK 2: T1087.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1087TS217_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 93 93 4.0 77 1.66 78.380 3.96 REMARK ---------------------------------------------------------- MOLECULE T1087TS217_1 PFRMAT TS TARGET T1087 MODEL 1 PARENT N/A ATOM 1 N GLY 1 11.325 -16.102 -3.364 1.00 0.40 ATOM 2 CA GLY 1 11.045 -15.450 -4.640 1.00 0.40 ATOM 3 C GLY 1 11.634 -14.043 -4.677 1.00 0.40 ATOM 4 O GLY 1 11.359 -13.238 -3.792 1.00 0.40 ATOM 5 N ALA 2 12.420 -13.878 -5.756 1.00 0.11 ATOM 6 CA ALA 2 13.305 -12.803 -6.119 1.00 0.11 ATOM 7 C ALA 2 12.342 -11.503 -6.278 1.00 0.11 ATOM 8 O ALA 2 12.710 -10.408 -5.857 1.00 0.11 ATOM 9 N MET 3 11.269 -11.796 -6.842 1.00 0.68 ATOM 10 CA MET 3 10.165 -10.916 -7.442 1.00 0.68 ATOM 11 C MET 3 9.398 -10.029 -6.634 1.00 0.68 ATOM 12 O MET 3 9.166 -8.886 -7.022 1.00 0.68 ATOM 13 N GLU 4 8.929 -10.400 -5.460 1.00 0.67 ATOM 14 CA GLU 4 7.935 -9.508 -4.937 1.00 0.67 ATOM 15 C GLU 4 7.823 -9.257 -3.531 1.00 0.67 ATOM 16 O GLU 4 8.232 -10.087 -2.722 1.00 0.67 ATOM 17 N VAL 5 7.219 -8.022 -3.278 1.00 0.64 ATOM 18 CA VAL 5 6.906 -7.647 -1.916 1.00 0.64 ATOM 19 C VAL 5 5.646 -6.985 -2.030 1.00 0.64 ATOM 20 O VAL 5 5.403 -6.290 -3.014 1.00 0.64 ATOM 21 N VAL 6 4.745 -7.089 -1.118 1.00 0.15 ATOM 22 CA VAL 6 3.745 -6.124 -1.062 1.00 0.15 ATOM 23 C VAL 6 2.821 -6.125 0.228 1.00 0.15 ATOM 24 O VAL 6 1.636 -6.437 0.137 1.00 0.15 ATOM 25 N PRO 7 3.459 -5.772 1.266 1.00 0.80 ATOM 26 CA PRO 7 2.970 -5.882 2.577 1.00 0.80 ATOM 27 C PRO 7 1.906 -4.803 3.038 1.00 0.80 ATOM 28 O PRO 7 1.499 -4.794 4.197 1.00 0.80 ATOM 29 N ALA 8 1.399 -3.862 2.191 1.00 0.04 ATOM 30 CA ALA 8 0.999 -2.618 2.675 1.00 0.04 ATOM 31 C ALA 8 -0.046 -2.524 3.892 1.00 0.04 ATOM 32 O ALA 8 -1.083 -3.184 3.868 1.00 0.04 ATOM 33 N PRO 9 0.279 -1.669 4.943 1.00 0.46 ATOM 34 CA PRO 9 -0.487 -1.702 6.272 1.00 0.46 ATOM 35 C PRO 9 -1.763 -0.739 6.323 1.00 0.46 ATOM 36 O PRO 9 -2.117 -0.242 7.390 1.00 0.46 ATOM 37 N GLU 10 -2.259 -0.625 5.183 1.00 0.14 ATOM 38 CA GLU 10 -3.578 -0.021 4.717 1.00 0.14 ATOM 39 C GLU 10 -4.913 -0.899 4.750 1.00 0.14 ATOM 40 O GLU 10 -5.984 -0.406 4.403 1.00 0.14 ATOM 41 N HIS 11 -4.858 -2.089 5.138 1.00 0.04 ATOM 42 CA HIS 11 -6.153 -2.550 5.821 1.00 0.04 ATOM 43 C HIS 11 -5.751 -3.871 6.675 1.00 0.04 ATOM 44 O HIS 11 -6.237 -4.962 6.387 1.00 0.04 ATOM 45 N PRO 12 -4.862 -3.888 7.768 1.00 0.54 ATOM 46 CA PRO 12 -5.274 -4.016 9.231 1.00 0.54 ATOM 47 C PRO 12 -5.824 -2.741 9.983 1.00 0.54 ATOM 48 O PRO 12 -5.716 -1.629 9.472 1.00 0.54 ATOM 49 N ALA 13 -6.403 -3.071 11.242 1.00 0.32 ATOM 50 CA ALA 13 -7.434 -2.226 11.925 1.00 0.32 ATOM 51 C ALA 13 -6.944 -1.323 12.929 1.00 0.32 ATOM 52 O ALA 13 -6.538 -1.759 14.005 1.00 0.32 ATOM 53 N ASN 14 -6.932 -0.083 12.714 1.00 0.39 ATOM 54 CA ASN 14 -7.392 0.954 13.739 1.00 0.39 ATOM 55 C ASN 14 -7.972 2.007 12.918 1.00 0.39 ATOM 56 O ASN 14 -9.138 2.354 13.092 1.00 0.39 ATOM 57 N ILE 15 -7.250 2.678 11.888 1.00 0.70 ATOM 58 CA ILE 15 -7.939 3.763 11.381 1.00 0.70 ATOM 59 C ILE 15 -8.863 3.191 10.183 1.00 0.70 ATOM 60 O ILE 15 -8.355 2.882 9.107 1.00 0.70 ATOM 61 N SER 16 -10.064 3.137 10.526 1.00 0.46 ATOM 62 CA SER 16 -11.006 2.314 9.708 1.00 0.46 ATOM 63 C SER 16 -12.246 3.266 9.401 1.00 0.46 ATOM 64 O SER 16 -12.447 3.667 8.257 1.00 0.46 ATOM 65 N ALA 17 -12.904 3.507 10.447 1.00 0.63 ATOM 66 CA ALA 17 -14.032 4.396 10.586 1.00 0.63 ATOM 67 C ALA 17 -13.799 5.544 11.409 1.00 0.63 ATOM 68 O ALA 17 -13.778 5.431 12.633 1.00 0.63 ATOM 69 N PRO 18 -13.606 6.786 10.777 1.00 0.32 ATOM 70 CA PRO 18 -13.944 8.106 11.385 1.00 0.32 ATOM 71 C PRO 18 -15.377 8.370 11.605 1.00 0.32 ATOM 72 O PRO 18 -16.217 7.869 10.861 1.00 0.32 ATOM 73 N ALA 19 -15.833 9.145 12.581 1.00 0.70 ATOM 74 CA ALA 19 -16.397 10.521 12.438 1.00 0.70 ATOM 75 C ALA 19 -16.055 11.481 13.700 1.00 0.70 ATOM 76 O ALA 19 -15.506 12.565 13.519 1.00 0.70 ATOM 77 N THR 20 -16.411 10.963 14.785 1.00 0.09 ATOM 78 CA THR 20 -16.158 11.365 16.122 1.00 0.09 ATOM 79 C THR 20 -14.783 10.824 16.447 1.00 0.09 ATOM 80 O THR 20 -14.337 10.919 17.588 1.00 0.09 ATOM 81 N SER 21 -14.107 10.267 15.468 1.00 0.52 ATOM 82 CA SER 21 -12.732 10.090 15.520 1.00 0.52 ATOM 83 C SER 21 -12.097 11.438 15.971 1.00 0.52 ATOM 84 O SER 21 -11.145 11.441 16.748 1.00 0.52 ATOM 85 N PRO 22 -12.643 12.640 15.474 1.00 0.53 ATOM 86 CA PRO 22 -11.747 13.869 15.644 1.00 0.53 ATOM 87 C PRO 22 -10.916 13.837 16.836 1.00 0.53 ATOM 88 O PRO 22 -9.691 13.873 16.734 1.00 0.53 ATOM 89 N THR 23 -11.392 13.765 17.990 1.00 0.74 ATOM 90 CA THR 23 -10.455 13.394 19.125 1.00 0.74 ATOM 91 C THR 23 -9.771 12.075 19.130 1.00 0.74 ATOM 92 O THR 23 -8.595 11.991 19.478 1.00 0.74 ATOM 93 N GLU 24 -10.539 11.098 18.734 1.00 0.88 ATOM 94 CA GLU 24 -9.933 9.713 18.573 1.00 0.88 ATOM 95 C GLU 24 -8.850 9.833 17.402 1.00 0.88 ATOM 96 O GLU 24 -7.788 9.221 17.480 1.00 0.88 ATOM 97 N HIS 25 -9.036 10.596 16.299 1.00 0.17 ATOM 98 CA HIS 25 -7.905 10.709 15.269 1.00 0.17 ATOM 99 C HIS 25 -6.562 11.264 15.701 1.00 0.17 ATOM 100 O HIS 25 -5.524 10.704 15.360 1.00 0.17 ATOM 101 N GLN 26 -6.704 12.347 16.442 1.00 0.49 ATOM 102 CA GLN 26 -5.582 13.093 16.972 1.00 0.49 ATOM 103 C GLN 26 -4.939 12.132 17.888 1.00 0.49 ATOM 104 O GLN 26 -3.723 11.960 17.845 1.00 0.49 ATOM 105 N GLU 27 -5.690 11.519 18.679 1.00 0.83 ATOM 106 CA GLU 27 -5.063 10.649 19.658 1.00 0.83 ATOM 107 C GLU 27 -4.813 9.173 19.289 1.00 0.83 ATOM 108 O GLU 27 -3.924 8.538 19.852 1.00 0.83 ATOM 109 N ALA 28 -5.529 8.596 18.382 1.00 0.60 ATOM 110 CA ALA 28 -5.319 7.290 17.972 1.00 0.60 ATOM 111 C ALA 28 -3.980 7.257 17.405 1.00 0.60 ATOM 112 O ALA 28 -3.157 6.440 17.815 1.00 0.60 ATOM 113 N ALA 29 -3.804 8.182 16.455 1.00 0.38 ATOM 114 CA ALA 29 -3.054 8.067 15.270 1.00 0.38 ATOM 115 C ALA 29 -2.276 9.486 15.153 1.00 0.38 ATOM 116 O ALA 29 -2.911 10.526 14.991 1.00 0.38 ATOM 117 N ALA 30 -0.975 9.390 15.241 1.00 0.99 ATOM 118 CA ALA 30 0.063 9.702 14.295 1.00 0.99 ATOM 119 C ALA 30 0.269 8.314 13.546 1.00 0.99 ATOM 120 O ALA 30 1.226 8.156 12.791 1.00 0.99 ATOM 121 N LEU 31 -0.661 7.345 13.787 1.00 0.93 ATOM 122 CA LEU 31 -0.522 6.149 13.094 1.00 0.93 ATOM 123 C LEU 31 -0.633 6.451 11.697 1.00 0.93 ATOM 124 O LEU 31 0.096 5.886 10.885 1.00 0.93 ATOM 125 N HIS 32 -1.561 7.364 11.440 1.00 0.44 ATOM 126 CA HIS 32 -1.740 7.610 10.023 1.00 0.44 ATOM 127 C HIS 32 -0.407 8.222 9.416 1.00 0.44 ATOM 128 O HIS 32 -0.005 7.854 8.314 1.00 0.44 ATOM 129 N LYS 33 0.335 9.171 10.104 1.00 0.42 ATOM 130 CA LYS 33 1.610 9.845 9.715 1.00 0.42 ATOM 131 C LYS 33 2.631 8.634 9.559 1.00 0.42 ATOM 132 O LYS 33 3.380 8.581 8.586 1.00 0.42 ATOM 133 N LYS 34 2.515 7.744 10.621 1.00 0.71 ATOM 134 CA LYS 34 3.435 6.643 10.658 1.00 0.71 ATOM 135 C LYS 34 3.277 5.675 9.506 1.00 0.71 ATOM 136 O LYS 34 4.269 5.193 8.965 1.00 0.71 ATOM 137 N HIS 35 2.080 5.466 9.211 1.00 0.23 ATOM 138 CA HIS 35 1.801 4.578 8.065 1.00 0.23 ATOM 139 C HIS 35 2.466 5.223 6.794 1.00 0.23 ATOM 140 O HIS 35 3.104 4.524 6.010 1.00 0.23 ATOM 141 N ALA 36 2.304 6.595 6.614 1.00 0.97 ATOM 142 CA ALA 36 2.838 7.305 5.436 1.00 0.97 ATOM 143 C ALA 36 4.420 7.064 5.469 1.00 0.97 ATOM 144 O ALA 36 5.020 6.769 4.438 1.00 0.97 ATOM 145 N GLU 37 5.086 7.170 6.584 1.00 0.05 ATOM 146 CA GLU 37 6.589 7.030 6.811 1.00 0.05 ATOM 147 C GLU 37 6.887 5.480 6.479 1.00 0.05 ATOM 148 O GLU 37 7.883 5.170 5.828 1.00 0.05 ATOM 149 N HIS 38 6.026 4.615 6.927 1.00 0.59 ATOM 150 CA HIS 38 6.230 3.167 6.588 1.00 0.59 ATOM 151 C HIS 38 6.195 2.988 5.163 1.00 0.59 ATOM 152 O HIS 38 7.038 2.284 4.610 1.00 0.59 ATOM 153 N HIS 39 5.241 3.607 4.485 1.00 0.63 ATOM 154 CA HIS 39 5.137 3.483 3.015 1.00 0.63 ATOM 155 C HIS 39 6.230 3.988 2.241 1.00 0.63 ATOM 156 O HIS 39 6.653 3.348 1.281 1.00 0.63 ATOM 157 N LYS 40 6.738 5.218 2.682 1.00 0.79 ATOM 158 CA LYS 40 7.854 5.803 2.086 1.00 0.79 ATOM 159 C LYS 40 9.045 4.911 2.205 1.00 0.79 ATOM 160 O LYS 40 9.809 4.773 1.253 1.00 0.79 ATOM 161 N GLY 41 9.219 4.296 3.349 1.00 0.63 ATOM 162 CA GLY 41 10.360 3.360 3.547 1.00 0.63 ATOM 163 C GLY 41 10.226 2.193 2.552 1.00 0.63 ATOM 164 O GLY 41 11.213 1.784 1.945 1.00 0.63 ATOM 165 N MET 42 8.956 1.702 2.426 1.00 0.33 ATOM 166 CA MET 42 8.692 0.654 1.492 1.00 0.33 ATOM 167 C MET 42 9.005 1.010 -0.019 1.00 0.33 ATOM 168 O MET 42 9.576 0.194 -0.740 1.00 0.33 ATOM 169 N ALA 43 8.578 2.301 -0.410 1.00 0.70 ATOM 170 CA ALA 43 8.776 2.698 -1.776 1.00 0.70 ATOM 171 C ALA 43 10.271 2.664 -1.932 1.00 0.70 ATOM 172 O ALA 43 10.772 2.220 -2.962 1.00 0.70 ATOM 173 N VAL 44 10.973 3.097 -0.971 1.00 0.28 ATOM 174 CA VAL 44 12.478 3.172 -1.031 1.00 0.28 ATOM 175 C VAL 44 13.161 1.905 -1.198 1.00 0.28 ATOM 176 O VAL 44 14.060 1.795 -2.030 1.00 0.28 ATOM 177 N HIS 45 12.665 0.956 -0.353 1.00 0.97 ATOM 178 CA HIS 45 13.251 -0.462 -0.424 1.00 0.97 ATOM 179 C HIS 45 12.941 -1.130 -1.756 1.00 0.97 ATOM 180 O HIS 45 13.780 -1.850 -2.292 1.00 0.97 ATOM 181 N HIS 46 11.646 -0.825 -2.261 1.00 0.63 ATOM 182 CA HIS 46 11.278 -1.400 -3.624 1.00 0.63 ATOM 183 C HIS 46 12.094 -0.892 -4.688 1.00 0.63 ATOM 184 O HIS 46 12.523 -1.653 -5.552 1.00 0.63 ATOM 185 N GLU 47 12.318 0.436 -4.613 1.00 0.39 ATOM 186 CA GLU 47 13.040 1.066 -5.641 1.00 0.39 ATOM 187 C GLU 47 14.488 0.598 -5.805 1.00 0.39 ATOM 188 O GLU 47 14.963 0.447 -6.929 1.00 0.39 ATOM 189 N SER 48 15.211 0.355 -4.658 1.00 0.77 ATOM 190 CA SER 48 16.521 -0.133 -4.568 1.00 0.77 ATOM 191 C SER 48 16.612 -1.538 -5.206 1.00 0.77 ATOM 192 O SER 48 17.560 -1.825 -5.932 1.00 0.77 ATOM 193 N VAL 49 15.562 -2.297 -4.853 1.00 0.44 ATOM 194 CA VAL 49 15.480 -3.649 -5.482 1.00 0.44 ATOM 195 C VAL 49 15.279 -3.636 -7.032 1.00 0.44 ATOM 196 O VAL 49 15.883 -4.440 -7.739 1.00 0.44 ATOM 197 N ALA 50 14.391 -2.658 -7.490 1.00 0.72 ATOM 198 CA ALA 50 14.235 -2.452 -8.903 1.00 0.72 ATOM 199 C ALA 50 15.517 -2.052 -9.495 1.00 0.72 ATOM 200 O ALA 50 15.885 -2.544 -10.560 1.00 0.72 ATOM 201 N ALA 51 16.288 -1.177 -8.906 1.00 0.78 ATOM 202 CA ALA 51 17.567 -0.693 -9.434 1.00 0.78 ATOM 203 C ALA 51 18.573 -1.914 -9.647 1.00 0.78 ATOM 204 O ALA 51 19.203 -2.018 -10.697 1.00 0.78 ATOM 205 N GLU 52 18.652 -2.799 -8.581 1.00 0.48 ATOM 206 CA GLU 52 19.522 -4.060 -8.591 1.00 0.48 ATOM 207 C GLU 52 18.906 -4.902 -9.799 1.00 0.48 ATOM 208 O GLU 52 19.649 -5.469 -10.597 1.00 0.48 ATOM 209 N TYR 53 17.664 -4.977 -9.932 1.00 0.75 ATOM 210 CA TYR 53 17.013 -5.630 -10.964 1.00 0.75 ATOM 211 C TYR 53 17.255 -5.101 -12.270 1.00 0.75 ATOM 212 O TYR 53 17.358 -5.857 -13.233 1.00 0.75 ATOM 213 N GLY 54 17.358 -3.733 -12.301 1.00 0.60 ATOM 214 CA GLY 54 17.605 -3.113 -13.624 1.00 0.60 ATOM 215 C GLY 54 18.785 -3.796 -14.164 1.00 0.60 ATOM 216 O GLY 54 18.822 -4.116 -15.350 1.00 0.60 ATOM 217 N LYS 55 19.774 -4.015 -13.196 1.00 0.90 ATOM 218 CA LYS 55 20.955 -4.648 -13.532 1.00 0.90 ATOM 219 C LYS 55 20.460 -5.926 -13.974 1.00 0.90 ATOM 220 O LYS 55 19.595 -6.510 -13.326 1.00 0.90 ATOM 221 N ALA 56 21.001 -6.387 -15.072 1.00 0.58 ATOM 222 CA ALA 56 20.349 -7.319 -15.881 1.00 0.58 ATOM 223 C ALA 56 20.506 -8.828 -15.521 1.00 0.58 ATOM 224 O ALA 56 21.337 -9.180 -14.688 1.00 0.58 ATOM 225 N GLY 57 19.692 -9.557 -16.196 1.00 0.49 ATOM 226 CA GLY 57 19.017 -10.835 -15.793 1.00 0.49 ATOM 227 C GLY 57 17.560 -10.880 -15.281 1.00 0.49 ATOM 228 O GLY 57 16.958 -11.951 -15.228 1.00 0.49 ATOM 229 N HIS 58 16.893 -9.778 -14.882 1.00 0.65 ATOM 230 CA HIS 58 15.431 -9.716 -14.496 1.00 0.65 ATOM 231 C HIS 58 14.602 -8.611 -14.934 1.00 0.65 ATOM 232 O HIS 58 14.093 -7.858 -14.108 1.00 0.65 ATOM 233 N PRO 59 14.448 -8.500 -16.205 1.00 0.32 ATOM 234 CA PRO 59 13.568 -7.343 -16.645 1.00 0.32 ATOM 235 C PRO 59 12.077 -7.242 -16.103 1.00 0.32 ATOM 236 O PRO 59 11.607 -6.149 -15.794 1.00 0.32 ATOM 237 N GLU 60 11.243 -8.348 -15.943 1.00 0.15 ATOM 238 CA GLU 60 9.901 -8.376 -15.503 1.00 0.15 ATOM 239 C GLU 60 9.958 -7.978 -14.086 1.00 0.15 ATOM 240 O GLU 60 9.060 -7.292 -13.601 1.00 0.15 ATOM 241 N LEU 61 10.965 -8.347 -13.349 1.00 0.68 ATOM 242 CA LEU 61 11.096 -7.979 -11.969 1.00 0.68 ATOM 243 C LEU 61 11.249 -6.462 -11.756 1.00 0.68 ATOM 244 O LEU 61 10.655 -5.907 -10.834 1.00 0.68 ATOM 245 N LYS 62 12.020 -5.922 -12.626 1.00 0.81 ATOM 246 CA LYS 62 12.009 -4.444 -12.628 1.00 0.81 ATOM 247 C LYS 62 10.772 -3.739 -12.895 1.00 0.81 ATOM 248 O LYS 62 10.460 -2.763 -12.216 1.00 0.81 ATOM 249 N LYS 63 10.046 -4.167 -13.826 1.00 0.07 ATOM 250 CA LYS 63 8.765 -3.443 -14.123 1.00 0.07 ATOM 251 C LYS 63 7.791 -3.498 -12.917 1.00 0.07 ATOM 252 O LYS 63 7.172 -2.491 -12.579 1.00 0.07 ATOM 253 N HIS 64 7.703 -4.761 -12.280 1.00 0.08 ATOM 254 CA HIS 64 6.809 -5.087 -11.111 1.00 0.08 ATOM 255 C HIS 64 7.370 -4.171 -9.902 1.00 0.08 ATOM 256 O HIS 64 6.587 -3.579 -9.164 1.00 0.08 ATOM 257 N HIS 65 8.626 -4.124 -9.806 1.00 0.42 ATOM 258 CA HIS 65 9.091 -3.314 -8.603 1.00 0.42 ATOM 259 C HIS 65 8.738 -1.956 -8.869 1.00 0.42 ATOM 260 O HIS 65 8.225 -1.270 -7.988 1.00 0.42 ATOM 261 N GLU 66 8.927 -1.425 -9.990 1.00 0.52 ATOM 262 CA GLU 66 8.555 -0.019 -10.238 1.00 0.52 ATOM 263 C GLU 66 6.988 0.232 -10.080 1.00 0.52 ATOM 264 O GLU 66 6.580 1.228 -9.486 1.00 0.52 ATOM 265 N ALA 67 6.220 -0.644 -10.587 1.00 0.12 ATOM 266 CA ALA 67 4.807 -0.509 -10.469 1.00 0.12 ATOM 267 C ALA 67 4.498 -0.513 -8.899 1.00 0.12 ATOM 268 O ALA 67 3.692 0.286 -8.427 1.00 0.12 ATOM 269 N MET 68 5.130 -1.379 -8.153 1.00 0.59 ATOM 270 CA MET 68 4.889 -1.410 -6.648 1.00 0.59 ATOM 271 C MET 68 5.283 -0.107 -6.008 1.00 0.59 ATOM 272 O MET 68 4.571 0.392 -5.139 1.00 0.59 ATOM 273 N ALA 69 6.443 0.403 -6.496 1.00 0.51 ATOM 274 CA ALA 69 6.913 1.581 -5.908 1.00 0.51 ATOM 275 C ALA 69 5.918 2.672 -6.148 1.00 0.51 ATOM 276 O ALA 69 5.699 3.509 -5.275 1.00 0.51 ATOM 277 N LYS 70 5.266 2.698 -7.357 1.00 0.19 ATOM 278 CA LYS 70 4.264 3.616 -7.596 1.00 0.19 ATOM 279 C LYS 70 2.988 3.476 -6.692 1.00 0.19 ATOM 280 O LYS 70 2.422 4.481 -6.265 1.00 0.19 ATOM 281 N HIS 71 2.598 2.157 -6.436 1.00 0.14 ATOM 282 CA HIS 71 1.543 2.023 -5.533 1.00 0.14 ATOM 283 C HIS 71 1.839 2.526 -4.230 1.00 0.14 ATOM 284 O HIS 71 0.981 3.134 -3.595 1.00 0.14 ATOM 285 N HIS 72 3.129 2.278 -3.784 1.00 0.51 ATOM 286 CA HIS 72 3.506 2.726 -2.466 1.00 0.51 ATOM 287 C HIS 72 3.424 4.316 -2.343 1.00 0.51 ATOM 288 O HIS 72 2.948 4.832 -1.335 1.00 0.51 ATOM 289 N GLU 73 3.863 5.063 -3.326 1.00 0.94 ATOM 290 CA GLU 73 3.693 6.474 -3.328 1.00 0.94 ATOM 291 C GLU 73 2.270 6.882 -3.250 1.00 0.94 ATOM 292 O GLU 73 1.934 7.805 -2.511 1.00 0.94 ATOM 293 N ALA 74 1.495 6.183 -4.001 1.00 0.85 ATOM 294 CA ALA 74 0.123 6.503 -3.992 1.00 0.85 ATOM 295 C ALA 74 -0.545 6.312 -2.605 1.00 0.85 ATOM 296 O ALA 74 -1.245 7.203 -2.130 1.00 0.85 ATOM 297 N LEU 75 -0.289 5.116 -1.976 1.00 0.68 ATOM 298 CA LEU 75 -0.904 4.746 -0.713 1.00 0.68 ATOM 299 C LEU 75 -0.389 5.907 0.282 1.00 0.68 ATOM 300 O LEU 75 -1.149 6.380 1.123 1.00 0.68 ATOM 301 N ALA 76 0.950 6.254 0.036 1.00 0.18 ATOM 302 CA ALA 76 1.546 7.213 0.978 1.00 0.18 ATOM 303 C ALA 76 0.986 8.537 1.002 1.00 0.18 ATOM 304 O ALA 76 0.748 9.087 2.075 1.00 0.18 ATOM 305 N LYS 77 0.769 9.049 -0.202 1.00 0.38 ATOM 306 CA LYS 77 0.169 10.416 -0.465 1.00 0.38 ATOM 307 C LYS 77 -1.226 10.357 0.217 1.00 0.38 ATOM 308 O LYS 77 -1.626 11.310 0.882 1.00 0.38 ATOM 309 N GLU 78 -1.935 9.277 0.064 1.00 0.75 ATOM 310 CA GLU 78 -3.258 9.082 0.704 1.00 0.75 ATOM 311 C GLU 78 -3.297 9.035 2.232 1.00 0.75 ATOM 312 O GLU 78 -4.168 9.648 2.845 1.00 0.75 ATOM 313 N HIS 79 -2.380 8.342 2.716 1.00 0.68 ATOM 314 CA HIS 79 -2.256 8.284 4.208 1.00 0.68 ATOM 315 C HIS 79 -1.975 9.729 4.691 1.00 0.68 ATOM 316 O HIS 79 -2.545 10.167 5.689 1.00 0.68 ATOM 317 N GLU 80 -1.082 10.569 4.008 1.00 0.88 ATOM 318 CA GLU 80 -0.722 11.952 4.385 1.00 0.88 ATOM 319 C GLU 80 -1.858 12.896 4.229 1.00 0.88 ATOM 320 O GLU 80 -2.049 13.775 5.066 1.00 0.88 ATOM 321 N LYS 81 -2.633 12.729 3.166 1.00 0.97 ATOM 322 CA LYS 81 -3.837 13.514 3.014 1.00 0.97 ATOM 323 C LYS 81 -4.851 13.282 4.090 1.00 0.97 ATOM 324 O LYS 81 -5.511 14.223 4.528 1.00 0.97 ATOM 325 N ALA 82 -5.030 11.975 4.593 1.00 0.52 ATOM 326 CA ALA 82 -5.789 11.623 5.722 1.00 0.52 ATOM 327 C ALA 82 -5.387 12.129 7.001 1.00 0.52 ATOM 328 O ALA 82 -6.226 12.588 7.774 1.00 0.52 ATOM 329 N ALA 83 -4.118 12.075 7.278 1.00 0.90 ATOM 330 CA ALA 83 -3.529 12.622 8.524 1.00 0.90 ATOM 331 C ALA 83 -3.767 14.106 8.570 1.00 0.90 ATOM 332 O ALA 83 -4.119 14.642 9.619 1.00 0.90 ATOM 333 N GLU 84 -3.593 14.880 7.417 1.00 0.53 ATOM 334 CA GLU 84 -3.815 16.326 7.395 1.00 0.53 ATOM 335 C GLU 84 -5.304 16.657 7.695 1.00 0.53 ATOM 336 O GLU 84 -5.588 17.568 8.470 1.00 0.53 ATOM 337 N ASN 85 -6.239 15.968 7.135 1.00 0.62 ATOM 338 CA ASN 85 -7.625 16.126 7.345 1.00 0.62 ATOM 339 C ASN 85 -8.038 15.861 8.846 1.00 0.62 ATOM 340 O ASN 85 -8.797 16.637 9.423 1.00 0.62 ATOM 341 N HIS 86 -7.506 14.724 9.484 1.00 0.74 ATOM 342 CA HIS 86 -7.788 14.352 10.825 1.00 0.74 ATOM 343 C HIS 86 -7.260 15.448 11.785 1.00 0.74 ATOM 344 O HIS 86 -7.914 15.764 12.777 1.00 0.74 ATOM 345 N GLU 87 -6.109 15.977 11.445 1.00 0.64 ATOM 346 CA GLU 87 -5.544 17.152 12.195 1.00 0.64 ATOM 347 C GLU 87 -6.351 18.380 12.118 1.00 0.64 ATOM 348 O GLU 87 -6.544 19.054 13.126 1.00 0.64 ATOM 349 N LYS 88 -6.876 18.721 10.880 1.00 0.60 ATOM 350 CA LYS 88 -7.720 19.935 10.781 1.00 0.60 ATOM 351 C LYS 88 -9.028 19.713 11.640 1.00 0.60 ATOM 352 O LYS 88 -9.485 20.634 12.315 1.00 0.60 ATOM 353 N MET 89 -9.566 18.469 11.571 1.00 0.31 ATOM 354 CA MET 89 -10.843 18.198 12.289 1.00 0.31 ATOM 355 C MET 89 -10.754 18.393 13.714 1.00 0.31 ATOM 356 O MET 89 -11.627 19.024 14.305 1.00 0.31 ATOM 357 N ALA 90 -9.656 17.837 14.296 1.00 0.28 ATOM 358 CA ALA 90 -9.440 17.767 15.662 1.00 0.28 ATOM 359 C ALA 90 -9.118 19.214 16.327 1.00 0.28 ATOM 360 O ALA 90 -9.478 19.456 17.477 1.00 0.28 ATOM 361 N LYS 91 -8.426 20.072 15.441 1.00 0.44 ATOM 362 CA LYS 91 -8.264 21.515 15.884 1.00 0.44 ATOM 363 C LYS 91 -9.659 22.264 16.081 1.00 0.44 ATOM 364 O LYS 91 -9.893 22.870 17.125 1.00 0.44 ATOM 365 N PRO 92 -10.507 22.204 15.129 1.00 0.83 ATOM 366 CA PRO 92 -11.740 23.101 15.025 1.00 0.83 ATOM 367 C PRO 92 -12.753 23.175 16.246 1.00 0.83 ATOM 368 O PRO 92 -13.290 24.241 16.539 1.00 0.83 ATOM 369 N LYS 93 -13.047 22.185 16.962 1.00 0.35 ATOM 370 CA LYS 93 -14.038 22.358 18.123 1.00 0.35 ATOM 371 C LYS 93 -13.445 23.368 19.093 1.00 0.35 ATOM 372 O LYS 93 -12.337 23.876 18.846 1.00 0.35 TER END