
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   35 (  140),  selected   35 , name T0346AL242_3
# Molecule2: number of CA atoms  172 ( 1335),  selected   35 , name T0346.pdb
# PARAMETERS: T0346AL242_3.T0346.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    20        28 - 47          4.90    10.31
  LONGEST_CONTINUOUS_SEGMENT:    20        29 - 48          4.74    10.34
  LONGEST_CONTINUOUS_SEGMENT:    20        30 - 49          4.73    10.64
  LCS_AVERAGE:     10.88

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:     8        46 - 53          1.83    17.66
  LCS_AVERAGE:      3.79

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:     5        24 - 28          0.86    20.97
  LONGEST_CONTINUOUS_SEGMENT:     5        31 - 35          0.39    15.40
  LONGEST_CONTINUOUS_SEGMENT:     5        44 - 48          0.80    22.42
  LONGEST_CONTINUOUS_SEGMENT:     5        50 - 54          0.96    19.04
  LCS_AVERAGE:      2.64

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  172
LCS_GDT     Q      21     Q      21      4    5   16     0    6    6    7    7    8    9   10   11   13   13   14   17   18   21   23   24   24   25   27 
LCS_GDT     L      22     L      22      4    6   16     3    3    4    7    7    8    9   10   12   13   13   14   16   18   21   23   24   24   25   27 
LCS_GDT     F      23     F      23      4    6   16     3    3    4    6    6    7    8    9   12   13   13   14   16   17   18   19   21   23   25   27 
LCS_GDT     S      24     S      24      5    7   16     4    4    5    6    7    8    9    9   12   13   13   14   16   17   18   18   20   21   23   25 
LCS_GDT     D      25     D      25      5    7   16     4    4    5    6    8    8    9    9   12   13   13   13   14   15   16   18   18   18   20   21 
LCS_GDT     I      26     I      26      5    7   16     4    4    5    6    8    8    9    9   12   13   13   13   14   15   16   18   18   18   20   21 
LCS_GDT     C      27     C      27      5    7   16     4    4    5    6    8    8    9    9   12   13   13   14   15   17   20   22   24   24   25   27 
LCS_GDT     P      28     P      28      5    7   20     4    4    5    6    8    8    9   11   12   13   13   16   18   19   21   23   24   24   25   27 
LCS_GDT     K      29     K      29      4    7   20     4    4    5    5    8    8    9   11   12   12   15   18   18   19   21   23   24   24   25   27 
LCS_GDT     T      30     T      30      4    7   20     4    4    5    7    8    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     C      31     C      31      5    7   20     4    6    6    7    8    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     K      32     K      32      5    5   20     4    6    6    7    7    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     N      33     N      33      5    5   20     4    6    6    7    7    8    9   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     F      34     F      34      5    5   20     4    6    6    7    7    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     L      35     L      35      5    5   20     4    6    6    7    8    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     C      36     C      36      4    5   20     4    4    5    5    7    7   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     L      37     L      37      4    5   20     4    4    5    7    7    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     C      38     C      38      4    6   20     4    4    5    5    7    8    9   11   12   14   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     S      39     S      39      4    6   20     4    4    5    5    7    7   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     G      40     G      40      4    6   20     3    3    4    5    7    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     E      41     E      41      4    6   20     3    4    4    5    7    8    9   11   11   12   13   16   19   20   21   23   24   24   25   27 
LCS_GDT     K      42     K      42      4    7   20     3    4    6    7    7    7    7   10   11   12   14   17   19   20   21   23   24   24   25   27 
LCS_GDT     G      43     G      43      4    7   20     3    4    4    7    7    7    9   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     L      44     L      44      5    7   20     4    4    6    7    7    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     G      45     G      45      5    7   20     4    4    6    7    7    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     K      46     K      46      5    8   20     4    4    6    7    7    7   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     T      47     T      47      5    8   20     4    4    6    7    7    8   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     T      48     T      48      5    8   20     3    4    6    7    7    7   10   12   14   15   16   18   19   20   21   23   24   24   25   27 
LCS_GDT     G      49     G      49      4    8   20     3    4    5    6    7    7   10   11   12   12   14   15   17   20   20   21   22   23   25   27 
LCS_GDT     K      50     K      50      5    8   18     3    4    5    6    7    7   10   11   12   12   14   15   16   18   18   20   22   23   24   27 
LCS_GDT     K      51     K      51      5    8   17     3    4    5    6    7    7   10   11   12   12   14   15   17   18   19   21   22   23   25   27 
LCS_GDT     L      52     L      52      5    8   17     3    4    4    6    7    7    9    9   11   12   14   15   17   18   19   21   22   23   25   27 
LCS_GDT     C      53     C      53      5    8   17     3    4    4    6    7    7   10   11   12   12   14   15   17   18   18   21   21   23   25   26 
LCS_GDT     Y      54     Y      54      5    6   17     3    3    4    6    6    6    9   11   12   12   14   15   17   18   18   21   21   21   22   23 
LCS_GDT     K      55     K      55      3    3   17     3    3    3    3    4    6   10   11   12   12   14   15   17   18   18   19   20   21   22   23 
LCS_AVERAGE  LCS_A:   5.77  (   2.64    3.79   10.88 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      4      6      6      7      8      8     10     12     14     15     16     18     19     20     21     23     24     24     25     27 
GDT PERCENT_CA   2.33   3.49   3.49   4.07   4.65   4.65   5.81   6.98   8.14   8.72   9.30  10.47  11.05  11.63  12.21  13.37  13.95  13.95  14.53  15.70
GDT RMS_LOCAL    0.05   0.60   0.60   0.98   1.84   1.66   2.64   2.92   3.22   3.46   3.62   4.16   4.44   4.73   5.06   8.77   5.92   5.92   6.23   6.61
GDT RMS_ALL_CA  14.47  15.64  15.64  16.16  20.47  14.19  10.45  10.59  10.64  10.39  10.51  10.25  10.50  10.64  10.16   9.75   9.82   9.82   9.81   9.79

#      Molecule1      Molecule2       DISTANCE
LGA    Q      21      Q      21         14.687
LGA    L      22      L      22         13.850
LGA    F      23      F      23         16.095
LGA    S      24      S      24         17.090
LGA    D      25      D      25         22.205
LGA    I      26      I      26         19.601
LGA    C      27      C      27         12.174
LGA    P      28      P      28         10.289
LGA    K      29      K      29          7.742
LGA    T      30      T      30          1.418
LGA    C      31      C      31          3.799
LGA    K      32      K      32          2.509
LGA    N      33      N      33          4.193
LGA    F      34      F      34          1.954
LGA    L      35      L      35          3.790
LGA    C      36      C      36          3.781
LGA    L      37      L      37          3.442
LGA    C      38      C      38          6.968
LGA    S      39      S      39          6.372
LGA    G      40      G      40          3.899
LGA    E      41      E      41          9.574
LGA    K      42      K      42          8.868
LGA    G      43      G      43          4.574
LGA    L      44      L      44          2.110
LGA    G      45      G      45          1.847
LGA    K      46      K      46          3.809
LGA    T      47      T      47          1.399
LGA    T      48      T      48          7.010
LGA    G      49      G      49         10.541
LGA    K      50      K      50         13.022
LGA    K      51      K      51         11.234
LGA    L      52      L      52         11.288
LGA    C      53      C      53         12.149
LGA    Y      54      Y      54         15.196
LGA    K      55      K      55         21.142

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   35  172    4.0     12    2.92     6.977     6.085     0.397

LGA_LOCAL      RMSD =  2.923  Number of atoms =   12  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 10.641  Number of atoms =   35 
Std_ALL_ATOMS  RMSD =  9.323  (standard rmsd on all 35 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.130305 * X  +   0.770798 * Y  +   0.623611 * Z  +  43.071331
  Y_new =  -0.685834 * X  +  -0.524291 * Y  +   0.504729 * Z  +  -9.328325
  Z_new =   0.715997 * X  +  -0.361925 * Y  +   0.596957 * Z  +  36.408375 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.545027    2.596566  [ DEG:   -31.2277    148.7723 ]
  Theta =  -0.798052   -2.343541  [ DEG:   -45.7250   -134.2750 ]
  Phi   =  -1.758554    1.383039  [ DEG:  -100.7577     79.2423 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0346AL242_3                                  
REMARK     2: T0346.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0346AL242_3.T0346.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   35  172   4.0   12   2.92   6.085     9.32
REMARK  ---------------------------------------------------------- 
MOLECULE T0346AL242_3
REMARK Aligment from pdb entry: 1ji9_A
ATOM      1  N   GLN    21      50.661  -1.200  35.287  1.00  0.00              
ATOM      2  CA  GLN    21      51.387  -2.448  35.662  1.00  0.00              
ATOM      3  C   GLN    21      50.523  -3.676  35.365  1.00  0.00              
ATOM      4  O   GLN    21      49.324  -3.576  35.197  1.00  0.00              
ATOM      5  N   LEU    22      51.121  -4.836  35.304  1.00  0.00              
ATOM      6  CA  LEU    22      50.329  -6.068  35.022  1.00  0.00              
ATOM      7  C   LEU    22      49.181  -6.191  36.021  1.00  0.00              
ATOM      8  O   LEU    22      48.209  -6.878  35.785  1.00  0.00              
ATOM      9  N   PHE    23      49.302  -5.520  37.128  1.00  0.00              
ATOM     10  CA  PHE    23      48.237  -5.557  38.181  1.00  0.00              
ATOM     11  C   PHE    23      47.581  -6.930  38.275  1.00  0.00              
ATOM     12  O   PHE    23      46.439  -7.020  38.663  1.00  0.00              
ATOM     13  N   SER    24      48.247  -7.995  37.908  1.00  0.00              
ATOM     14  CA  SER    24      47.548  -9.311  37.970  1.00  0.00              
ATOM     15  C   SER    24      48.432 -10.493  37.606  1.00  0.00              
ATOM     16  O   SER    24      49.417 -10.381  36.904  1.00  0.00              
ATOM     17  N   ASP    25      47.999 -11.643  38.026  1.00  0.00              
ATOM     18  CA  ASP    25      48.688 -12.900  37.671  1.00  0.00              
ATOM     19  C   ASP    25      47.875 -13.538  36.542  1.00  0.00              
ATOM     20  O   ASP    25      48.319 -14.440  35.861  1.00  0.00              
ATOM     21  N   ILE    26      46.677 -13.030  36.331  1.00  0.00              
ATOM     22  CA  ILE    26      45.813 -13.560  35.228  1.00  0.00              
ATOM     23  C   ILE    26      45.768 -12.566  34.067  1.00  0.00              
ATOM     24  O   ILE    26      45.138 -12.794  33.052  1.00  0.00              
ATOM     25  N   CYS    27      46.426 -11.461  34.228  1.00  0.00              
ATOM     26  CA  CYS    27      46.448 -10.416  33.189  1.00  0.00              
ATOM     27  C   CYS    27      47.825  -9.771  33.074  1.00  0.00              
ATOM     28  O   CYS    27      48.593  -9.764  34.016  1.00  0.00              
ATOM     29  N   PRO    28      48.070  -9.218  31.922  1.00  0.00              
ATOM     30  CA  PRO    28      49.333  -8.520  31.663  1.00  0.00              
ATOM     31  C   PRO    28      49.144  -7.040  31.999  1.00  0.00              
ATOM     32  O   PRO    28      48.124  -6.647  32.529  1.00  0.00              
ATOM     33  N   LYS    29      50.095  -6.214  31.689  1.00  0.00              
ATOM     34  CA  LYS    29      49.928  -4.765  31.989  1.00  0.00              
ATOM     35  C   LYS    29      49.125  -4.093  30.876  1.00  0.00              
ATOM     36  O   LYS    29      48.929  -2.894  30.871  1.00  0.00              
ATOM     37  N   THR    30      48.673  -4.858  29.923  1.00  0.00              
ATOM     38  CA  THR    30      47.897  -4.267  28.799  1.00  0.00              
ATOM     39  C   THR    30      46.411  -4.628  28.915  1.00  0.00              
ATOM     40  O   THR    30      45.591  -4.114  28.180  1.00  0.00              
ATOM     41  N   CYS    31      46.041  -5.499  29.819  1.00  0.00              
ATOM     42  CA  CYS    31      44.615  -5.857  29.941  1.00  0.00              
ATOM     43  C   CYS    31      43.757  -4.606  29.995  1.00  0.00              
ATOM     44  O   CYS    31      43.720  -3.914  30.992  1.00  0.00              
ATOM     45  N   LYS    32      43.043  -4.316  28.954  1.00  0.00              
ATOM     46  CA  LYS    32      42.177  -3.120  29.001  1.00  0.00              
ATOM     47  C   LYS    32      40.958  -3.430  29.851  1.00  0.00              
ATOM     48  O   LYS    32      40.173  -2.570  30.197  1.00  0.00              
ATOM     49  N   ASN    33      40.843  -4.653  30.235  1.00  0.00              
ATOM     50  CA  ASN    33      39.741  -5.058  31.123  1.00  0.00              
ATOM     51  C   ASN    33      40.067  -4.532  32.489  1.00  0.00              
ATOM     52  O   ASN    33      39.226  -4.287  33.321  1.00  0.00              
ATOM     53  N   PHE    34      41.321  -4.375  32.697  1.00  0.00              
ATOM     54  CA  PHE    34      41.818  -3.886  34.001  1.00  0.00              
ATOM     55  C   PHE    34      42.251  -2.445  33.865  1.00  0.00              
ATOM     56  O   PHE    34      42.624  -1.784  34.813  1.00  0.00              
ATOM     57  N   LEU    35      42.208  -1.974  32.670  1.00  0.00              
ATOM     58  CA  LEU    35      42.612  -0.596  32.379  1.00  0.00              
ATOM     59  C   LEU    35      41.670   0.407  33.048  1.00  0.00              
ATOM     60  O   LEU    35      41.904   1.600  33.031  1.00  0.00              
ATOM     61  N   CYS    36      41.289  -2.606  37.315  1.00  0.00              
ATOM     62  CA  CYS    36      41.489  -4.058  37.591  1.00  0.00              
ATOM     63  C   CYS    36      40.128  -4.722  37.808  1.00  0.00              
ATOM     64  O   CYS    36      39.633  -4.810  38.914  1.00  0.00              
ATOM     65  N   LEU    37      39.515  -5.168  36.748  1.00  0.00              
ATOM     66  CA  LEU    37      38.179  -5.805  36.860  1.00  0.00              
ATOM     67  C   LEU    37      38.222  -7.015  37.795  1.00  0.00              
ATOM     68  O   LEU    37      37.213  -7.418  38.339  1.00  0.00              
ATOM     69  N   CYS    38      39.371  -7.593  38.003  1.00  0.00              
ATOM     70  CA  CYS    38      39.432  -8.766  38.927  1.00  0.00              
ATOM     71  C   CYS    38      39.973  -8.336  40.293  1.00  0.00              
ATOM     72  O   CYS    38      40.326  -9.159  41.114  1.00  0.00              
ATOM     73  N   SER    39      40.040  -7.058  40.548  1.00  0.00              
ATOM     74  CA  SER    39      40.555  -6.586  41.863  1.00  0.00              
ATOM     75  C   SER    39      39.997  -7.440  42.996  1.00  0.00              
ATOM     76  O   SER    39      40.642  -7.667  44.000  1.00  0.00              
ATOM     77  N   GLY    40      38.803  -7.906  42.836  1.00  0.00              
ATOM     78  CA  GLY    40      38.177  -8.747  43.894  1.00  0.00              
ATOM     79  C   GLY    40      39.054  -9.969  44.164  1.00  0.00              
ATOM     80  O   GLY    40      39.069 -10.914  43.399  1.00  0.00              
ATOM     81  N   GLU    41      39.783  -9.965  45.247  1.00  0.00              
ATOM     82  CA  GLU    41      40.651 -11.134  45.559  1.00  0.00              
ATOM     83  C   GLU    41      39.850 -12.188  46.319  1.00  0.00              
ATOM     84  O   GLU    41      40.291 -12.737  47.309  1.00  0.00              
ATOM     85  N   LYS    42      38.672 -12.471  45.849  1.00  0.00              
ATOM     86  CA  LYS    42      37.813 -13.486  46.509  1.00  0.00              
ATOM     87  C   LYS    42      38.005 -14.843  45.829  1.00  0.00              
ATOM     88  O   LYS    42      38.964 -15.545  46.082  1.00  0.00              
ATOM     89  N   GLY    43      37.114 -15.208  44.953  1.00  0.00              
ATOM     90  CA  GLY    43      37.255 -16.505  44.240  1.00  0.00              
ATOM     91  C   GLY    43      37.966 -16.261  42.909  1.00  0.00              
ATOM     92  O   GLY    43      38.288 -17.182  42.184  1.00  0.00              
ATOM     93  N   LEU    44      38.210 -15.018  42.581  1.00  0.00              
ATOM     94  CA  LEU    44      38.892 -14.697  41.303  1.00  0.00              
ATOM     95  C   LEU    44      40.403 -14.699  41.485  1.00  0.00              
ATOM     96  O   LEU    44      41.117 -13.869  40.957  1.00  0.00              
ATOM     97  N   GLY    45      40.874 -15.628  42.234  1.00  0.00              
ATOM     98  CA  GLY    45      42.330 -15.742  42.499  1.00  0.00              
ATOM     99  C   GLY    45      43.143 -15.423  41.239  1.00  0.00              
ATOM    100  O   GLY    45      42.861 -15.917  40.164  1.00  0.00              
ATOM    101  N   LYS    46      44.151 -14.603  41.368  1.00  0.00              
ATOM    102  CA  LYS    46      44.988 -14.254  40.183  1.00  0.00              
ATOM    103  C   LYS    46      46.069 -15.308  39.984  1.00  0.00              
ATOM    104  O   LYS    46      46.438 -15.644  38.876  1.00  0.00              
ATOM    105  N   THR    47      46.562 -15.837  41.061  1.00  0.00              
ATOM    106  CA  THR    47      47.610 -16.889  40.986  1.00  0.00              
ATOM    107  C   THR    47      47.286 -17.840  39.859  1.00  0.00              
ATOM    108  O   THR    47      48.144 -18.362  39.178  1.00  0.00              
ATOM    109  N   THR    48      46.032 -18.032  39.663  1.00  0.00              
ATOM    110  CA  THR    48      45.546 -18.918  38.570  1.00  0.00              
ATOM    111  C   THR    48      46.410 -18.749  37.319  1.00  0.00              
ATOM    112  O   THR    48      46.484 -19.632  36.494  1.00  0.00              
ATOM    113  N   GLY    49      47.021 -17.589  37.185  1.00  0.00              
ATOM    114  CA  GLY    49      47.875 -17.239  36.011  1.00  0.00              
ATOM    115  C   GLY    49      47.020 -16.602  34.936  1.00  0.00              
ATOM    116  O   GLY    49      47.496 -15.893  34.072  1.00  0.00              
ATOM    117  N   LYS    50      45.759 -16.848  35.002  1.00  0.00              
ATOM    118  CA  LYS    50      44.818 -16.276  34.030  1.00  0.00              
ATOM    119  C   LYS    50      43.418 -16.272  34.636  1.00  0.00              
ATOM    120  O   LYS    50      43.112 -17.043  35.522  1.00  0.00              
ATOM    121  N   LYS    51      42.576 -15.405  34.184  1.00  0.00              
ATOM    122  CA  LYS    51      41.191 -15.363  34.752  1.00  0.00              
ATOM    123  C   LYS    51      40.140 -15.655  33.682  1.00  0.00              
ATOM    124  O   LYS    51      40.441 -16.144  32.612  1.00  0.00              
ATOM    125  N   LEU    52      38.899 -15.372  33.980  1.00  0.00              
ATOM    126  CA  LEU    52      37.811 -15.647  33.004  1.00  0.00              
ATOM    127  C   LEU    52      36.873 -14.442  32.881  1.00  0.00              
ATOM    128  O   LEU    52      35.748 -14.567  32.443  1.00  0.00              
ATOM    129  N   CYS    53      37.324 -13.274  33.249  1.00  0.00              
ATOM    130  CA  CYS    53      36.433 -12.073  33.127  1.00  0.00              
ATOM    131  C   CYS    53      36.894 -11.203  31.972  1.00  0.00              
ATOM    132  O   CYS    53      36.112 -10.703  31.186  1.00  0.00              
ATOM    133  N   TYR    54      38.162 -11.020  31.883  1.00  0.00              
ATOM    134  CA  TYR    54      38.741 -10.185  30.808  1.00  0.00              
ATOM    135  C   TYR    54      38.784 -10.960  29.502  1.00  0.00              
ATOM    136  O   TYR    54      38.503 -10.445  28.437  1.00  0.00              
ATOM    137  N   LYS    55      39.144 -12.195  29.595  1.00  0.00              
ATOM    138  CA  LYS    55      39.233 -13.064  28.390  1.00  0.00              
ATOM    139  C   LYS    55      38.103 -12.740  27.408  1.00  0.00              
ATOM    140  O   LYS    55      38.342 -11.964  26.498  1.00  0.00              
END
