
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  153 (  153),  selected  153 , name T0332TS168_3-D1
# Molecule2: number of CA atoms  153 ( 1194),  selected  153 , name T0332_D1.pdb
# PARAMETERS: T0332TS168_3-D1.T0332_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   153         7 - 159         3.09     3.09
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    52       107 - 158         1.99     3.52
  LONGEST_CONTINUOUS_SEGMENT:    52       108 - 159         1.88     3.60
  LCS_AVERAGE:     21.78

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    22       137 - 158         0.94     3.92
  LONGEST_CONTINUOUS_SEGMENT:    22       138 - 159         0.83     4.70
  LCS_AVERAGE:      6.97

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  153
LCS_GDT     R       7     R       7      5   34  153    11   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L       8     L       8      5   34  153     8   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I       9     I       9      5   34  153     4   23   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      10     V      10      5   34  153     3   30   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      11     V      11      5   34  153     3   11   43   73   94  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     A      12     A      12      4   34  153     6   26   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S      13     S      13      4   34  153     7   19   40   65   93  110  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      14     L      14      4   34  153     5   14   50   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I      15     I      15      4   34  153     6   23   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     D      16     D      16      4   34  153    12   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     K      17     K      17      4   34  153     0    6   33   78   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     P      18     P      18     16   34  153    11   14   34   73   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     T      19     T      19     16   34  153    12   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     N      20     N      20     16   34  153    11   19   44   74   97  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      21     L      21     16   34  153    11   13   38   72   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G      22     G      22     16   34  153    11   19   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G      23     G      23     16   34  153    12   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      24     L      24     16   34  153    11   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     C      25     C      25     16   34  153    11   19   44   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     R      26     R      26     16   34  153    11   23   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     T      27     T      27     16   34  153    11   28   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     C      28     C      28     16   34  153    12   32   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E      29     E      29     16   34  153     7   23   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      30     V      30     16   34  153    11   22   55   79   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     F      31     F      31     16   34  153     8   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G      32     G      32     16   34  153     7   22   51   75   98  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     A      33     A      33     16   34  153     3   28   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S      34     S      34      8   34  153     4   23   51   79   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      35     V      35      8   34  153    11   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      36     L      36      8   34  153    12   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      37     V      37      8   34  153    10   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      38     V      38      8   34  153     8   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G      39     G      39      8   34  153    10   28   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S      40     S      40      3   34  153     3    9   14   35   53   74  107  121  137  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      41     L      41      3   26  153     3    3    5    5   18   24   40   45   61   76  118  138  142  149  150  152  153  153  153  153 
LCS_GDT     Q      42     Q      42      3   26  153     3    7   21   39   53   87  107  121  136  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     C      43     C      43      6   26  153     3   17   39   78   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I      44     I      44      6   14  153     3    6   19   34   48   80  105  131  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S      45     S      45      6   14  153     3    9   26   65   92  110  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     D      46     D      46      8   15  153     3   11   35   67   94  110  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     K      47     K      47      8   15  153     7   11   22   56   80  107  124  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q      48     Q      48      8   15  153     7   16   39   69   95  111  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     F      49     F      49      8   15  153     7   17   42   75   95  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q      50     Q      50      8   15  153     7   11   28   56   84  108  124  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     H      51     H      51      8   15  153     7   11   22   56   81  107  124  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      52     L      52      8   15  153     7   17   36   69   94  111  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S      53     S      53      8   15  153     7   17   39   75   95  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      54     V      54      5   15  153     4    7   26   52   85  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S      55     S      55      5   15  153     4    7   20   50   83  107  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     A      56     A      56      5   15  153     4   15   34   64   94  110  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E      57     E      57      5   15  153     4    8   23   55   89  110  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q      58     Q      58      5   15  153     4    9   22   54   83  106  124  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     W      59     W      59      5   24  153     6   27   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      60     L      60      5   24  153     8   23   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     P      61     P      61      3   24  153     3    7   12   30   47   84  114  125  136  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      62     L      62      5   24  153    12   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      63     V      63      5   24  153    11   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E      64     E      64      5   24  153    12   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      65     V      65      5   24  153    12   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     K      66     K      66      5   24  153     5   22   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     P      67     P      67      3   24  153     3    3    8   14   19   27   69  105  128  136  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     P      68     P      68      3   24  153     4    9   27   59   95  111  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q      69     Q      69     11   24  153     4   18   41   64   90  108  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      70     L      70     13   24  153    11   21   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I      71     I      71     13   24  153    11   21   48   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     D      72     D      72     13   24  153    11   21   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Y      73     Y      73     13   24  153    11   26   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      74     L      74     13   24  153    11   21   55   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q      75     Q      75     13   24  153    11   21   36   78   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q      76     Q      76     13   24  153    11   21   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     K      77     K      77     13   24  153    11   23   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     K      78     K      78     13   24  153    11   21   33   77   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     T      79     T      79     13   24  153    11   21   33   77   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E      80     E      80     13   24  153     3   14   36   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G      81     G      81     13   24  153     9   26   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Y      82     Y      82     13   24  153    10   26   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     T      83     T      83      4   20  153     3    4    6   22   30   50   82  102  124  134  144  149  149  150  151  152  153  153  153  153 
LCS_GDT     I      84     I      84      4   20  153     9   17   21   32   41   49   81  105  124  134  144  149  149  150  151  152  153  153  153  153 
LCS_GDT     I      85     I      85      4   20  153     4   17   21   32   42   78  104  122  133  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G      86     G      86      4   20  153     4    5   14   47   81  107  124  132  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V      87     V      87      4   20  153     4   16   40   78   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E      88     E      88      4   20  153     3   12   29   62   96  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q      89     Q      89      4   20  153     3    6   18   28   49   79  104  122  133  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     T      90     T      90      4    8  153     3    5    7   10   20   39   49   68   92  114  131  140  146  150  151  152  153  153  153  153 
LCS_GDT     A      91     A      91      4    8  153     3    4    5    9   16   28   42   59   73   92  110  126  141  145  149  151  153  153  153  153 
LCS_GDT     K      92     K      92      4    9  153     3    8   16   39   59   75   94  109  119  131  141  146  147  150  151  152  153  153  153  153 
LCS_GDT     S      93     S      93      7    9  153     8   32   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      94     L      94      7    9  153     3    6   56   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     D      95     D      95      7    9  153     4   21   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L      96     L      96      7    9  153     4    9   29   56   93  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     T      97     T      97      7    9  153     4    9   23   46   84  107  124  132  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q      98     Q      98      7    9  153     4   15   33   74   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Y      99     Y      99      7    9  153     4    9   33   74   98  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     C     100     C     100      6    9  153     4   15   35   74   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     F     101     F     101      6    9  153     6   26   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     P     102     P     102      5    9  153     3   15   35   65   91  111  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E     103     E     103      3    9  153     0   12   34   68   95  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     K     104     K     104      3    8  153     3    7   21   50   74  101  120  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S     105     S     105      4   14  153     3    9   19   34   59   81  110  125  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     106     L     106      5   23  153     3    9   19   35   59   89  112  132  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     107     L     107      5   52  153     3    5    9   27   44   77  112  132  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     108     L     108      5   52  153     8   25   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     109     L     109      5   52  153     4   12   29   71   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G     110     G     110      5   52  153     3   19   41   69   96  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     N     111     N     111     15   52  153     7   29   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E     112     E     112     15   52  153     8   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     R     113     R     113     15   52  153     6   28   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E     114     E     114     15   52  153     6   26   47   75   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G     115     G     115     15   52  153     7   30   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I     116     I     116     15   52  153     6   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     P     117     P     117     15   52  153     8   30   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     A     118     A     118     15   52  153    11   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     N     119     N     119     15   52  153     5   30   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     120     L     120     15   52  153    12   30   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I     121     I     121     15   52  153     5   30   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q     122     Q     122     15   52  153     3   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q     123     Q     123     15   52  153    11   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     124     L     124     15   52  153    12   30   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     D     125     D     125     15   52  153    11   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V     126     V     126     15   52  153    12   32   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     C     127     C     127     13   52  153     3   19   51   79   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V     128     V     128      6   52  153     3   17   51   79   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E     129     E     129      5   52  153     3    5   23   34   63  105  120  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I     130     I     130      5   52  153     3    9   16   29   42   60  102  124  137  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     P     131     P     131      4   52  153     3    6   21   40   68  104  120  132  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q     132     Q     132      4   52  153    12   29   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q     133     Q     133      4   52  153    15   19   49   78   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G     134     G     134      4   52  153     3   27   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I     135     I     135      4   52  153     6   21   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I     136     I     136      3   52  153     3   20   43   73   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     R     137     R     137     22   52  153     3   21   41   73   91  111  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S     138     S     138     22   52  153    12   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     139     L     139     22   52  153    10   28   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     N     140     N     140     22   52  153     6   28   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V     141     V     141     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     H     142     H     142     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     V     143     V     143     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S     144     S     144     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     G     145     G     145     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     A     146     A     146     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     147     L     147     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     148     L     148     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     I     149     I     149     22   52  153    15   30   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     W     150     W     150     22   52  153    15   30   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     E     151     E     151     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Y     152     Y     152     22   52  153    15   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     T     153     T     153     22   52  153    15   30   55   76   98  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     R     154     R     154     22   52  153    13   30   56   77   98  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q     155     Q     155     22   52  153    11   33   58   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     Q     156     Q     156     22   52  153    15   30   57   80   99  112  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     157     L     157     22   52  153     4   18   43   73   91  106  122  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     L     158     L     158     22   52  153     4   20   50   74   94  111  125  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_GDT     S     159     S     159     22   52  153     0   15   42   71   91  106  122  133  139  141  145  149  149  150  151  152  153  153  153  153 
LCS_AVERAGE  LCS_A:  42.92  (   6.97   21.78  100.00 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     15     33     58     80     99    112    125    133    139    141    145    149    149    150    151    152    153    153    153    153 
GDT PERCENT_CA   9.80  21.57  37.91  52.29  64.71  73.20  81.70  86.93  90.85  92.16  94.77  97.39  97.39  98.04  98.69  99.35 100.00 100.00 100.00 100.00
GDT RMS_LOCAL    0.23   0.76   1.05   1.32   1.62   1.80   2.05   2.23   2.38   2.46   2.58   2.75   2.75   2.82   2.90   2.99   3.09   3.09   3.09   3.09
GDT RMS_ALL_CA   4.68   3.25   3.20   3.15   3.16   3.16   3.11   3.11   3.11   3.10   3.10   3.10   3.10   3.10   3.09   3.09   3.09   3.09   3.09   3.09

#      Molecule1      Molecule2       DISTANCE
LGA    R       7      R       7          1.050
LGA    L       8      L       8          1.520
LGA    I       9      I       9          2.186
LGA    V      10      V      10          2.203
LGA    V      11      V      11          3.442
LGA    A      12      A      12          1.488
LGA    S      13      S      13          3.271
LGA    L      14      L      14          1.732
LGA    I      15      I      15          0.740
LGA    D      16      D      16          1.664
LGA    K      17      K      17          1.898
LGA    P      18      P      18          3.567
LGA    T      19      T      19          1.845
LGA    N      20      N      20          3.424
LGA    L      21      L      21          3.336
LGA    G      22      G      22          1.621
LGA    G      23      G      23          1.303
LGA    L      24      L      24          1.943
LGA    C      25      C      25          1.807
LGA    R      26      R      26          0.945
LGA    T      27      T      27          1.027
LGA    C      28      C      28          0.724
LGA    E      29      E      29          1.212
LGA    V      30      V      30          1.732
LGA    F      31      F      31          1.452
LGA    G      32      G      32          2.728
LGA    A      33      A      33          1.681
LGA    S      34      S      34          2.761
LGA    V      35      V      35          0.833
LGA    L      36      L      36          0.768
LGA    V      37      V      37          1.344
LGA    V      38      V      38          1.429
LGA    G      39      G      39          1.854
LGA    S      40      S      40          5.699
LGA    L      41      L      41          9.430
LGA    Q      42      Q      42          5.861
LGA    C      43      C      43          2.415
LGA    I      44      I      44          5.025
LGA    S      45      S      45          3.459
LGA    D      46      D      46          2.888
LGA    K      47      K      47          3.962
LGA    Q      48      Q      48          2.470
LGA    F      49      F      49          2.019
LGA    Q      50      Q      50          3.555
LGA    H      51      H      51          3.805
LGA    L      52      L      52          2.532
LGA    S      53      S      53          2.303
LGA    V      54      V      54          2.860
LGA    S      55      S      55          3.309
LGA    A      56      A      56          3.291
LGA    E      57      E      57          3.272
LGA    Q      58      Q      58          3.617
LGA    W      59      W      59          1.255
LGA    L      60      L      60          1.087
LGA    P      61      P      61          5.136
LGA    L      62      L      62          0.630
LGA    V      63      V      63          1.512
LGA    E      64      E      64          1.656
LGA    V      65      V      65          0.957
LGA    K      66      K      66          1.062
LGA    P      67      P      67          6.252
LGA    P      68      P      68          2.704
LGA    Q      69      Q      69          3.841
LGA    L      70      L      70          0.704
LGA    I      71      I      71          1.498
LGA    D      72      D      72          1.465
LGA    Y      73      Y      73          0.850
LGA    L      74      L      74          1.349
LGA    Q      75      Q      75          2.474
LGA    Q      76      Q      76          2.355
LGA    K      77      K      77          1.577
LGA    K      78      K      78          2.577
LGA    T      79      T      79          3.167
LGA    E      80      E      80          1.989
LGA    G      81      G      81          1.449
LGA    Y      82      Y      82          0.998
LGA    T      83      T      83          6.888
LGA    I      84      I      84          6.606
LGA    I      85      I      85          5.400
LGA    G      86      G      86          4.097
LGA    V      87      V      87          2.328
LGA    E      88      E      88          3.120
LGA    Q      89      Q      89          5.885
LGA    T      90      T      90          9.430
LGA    A      91      A      91         10.998
LGA    K      92      K      92          8.237
LGA    S      93      S      93          2.385
LGA    L      94      L      94          2.207
LGA    D      95      D      95          1.991
LGA    L      96      L      96          3.017
LGA    T      97      T      97          4.034
LGA    Q      98      Q      98          3.044
LGA    Y      99      Y      99          3.041
LGA    C     100      C     100          2.956
LGA    F     101      F     101          1.793
LGA    P     102      P     102          3.717
LGA    E     103      E     103          2.494
LGA    K     104      K     104          3.933
LGA    S     105      S     105          4.954
LGA    L     106      L     106          4.388
LGA    L     107      L     107          4.192
LGA    L     108      L     108          0.945
LGA    L     109      L     109          1.956
LGA    G     110      G     110          3.242
LGA    N     111      N     111          2.258
LGA    E     112      E     112          2.196
LGA    R     113      R     113          1.635
LGA    E     114      E     114          3.176
LGA    G     115      G     115          0.713
LGA    I     116      I     116          0.703
LGA    P     117      P     117          0.945
LGA    A     118      A     118          1.290
LGA    N     119      N     119          1.907
LGA    L     120      L     120          1.997
LGA    I     121      I     121          2.011
LGA    Q     122      Q     122          2.107
LGA    Q     123      Q     123          1.561
LGA    L     124      L     124          1.752
LGA    D     125      D     125          0.587
LGA    V     126      V     126          0.741
LGA    C     127      C     127          1.664
LGA    V     128      V     128          1.556
LGA    E     129      E     129          3.865
LGA    I     130      I     130          5.500
LGA    P     131      P     131          4.272
LGA    Q     132      Q     132          0.423
LGA    Q     133      Q     133          2.110
LGA    G     134      G     134          2.301
LGA    I     135      I     135          2.383
LGA    I     136      I     136          3.521
LGA    R     137      R     137          3.702
LGA    S     138      S     138          1.659
LGA    L     139      L     139          1.166
LGA    N     140      N     140          1.463
LGA    V     141      V     141          1.487
LGA    H     142      H     142          1.937
LGA    V     143      V     143          1.695
LGA    S     144      S     144          1.457
LGA    G     145      G     145          1.889
LGA    A     146      A     146          2.083
LGA    L     147      L     147          1.645
LGA    L     148      L     148          1.517
LGA    I     149      I     149          2.438
LGA    W     150      W     150          2.447
LGA    E     151      E     151          1.487
LGA    Y     152      Y     152          1.943
LGA    T     153      T     153          2.858
LGA    R     154      R     154          2.447
LGA    Q     155      Q     155          1.245
LGA    Q     156      Q     156          2.377
LGA    L     157      L     157          3.798
LGA    L     158      L     158          2.976
LGA    S     159      S     159          3.667

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  153  153    4.0    133    2.23    65.033    59.320     5.715

LGA_LOCAL      RMSD =  2.227  Number of atoms =  133  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  3.146  Number of atoms =  153 
Std_ALL_ATOMS  RMSD =  3.089  (standard rmsd on all 153 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.536149 * X  +   0.789122 * Y  +   0.299717 * Z  +  27.014486
  Y_new =  -0.280886 * X  +   0.501612 * Y  +  -0.818223 * Z  +  42.508614
  Z_new =  -0.796019 * X  +   0.354503 * Y  +   0.490592 * Z  +  30.697271 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   0.625735   -2.515858  [ DEG:    35.8520   -144.1480 ]
  Theta =   0.920690    2.220903  [ DEG:    52.7516    127.2484 ]
  Phi   =  -0.482581    2.659012  [ DEG:   -27.6498    152.3502 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0332TS168_3-D1                               
REMARK     2: T0332_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0332TS168_3-D1.T0332_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  153  153   4.0  133   2.23  59.320     3.09
REMARK  ---------------------------------------------------------- 
MOLECULE T0332TS168_3-D1
PFRMAT TS
TARGET T0332
MODEL 3
PARENT N/A
ATOM      7  CA  ARG     7      21.751  37.740  39.941  1.00 25.00           C
ATOM      8  CA  LEU     8      23.206  37.519  36.419  1.00 25.00           C
ATOM      9  CA  ILE     9      22.708  41.285  36.542  1.00 25.00           C
ATOM     10  CA  VAL    10      24.053  41.890  33.087  1.00 25.00           C
ATOM     11  CA  VAL    11      26.281  44.286  31.220  1.00 25.00           C
ATOM     12  CA  ALA    12      28.597  47.092  30.105  1.00 25.00           C
ATOM     13  CA  SER    13      31.676  49.317  29.867  1.00 25.00           C
ATOM     14  CA  LEU    14      32.944  51.965  27.524  1.00 25.00           C
ATOM     15  CA  ILE    15      29.532  51.409  25.838  1.00 25.00           C
ATOM     16  CA  ASP    16      28.966  53.561  22.721  1.00 25.00           C
ATOM     17  CA  LYS    17      26.479  55.210  20.292  1.00 25.00           C
ATOM     18  CA  PRO    18      24.628  51.923  20.424  1.00 25.00           C
ATOM     19  CA  THR    19      21.364  50.384  19.138  1.00 25.00           C
ATOM     20  CA  ASN    20      22.762  46.868  19.728  1.00 25.00           C
ATOM     21  CA  LEU    21      23.785  47.844  23.287  1.00 25.00           C
ATOM     22  CA  GLY    22      20.279  49.240  23.939  1.00 25.00           C
ATOM     23  CA  GLY    23      18.718  45.995  22.632  1.00 25.00           C
ATOM     24  CA  LEU    24      21.012  43.944  24.912  1.00 25.00           C
ATOM     25  CA  CYS    25      20.021  46.118  27.905  1.00 25.00           C
ATOM     26  CA  ARG    26      16.317  45.631  27.063  1.00 25.00           C
ATOM     27  CA  THR    27      16.840  41.843  26.840  1.00 25.00           C
ATOM     28  CA  CYS    28      18.608  41.863  30.237  1.00 25.00           C
ATOM     29  CA  GLU    29      15.716  43.861  31.759  1.00 25.00           C
ATOM     30  CA  VAL    30      13.198  41.364  30.311  1.00 25.00           C
ATOM     31  CA  PHE    31      15.121  38.065  29.754  1.00 25.00           C
ATOM     32  CA  GLY    32      15.762  36.914  33.356  1.00 25.00           C
ATOM     33  CA  ALA    33      17.727  39.661  34.981  1.00 25.00           C
ATOM     34  CA  SER    34      17.543  43.223  36.423  1.00 25.00           C
ATOM     35  CA  VAL    35      20.251  45.890  36.528  1.00 25.00           C
ATOM     36  CA  LEU    36      22.325  46.807  33.473  1.00 25.00           C
ATOM     37  CA  VAL    37      25.581  48.553  34.089  1.00 25.00           C
ATOM     38  CA  VAL    38      26.217  51.345  31.615  1.00 25.00           C
ATOM     39  CA  GLY    39      29.287  53.614  31.291  1.00 25.00           C
ATOM     40  CA  SER    40      31.303  56.760  30.491  1.00 25.00           C
ATOM     41  CA  LEU    41      29.597  56.350  27.050  1.00 25.00           C
ATOM     42  CA  GLN    42      27.739  59.515  28.080  1.00 25.00           C
ATOM     43  CA  CYS    43      24.357  58.005  27.205  1.00 25.00           C
ATOM     44  CA  ILE    44      22.170  59.879  29.656  1.00 25.00           C
ATOM     45  CA  SER    45      20.239  62.510  27.673  1.00 25.00           C
ATOM     46  CA  ASP    46      21.113  61.183  24.233  1.00 25.00           C
ATOM     47  CA  LYS    47      17.877  59.192  24.641  1.00 25.00           C
ATOM     48  CA  GLN    48      18.375  56.397  22.071  1.00 25.00           C
ATOM     49  CA  PHE    49      19.190  53.925  24.881  1.00 25.00           C
ATOM     50  CA  GLN    50      16.035  54.995  26.769  1.00 25.00           C
ATOM     51  CA  HIS    51      13.943  54.511  23.599  1.00 25.00           C
ATOM     52  CA  LEU    52      15.451  51.026  23.106  1.00 25.00           C
ATOM     53  CA  SER    53      14.646  50.136  26.743  1.00 25.00           C
ATOM     54  CA  VAL    54      11.980  47.626  25.550  1.00 25.00           C
ATOM     55  CA  SER    55      10.602  48.289  29.072  1.00 25.00           C
ATOM     56  CA  ALA    56      12.279  51.083  31.053  1.00 25.00           C
ATOM     57  CA  GLU    57      14.011  52.324  34.235  1.00 25.00           C
ATOM     58  CA  GLN    58      11.499  50.393  36.387  1.00 25.00           C
ATOM     59  CA  TRP    59      12.073  47.144  34.416  1.00 25.00           C
ATOM     60  CA  LEU    60      15.776  47.705  35.083  1.00 25.00           C
ATOM     61  CA  PRO    61      17.774  49.407  32.320  1.00 25.00           C
ATOM     62  CA  LEU    62      19.568  50.797  35.337  1.00 25.00           C
ATOM     63  CA  VAL    63      22.873  52.223  36.433  1.00 25.00           C
ATOM     64  CA  GLU    64      25.407  54.758  35.202  1.00 25.00           C
ATOM     65  CA  VAL    65      28.865  54.028  36.518  1.00 25.00           C
ATOM     66  CA  LYS    66      32.156  55.877  35.794  1.00 25.00           C
ATOM     67  CA  PRO    67      32.042  56.835  39.509  1.00 25.00           C
ATOM     68  CA  PRO    68      35.803  56.319  39.268  1.00 25.00           C
ATOM     69  CA  GLN    69      37.479  53.430  37.391  1.00 25.00           C
ATOM     70  CA  LEU    70      34.728  51.105  38.637  1.00 25.00           C
ATOM     71  CA  ILE    71      36.994  49.745  41.409  1.00 25.00           C
ATOM     72  CA  ASP    72      34.684  51.250  44.068  1.00 25.00           C
ATOM     73  CA  TYR    73      31.646  49.652  42.369  1.00 25.00           C
ATOM     74  CA  LEU    74      33.436  46.267  42.297  1.00 25.00           C
ATOM     75  CA  GLN    75      34.278  46.605  46.017  1.00 25.00           C
ATOM     76  CA  GLN    76      30.621  47.438  46.794  1.00 25.00           C
ATOM     77  CA  LYS    77      29.475  44.375  44.800  1.00 25.00           C
ATOM     78  CA  LYS    78      31.955  42.171  46.713  1.00 25.00           C
ATOM     79  CA  THR    79      30.666  43.564  50.039  1.00 25.00           C
ATOM     80  CA  GLU    80      28.291  40.639  49.778  1.00 25.00           C
ATOM     81  CA  GLY    81      29.104  37.813  47.289  1.00 25.00           C
ATOM     82  CA  TYR    82      29.599  38.731  43.638  1.00 25.00           C
ATOM     83  CA  THR    83      27.286  41.041  41.683  1.00 25.00           C
ATOM     84  CA  ILE    84      27.560  41.600  37.879  1.00 25.00           C
ATOM     85  CA  ILE    85      28.535  39.703  34.721  1.00 25.00           C
ATOM     86  CA  GLY    86      32.160  38.813  34.085  1.00 25.00           C
ATOM     87  CA  VAL    87      32.267  38.850  30.298  1.00 25.00           C
ATOM     88  CA  GLU    88      33.520  39.829  26.855  1.00 25.00           C
ATOM     89  CA  GLN    89      32.845  37.660  23.832  1.00 25.00           C
ATOM     90  CA  THR    90      33.319  33.946  24.561  1.00 25.00           C
ATOM     91  CA  ALA    91      34.845  31.190  22.477  1.00 25.00           C
ATOM     92  CA  LYS    92      38.365  30.138  23.639  1.00 25.00           C
ATOM     93  CA  SER    93      39.166  31.790  26.955  1.00 25.00           C
ATOM     94  CA  LEU    94      38.218  28.452  28.603  1.00 25.00           C
ATOM     95  CA  ASP    95      34.478  29.011  27.911  1.00 25.00           C
ATOM     96  CA  LEU    96      31.773  30.887  29.751  1.00 25.00           C
ATOM     97  CA  THR    97      29.947  27.527  29.551  1.00 25.00           C
ATOM     98  CA  GLN    98      32.617  25.916  31.774  1.00 25.00           C
ATOM     99  CA  TYR    99      32.035  28.696  34.346  1.00 25.00           C
ATOM    100  CA  CYS   100      29.704  28.052  37.241  1.00 25.00           C
ATOM    101  CA  PHE   101      26.983  30.596  36.569  1.00 25.00           C
ATOM    102  CA  PRO   102      24.760  30.835  39.667  1.00 25.00           C
ATOM    103  CA  GLU   103      27.151  33.719  40.488  1.00 25.00           C
ATOM    104  CA  LYS   104      29.579  36.372  39.170  1.00 25.00           C
ATOM    105  CA  SER   105      31.986  39.322  39.181  1.00 25.00           C
ATOM    106  CA  LEU   106      32.462  42.658  37.383  1.00 25.00           C
ATOM    107  CA  LEU   107      30.304  44.455  34.732  1.00 25.00           C
ATOM    108  CA  LEU   108      32.189  43.803  31.474  1.00 25.00           C
ATOM    109  CA  LEU   109      33.128  45.192  28.039  1.00 25.00           C
ATOM    110  CA  GLY   110      31.683  45.835  24.580  1.00 25.00           C
ATOM    111  CA  ASN   111      32.844  49.028  22.870  1.00 25.00           C
ATOM    112  CA  GLU   112      33.029  47.307  19.516  1.00 25.00           C
ATOM    113  CA  ARG   113      36.555  48.610  19.545  1.00 25.00           C
ATOM    114  CA  GLU   114      39.224  46.682  21.544  1.00 25.00           C
ATOM    115  CA  GLY   115      36.886  46.426  24.479  1.00 25.00           C
ATOM    116  CA  ILE   116      38.120  45.502  27.952  1.00 25.00           C
ATOM    117  CA  PRO   117      40.282  48.382  29.223  1.00 25.00           C
ATOM    118  CA  ALA   118      43.149  46.444  30.630  1.00 25.00           C
ATOM    119  CA  ASN   119      42.122  47.331  34.211  1.00 25.00           C
ATOM    120  CA  LEU   120      38.584  46.025  33.546  1.00 25.00           C
ATOM    121  CA  ILE   121      40.025  42.768  32.136  1.00 25.00           C
ATOM    122  CA  GLN   122      42.247  42.383  35.232  1.00 25.00           C
ATOM    123  CA  GLN   123      39.219  42.950  37.506  1.00 25.00           C
ATOM    124  CA  LEU   124      37.182  40.006  36.298  1.00 25.00           C
ATOM    125  CA  ASP   125      38.317  36.765  37.882  1.00 25.00           C
ATOM    126  CA  VAL   126      38.286  35.449  34.279  1.00 25.00           C
ATOM    127  CA  CYS   127      37.331  37.872  31.522  1.00 25.00           C
ATOM    128  CA  VAL   128      35.970  35.748  28.676  1.00 25.00           C
ATOM    129  CA  GLU   129      38.006  36.979  25.778  1.00 25.00           C
ATOM    130  CA  ILE   130      37.327  36.035  22.207  1.00 25.00           C
ATOM    131  CA  PRO   131      36.408  34.369  18.915  1.00 25.00           C
ATOM    132  CA  GLN   132      34.596  31.895  16.669  1.00 25.00           C
ATOM    133  CA  GLN   133      36.552  30.159  13.893  1.00 25.00           C
ATOM    134  CA  GLY   134      35.225  30.665  10.425  1.00 25.00           C
ATOM    135  CA  ILE   135      34.783  34.371   9.737  1.00 25.00           C
ATOM    136  CA  ILE   136      36.891  35.880  12.571  1.00 25.00           C
ATOM    137  CA  ARG   137      34.182  38.605  12.371  1.00 25.00           C
ATOM    138  CA  SER   138      33.327  39.127  16.040  1.00 25.00           C
ATOM    139  CA  LEU   139      30.009  40.702  17.017  1.00 25.00           C
ATOM    140  CA  ASN   140      27.709  43.662  17.459  1.00 25.00           C
ATOM    141  CA  VAL   141      28.084  43.303  21.219  1.00 25.00           C
ATOM    142  CA  HIS   142      24.282  42.878  21.399  1.00 25.00           C
ATOM    143  CA  VAL   143      24.552  39.487  19.640  1.00 25.00           C
ATOM    144  CA  SER   144      27.268  38.395  22.110  1.00 25.00           C
ATOM    145  CA  GLY   145      25.062  39.472  25.050  1.00 25.00           C
ATOM    146  CA  ALA   146      22.119  37.496  23.597  1.00 25.00           C
ATOM    147  CA  LEU   147      24.355  34.412  23.202  1.00 25.00           C
ATOM    148  CA  LEU   148      25.528  34.765  26.830  1.00 25.00           C
ATOM    149  CA  ILE   149      21.893  35.034  28.005  1.00 25.00           C
ATOM    150  CA  TRP   150      20.990  31.893  26.007  1.00 25.00           C
ATOM    151  CA  GLU   151      23.946  30.023  27.565  1.00 25.00           C
ATOM    152  CA  TYR   152      22.830  31.120  31.061  1.00 25.00           C
ATOM    153  CA  THR   153      19.269  29.916  30.328  1.00 25.00           C
ATOM    154  CA  ARG   154      20.629  26.544  29.126  1.00 25.00           C
ATOM    155  CA  GLN   155      22.725  26.224  32.314  1.00 25.00           C
ATOM    156  CA  GLN   156      19.645  27.014  34.448  1.00 25.00           C
ATOM    157  CA  LEU   157      18.218  23.959  32.689  1.00 25.00           C
ATOM    158  CA  LEU   158      20.379  21.106  33.937  1.00 25.00           C
ATOM    159  CA  SER   159      22.473  21.633  37.035  1.00 25.00           C
TER
END
