
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  101 (  101),  selected  101 , name T0304TS393_5-D1
# Molecule2: number of CA atoms  101 (  799),  selected  101 , name T0304_D1.pdb
# PARAMETERS: T0304TS393_5-D1.T0304_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    43        44 - 86          4.99    18.08
  LCS_AVERAGE:     30.61

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    23        56 - 78          1.99    15.55
  LONGEST_CONTINUOUS_SEGMENT:    23        57 - 79          1.90    15.70
  LONGEST_CONTINUOUS_SEGMENT:    23        58 - 80          1.84    15.77
  LCS_AVERAGE:     11.52

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    17        63 - 79          0.85    15.47
  LCS_AVERAGE:      7.08

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  101
LCS_GDT     R      17     R      17      4    6   14     3    3    4    4    6    6    8   11   11   11   17   21   25   28   31   34   35   37   41   43 
LCS_GDT     P      18     P      18      4    6   14     3    3    4    4    6    6    8   11   11   12   14   24   26   30   31   35   37   40   41   44 
LCS_GDT     W      19     W      19      4    6   14     3    3    4    4    6    6    8   11   11   12   14   15   19   19   22   34   37   40   41   44 
LCS_GDT     W      20     W      20      4    6   14     3    3    4    4    7    8    8   11   12   12   14   16   19   19   22   23   29   40   41   44 
LCS_GDT     G      21     G      21      3    6   14     3    3    4    5    7    8    8   11   12   12   14   15   19   20   22   24   35   40   42   45 
LCS_GDT     L      22     L      22      3    6   14     3    3    4    5    7    8    8   11   12   12   14   16   19   20   22   36   41   44   45   47 
LCS_GDT     P      23     P      23      4    6   14     3    3    4    5    7    8    9   11   14   18   20   24   27   30   35   36   41   44   45   47 
LCS_GDT     C      24     C      24      4    6   14     3    4    6    7    7    8   11   14   15   18   21   24   27   32   35   36   41   44   45   47 
LCS_GDT     T      25     T      25      4    6   14     3    4    6    7    8   10   11   13   17   18   22   25   27   29   32   36   37   39   42   46 
LCS_GDT     V      26     V      26      4    6   14     3    4    6    7    7    8    9   13   17   17   22   25   27   29   31   33   36   38   39   44 
LCS_GDT     T      27     T      27      4    6   14     3    4    6    7    7    8    9   11   12   12   14   16   19   21   23   24   27   38   41   42 
LCS_GDT     P      28     P      28      4    6   14     0    3    5    5    5    8    9   10   12   13   14   17   19   21   24   29   37   42   44   46 
LCS_GDT     C      29     C      29      4    6   14     3    3    6    7    7   10   11   15   20   23   28   30   31   33   35   37   41   44   45   47 
LCS_GDT     F      30     F      30      4    6   14     3    3    6    7    7    8   12   17   20   23   28   30   31   33   36   37   42   44   47   49 
LCS_GDT     G      31     G      31      4    6   13     3    3    5    5    5    6    9   16   18   23   25   29   33   38   40   41   43   45   47   49 
LCS_GDT     A      32     A      32      3    6   12     3    3    3    6    8    8    9    9   10   12   16   27   36   40   42   43   44   45   48   50 
LCS_GDT     R      33     R      33      3    3   12     3    3    3    6    8    8   17   27   30   31   33   36   37   40   42   43   44   47   49   53 
LCS_GDT     L      34     L      34      3    3   12     3    4    4    4    8   10   20   25   29   31   33   36   37   40   42   43   46   51   54   58 
LCS_GDT     V      35     V      35      3    3   12     3    4    4    4    4    4    7    9   11   14   18   22   31   33   38   41   46   51   54   58 
LCS_GDT     Q      36     Q      36      3    4   15     3    4    4    4    5    8    9   11   17   19   21   23   26   32   36   42   48   51   54   58 
LCS_GDT     E      37     E      37      3    5   15     3    4    4    4    6    8    9   10   13   17   20   23   26   32   39   42   48   51   54   58 
LCS_GDT     G      38     G      38      3    5   15     3    3    4    5    6    8    9    9   11   15   18   19   24   27   31   34   36   41   43   45 
LCS_GDT     N      39     N      39      3    5   15     3    4    4    5    6    8    9   11   14   17   18   20   23   26   31   33   41   41   43   46 
LCS_GDT     R      40     R      40      3    5   15     3    4    4    4    5    5    5    8   10   17   18   20   24   27   34   35   41   44   49   51 
LCS_GDT     L      41     L      41      3    5   15     0    4    4    5    5    7    8   12   17   18   22   25   28   36   39   42   48   51   54   58 
LCS_GDT     H      42     H      42      3    3   39     0    3    4    5    6    7   11   15   17   19   21   23   27   32   35   42   46   50   54   58 
LCS_GDT     Y      43     Y      43      3    7   40     1    3    3    3    5    7   10   15   17   20   24   31   37   40   43   45   48   51   54   58 
LCS_GDT     L      44     L      44      5    7   43     4    4    6    6    6    7    8   15   23   27   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     A      45     A      45      5    7   43     4    4    6    6    6    7   11   15   17   19   22   36   37   40   43   45   48   51   54   58 
LCS_GDT     D      46     D      46      5    7   43     4    4    6    6    6    7   10   15   16   19   21   31   37   40   43   45   48   51   54   58 
LCS_GDT     R      47     R      47      5    7   43     4    4    6    6    6    7   11   15   20   26   30   35   37   40   43   45   48   51   54   58 
LCS_GDT     A      48     A      48      5    8   43     3    5    6    8   11   15   19   25   28   30   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     G      49     G      49      5    8   43     3    5    6    6    8   15   19   25   28   30   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     I      50     I      50      4    8   43     4    5    6    6   10   21   24   26   28   30   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     R      51     R      51      4    8   43     4    4    6    6    8    8   12   13   16   20   27   28   37   40   43   45   48   51   54   58 
LCS_GDT     G      52     G      52      4    8   43     4    4    6    6    8    8   11   19   23   25   32   36   37   40   43   45   48   51   54   58 
LCS_GDT     L      53     L      53      4   18   43     4    4    8   13   18   23   27   28   29   30   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     F      54     F      54     13   22   43     3   11   13   16   20   24   27   28   30   31   33   36   37   40   42   45   48   51   54   58 
LCS_GDT     S      55     S      55     13   22   43     3    3    5    9   14   18   24   27   30   31   33   36   37   40   42   43   44   46   51   56 
LCS_GDT     D      56     D      56     13   23   43     9   11   13   16   19   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     A      57     A      57     13   23   43     9   11   13   16   19   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     D      58     D      58     13   23   43     9   11   13   16   20   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     A      59     A      59     13   23   43     9   11   14   17   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     Y      60     Y      60     13   23   43     9   11   14   17   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     H      61     H      61     13   23   43     9   11   14   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     L      62     L      62     13   23   43     9   11   14   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     D      63     D      63     17   23   43     9   11   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     Q      64     Q      64     17   23   43     9   11   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     A      65     A      65     17   23   43    15   15   16   19   21   23   25   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     F      66     F      66     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     P      67     P      67     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     L      68     L      68     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     L      69     L      69     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     M      70     M      70     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     K      71     K      71     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     Q      72     Q      72     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     L      73     L      73     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     E      74     E      74     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     L      75     L      75     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     M      76     M      76     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     L      77     L      77     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     T      78     T      78     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     S      79     S      79     17   23   43    15   15   16   19   21   24   27   28   30   31   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     G      80     G      80     16   23   43     3    3    4   18   20   23   27   28   30   31   33   36   37   40   43   45   47   51   54   56 
LCS_GDT     E      81     E      81      4   22   43     3    3    5    6    9   11   18   21   26   30   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     L      82     L      82      4   21   43     3    3    4    6    9   14   18   19   22   30   33   34   37   40   42   45   47   50   54   57 
LCS_GDT     N      83     N      83      4    9   43     3    3    4    6    7   11   15   18   22   25   28   33   36   39   42   43   46   48   50   55 
LCS_GDT     P      84     P      84      4    9   43     1    3    5    6   10   11   13   15   19   25   27   30   34   36   40   42   44   47   49   52 
LCS_GDT     R      85     R      85      4    9   43     1    4    7    8   16   22   25   28   29   30   33   36   37   40   43   45   47   49   52   55 
LCS_GDT     H      86     H      86      4    9   43     1    4    6   13   19   23   27   28   29   30   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     Q      87     Q      87      4    9   41     3    4    5    8   10   11   23   27   29   30   33   36   37   40   43   45   47   51   54   58 
LCS_GDT     H      88     H      88      4    9   41     3    4    5   12   20   20   24   27   30   31   33   36   37   40   42   43   46   50   54   58 
LCS_GDT     T      89     T      89      4    9   40     3    4    5    7   10   12   15   20   26   30   33   36   37   40   42   43   44   49   54   58 
LCS_GDT     V      90     V      90      4    9   38     3    4    5    7   10   11   12   15   17   21   24   27   31   34   36   39   43   48   50   58 
LCS_GDT     T      91     T      91      4    9   30     3    4    5    7   10   11   12   15   17   19   24   25   28   30   33   36   41   44   47   49 
LCS_GDT     L      92     L      92      5    9   30     3    5    6    8   10   11   12   17   20   23   28   30   31   33   35   38   42   48   52   57 
LCS_GDT     Y      93     Y      93      5    9   30     3    5    7    8   10   11   12   17   20   23   28   30   31   33   35   37   41   44   47   52 
LCS_GDT     A      94     A      94      5    9   30     4    4    7    8   10   11   12   17   20   23   28   30   31   33   35   37   41   44   45   48 
LCS_GDT     K      95     K      95      5    9   30     4    5    7    8   10   11   12   17   20   23   28   30   31   33   35   37   41   44   45   48 
LCS_GDT     G      96     G      96      5    9   30     4    5    7    8   10   11   12   17   20   23   28   30   31   33   35   37   41   44   45   47 
LCS_GDT     L      97     L      97      5    9   30     4    4    7    8   10   11   12   17   20   23   28   30   31   34   36   39   42   44   47   49 
LCS_GDT     T      98     T      98      4    9   30     4    5    7    8   10   11   12   17   20   23   28   30   31   34   37   39   42   45   47   49 
LCS_GDT     C      99     C      99      4    9   30     4    5    5    7    9   11   15   18   27   30   33   36   37   40   42   43   44   49   54   58 
LCS_GDT     K     100     K     100      4    9   30     3    4    5    7    8   11   24   27   30   31   33   36   37   40   42   43   44   49   54   58 
LCS_GDT     A     101     A     101      4    9   30     3    4    5    6    7   10   12   14   17   19   25   35   37   40   42   43   44   49   54   58 
LCS_GDT     D     102     D     102      4    6   28     3    4    4    6    7    8   11   13   17   19   22   25   27   29   40   42   44   48   54   58 
LCS_GDT     T     103     T     103      3    6   22     3    3    4    6    8    8   11   13   17   19   22   25   27   29   32   38   42   49   54   58 
LCS_GDT     L     104     L     104      3    6   22     3    3    4    6    8    8   11   13   17   19   25   26   28   29   32   36   42   48   54   58 
LCS_GDT     S     105     S     105      3    5   22     3    3    3    6    8   10   11   15   17   18   25   26   28   32   34   42   48   51   54   58 
LCS_GDT     S     106     S     106      4    6   22     3    4    4    6    8   10   11   14   21   25   28   31   36   40   43   45   48   51   54   58 
LCS_GDT     C     107     C     107      5    6   22     4    5    5    6    8    8    9   11   14   18   22   23   25   32   36   42   48   51   54   58 
LCS_GDT     D     108     D     108      5    6   22     4    5    5    6    8   10   11   13   17   18   22   31   37   40   42   45   48   51   54   57 
LCS_GDT     Y     109     Y     109      5    8   22     4    5    5    6    8   10   11   14   22   27   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     V     110     V     110      5    8   22     4    5    5    6    8   10   11   13   21   27   33   36   37   40   43   45   48   51   54   58 
LCS_GDT     Y     111     Y     111      5    8   22     4    5    6    6    7   10   11   12   15   30   33   35   37   40   43   45   48   51   54   58 
LCS_GDT     L     112     L     112      5    8   22     3    4    5    6   14   20   24   27   30   31   33   36   37   40   42   43   44   49   54   58 
LCS_GDT     A     113     A     113      5    8   22     3    4    5    6    8   11   14   17   22   24   28   34   37   40   42   43   44   45   48   50 
LCS_GDT     V     114     V     114      5    8   22     3    4    5    7    8   10   12   17   20   23   28   30   31   34   36   39   42   44   47   49 
LCS_GDT     Y     115     Y     115      5    8   22     3    4    5    6    8   10   11   13   16   19   24   26   30   33   35   37   41   44   45   47 
LCS_GDT     P     116     P     116      5    8   22     3    4    5    6    8   10   12   15   16   18   22   25   27   29   31   36   37   39   41   44 
LCS_GDT     T     117     T     117      3    7   22     0    3    3    5    8   10   11   15   17   18   22   25   27   29   31   34   36   38   39   41 
LCS_AVERAGE  LCS_A:  16.40  (   7.08   11.52   30.61 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     15     15     16     19     21     24     27     28     30     31     33     36     37     40     43     45     48     51     54     58 
GDT PERCENT_CA  14.85  14.85  15.84  18.81  20.79  23.76  26.73  27.72  29.70  30.69  32.67  35.64  36.63  39.60  42.57  44.55  47.52  50.50  53.47  57.43
GDT RMS_LOCAL    0.21   0.21   0.67   1.20   1.52   1.95   2.20   2.29   2.67   2.76   3.17   3.84   3.57   3.98   5.04   5.15   6.01   6.22   6.42   7.15
GDT RMS_ALL_CA  15.66  15.66  15.44  15.61  15.42  15.66  16.37  16.35  15.09  15.11  15.02  18.37  15.01  14.95  17.96  17.86  17.93  17.56  17.67  16.89

#      Molecule1      Molecule2       DISTANCE
LGA    R      17      R      17         38.329
LGA    P      18      P      18         36.456
LGA    W      19      W      19         34.767
LGA    W      20      W      20         31.010
LGA    G      21      G      21         30.903
LGA    L      22      L      22         29.321
LGA    P      23      P      23         31.568
LGA    C      24      C      24         30.635
LGA    T      25      T      25         33.312
LGA    V      26      V      26         30.287
LGA    T      27      T      27         30.198
LGA    P      28      P      28         29.702
LGA    C      29      C      29         23.412
LGA    F      30      F      30         21.022
LGA    G      31      G      31         18.665
LGA    A      32      A      32         14.531
LGA    R      33      R      33         10.671
LGA    L      34      L      34          8.458
LGA    V      35      V      35         12.160
LGA    Q      36      Q      36         14.816
LGA    E      37      E      37         14.630
LGA    G      38      G      38         19.992
LGA    N      39      N      39         22.345
LGA    R      40      R      40         18.715
LGA    L      41      L      41         13.941
LGA    H      42      H      42         15.200
LGA    Y      43      Y      43         13.509
LGA    L      44      L      44         12.833
LGA    A      45      A      45         12.379
LGA    D      46      D      46         14.536
LGA    R      47      R      47         14.253
LGA    A      48      A      48         11.141
LGA    G      49      G      49         11.509
LGA    I      50      I      50          8.215
LGA    R      51      R      51         10.332
LGA    G      52      G      52          9.023
LGA    L      53      L      53          3.404
LGA    F      54      F      54          3.088
LGA    S      55      S      55          6.466
LGA    D      56      D      56          3.512
LGA    A      57      A      57          2.613
LGA    D      58      D      58          2.195
LGA    A      59      A      59          1.361
LGA    Y      60      Y      60          1.111
LGA    H      61      H      61          0.972
LGA    L      62      L      62          1.339
LGA    D      63      D      63          1.356
LGA    Q      64      Q      64          3.082
LGA    A      65      A      65          3.895
LGA    F      66      F      66          2.653
LGA    P      67      P      67          2.636
LGA    L      68      L      68          3.186
LGA    L      69      L      69          2.379
LGA    M      70      M      70          0.756
LGA    K      71      K      71          1.530
LGA    Q      72      Q      72          1.564
LGA    L      73      L      73          1.294
LGA    E      74      E      74          1.238
LGA    L      75      L      75          0.275
LGA    M      76      M      76          1.453
LGA    L      77      L      77          2.295
LGA    T      78      T      78          2.047
LGA    S      79      S      79          1.692
LGA    G      80      G      80          3.132
LGA    E      81      E      81          7.637
LGA    L      82      L      82          7.073
LGA    N      83      N      83          7.731
LGA    P      84      P      84          8.238
LGA    R      85      R      85          5.253
LGA    H      86      H      86          2.582
LGA    Q      87      Q      87          7.094
LGA    H      88      H      88         10.749
LGA    T      89      T      89         14.050
LGA    V      90      V      90         16.065
LGA    T      91      T      91         19.022
LGA    L      92      L      92         15.530
LGA    Y      93      Y      93         17.443
LGA    A      94      A      94         18.353
LGA    K      95      K      95         22.574
LGA    G      96      G      96         21.834
LGA    L      97      L      97         16.742
LGA    T      98      T      98         16.096
LGA    C      99      C      99         11.083
LGA    K     100      K     100         11.678
LGA    A     101      A     101         12.231
LGA    D     102      D     102         14.214
LGA    T     103      T     103         14.968
LGA    L     104      L     104         14.964
LGA    S     105      S     105         13.731
LGA    S     106      S     106          8.966
LGA    C     107      C     107         14.736
LGA    D     108      D     108         13.269
LGA    Y     109      Y     109          8.727
LGA    V     110      V     110          7.003
LGA    Y     111      Y     111          5.893
LGA    L     112      L     112          8.240
LGA    A     113      A     113         14.007
LGA    V     114      V     114         18.381
LGA    Y     115      Y     115         24.726
LGA    P     116      P     116         29.665
LGA    T     117      T     117         35.077

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  101  101    4.0     28    2.29    26.485    22.868     1.172

LGA_LOCAL      RMSD =  2.290  Number of atoms =   28  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 16.352  Number of atoms =  101 
Std_ALL_ATOMS  RMSD = 14.773  (standard rmsd on all 101 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.712031 * X  +  -0.700117 * Y  +   0.053370 * Z  +  49.427101
  Y_new =   0.307672 * X  +  -0.242775 * Y  +   0.919999 * Z  +  19.828321
  Z_new =  -0.631149 * X  +   0.671489 * Y  +   0.388270 * Z  +  49.738312 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   1.046544   -2.095049  [ DEG:    59.9625   -120.0375 ]
  Theta =   0.683034    2.458559  [ DEG:    39.1350    140.8650 ]
  Phi   =   2.733720   -0.407873  [ DEG:   156.6306    -23.3694 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0304TS393_5-D1                               
REMARK     2: T0304_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0304TS393_5-D1.T0304_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  101  101   4.0   28   2.29  22.868    14.77
REMARK  ---------------------------------------------------------- 
MOLECULE T0304TS393_5-D1
PFRMAT TS
TARGET T0304
MODEL 5
PARENT N/A
ATOM     17  CA  ARG    17      48.540  17.119  79.397  1.00 25.00           C
ATOM     18  CA  PRO    18      51.465  18.595  77.382  1.00 25.00           C
ATOM     19  CA  TRP    19      52.427  16.590  74.263  1.00 25.00           C
ATOM     20  CA  TRP    20      55.345  16.667  71.756  1.00 25.00           C
ATOM     21  CA  GLY    21      56.733  19.364  69.508  1.00 25.00           C
ATOM     22  CA  LEU    22      56.683  18.995  65.667  1.00 25.00           C
ATOM     23  CA  PRO    23      58.825  20.779  63.032  1.00 25.00           C
ATOM     24  CA  CYS    24      57.427  21.267  59.589  1.00 25.00           C
ATOM     25  CA  THR    25      54.690  23.344  61.317  1.00 25.00           C
ATOM     26  CA  VAL    26      53.314  23.975  57.829  1.00 25.00           C
ATOM     27  CA  THR    27      50.605  21.306  57.947  1.00 25.00           C
ATOM     28  CA  PRO    28      53.280  18.879  56.954  1.00 25.00           C
ATOM     29  CA  CYS    29      50.497  17.331  54.908  1.00 25.00           C
ATOM     30  CA  PHE    30      51.760  13.747  54.428  1.00 25.00           C
ATOM     31  CA  GLY    31      52.049  11.502  51.337  1.00 25.00           C
ATOM     32  CA  ALA    32      48.327  10.639  51.585  1.00 25.00           C
ATOM     33  CA  ARG    33      47.457  14.359  51.849  1.00 25.00           C
ATOM     34  CA  LEU    34      49.608  15.107  48.771  1.00 25.00           C
ATOM     35  CA  VAL    35      47.858  12.304  46.836  1.00 25.00           C
ATOM     36  CA  GLN    36      44.440  13.707  47.847  1.00 25.00           C
ATOM     37  CA  GLU    37      45.504  17.200  46.692  1.00 25.00           C
ATOM     38  CA  GLY    38      46.679  15.761  43.343  1.00 25.00           C
ATOM     39  CA  ASN    39      43.334  13.945  42.921  1.00 25.00           C
ATOM     40  CA  ARG    40      41.447  17.191  43.679  1.00 25.00           C
ATOM     41  CA  LEU    41      43.575  19.057  41.097  1.00 25.00           C
ATOM     42  CA  HIS    42      42.849  16.340  38.498  1.00 25.00           C
ATOM     43  CA  TYR    43      39.101  16.594  39.242  1.00 25.00           C
ATOM     44  CA  LEU    44      39.255  20.400  38.843  1.00 25.00           C
ATOM     45  CA  ALA    45      41.076  20.000  35.499  1.00 25.00           C
ATOM     46  CA  ASP    46      38.416  17.510  34.320  1.00 25.00           C
ATOM     47  CA  ARG    47      35.645  19.951  35.336  1.00 25.00           C
ATOM     48  CA  ALA    48      36.329  23.618  36.167  1.00 25.00           C
ATOM     49  CA  GLY    49      37.180  24.393  32.481  1.00 25.00           C
ATOM     50  CA  ILE    50      40.988  24.213  32.548  1.00 25.00           C
ATOM     51  CA  ARG    51      43.742  22.690  30.408  1.00 25.00           C
ATOM     52  CA  GLY    52      42.237  20.493  27.721  1.00 25.00           C
ATOM     53  CA  LEU    53      39.489  17.866  28.082  1.00 25.00           C
ATOM     54  CA  PHE    54      41.522  14.885  29.239  1.00 25.00           C
ATOM     55  CA  SER    55      43.565  11.657  29.156  1.00 25.00           C
ATOM     56  CA  ASP    56      46.828  11.844  27.118  1.00 25.00           C
ATOM     57  CA  ALA    57      48.618  14.934  25.734  1.00 25.00           C
ATOM     58  CA  ASP    58      46.052  17.213  27.435  1.00 25.00           C
ATOM     59  CA  ALA    59      46.559  15.353  30.745  1.00 25.00           C
ATOM     60  CA  TYR    60      50.354  15.743  30.411  1.00 25.00           C
ATOM     61  CA  HIS    61      49.935  19.489  29.734  1.00 25.00           C
ATOM     62  CA  LEU    62      47.691  19.820  32.820  1.00 25.00           C
ATOM     63  CA  ASP    63      50.295  17.981  34.941  1.00 25.00           C
ATOM     64  CA  GLN    64      53.040  20.310  33.636  1.00 25.00           C
ATOM     65  CA  ALA    65      50.888  23.363  34.484  1.00 25.00           C
ATOM     66  CA  PHE    66      50.295  21.995  38.012  1.00 25.00           C
ATOM     67  CA  PRO    67      54.059  21.440  38.454  1.00 25.00           C
ATOM     68  CA  LEU    68      54.749  25.023  37.289  1.00 25.00           C
ATOM     69  CA  LEU    69      52.152  26.355  39.768  1.00 25.00           C
ATOM     70  CA  MET    70      53.769  24.333  42.589  1.00 25.00           C
ATOM     71  CA  LYS    71      57.210  25.724  41.647  1.00 25.00           C
ATOM     72  CA  GLN    72      55.803  29.286  41.670  1.00 25.00           C
ATOM     73  CA  LEU    73      54.256  28.680  45.120  1.00 25.00           C
ATOM     74  CA  GLU    74      57.606  27.351  46.416  1.00 25.00           C
ATOM     75  CA  LEU    75      59.395  30.441  45.032  1.00 25.00           C
ATOM     76  CA  MET    76      56.830  32.718  46.733  1.00 25.00           C
ATOM     77  CA  LEU    77      57.336  30.859  50.043  1.00 25.00           C
ATOM     78  CA  THR    78      61.132  31.249  49.709  1.00 25.00           C
ATOM     79  CA  SER    79      60.598  35.015  49.187  1.00 25.00           C
ATOM     80  CA  GLY    80      59.504  38.607  49.850  1.00 25.00           C
ATOM     81  CA  GLU    81      57.961  37.222  53.086  1.00 25.00           C
ATOM     82  CA  LEU    82      54.271  37.249  54.008  1.00 25.00           C
ATOM     83  CA  ASN    83      55.048  39.807  56.724  1.00 25.00           C
ATOM     84  CA  PRO    84      51.590  41.262  56.297  1.00 25.00           C
ATOM     85  CA  ARG    85      50.006  41.028  52.892  1.00 25.00           C
ATOM     86  CA  HIS    86      48.739  38.207  50.699  1.00 25.00           C
ATOM     87  CA  GLN    87      49.042  35.469  53.274  1.00 25.00           C
ATOM     88  CA  HIS    88      48.477  31.704  53.800  1.00 25.00           C
ATOM     89  CA  THR    89      50.034  28.228  53.329  1.00 25.00           C
ATOM     90  CA  VAL    90      52.609  25.453  52.955  1.00 25.00           C
ATOM     91  CA  THR    91      55.531  23.339  51.657  1.00 25.00           C
ATOM     92  CA  LEU    92      55.322  22.462  47.955  1.00 25.00           C
ATOM     93  CA  TYR    93      56.220  19.429  45.892  1.00 25.00           C
ATOM     94  CA  ALA    94      55.501  15.646  45.752  1.00 25.00           C
ATOM     95  CA  LYS    95      54.485  12.007  46.124  1.00 25.00           C
ATOM     96  CA  GLY    96      52.629  11.802  42.806  1.00 25.00           C
ATOM     97  CA  LEU    97      51.686  15.520  42.418  1.00 25.00           C
ATOM     98  CA  THR    98      51.214  18.870  44.171  1.00 25.00           C
ATOM     99  CA  CYS    99      48.026  20.914  44.160  1.00 25.00           C
ATOM    100  CA  LYS   100      45.353  22.221  46.509  1.00 25.00           C
ATOM    101  CA  ALA   101      44.218  21.486  50.050  1.00 25.00           C
ATOM    102  CA  ASP   102      41.778  21.216  52.927  1.00 25.00           C
ATOM    103  CA  THR   103      40.258  18.502  50.722  1.00 25.00           C
ATOM    104  CA  LEU   104      36.971  20.351  50.920  1.00 25.00           C
ATOM    105  CA  SER   105      36.620  24.186  51.048  1.00 25.00           C
ATOM    106  CA  SER   106      40.107  25.132  49.900  1.00 25.00           C
ATOM    107  CA  CYS   107      40.157  22.538  47.066  1.00 25.00           C
ATOM    108  CA  ASP   108      39.902  25.482  44.608  1.00 25.00           C
ATOM    109  CA  TYR   109      43.487  26.384  43.863  1.00 25.00           C
ATOM    110  CA  VAL   110      46.763  25.717  41.990  1.00 25.00           C
ATOM    111  CA  TYR   111      49.420  25.877  44.662  1.00 25.00           C
ATOM    112  CA  LEU   112      50.295  23.836  47.729  1.00 25.00           C
ATOM    113  CA  ALA   113      50.618  20.267  49.054  1.00 25.00           C
ATOM    114  CA  VAL   114      53.679  18.432  50.459  1.00 25.00           C
ATOM    115  CA  TYR   115      56.146  15.556  51.018  1.00 25.00           C
ATOM    116  CA  PRO   116      59.903  15.020  51.326  1.00 25.00           C
ATOM    117  CA  THR   117      62.183  12.863  53.504  1.00 25.00           C
TER
END
