
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   68 (  272),  selected   68 , name T0316TS307_4u-D3
# Molecule2: number of CA atoms   90 (  711),  selected   68 , name T0316_D3.pdb
# PARAMETERS: T0316TS307_4u-D3.T0316_D3.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    28       312 - 339         4.91    24.16
  LONGEST_CONTINUOUS_SEGMENT:    28       313 - 340         4.89    24.28
  LCS_AVERAGE:     20.02

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    17       319 - 335         1.77    24.90
  LCS_AVERAGE:      7.73

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    13       319 - 331         0.93    25.00
  LCS_AVERAGE:      5.52

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:   90
LCS_GDT     M     284     M     284      3    3    5     0    3    3    3    3    3    4    7    9    9   10   10   10   12   16   17   19   21   23   24 
LCS_GDT     S     285     S     285      3    3    5     0    3    3    3    3    3    3    6    7    8    8   10   10   12   13   16   16   17   20   23 
LCS_GDT     T     286     T     286      3    3    5     1    3    3    3    3    3    3    4    7    7    7    7    9    9   12   14   15   16   18   19 
LCS_GDT     E     289     E     289      3    3   12     0    3    3    3    3    3    4    6    7    8   10   11   13   16   17   18   18   20   21   24 
LCS_GDT     A     290     A     290      4    4   12     1    4    5    7    9   10   11   11   12   12   13   16   17   18   19   21   21   24   28   29 
LCS_GDT     S     291     S     291      4    4   12     3    4    5    7    9   10   11   11   12   12   13   16   17   18   19   21   21   24   28   29 
LCS_GDT     Q     292     Q     292      4    4   12     3    4    5    7    9   10   11   11   12   12   13   16   17   18   19   21   22   26   28   29 
LCS_GDT     V     293     V     293      4    4   12     3    4    5    7    9   10   11   11   12   12   13   16   17   18   19   21   23   26   28   29 
LCS_GDT     H     294     H     294      3    3   12     3    3    3    3    3    5    5    7    7    9   12   16   17   18   19   24   24   26   28   29 
LCS_GDT     F     295     F     295      3    3   12     3    3    4    7    9   10   11   11   12   12   13   16   17   18   19   21   23   26   28   29 
LCS_GDT     T     296     T     296      3    3   12     3    3    4    7    9   10   11   11   12   12   13   16   17   18   19   21   22   26   28   29 
LCS_GDT     R     297     R     297      3    3   12     3    3    4    4    4    4    5    6    8    8   10   12   13   15   15   17   20   23   25   27 
LCS_GDT     P     300     P     300      4    4   12     3    3    4    5    5    5    6    6    8    9   10   12   13   16   16   17   18   19   21   24 
LCS_GDT     E     301     E     301      4    4   12     3    3    4    5    5    5    6    7    8    9   10   12   13   16   16   17   18   19   21   24 
LCS_GDT     E     302     E     302      4    4   12     3    3    4    5    5    5    5    7    7    9   10   12   13   16   16   17   18   19   21   24 
LCS_GDT     F     303     F     303      4    4   12     0    3    4    5    5    5    5    7    7    9   10   12   13   16   16   17   18   19   21   24 
LCS_GDT     T     304     T     304      3    3   10     0    3    3    3    4    4    5    7    7    9   10   12   13   16   16   17   18   19   21   23 
LCS_GDT     L     305     L     305      3    4   10     3    3    3    3    4    5    6    7    7    9   10   12   13   16   16   17   18   19   21   23 
LCS_GDT     E     306     E     306      3    4   10     3    3    3    3    4    5    6    7    9    9   10   12   13   16   16   17   18   20   21   24 
LCS_GDT     C     307     C     307      3    4    9     3    3    3    5    5    6    6    7    9    9   10   12   13   16   16   17   18   20   21   24 
LCS_GDT     T     308     T     308      0    4    9     0    0    3    5    5    6    6    6    9    9   10   12   13   16   16   17   18   20   21   24 
LCS_GDT     F     311     F     311      3    3   27     0    3    3    6    7    9   11   11   12   12   13   16   17   22   24   25   26   27   30   30 
LCS_GDT     R     312     R     312      4    5   28     3    4    4    5    5    6    8   10   12   14   16   21   23   24   25   25   29   29   30   30 
LCS_GDT     Y     313     Y     313      4    5   28     3    4    4    5    8   10   11   11   13   16   19   23   24   26   27   28   29   29   30   30 
LCS_GDT     R     314     R     314      4    5   28     3    4    6    9   14   16   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     Q     315     Q     315      4    5   28     3    4   11   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     P     316     P     316      3    5   28     1    4    5    6    9   15   17   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     D     317     D     317      3    3   28     1    3    3    3    5    6    8   12   16   18   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     S     318     S     318      3   15   28     1    3    3    3    4   10   17   18   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     K     319     K     319     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     V     320     V     320     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     T     321     T     321     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     V     322     V     322     13   17   28     5   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     H     323     H     323     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     V     324     V     324     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     K     325     K     325     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     G     326     G     326     13   17   28     3    5   10   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     E     327     E     327     13   17   28     5   11   12   15   16   17   19   20   20   21   22   23   24   25   27   28   29   29   30   30 
LCS_GDT     K     328     K     328     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     T     329     T     329     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     E     330     E     330     13   17   28     6   11   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     V     331     V     331     13   17   28     4    8   12   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     I     332     I     332      6   17   28     3    6    9   13   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     F     333     F     333      5   17   28     3    4    7   10   13   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     A     334     A     334      3   17   28     3    3    4   15   16   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     E     335     E     335      4   17   28     3    5    7   12   14   17   19   20   20   21   22   23   24   26   27   28   29   29   30   30 
LCS_GDT     P     336     P     336      4    5   28     3    3    4    4    5   10   14   15   18   20   22   22   24   26   27   28   29   29   30   30 
LCS_GDT     Q     337     Q     337      4    5   28     3    3    4    4    5    7    9   12   12   17   19   21   24   26   27   28   29   29   30   30 
LCS_GDT     R     338     R     338      4    5   28     3    3    4    5    5    7    9   12   14   17   19   21   24   26   27   28   29   29   30   30 
LCS_GDT     A     339     A     339      3    3   28     3    3    3    5    5    5    8   12   14   17   19   21   24   26   27   28   29   29   30   30 
LCS_GDT     I     340     I     340      3    3   28     3    3    3    5    5    7    9   12   14   17   19   21   24   25   27   28   29   29   30   30 
LCS_GDT     Y     349     Y     349      0    0    8     1    1    1    2    2    3    3    3    5    5    6    6    9   12   14   16   18   19   20   23 
LCS_GDT     D     350     D     350      0    0    4     0    0    0    2    2    2    2    2    5    5    5    9    9   12   14   16   16   18   18   23 
LCS_GDT     G     351     G     351      0    0    4     0    0    1    1    2    2    4    4    4    5    5    8    8    9   11   11   12   14   15   19 
LCS_GDT     E     352     E     352      0    0    4     0    2    2    4    5    5    5    6    6    6    7    8    9    9   10   11   12   14   15   15 
LCS_GDT     E     353     E     353      0    0    3     0    0    0    0    0    0    0    0    0    0    3    3    3    3    5    5    8   10   11   14 
LCS_GDT     G     358     G     358      3    3   12     0    3    3    3    4    5    6    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     L     359     L     359      3    3   12     3    3    3    3    4    5    6    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     I     360     I     360      3    3   12     3    3    3    3    4    5    6    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     D     361     D     361      3    3   12     3    3    3    3    4    4    6    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     N     362     N     362      3    3   12     0    3    3    3    3    3    5    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     A     363     A     363      3    3   12     0    3    3    4    5    5    5    6    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     Y     364     Y     364      4    4   12     0    3    4    4    5    5    6    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     R     365     R     365      4    4   12     3    3    4    4    5    5    6    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     D     366     D     366      4    4   12     3    3    4    4    4    4    5    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     G     367     G     367      4    4   12     3    3    4    4    4    5    6    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     Q     368     Q     368      3    4   12     3    3    3    4    5    5    5    7    9   11   11   11   12   12   12   12   12   14   15   15 
LCS_GDT     V     369     V     369      0    4   12     0    0    3    3    4    4    5    6    6    7    7   11   12   12   12   12   12   14   15   15 
LCS_AVERAGE  LCS_A:  11.09  (   5.52    7.73   20.02 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      6     11     12     15     16     17     19     20     20     21     22     23     24     26     27     28     29     29     30     30 
GDT PERCENT_CA   6.67  12.22  13.33  16.67  17.78  18.89  21.11  22.22  22.22  23.33  24.44  25.56  26.67  28.89  30.00  31.11  32.22  32.22  33.33  33.33
GDT RMS_LOCAL    0.23   0.56   0.77   1.16   1.36   1.61   2.02   2.22   2.22   2.47   2.93   3.31   3.62   4.63   4.69   4.89   5.10   5.10   5.40   5.40
GDT RMS_ALL_CA  24.77  25.05  24.83  24.73  24.76  24.79  24.59  24.49  24.49  24.39  24.44  23.98  24.04  24.21  24.28  24.28  24.16  24.16  24.00  24.00

#      Molecule1      Molecule2       DISTANCE
LGA    M     284      M     284         20.163
LGA    S     285      S     285         22.251
LGA    T     286      T     286         27.543
LGA    E     289      E     289         23.231
LGA    A     290      A     290         18.352
LGA    S     291      S     291         20.262
LGA    Q     292      Q     292         20.978
LGA    V     293      V     293         19.502
LGA    H     294      H     294         17.808
LGA    F     295      F     295         22.226
LGA    T     296      T     296         23.247
LGA    R     297      R     297         29.406
LGA    P     300      P     300         39.804
LGA    E     301      E     301         39.287
LGA    E     302      E     302         36.223
LGA    F     303      F     303         36.061
LGA    T     304      T     304         36.277
LGA    L     305      L     305         30.529
LGA    E     306      E     306         27.250
LGA    C     307      C     307         24.832
LGA    T     308      T     308         20.561
LGA    F     311      F     311         11.509
LGA    R     312      R     312         10.126
LGA    Y     313      Y     313          9.133
LGA    R     314      R     314          3.298
LGA    Q     315      Q     315          2.519
LGA    P     316      P     316          3.933
LGA    D     317      D     317          6.796
LGA    S     318      S     318          4.928
LGA    K     319      K     319          0.941
LGA    V     320      V     320          0.778
LGA    T     321      T     321          0.629
LGA    V     322      V     322          1.277
LGA    H     323      H     323          1.191
LGA    V     324      V     324          1.338
LGA    K     325      K     325          1.564
LGA    G     326      G     326          3.414
LGA    E     327      E     327          2.073
LGA    K     328      K     328          1.426
LGA    T     329      T     329          0.660
LGA    E     330      E     330          1.008
LGA    V     331      V     331          1.402
LGA    I     332      I     332          3.032
LGA    F     333      F     333          3.791
LGA    A     334      A     334          2.559
LGA    E     335      E     335          3.669
LGA    P     336      P     336          8.622
LGA    Q     337      Q     337         12.676
LGA    R     338      R     338         12.926
LGA    A     339      A     339         13.634
LGA    I     340      I     340         13.655
LGA    Y     349      Y     349         21.560
LGA    D     350      D     350         26.520
LGA    G     351      G     351         34.554
LGA    E     352      E     352         42.689
LGA    E     353      E     353         47.406
LGA    G     358      G     358         40.640
LGA    L     359      L     359         34.317
LGA    I     360      I     360         30.974
LGA    D     361      D     361         34.183
LGA    N     362      N     362         33.664
LGA    A     363      A     363         35.448
LGA    Y     364      Y     364         35.513
LGA    R     365      R     365         35.131
LGA    D     366      D     366         40.462
LGA    G     367      G     367         43.507
LGA    Q     368      Q     368         39.001
LGA    V     369      V     369         38.842

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   68   90    4.0     20    2.22    20.556    17.356     0.863

LGA_LOCAL      RMSD =  2.219  Number of atoms =   20  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 24.211  Number of atoms =   68 
Std_ALL_ATOMS  RMSD = 19.011  (standard rmsd on all 68 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.201053 * X  +  -0.961442 * Y  +  -0.187634 * Z  +  30.213434
  Y_new =   0.944380 * X  +   0.241126 * Y  +  -0.223619 * Z  +  23.820358
  Z_new =   0.260240 * X  +  -0.132238 * Y  +   0.956446 * Z  +  13.632131 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.137389    3.004204  [ DEG:    -7.8718    172.1282 ]
  Theta =  -0.263271   -2.878322  [ DEG:   -15.0843   -164.9157 ]
  Phi   =   1.361034   -1.780559  [ DEG:    77.9815   -102.0185 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0316TS307_4u-D3                              
REMARK     2: T0316_D3.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0316TS307_4u-D3.T0316_D3.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   68   90   4.0   20   2.22  17.356    19.01
REMARK  ---------------------------------------------------------- 
MOLECULE T0316TS307_4u-D3
PFRMAT   TS
TARGET   T0316
MODEL    4  UNREFINED
PARENT   1kor_A
ATOM   2324  N   MET   284      29.847  26.413  -3.275  1.00 23.23           N  
ATOM   2325  CA  MET   284      29.966  25.725  -1.989  1.00 21.25           C  
ATOM   2326  C   MET   284      31.251  26.043  -1.230  1.00 19.94           C  
ATOM   2327  O   MET   284      31.197  26.398  -0.055  1.00 23.72           O  
ATOM   2330  N   SER   285      32.422  25.923  -1.884  1.00 22.51           N  
ATOM   2331  CA  SER   285      33.702  26.207  -1.219  1.00 20.12           C  
ATOM   2332  C   SER   285      33.784  27.593  -0.594  1.00 23.88           C  
ATOM   2333  O   SER   285      34.388  27.763   0.465  1.00 20.47           O  
ATOM   2337  N   THR   286      33.191  28.583  -1.256  1.00 21.75           N  
ATOM   2338  CA  THR   286      33.200  29.945  -0.736  1.00 22.36           C  
ATOM   2339  C   THR   286      32.370  29.968   0.541  1.00 22.88           C  
ATOM   2340  O   THR   286      32.773  30.545   1.554  1.00 21.41           O  
ATOM   2346  N   GLU   289      31.204  29.340   0.476  1.00 19.16           N  
ATOM   2347  CA  GLU   289      30.312  29.251   1.626  1.00 23.26           C  
ATOM   2348  C   GLU   289      31.039  28.568   2.789  1.00 22.26           C  
ATOM   2349  O   GLU   289      30.935  28.997   3.938  1.00 21.38           O  
ATOM   2358  N   ALA   290      31.766  27.500   2.477  1.00 21.21           N  
ATOM   2359  CA  ALA   290      32.498  26.752   3.491  1.00 22.70           C  
ATOM   2360  C   ALA   290      33.489  27.636   4.232  1.00 28.33           C  
ATOM   2361  O   ALA   290      33.554  27.599   5.460  1.00 20.77           O  
ATOM   2363  N   SER   291      34.265  28.436   3.500  1.00 23.80           N  
ATOM   2364  CA  SER   291      35.232  29.286   4.181  1.00 21.31           C  
ATOM   2365  C   SER   291      34.554  30.368   5.013  1.00 20.57           C  
ATOM   2366  O   SER   291      35.111  30.818   6.012  1.00 27.02           O  
ATOM   2372  N   GLN   292      33.352  30.777   4.623  1.00 22.89           N  
ATOM   2373  CA  GLN   292      32.634  31.784   5.395  1.00 25.68           C  
ATOM   2374  C   GLN   292      32.286  31.193   6.759  1.00 25.36           C  
ATOM   2375  O   GLN   292      32.414  31.854   7.785  1.00 21.63           O  
ATOM   2380  N   VAL   293      31.838  29.942   6.755  1.00 24.02           N  
ATOM   2381  CA  VAL   293      31.484  29.266   7.990  1.00 23.43           C  
ATOM   2382  C   VAL   293      32.736  29.046   8.825  1.00 23.50           C  
ATOM   2383  O   VAL   293      32.762  29.367  10.013  1.00 24.34           O  
ATOM   2387  N   HIS   294      33.776  28.511   8.188  1.00 20.81           N  
ATOM   2388  CA  HIS   294      35.034  28.229   8.865  1.00 24.97           C  
ATOM   2389  C   HIS   294      35.623  29.475   9.528  1.00 28.32           C  
ATOM   2390  O   HIS   294      36.131  29.410  10.650  1.00 22.06           O  
ATOM   2426  N   PHE   295      28.977  33.772   9.980  1.00 24.31           N  
ATOM   2427  CA  PHE   295      27.671  33.134   9.895  1.00 23.03           C  
ATOM   2428  C   PHE   295      26.598  34.204   9.825  1.00 24.08           C  
ATOM   2429  O   PHE   295      25.795  34.231   8.890  1.00 24.20           O  
ATOM   2440  N   THR   296      26.565  35.076  10.826  1.00 21.86           N  
ATOM   2441  CA  THR   296      25.596  36.162  10.827  1.00 21.97           C  
ATOM   2442  C   THR   296      26.265  37.317  10.076  1.00 26.60           C  
ATOM   2443  O   THR   296      26.615  38.348  10.651  1.00 25.62           O  
ATOM   2452  N   ARG   297      26.470  37.096   8.779  1.00 24.77           N  
ATOM   2453  CA  ARG   297      27.091  38.074   7.890  1.00 21.17           C  
ATOM   2454  C   ARG   297      26.264  38.123   6.598  1.00 25.38           C  
ATOM   2455  O   ARG   297      25.756  37.098   6.135  1.00 18.49           O  
ATOM   2457  N   PRO   300      26.134  39.316   5.997  1.00 19.88           N  
ATOM   2458  CA  PRO   300      25.352  39.457   4.765  1.00 23.90           C  
ATOM   2459  C   PRO   300      25.772  38.568   3.588  1.00 17.45           C  
ATOM   2460  O   PRO   300      24.903  38.071   2.869  1.00 24.05           O  
ATOM   2464  N   GLU   301      27.077  38.354   3.397  1.00 17.94           N  
ATOM   2465  CA  GLU   301      27.554  37.507   2.290  1.00 22.69           C  
ATOM   2466  C   GLU   301      27.011  36.097   2.428  1.00 25.36           C  
ATOM   2467  O   GLU   301      26.526  35.490   1.472  1.00 21.66           O  
ATOM   2473  N   GLU   302      27.131  35.569   3.638  1.00 21.66           N  
ATOM   2474  CA  GLU   302      26.677  34.219   3.924  1.00 20.89           C  
ATOM   2475  C   GLU   302      25.154  34.142   3.800  1.00 24.65           C  
ATOM   2476  O   GLU   302      24.623  33.205   3.210  1.00 24.94           O  
ATOM   2484  N   PHE   303      24.450  35.144   4.322  1.00 23.86           N  
ATOM   2485  CA  PHE   303      22.997  35.152   4.209  1.00 22.00           C  
ATOM   2486  C   PHE   303      22.562  35.227   2.732  1.00 26.20           C  
ATOM   2487  O   PHE   303      21.567  34.619   2.337  1.00 24.09           O  
ATOM   2493  N   THR   304      23.321  35.959   1.922  1.00 26.66           N  
ATOM   2494  CA  THR   304      23.009  36.104   0.501  1.00 26.37           C  
ATOM   2495  C   THR   304      23.198  34.773  -0.221  1.00 22.90           C  
ATOM   2496  O   THR   304      22.315  34.331  -0.960  1.00 24.66           O  
ATOM   2498  N   LEU   305      24.345  34.132  -0.011  1.00 24.03           N  
ATOM   2499  CA  LEU   305      24.591  32.845  -0.638  1.00 24.35           C  
ATOM   2500  C   LEU   305      23.545  31.838  -0.162  1.00 27.08           C  
ATOM   2501  O   LEU   305      23.122  30.966  -0.916  1.00 23.96           O  
ATOM   2506  N   GLU   306      23.112  31.969   1.088  1.00 24.01           N  
ATOM   2507  CA  GLU   306      22.121  31.048   1.627  1.00 25.98           C  
ATOM   2508  C   GLU   306      20.826  31.127   0.817  1.00 25.02           C  
ATOM   2509  O   GLU   306      20.149  30.117   0.619  1.00 21.54           O  
ATOM   2515  N   CYS   307      20.486  32.332   0.356  1.00 24.98           N  
ATOM   2516  CA  CYS   307      19.272  32.526  -0.432  1.00 24.85           C  
ATOM   2517  C   CYS   307      19.361  31.685  -1.702  1.00 21.03           C  
ATOM   2518  O   CYS   307      18.371  31.111  -2.137  1.00 24.77           O  
ATOM   2520  N   THR   308      20.554  31.618  -2.288  1.00 21.19           N  
ATOM   2521  CA  THR   308      20.771  30.826  -3.493  1.00 24.06           C  
ATOM   2522  C   THR   308      20.661  29.335  -3.150  1.00 22.91           C  
ATOM   2523  O   THR   308      19.884  28.596  -3.756  1.00 19.97           O  
ATOM   2532  N   PHE   311      21.439  28.898  -2.167  1.00 20.61           N  
ATOM   2533  CA  PHE   311      21.424  27.491  -1.785  1.00 20.49           C  
ATOM   2534  C   PHE   311      20.054  26.965  -1.391  1.00 21.00           C  
ATOM   2535  O   PHE   311      19.675  25.864  -1.796  1.00 24.76           O  
ATOM   2543  N   ARG   312      19.313  27.742  -0.604  1.00 21.00           N  
ATOM   2544  CA  ARG   312      17.986  27.330  -0.172  1.00 21.50           C  
ATOM   2545  C   ARG   312      17.067  27.158  -1.383  1.00 24.94           C  
ATOM   2546  O   ARG   312      16.303  26.191  -1.465  1.00 24.50           O  
ATOM   2551  N   TYR   313      17.143  28.104  -2.317  1.00 24.94           N  
ATOM   2552  CA  TYR   313      16.342  28.051  -3.536  1.00 22.12           C  
ATOM   2553  C   TYR   313      16.584  26.710  -4.235  1.00 21.64           C  
ATOM   2554  O   TYR   313      15.646  25.993  -4.557  1.00 22.69           O  
ATOM   2561  N   ARG   314      17.856  26.391  -4.465  1.00 22.38           N  
ATOM   2562  CA  ARG   314      18.256  25.158  -5.128  1.00 25.32           C  
ATOM   2563  C   ARG   314      17.830  23.913  -4.347  1.00 29.80           C  
ATOM   2564  O   ARG   314      17.293  22.966  -4.919  1.00 25.93           O  
ATOM   2568  N   GLN   315      18.063  23.929  -3.040  1.00 25.65           N  
ATOM   2569  CA  GLN   315      17.734  22.789  -2.179  1.00 25.82           C  
ATOM   2570  C   GLN   315      16.247  22.432  -2.091  1.00 27.84           C  
ATOM   2571  O   GLN   315      15.892  21.297  -1.763  1.00 27.03           O  
ATOM   2573  N   PRO   316      15.378  23.392  -2.384  1.00 28.57           N  
ATOM   2574  CA  PRO   316      13.942  23.153  -2.304  1.00 27.76           C  
ATOM   2575  C   PRO   316      13.498  22.035  -3.253  1.00 24.66           C  
ATOM   2576  O   PRO   316      12.435  21.448  -3.080  1.00 27.45           O  
ATOM   2584  N   ASP   317      14.323  21.726  -4.241  1.00 23.59           N  
ATOM   2585  CA  ASP   317      13.985  20.674  -5.191  1.00 22.75           C  
ATOM   2586  C   ASP   317      14.493  19.311  -4.736  1.00 23.94           C  
ATOM   2587  O   ASP   317      14.147  18.292  -5.324  1.00 21.20           O  
ATOM   2590  N   SER   318      15.316  19.293  -3.694  1.00 21.77           N  
ATOM   2591  CA  SER   318      15.869  18.032  -3.213  1.00 23.30           C  
ATOM   2592  C   SER   318      14.876  17.255  -2.351  1.00 24.88           C  
ATOM   2593  O   SER   318      14.884  17.347  -1.116  1.00 26.58           O  
ATOM   2608  N   LYS   319      14.617   9.893  -1.863  1.00 25.83           N  
ATOM   2609  CA  LYS   319      15.266   8.967  -0.942  1.00 19.49           C  
ATOM   2610  C   LYS   319      16.588   8.425  -1.467  1.00 21.19           C  
ATOM   2611  O   LYS   319      16.708   8.051  -2.634  1.00 23.00           O  
ATOM   2615  N   VAL   320      17.582   8.386  -0.585  1.00 21.64           N  
ATOM   2616  CA  VAL   320      18.901   7.864  -0.917  1.00 21.28           C  
ATOM   2617  C   VAL   320      19.068   6.550  -0.167  1.00 24.03           C  
ATOM   2618  O   VAL   320      18.653   6.440   0.992  1.00 21.57           O  
ATOM   2620  N   THR   321      19.641   5.548  -0.828  1.00 22.88           N  
ATOM   2621  CA  THR   321      19.873   4.261  -0.173  1.00 24.88           C  
ATOM   2622  C   THR   321      21.374   4.038  -0.173  1.00 25.74           C  
ATOM   2623  O   THR   321      21.998   3.998  -1.233  1.00 22.72           O  
ATOM   2631  N   VAL   322      21.946   3.904   1.022  1.00 21.65           N  
ATOM   2632  CA  VAL   322      23.381   3.700   1.165  1.00 20.35           C  
ATOM   2633  C   VAL   322      23.759   2.387   1.847  1.00 22.84           C  
ATOM   2634  O   VAL   322      22.981   1.809   2.614  1.00 22.67           O  
ATOM   2639  N   HIS   323      24.976   1.943   1.558  1.00 22.40           N  
ATOM   2640  CA  HIS   323      25.528   0.708   2.098  1.00 26.21           C  
ATOM   2641  C   HIS   323      26.764   1.071   2.923  1.00 27.83           C  
ATOM   2642  O   HIS   323      27.720   1.664   2.403  1.00 26.44           O  
ATOM   2648  N   VAL   324      26.733   0.720   4.206  1.00 25.49           N  
ATOM   2649  CA  VAL   324      27.830   1.013   5.121  1.00 24.52           C  
ATOM   2650  C   VAL   324      28.659  -0.238   5.395  1.00 29.86           C  
ATOM   2651  O   VAL   324      28.122  -1.284   5.753  1.00 24.09           O  
ATOM   2656  N   LYS   325      29.971  -0.135   5.215  1.00 28.65           N  
ATOM   2657  CA  LYS   325      30.840  -1.274   5.463  1.00 29.55           C  
ATOM   2658  C   LYS   325      32.238  -0.833   5.862  1.00 30.70           C  
ATOM   2659  O   LYS   325      32.875  -0.033   5.174  1.00 27.45           O  
ATOM   2668  N   GLY   326      32.684  -1.365   6.994  1.00 27.71           N  
ATOM   2669  CA  GLY   326      33.994  -1.097   7.565  1.00 26.72           C  
ATOM   2670  C   GLY   326      34.652   0.233   7.188  1.00 30.83           C  
ATOM   2671  O   GLY   326      35.625   0.276   6.425  1.00 29.02           O  
ATOM   2677  N   GLU   327      34.102   1.309   7.745  1.00 27.16           N  
ATOM   2678  CA  GLU   327      34.627   2.647   7.535  1.00 30.51           C  
ATOM   2679  C   GLU   327      34.150   3.444   6.336  1.00 30.48           C  
ATOM   2680  O   GLU   327      34.331   4.666   6.285  1.00 32.59           O  
ATOM   2681  N   LYS   328      33.530   2.774   5.377  1.00 29.45           N  
ATOM   2682  CA  LYS   328      33.090   3.457   4.178  1.00 28.17           C  
ATOM   2683  C   LYS   328      31.585   3.531   3.991  1.00 30.78           C  
ATOM   2684  O   LYS   328      30.830   2.750   4.579  1.00 26.81           O  
ATOM   2689  N   THR   329      31.168   4.489   3.167  1.00 26.23           N  
ATOM   2690  CA  THR   329      29.765   4.714   2.841  1.00 29.86           C  
ATOM   2691  C   THR   329      29.608   4.607   1.326  1.00 30.95           C  
ATOM   2692  O   THR   329      30.297   5.306   0.581  1.00 33.42           O  
ATOM   2696  N   GLU   330      28.707   3.742   0.869  1.00 27.93           N  
ATOM   2697  CA  GLU   330      28.477   3.586  -0.565  1.00 28.93           C  
ATOM   2698  C   GLU   330      27.044   3.878  -0.965  1.00 28.55           C  
ATOM   2699  O   GLU   330      26.115   3.285  -0.418  1.00 28.78           O  
ATOM   2708  N   VAL   331      26.867   4.800  -1.909  1.00 26.72           N  
ATOM   2709  CA  VAL   331      25.540   5.108  -2.417  1.00 21.94           C  
ATOM   2710  C   VAL   331      25.239   3.878  -3.252  1.00 21.02           C  
ATOM   2711  O   VAL   331      26.072   3.433  -4.039  1.00 22.54           O  
ATOM   2715  N   ILE   332      24.048   3.331  -3.084  1.00 22.26           N  
ATOM   2716  CA  ILE   332      23.701   2.119  -3.788  1.00 22.82           C  
ATOM   2717  C   ILE   332      22.383   2.246  -4.554  1.00 26.76           C  
ATOM   2718  O   ILE   332      22.059   1.419  -5.408  1.00 26.01           O  
ATOM   2722  N   PHE   333      21.636   3.302  -4.244  1.00 28.29           N  
ATOM   2723  CA  PHE   333      20.373   3.551  -4.919  1.00 23.16           C  
ATOM   2724  C   PHE   333      19.822   4.920  -4.556  1.00 27.86           C  
ATOM   2725  O   PHE   333      20.261   5.530  -3.584  1.00 24.72           O  
ATOM   2726  N   ALA   334      18.878   5.412  -5.352  1.00 23.66           N  
ATOM   2727  CA  ALA   334      18.238   6.691  -5.093  1.00 24.54           C  
ATOM   2728  C   ALA   334      16.958   6.789  -5.911  1.00 25.78           C  
ATOM   2729  O   ALA   334      16.840   6.189  -6.982  1.00 25.37           O  
ATOM   2737  N   GLU   335      15.987   7.524  -5.388  1.00 27.05           N  
ATOM   2738  CA  GLU   335      14.716   7.699  -6.077  1.00 25.73           C  
ATOM   2739  C   GLU   335      14.105   9.028  -5.666  1.00 27.21           C  
ATOM   2740  O   GLU   335      14.459   9.581  -4.620  1.00 25.23           O  
ATOM   2746  N   PRO   336      13.203   9.548  -6.496  1.00 23.77           N  
ATOM   2747  CA  PRO   336      12.551  10.823  -6.221  1.00 24.03           C  
ATOM   2748  C   PRO   336      11.234  10.966  -6.979  1.00 22.16           C  
ATOM   2749  O   PRO   336      11.119  10.537  -8.121  1.00 23.55           O  
ATOM   2751  N   GLN   337      10.222  11.584  -6.343  1.00 24.18           N  
ATOM   2752  CA  GLN   337       8.897  11.798  -6.938  1.00 29.74           C  
ATOM   2753  C   GLN   337       8.974  12.559  -8.262  1.00 30.05           C  
ATOM   2754  O   GLN   337       8.224  12.276  -9.193  1.00 30.38           O  
ATOM   2758  N   ARG   338       9.877  13.534  -8.325  1.00 28.55           N  
ATOM   2759  CA  ARG   338      10.056  14.336  -9.531  1.00 28.03           C  
ATOM   2760  C   ARG   338      11.464  14.174 -10.103  1.00 28.12           C  
ATOM   2761  O   ARG   338      12.136  15.150 -10.432  1.00 29.13           O  
ATOM   2767  N   ALA   339      11.908  12.926 -10.212  1.00 27.20           N  
ATOM   2768  CA  ALA   339      13.220  12.625 -10.775  1.00 26.68           C  
ATOM   2769  C   ALA   339      13.290  13.134 -12.221  1.00 28.01           C  
ATOM   2770  O   ALA   339      12.305  13.057 -12.958  1.00 26.83           O  
ATOM   2773  N   ILE   340      14.452  13.648 -12.618  1.00 26.42           N  
ATOM   2774  CA  ILE   340      14.648  14.157 -13.973  1.00 28.61           C  
ATOM   2775  C   ILE   340      15.312  13.100 -14.852  1.00 28.18           C  
ATOM   2776  O   ILE   340      15.603  13.343 -16.028  1.00 25.33           O  
ATOM   2781  N   TYR   349      15.544  11.926 -14.272  1.00 25.52           N  
ATOM   2782  CA  TYR   349      16.170  10.824 -14.992  1.00 29.75           C  
ATOM   2783  C   TYR   349      15.184  10.180 -15.970  1.00 34.46           C  
ATOM   2784  O   TYR   349      14.188   9.596 -15.558  1.00 31.86           O  
ATOM   2793  N   ASP   350      15.491  10.296 -17.264  1.00 40.69           N  
ATOM   2794  CA  ASP   350      14.665   9.785 -18.370  1.00 48.50           C  
ATOM   2795  C   ASP   350      13.202  10.203 -18.322  1.00 54.02           C  
ATOM   2796  O   ASP   350      12.625  10.288 -17.210  1.00 56.77           O  
ATOM   2804  N   GLY   351      12.644  14.680 -26.545  1.00 66.67           N  
ATOM   2805  CA  GLY   351      13.616  13.647 -27.029  1.00 62.70           C  
ATOM   2806  C   GLY   351      14.103  13.968 -28.425  1.00 63.85           C  
ATOM   2807  O   GLY   351      13.368  14.542 -29.238  1.00 67.35           O  
ATOM   2820  N   GLU   352      16.991  12.782 -31.876  1.00 44.60           N  
ATOM   2821  CA  GLU   352      17.497  11.669 -32.635  1.00 41.47           C  
ATOM   2822  C   GLU   352      18.965  11.958 -32.830  1.00 40.10           C  
ATOM   2823  O   GLU   352      19.415  13.095 -32.648  1.00 34.68           O  
ATOM   2859  N   GLU   353      24.835  15.787 -34.386  1.00 22.83           N  
ATOM   2860  CA  GLU   353      25.820  16.285 -35.340  1.00 22.62           C  
ATOM   2861  C   GLU   353      25.780  17.806 -35.351  1.00 18.70           C  
ATOM   2862  O   GLU   353      26.818  18.455 -35.308  1.00 26.01           O  
ATOM   2868  N   GLY   358      24.569  18.361 -35.399  1.00 23.73           N  
ATOM   2869  CA  GLY   358      24.407  19.806 -35.420  1.00 22.70           C  
ATOM   2870  C   GLY   358      25.009  20.443 -34.182  1.00 18.94           C  
ATOM   2871  O   GLY   358      25.754  21.416 -34.264  1.00 21.76           O  
ATOM   2872  N   LEU   359      24.662  19.883 -33.031  1.00 21.08           N  
ATOM   2873  CA  LEU   359      25.165  20.339 -31.746  1.00 21.90           C  
ATOM   2874  C   LEU   359      26.691  20.373 -31.816  1.00 23.33           C  
ATOM   2875  O   LEU   359      27.324  21.379 -31.493  1.00 23.48           O  
ATOM   2883  N   ILE   360      27.284  19.269 -32.260  1.00 21.89           N  
ATOM   2884  CA  ILE   360      28.731  19.190 -32.353  1.00 22.94           C  
ATOM   2885  C   ILE   360      29.331  20.199 -33.331  1.00 25.18           C  
ATOM   2886  O   ILE   360      30.343  20.828 -33.020  1.00 23.88           O  
ATOM   2891  N   ASP   361      28.715  20.357 -34.502  1.00 24.61           N  
ATOM   2892  CA  ASP   361      29.223  21.303 -35.498  1.00 27.98           C  
ATOM   2893  C   ASP   361      29.285  22.722 -34.936  1.00 22.02           C  
ATOM   2894  O   ASP   361      30.291  23.411 -35.084  1.00 22.28           O  
ATOM   2949  N   ASN   362      37.369  25.481 -34.797  1.00 23.63           N  
ATOM   2950  CA  ASN   362      37.837  25.361 -36.174  1.00 22.97           C  
ATOM   2951  C   ASN   362      38.400  26.703 -36.667  1.00 20.26           C  
ATOM   2952  O   ASN   362      39.437  26.753 -37.325  1.00 23.38           O  
ATOM   2960  N   ALA   363      37.708  27.789 -36.342  1.00 25.60           N  
ATOM   2961  CA  ALA   363      38.146  29.124 -36.729  1.00 24.03           C  
ATOM   2962  C   ALA   363      39.529  29.378 -36.130  1.00 27.23           C  
ATOM   2963  O   ALA   363      40.456  29.781 -36.828  1.00 24.60           O  
ATOM   2967  N   TYR   364      39.659  29.124 -34.830  1.00 25.73           N  
ATOM   2968  CA  TYR   364      40.933  29.300 -34.137  1.00 26.42           C  
ATOM   2969  C   TYR   364      42.036  28.499 -34.839  1.00 25.36           C  
ATOM   2970  O   TYR   364      43.153  28.983 -35.004  1.00 23.38           O  
ATOM   2978  N   ARG   365      41.717  27.272 -35.252  1.00 28.19           N  
ATOM   2979  CA  ARG   365      42.688  26.410 -35.935  1.00 27.63           C  
ATOM   2980  C   ARG   365      43.103  26.962 -37.297  1.00 28.92           C  
ATOM   2981  O   ARG   365      44.278  26.924 -37.650  1.00 30.30           O  
ATOM   2983  N   ASP   366      42.137  27.463 -38.060  1.00 31.61           N  
ATOM   2984  CA  ASP   366      42.420  28.015 -39.385  1.00 30.97           C  
ATOM   2985  C   ASP   366      43.270  29.272 -39.273  1.00 35.44           C  
ATOM   2986  O   ASP   366      44.160  29.507 -40.100  1.00 35.17           O  
ATOM   2991  N   GLY   367      43.002  30.080 -38.252  1.00 28.43           N  
ATOM   2992  CA  GLY   367      43.773  31.297 -38.063  1.00 32.32           C  
ATOM   2993  C   GLY   367      45.212  30.956 -37.710  1.00 35.61           C  
ATOM   2994  O   GLY   367      46.129  31.629 -38.161  1.00 35.85           O  
ATOM   2998  N   GLN   368      45.428  29.915 -36.912  1.00 39.36           N  
ATOM   2999  CA  GLN   368      46.799  29.544 -36.580  1.00 45.52           C  
ATOM   3000  C   GLN   368      47.378  29.077 -37.899  1.00 50.49           C  
ATOM   3001  O   GLN   368      48.596  29.026 -38.089  1.00 50.12           O  
ATOM   3007  N   VAL   369      46.462  28.756 -38.809  1.00 57.04           N  
ATOM   3008  CA  VAL   369      46.767  28.284 -40.152  1.00 60.09           C  
ATOM   3009  C   VAL   369      47.392  26.932 -40.014  1.00 62.64           C  
ATOM   3010  O   VAL   369      46.741  25.950 -40.434  1.00 66.07           O  
TER
END
