
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   78 (  312),  selected   78 , name T0367AL333_5-D1
# Molecule2: number of CA atoms  123 (  996),  selected   78 , name T0367_D1.pdb
# PARAMETERS: T0367AL333_5-D1.T0367_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    22        61 - 85          5.00    15.67
  LCS_AVERAGE:     15.58

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    15         2 - 16          1.59    27.91
  LCS_AVERAGE:      7.71

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    14         2 - 15          0.78    28.48
  LCS_AVERAGE:      6.44

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  123
LCS_GDT     M       1     M       1      3    3   20     0    3   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     D       2     D       2     14   15   20     3    5   13   14   14   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     E       3     E       3     14   15   20    12   13   13   14   14   14   17   19   21   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     L       4     L       4     14   15   20     3   13   13   14   14   14   15   18   21   23   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     E       5     E       5     14   15   20    12   13   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     L       6     L       6     14   15   20    12   13   13   14   14   15   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     R       7     R       7     14   15   20    12   13   13   14   14   14   17   20   22   26   28   29   32   36   39   42   45   46   48   49 
LCS_GDT     I       8     I       8     14   15   20    12   13   13   14   14   14   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     R       9     R       9     14   15   20    12   13   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     K      10     K      10     14   15   20    12   13   13   14   14   14   17   20   25   26   30   31   32   33   38   42   45   46   48   49 
LCS_GDT     A      11     A      11     14   15   20    12   13   13   14   14   14   17   20   23   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     E      12     E      12     14   15   20    12   13   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     K      13     K      13     14   15   20    12   13   13   14   14   15   17   20   25   26   30   31   32   32   34   37   41   45   47   49 
LCS_GDT     L      14     L      14     14   15   20    12   13   13   14   14   14   17   19   25   26   30   31   32   32   34   37   39   45   46   49 
LCS_GDT     V      15     V      15     14   15   20    12   13   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     Q      16     Q      16      9   15   20     7    9   10   10   11   13   15   15   15   17   23   25   26   30   31   34   36   40   44   46 
LCS_GDT     D      17     D      17      9   10   20     5    9   10   10   11   11   11   13   15   17   20   24   26   27   31   33   36   37   37   38 
LCS_GDT     A      18     A      18      9   10   20     7    9   10   10   11   11   11   13   15   17   20   24   26   30   30   34   36   37   37   43 
LCS_GDT     K      19     K      19      9   10   20     7    9   10   10   11   11   11   13   15   17   20   24   26   27   30   33   36   37   37   40 
LCS_GDT     K      20     K      20      9   10   20     7    9   10   10   11   11   11   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     E      21     E      21      9   10   15     7    9   10   10   11   11   11   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     F      22     F      22      9   10   15     7    9   10   10   11   11   11   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     E      23     E      23      9   10   15     7    9   10   10   11   11   11   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     M      24     M      24      9   10   15     6    9   10   10   11   11   11   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     L      47     L      47      4    4   19     4    4    4    4    6   13   15   17   23   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     G      48     G      48      4    6   19     4    4    4    4   10   13   17   20   23   26   28   31   32   36   39   42   45   46   48   49 
LCS_GDT     Y      49     Y      49      4    6   19     4    8   10   12   13   14   17   20   23   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     G      50     G      50      4    6   19     4    4    4    7   11   14   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     R      51     R      51      3    9   19     3    4   10   12   13   14   17   20   23   26   30   31   32   34   39   42   45   46   48   49 
LCS_GDT     D      52     D      52      4    9   19     3    3    4    7   11   13   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     S      53     S      53      4   12   19     3    3    4    7    8   12   16   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     K      54     K      54     11   12   19     5   10   11   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     T      55     T      55     11   12   19     8   10   13   14   15   16   17   20   25   26   30   31   32   35   39   42   45   46   48   49 
LCS_GDT     H      56     H      56     11   12   19     8   10   13   14   15   16   17   20   25   26   30   31   32   32   36   41   45   46   48   49 
LCS_GDT     R      57     R      57     11   12   19     8   10   13   14   15   16   17   20   25   26   30   31   32   34   39   42   45   46   48   49 
LCS_GDT     G      58     G      58     11   12   19     8   10   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     T      59     T      59     11   12   19     8   10   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     I      60     I      60     11   12   19     8   10   13   14   15   16   17   20   25   26   30   31   32   35   39   42   45   46   48   49 
LCS_GDT     Y      61     Y      61     11   12   22     8   10   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     L      62     L      62     11   12   22     8   10   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     I      63     I      63     11   12   22     8   10   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     W      64     W      64     11   12   22     4    8   13   14   15   16   17   20   25   26   30   31   32   36   39   42   45   46   48   49 
LCS_GDT     E      68     E      68      3    3   22     3    3    3    5    8   10   13   19   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     E      69     E      69      3    3   22     3    3    3    4    7   10   12   15   16   18   19   20   23   28   33   37   39   45   48   49 
LCS_GDT     L      70     L      70      3    4   22     3    3    3    4    8    9   12   13   15   16   17   20   23   23   26   37   37   38   41   45 
LCS_GDT     G      71     G      71      3    4   22     3    3    3    5    6    6   12   13   15   16   19   20   23   23   26   37   37   38   40   44 
LCS_GDT     L      72     L      72      3    9   22     3    3    4    6    8   10   12   16   21   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     S      73     S      73      8    9   22     7    8   10   12   13   14   17   20   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     D      74     D      74      8    9   22     7    8   10   12   13   14   17   20   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     D      75     D      75      8    9   22     7    8   10   12   13   14   17   20   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     D      76     D      76      8    9   22     7    8   10   12   13   14   17   20   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     C      77     C      77      8    9   22     7    8   10   12   13   14   17   20   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     S      78     S      78      8    9   22     7    8   10   12   13   14   17   20   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     K      79     K      79      8    9   22     7    8   10   12   13   14   17   20   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     L      80     L      80      8    9   22     6    8   10   12   13   14   17   20   23   26   28   29   31   36   39   42   45   46   48   49 
LCS_GDT     S      81     S      81      3    9   22     3    3    3    4    5   10   11   12   12   18   22   23   26   30   31   37   37   40   42   42 
LCS_GDT     R      82     R      82      4    6   22     3    4    4    6    8   10   12   13   15   18   20   24   26   27   30   37   37   40   44   47 
LCS_GDT     A      83     A      83      4    6   22     3    4    5    6    8   10   12   15   16   18   19   24   26   27   30   37   38   42   48   49 
LCS_GDT     F      84     F      84      4    6   22     3    4    5    6    8   10   12   15   16   18   19   20   29   33   39   42   45   46   48   49 
LCS_GDT     D      85     D      85      4    6   22     1    3    5    6    6   10   11   15   16   18   20   22   26   31   35   38   43   46   48   49 
LCS_GDT     L      86     L      86      3    3   19     1    3    3    4    6    8   10   13   17   18   20   24   27   34   39   42   45   46   48   49 
LCS_GDT     R      87     R      87      3    3   16     3    3    4    5    6   10   12   16   17   18   20   23   29   35   39   42   45   46   48   49 
LCS_GDT     E      88     E      88      3    4   16     3    3    3    6    9   10   13   16   17   18   20   23   29   36   39   42   45   46   48   49 
LCS_GDT     E      89     E      89      3    6   16     0    3    5    5    6    6   12   16   17   18   20   22   27   31   35   40   41   44   45   48 
LCS_GDT     S      90     S      90      5    6   16     0    4    5    5    6    6    6    6    8    9   12   14   16   23   32   33   37   40   43   46 
LCS_GDT     Y      92     Y      92      5    6   16     3    4    5    5    6    6    6    9   11   13   15   21   24   26   30   36   38   41   43   46 
LCS_GDT     G      93     G      93      5    6   16     3    4    5    5    6    6    7   11   15   17   20   24   26   27   30   33   37   41   43   46 
LCS_GDT     I      94     I      94      5    8   16     3    4    5    5    6    9   10   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     Y      95     Y      95      6    8   16     3    6    6    7    8    9   10   11   11   13   19   24   26   27   30   33   36   37   37   38 
LCS_GDT     K      96     K      96      6    8   16     3    6    6    7    8    9   10   11   11   13   15   24   26   27   30   33   36   37   37   38 
LCS_GDT     E      97     E      97      6    8   16     3    6    6    7    8    9   10   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     V      98     V      98      6    8   16     3    6    6    7    8    9   10   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     S      99     S      99      6    8   16     5    8   10   10   11   11   11   11   12   17   20   22   26   27   30   33   36   37   37   38 
LCS_GDT     K     100     K     100      6    8   16     5    6    6    7   11   11   11   11   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     D     101     D     101      6    8   16     5    6    6    7    8    9   10   13   15   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     L     102     L     102      6    8   16     5    6    6    7    8    9   10   11   11   17   20   24   26   27   30   33   36   37   37   38 
LCS_GDT     A     103     A     103      6    7   13     5    6    6    6    8    9   10   11   13   14   16   19   21   26   30   33   36   37   37   38 
LCS_GDT     I     104     I     104      6    7   13     3    6    6    6    8    9   10   11   11   11   13   17   19   23   30   33   36   37   37   38 
LCS_AVERAGE  LCS_A:   9.91  (   6.44    7.71   15.58 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     12     13     13     14     15     16     17     20     25     26     30     31     32     36     39     42     45     46     48     49 
GDT PERCENT_CA   9.76  10.57  10.57  11.38  12.20  13.01  13.82  16.26  20.33  21.14  24.39  25.20  26.02  29.27  31.71  34.15  36.59  37.40  39.02  39.84
GDT RMS_LOCAL    0.28   0.35   0.35   0.78   1.30   1.46   1.72   2.66   3.25   3.44   3.77   3.87   3.97   5.59   5.75   5.96   6.18   6.26   6.51   6.68
GDT RMS_ALL_CA  28.43  28.51  28.51  28.48  15.80  15.70  15.58  16.35  16.41  15.87  16.68  16.78  16.77  14.09  14.13  13.90  13.75  13.68  13.63  13.56

#      Molecule1      Molecule2       DISTANCE
LGA    M       1      M       1          3.501
LGA    D       2      D       2          3.803
LGA    E       3      E       3          7.781
LGA    L       4      L       4          6.333
LGA    E       5      E       5          2.360
LGA    L       6      L       6          3.282
LGA    R       7      R       7          6.848
LGA    I       8      I       8          5.772
LGA    R       9      R       9          2.467
LGA    K      10      K      10          3.767
LGA    A      11      A      11          7.001
LGA    E      12      E      12          5.697
LGA    K      13      K      13          1.986
LGA    L      14      L      14          4.512
LGA    V      15      V      15          6.777
LGA    Q      16      Q      16          7.577
LGA    D      17      D      17         11.313
LGA    A      18      A      18          9.465
LGA    K      19      K      19         13.344
LGA    K      20      K      20         18.497
LGA    E      21      E      21         19.353
LGA    F      22      F      22         21.057
LGA    E      23      E      23         25.788
LGA    M      24      M      24         29.907
LGA    L      47      L      47          5.511
LGA    G      48      G      48          6.643
LGA    Y      49      Y      49          5.180
LGA    G      50      G      50          4.410
LGA    R      51      R      51          5.621
LGA    D      52      D      52          3.650
LGA    S      53      S      53          3.525
LGA    K      54      K      54          2.877
LGA    T      55      T      55          2.371
LGA    H      56      H      56          2.336
LGA    R      57      R      57          2.554
LGA    G      58      G      58          2.411
LGA    T      59      T      59          1.317
LGA    I      60      I      60          1.368
LGA    Y      61      Y      61          1.542
LGA    L      62      L      62          2.575
LGA    I      63      I      63          2.267
LGA    W      64      W      64          3.746
LGA    E      68      E      68         14.264
LGA    E      69      E      69         19.714
LGA    L      70      L      70         18.427
LGA    G      71      G      71         22.289
LGA    L      72      L      72         16.920
LGA    S      73      S      73         16.311
LGA    D      74      D      74         18.381
LGA    D      75      D      75         17.748
LGA    D      76      D      76         14.717
LGA    C      77      C      77         15.236
LGA    S      78      S      78         18.236
LGA    K      79      K      79         16.071
LGA    L      80      L      80         13.960
LGA    S      81      S      81         20.468
LGA    R      82      R      82         22.051
LGA    A      83      A      83         17.280
LGA    F      84      F      84         14.769
LGA    D      85      D      85         18.978
LGA    L      86      L      86         19.604
LGA    R      87      R      87         19.354
LGA    E      88      E      88         17.275
LGA    E      89      E      89         23.797
LGA    S      90      S      90         26.498
LGA    Y      92      Y      92         18.416
LGA    G      93      G      93         20.429
LGA    I      94      I      94         22.338
LGA    Y      95      Y      95         27.541
LGA    K      96      K      96         26.927
LGA    E      97      E      97         29.643
LGA    V      98      V      98         27.926
LGA    S      99      S      99         31.687
LGA    K     100      K     100         32.688
LGA    D     101      D     101         37.137
LGA    L     102      L     102         33.834
LGA    A     103      A     103         29.587
LGA    I     104      I     104         34.088

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   78  123    4.0     20    2.61    18.089    15.193     0.739

LGA_LOCAL      RMSD =  2.607  Number of atoms =   20  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 17.104  Number of atoms =   78 
Std_ALL_ATOMS  RMSD = 12.256  (standard rmsd on all 78 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.905053 * X  +   0.198561 * Y  +   0.376102 * Z  +  51.654888
  Y_new =  -0.350490 * X  +  -0.849138 * Y  +  -0.395123 * Z  +  60.993237
  Z_new =   0.240906 * X  +  -0.489427 * Y  +   0.838108 * Z  +  14.757905 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.528547    2.613046  [ DEG:   -30.2835    149.7165 ]
  Theta =  -0.243299   -2.898293  [ DEG:   -13.9400   -166.0600 ]
  Phi   =  -2.772117    0.369475  [ DEG:  -158.8306     21.1694 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0367AL333_5-D1                               
REMARK     2: T0367_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0367AL333_5-D1.T0367_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   78  123   4.0   20   2.61  15.193    12.26
REMARK  ---------------------------------------------------------- 
MOLECULE T0367AL333_5-D1
REMARK Aligment from pdb entry: 1q1h_A
ATOM      1  N   MET     1      57.640  19.079  38.753  1.00  0.00              
ATOM      2  CA  MET     1      56.391  19.594  38.133  1.00  0.00              
ATOM      3  C   MET     1      55.993  18.739  36.934  1.00  0.00              
ATOM      4  O   MET     1      55.541  17.604  37.100  1.00  0.00              
ATOM      5  N   ASP     2      56.162  19.288  35.730  1.00  0.00              
ATOM      6  CA  ASP     2      55.835  18.578  34.487  1.00  0.00              
ATOM      7  C   ASP     2      54.315  18.452  34.267  1.00  0.00              
ATOM      8  O   ASP     2      53.732  19.128  33.403  1.00  0.00              
ATOM      9  N   GLU     3      53.676  17.588  35.048  1.00  0.00              
ATOM     10  CA  GLU     3      52.240  17.398  34.927  1.00  0.00              
ATOM     11  C   GLU     3      51.508  18.364  35.838  1.00  0.00              
ATOM     12  O   GLU     3      50.417  18.066  36.306  1.00  0.00              
ATOM     13  N   LEU     4      52.113  19.518  36.099  1.00  0.00              
ATOM     14  CA  LEU     4      51.482  20.513  36.956  1.00  0.00              
ATOM     15  C   LEU     4      51.048  21.754  36.169  1.00  0.00              
ATOM     16  O   LEU     4      50.280  22.568  36.672  1.00  0.00              
ATOM     17  N   GLU     5      51.542  21.908  34.941  1.00  0.00              
ATOM     18  CA  GLU     5      51.139  23.049  34.119  1.00  0.00              
ATOM     19  C   GLU     5      49.913  22.571  33.354  1.00  0.00              
ATOM     20  O   GLU     5      49.491  23.176  32.374  1.00  0.00              
ATOM     21  N   LEU     6      49.362  21.458  33.826  1.00  0.00              
ATOM     22  CA  LEU     6      48.173  20.843  33.250  1.00  0.00              
ATOM     23  C   LEU     6      47.234  20.490  34.401  1.00  0.00              
ATOM     24  O   LEU     6      46.033  20.716  34.329  1.00  0.00              
ATOM     25  N   ARG     7      47.793  19.934  35.466  1.00  0.00              
ATOM     26  CA  ARG     7      47.005  19.597  36.641  1.00  0.00              
ATOM     27  C   ARG     7      46.507  20.935  37.179  1.00  0.00              
ATOM     28  O   ARG     7      45.694  21.006  38.110  1.00  0.00              
ATOM     29  N   ILE     8      47.019  21.997  36.564  1.00  0.00              
ATOM     30  CA  ILE     8      46.687  23.368  36.928  1.00  0.00              
ATOM     31  C   ILE     8      45.579  23.845  35.990  1.00  0.00              
ATOM     32  O   ILE     8      44.565  24.386  36.439  1.00  0.00              
ATOM     33  N   ARG     9      45.774  23.622  34.691  1.00  0.00              
ATOM     34  CA  ARG     9      44.806  24.016  33.677  1.00  0.00              
ATOM     35  C   ARG     9      43.594  23.096  33.694  1.00  0.00              
ATOM     36  O   ARG     9      42.609  23.334  33.003  1.00  0.00              
ATOM     37  N   LYS    10      43.676  22.045  34.498  1.00  0.00              
ATOM     38  CA  LYS    10      42.598  21.073  34.631  1.00  0.00              
ATOM     39  C   LYS    10      41.740  21.444  35.844  1.00  0.00              
ATOM     40  O   LYS    10      40.511  21.467  35.764  1.00  0.00              
ATOM     41  N   ALA    11      42.387  21.735  36.966  1.00  0.00              
ATOM     42  CA  ALA    11      41.661  22.140  38.166  1.00  0.00              
ATOM     43  C   ALA    11      40.915  23.429  37.849  1.00  0.00              
ATOM     44  O   ALA    11      39.856  23.703  38.413  1.00  0.00              
ATOM     45  N   GLU    12      41.484  24.223  36.946  1.00  0.00              
ATOM     46  CA  GLU    12      40.866  25.475  36.541  1.00  0.00              
ATOM     47  C   GLU    12      39.550  25.147  35.842  1.00  0.00              
ATOM     48  O   GLU    12      38.467  25.440  36.359  1.00  0.00              
ATOM     49  N   LYS    13      39.660  24.529  34.666  1.00  0.00              
ATOM     50  CA  LYS    13      38.500  24.143  33.876  1.00  0.00              
ATOM     51  C   LYS    13      37.393  23.622  34.769  1.00  0.00              
ATOM     52  O   LYS    13      36.349  24.244  34.891  1.00  0.00              
ATOM     53  N   LEU    14      37.626  22.488  35.415  1.00  0.00              
ATOM     54  CA  LEU    14      36.605  21.895  36.266  1.00  0.00              
ATOM     55  C   LEU    14      36.037  22.845  37.301  1.00  0.00              
ATOM     56  O   LEU    14      35.151  22.469  38.057  1.00  0.00              
ATOM     57  N   VAL    15      36.545  24.071  37.331  1.00  0.00              
ATOM     58  CA  VAL    15      36.078  25.070  38.289  1.00  0.00              
ATOM     59  C   VAL    15      35.481  26.299  37.634  1.00  0.00              
ATOM     60  O   VAL    15      34.470  26.806  38.084  1.00  0.00              
ATOM     61  N   GLN    16      36.242  28.373  30.319  1.00  0.00              
ATOM     62  CA  GLN    16      37.285  27.947  29.411  1.00  0.00              
ATOM     63  C   GLN    16      37.774  29.299  28.931  1.00  0.00              
ATOM     64  O   GLN    16      38.926  29.461  28.522  1.00  0.00              
ATOM     65  N   ASP    17      36.868  30.273  29.002  1.00  0.00              
ATOM     66  CA  ASP    17      37.165  31.646  28.621  1.00  0.00              
ATOM     67  C   ASP    17      38.322  32.028  29.527  1.00  0.00              
ATOM     68  O   ASP    17      39.207  32.804  29.146  1.00  0.00              
ATOM     69  N   ALA    18      38.298  31.458  30.729  1.00  0.00              
ATOM     70  CA  ALA    18      39.313  31.699  31.744  1.00  0.00              
ATOM     71  C   ALA    18      40.625  30.958  31.462  1.00  0.00              
ATOM     72  O   ALA    18      41.700  31.568  31.449  1.00  0.00              
ATOM     73  N   LYS    19      40.530  29.650  31.233  1.00  0.00              
ATOM     74  CA  LYS    19      41.702  28.823  30.961  1.00  0.00              
ATOM     75  C   LYS    19      42.630  29.446  29.929  1.00  0.00              
ATOM     76  O   LYS    19      43.841  29.251  29.984  1.00  0.00              
ATOM     77  N   LYS    20      42.066  30.194  28.989  1.00  0.00              
ATOM     78  CA  LYS    20      42.870  30.850  27.957  1.00  0.00              
ATOM     79  C   LYS    20      43.810  31.881  28.565  1.00  0.00              
ATOM     80  O   LYS    20      44.949  32.026  28.120  1.00  0.00              
ATOM     81  N   GLU    21      43.325  32.593  29.582  1.00  0.00              
ATOM     82  CA  GLU    21      44.126  33.607  30.255  1.00  0.00              
ATOM     83  C   GLU    21      45.270  32.977  31.031  1.00  0.00              
ATOM     84  O   GLU    21      46.435  33.346  30.843  1.00  0.00              
ATOM     85  N   PHE    22      44.932  32.021  31.894  1.00  0.00              
ATOM     86  CA  PHE    22      45.928  31.330  32.712  1.00  0.00              
ATOM     87  C   PHE    22      47.087  30.872  31.840  1.00  0.00              
ATOM     88  O   PHE    22      48.233  30.837  32.281  1.00  0.00              
ATOM     89  N   GLU    23      46.767  30.534  30.594  1.00  0.00              
ATOM     90  CA  GLU    23      47.742  30.074  29.618  1.00  0.00              
ATOM     91  C   GLU    23      48.878  31.060  29.356  1.00  0.00              
ATOM     92  O   GLU    23      50.010  30.816  29.777  1.00  0.00              
ATOM     93  N   MET    24      48.580  32.154  28.652  1.00  0.00              
ATOM     94  CA  MET    24      49.584  33.180  28.343  1.00  0.00              
ATOM     95  C   MET    24      50.503  33.389  29.546  1.00  0.00              
ATOM     96  O   MET    24      51.716  33.543  29.403  1.00  0.00              
ATOM     97  N   LEU    47      49.903  33.411  30.732  1.00  0.00              
ATOM     98  CA  LEU    47      50.647  33.591  31.963  1.00  0.00              
ATOM     99  C   LEU    47      51.648  32.453  32.097  1.00  0.00              
ATOM    100  O   LEU    47      52.856  32.682  32.108  1.00  0.00              
ATOM    101  N   GLY    48      51.138  31.224  32.185  1.00  0.00              
ATOM    102  CA  GLY    48      51.989  30.037  32.325  1.00  0.00              
ATOM    103  C   GLY    48      53.091  30.032  31.270  1.00  0.00              
ATOM    104  O   GLY    48      54.147  29.445  31.478  1.00  0.00              
ATOM    105  N   TYR    49      52.836  30.716  30.155  1.00  0.00              
ATOM    106  CA  TYR    49      53.776  30.811  29.042  1.00  0.00              
ATOM    107  C   TYR    49      54.891  31.828  29.280  1.00  0.00              
ATOM    108  O   TYR    49      56.059  31.458  29.436  1.00  0.00              
ATOM    109  N   GLY    50      54.532  33.111  29.289  1.00  0.00              
ATOM    110  CA  GLY    50      55.517  34.168  29.479  1.00  0.00              
ATOM    111  C   GLY    50      56.484  33.851  30.616  1.00  0.00              
ATOM    112  O   GLY    50      57.675  34.163  30.531  1.00  0.00              
ATOM    113  N   ARG    51      55.965  33.231  31.671  1.00  0.00              
ATOM    114  CA  ARG    51      56.793  32.854  32.807  1.00  0.00              
ATOM    115  C   ARG    51      57.219  33.979  33.732  1.00  0.00              
ATOM    116  O   ARG    51      58.099  33.800  34.572  1.00  0.00              
ATOM    117  N   ASP    52      56.601  35.144  33.568  1.00  0.00              
ATOM    118  CA  ASP    52      56.902  36.313  34.388  1.00  0.00              
ATOM    119  C   ASP    52      55.659  37.193  34.396  1.00  0.00              
ATOM    120  O   ASP    52      54.847  37.127  33.470  1.00  0.00              
ATOM    121  N   SER    53      55.526  38.017  35.435  1.00  0.00              
ATOM    122  CA  SER    53      54.368  38.895  35.603  1.00  0.00              
ATOM    123  C   SER    53      53.845  39.497  34.318  1.00  0.00              
ATOM    124  O   SER    53      54.612  39.812  33.406  1.00  0.00              
ATOM    125  N   LYS    54      52.528  39.679  34.280  1.00  0.00              
ATOM    126  CA  LYS    54      51.855  40.270  33.142  1.00  0.00              
ATOM    127  C   LYS    54      50.745  41.194  33.647  1.00  0.00              
ATOM    128  O   LYS    54      50.387  41.158  34.820  1.00  0.00              
ATOM    129  N   THR    55      50.207  42.036  32.775  1.00  0.00              
ATOM    130  CA  THR    55      49.148  42.953  33.190  1.00  0.00              
ATOM    131  C   THR    55      48.002  42.962  32.193  1.00  0.00              
ATOM    132  O   THR    55      48.235  43.030  30.995  1.00  0.00              
ATOM    133  N   HIS    56      46.767  42.904  32.686  1.00  0.00              
ATOM    134  CA  HIS    56      45.607  42.875  31.803  1.00  0.00              
ATOM    135  C   HIS    56      45.951  43.402  30.414  1.00  0.00              
ATOM    136  O   HIS    56      45.686  42.728  29.417  1.00  0.00              
ATOM    137  N   ARG    57      46.562  44.583  30.342  1.00  0.00              
ATOM    138  CA  ARG    57      46.944  45.139  29.044  1.00  0.00              
ATOM    139  C   ARG    57      47.667  44.037  28.254  1.00  0.00              
ATOM    140  O   ARG    57      47.126  43.507  27.276  1.00  0.00              
ATOM    141  N   GLY    58      48.883  43.700  28.692  1.00  0.00              
ATOM    142  CA  GLY    58      49.693  42.664  28.050  1.00  0.00              
ATOM    143  C   GLY    58      48.891  41.421  27.675  1.00  0.00              
ATOM    144  O   GLY    58      48.788  41.069  26.498  1.00  0.00              
ATOM    145  N   THR    59      48.338  40.750  28.681  1.00  0.00              
ATOM    146  CA  THR    59      47.550  39.541  28.468  1.00  0.00              
ATOM    147  C   THR    59      46.443  39.807  27.457  1.00  0.00              
ATOM    148  O   THR    59      45.885  38.877  26.876  1.00  0.00              
ATOM    149  N   ILE    60      46.134  41.088  27.257  1.00  0.00              
ATOM    150  CA  ILE    60      45.097  41.505  26.316  1.00  0.00              
ATOM    151  C   ILE    60      45.671  41.924  24.960  1.00  0.00              
ATOM    152  O   ILE    60      45.066  41.660  23.920  1.00  0.00              
ATOM    153  N   TYR    61      46.834  42.576  24.967  1.00  0.00              
ATOM    154  CA  TYR    61      47.456  43.018  23.717  1.00  0.00              
ATOM    155  C   TYR    61      48.001  41.849  22.893  1.00  0.00              
ATOM    156  O   TYR    61      47.644  41.676  21.728  1.00  0.00              
ATOM    157  N   LEU    62      48.868  41.055  23.510  1.00  0.00              
ATOM    158  CA  LEU    62      49.484  39.902  22.853  1.00  0.00              
ATOM    159  C   LEU    62      48.568  38.674  22.830  1.00  0.00              
ATOM    160  O   LEU    62      49.043  37.536  22.865  1.00  0.00              
ATOM    161  N   ILE    63      47.261  38.913  22.775  1.00  0.00              
ATOM    162  CA  ILE    63      46.262  37.849  22.737  1.00  0.00              
ATOM    163  C   ILE    63      45.132  38.289  21.830  1.00  0.00              
ATOM    164  O   ILE    63      44.611  37.514  21.032  1.00  0.00              
ATOM    165  N   TRP    64      44.765  39.557  21.985  1.00  0.00              
ATOM    166  CA  TRP    64      43.694  40.191  21.233  1.00  0.00              
ATOM    167  C   TRP    64      42.338  39.846  21.847  1.00  0.00              
ATOM    168  O   TRP    64      41.774  38.780  21.597  1.00  0.00              
ATOM    169  N   GLU    68      41.847  40.769  22.671  1.00  0.00              
ATOM    170  CA  GLU    68      40.566  40.668  23.364  1.00  0.00              
ATOM    171  C   GLU    68      40.394  41.921  24.224  1.00  0.00              
ATOM    172  O   GLU    68      41.375  42.551  24.623  1.00  0.00              
ATOM    173  N   GLU    69      39.151  42.285  24.512  1.00  0.00              
ATOM    174  CA  GLU    69      38.909  43.459  25.336  1.00  0.00              
ATOM    175  C   GLU    69      39.567  43.305  26.708  1.00  0.00              
ATOM    176  O   GLU    69      39.317  42.328  27.417  1.00  0.00              
ATOM    177  N   LEU    70      40.406  44.278  27.070  1.00  0.00              
ATOM    178  CA  LEU    70      41.121  44.271  28.353  1.00  0.00              
ATOM    179  C   LEU    70      40.145  44.138  29.506  1.00  0.00              
ATOM    180  O   LEU    70      40.518  43.752  30.614  1.00  0.00              
ATOM    181  N   GLY    71      38.892  44.475  29.239  1.00  0.00              
ATOM    182  CA  GLY    71      37.858  44.401  30.249  1.00  0.00              
ATOM    183  C   GLY    71      37.517  42.957  30.559  1.00  0.00              
ATOM    184  O   GLY    71      37.543  42.551  31.710  1.00  0.00              
ATOM    185  N   LEU    72      37.189  42.186  29.527  1.00  0.00              
ATOM    186  CA  LEU    72      36.847  40.776  29.696  1.00  0.00              
ATOM    187  C   LEU    72      38.096  40.002  30.129  1.00  0.00              
ATOM    188  O   LEU    72      38.011  38.882  30.633  1.00  0.00              
ATOM    189  N   SER    73      39.254  40.619  29.920  1.00  0.00              
ATOM    190  CA  SER    73      40.525  40.035  30.301  1.00  0.00              
ATOM    191  C   SER    73      40.641  40.164  31.803  1.00  0.00              
ATOM    192  O   SER    73      41.020  39.219  32.488  1.00  0.00              
ATOM    193  N   ASP    74      40.310  41.344  32.316  1.00  0.00              
ATOM    194  CA  ASP    74      40.377  41.589  33.752  1.00  0.00              
ATOM    195  C   ASP    74      39.262  40.812  34.430  1.00  0.00              
ATOM    196  O   ASP    74      39.355  40.467  35.599  1.00  0.00              
ATOM    197  N   ASP    75      38.197  40.547  33.692  1.00  0.00              
ATOM    198  CA  ASP    75      37.081  39.805  34.244  1.00  0.00              
ATOM    199  C   ASP    75      37.526  38.374  34.527  1.00  0.00              
ATOM    200  O   ASP    75      37.192  37.806  35.569  1.00  0.00              
ATOM    201  N   ASP    76      38.293  37.797  33.605  1.00  0.00              
ATOM    202  CA  ASP    76      38.791  36.447  33.790  1.00  0.00              
ATOM    203  C   ASP    76      39.737  36.448  34.975  1.00  0.00              
ATOM    204  O   ASP    76      39.524  35.725  35.949  1.00  0.00              
ATOM    205  N   CYS    77      40.766  37.279  34.912  1.00  0.00              
ATOM    206  CA  CYS    77      41.723  37.353  36.007  1.00  0.00              
ATOM    207  C   CYS    77      41.105  37.357  37.416  1.00  0.00              
ATOM    208  O   CYS    77      41.515  36.562  38.254  1.00  0.00              
ATOM    209  N   SER    78      40.121  38.211  37.694  1.00  0.00              
ATOM    210  CA  SER    78      39.555  38.235  39.046  1.00  0.00              
ATOM    211  C   SER    78      38.799  36.972  39.426  1.00  0.00              
ATOM    212  O   SER    78      38.683  36.668  40.607  1.00  0.00              
ATOM    213  N   LYS    79      38.272  36.257  38.428  1.00  0.00              
ATOM    214  CA  LYS    79      37.524  35.008  38.642  1.00  0.00              
ATOM    215  C   LYS    79      38.455  33.885  39.092  1.00  0.00              
ATOM    216  O   LYS    79      38.123  33.114  39.985  1.00  0.00              
ATOM    217  N   LEU    80      39.614  33.796  38.441  1.00  0.00              
ATOM    218  CA  LEU    80      40.639  32.803  38.759  1.00  0.00              
ATOM    219  C   LEU    80      41.212  33.217  40.102  1.00  0.00              
ATOM    220  O   LEU    80      41.304  32.416  41.034  1.00  0.00              
ATOM    221  N   SER    81      39.630  32.076  42.944  1.00  0.00              
ATOM    222  CA  SER    81      39.835  30.660  43.228  1.00  0.00              
ATOM    223  C   SER    81      41.254  30.389  43.691  1.00  0.00              
ATOM    224  O   SER    81      41.490  29.474  44.488  1.00  0.00              
ATOM    225  N   ARG    82      42.196  31.183  43.185  1.00  0.00              
ATOM    226  CA  ARG    82      43.581  31.026  43.586  1.00  0.00              
ATOM    227  C   ARG    82      44.503  30.462  42.529  1.00  0.00              
ATOM    228  O   ARG    82      45.472  29.778  42.859  1.00  0.00              
ATOM    229  N   ALA    83      44.215  30.754  41.264  1.00  0.00              
ATOM    230  CA  ALA    83      45.042  30.265  40.168  1.00  0.00              
ATOM    231  C   ALA    83      45.933  31.386  39.702  1.00  0.00              
ATOM    232  O   ALA    83      46.710  31.229  38.765  1.00  0.00              
ATOM    233  N   PHE    84      45.811  32.522  40.374  1.00  0.00              
ATOM    234  CA  PHE    84      46.593  33.709  40.058  1.00  0.00              
ATOM    235  C   PHE    84      46.607  34.645  41.268  1.00  0.00              
ATOM    236  O   PHE    84      45.699  34.619  42.099  1.00  0.00              
ATOM    237  N   ASP    85      47.657  35.453  41.378  1.00  0.00              
ATOM    238  CA  ASP    85      47.785  36.440  42.455  1.00  0.00              
ATOM    239  C   ASP    85      48.250  37.727  41.808  1.00  0.00              
ATOM    240  O   ASP    85      48.969  37.693  40.815  1.00  0.00              
ATOM    241  N   LEU    86      47.843  38.862  42.352  1.00  0.00              
ATOM    242  CA  LEU    86      48.273  40.139  41.787  1.00  0.00              
ATOM    243  C   LEU    86      49.035  41.007  42.794  1.00  0.00              
ATOM    244  O   LEU    86      49.128  40.692  43.980  1.00  0.00              
ATOM    245  N   ARG    87      49.580  42.105  42.292  1.00  0.00              
ATOM    246  CA  ARG    87      50.316  43.061  43.102  1.00  0.00              
ATOM    247  C   ARG    87      50.177  44.426  42.433  1.00  0.00              
ATOM    248  O   ARG    87      50.541  44.591  41.263  1.00  0.00              
ATOM    249  N   GLU    88      49.615  45.391  43.153  1.00  0.00              
ATOM    250  CA  GLU    88      49.470  46.727  42.597  1.00  0.00              
ATOM    251  C   GLU    88      50.628  47.574  43.077  1.00  0.00              
ATOM    252  O   GLU    88      50.814  47.762  44.275  1.00  0.00              
ATOM    253  N   GLU    89      51.409  48.080  42.135  1.00  0.00              
ATOM    254  CA  GLU    89      52.558  48.894  42.472  1.00  0.00              
ATOM    255  C   GLU    89      52.499  50.240  41.766  1.00  0.00              
ATOM    256  O   GLU    89      52.490  50.306  40.531  1.00  0.00              
ATOM    257  N   SER    90      52.459  51.309  42.564  1.00  0.00              
ATOM    258  CA  SER    90      52.396  52.674  42.045  1.00  0.00              
ATOM    259  C   SER    90      53.558  53.011  41.109  1.00  0.00              
ATOM    260  O   SER    90      53.352  53.487  39.987  1.00  0.00              
ATOM    261  N   TYR    92      48.703  53.804  39.236  1.00  0.00              
ATOM    262  CA  TYR    92      48.782  52.539  39.980  1.00  0.00              
ATOM    263  C   TYR    92      48.683  51.368  39.012  1.00  0.00              
ATOM    264  O   TYR    92      47.917  51.415  38.053  1.00  0.00              
ATOM    265  N   GLY    93      49.423  50.300  39.262  1.00  0.00              
ATOM    266  CA  GLY    93      49.351  49.169  38.352  1.00  0.00              
ATOM    267  C   GLY    93      49.249  47.814  39.042  1.00  0.00              
ATOM    268  O   GLY    93      49.858  47.580  40.079  1.00  0.00              
ATOM    269  N   ILE    94      48.458  46.925  38.459  1.00  0.00              
ATOM    270  CA  ILE    94      48.303  45.588  39.005  1.00  0.00              
ATOM    271  C   ILE    94      49.068  44.643  38.108  1.00  0.00              
ATOM    272  O   ILE    94      49.015  44.771  36.883  1.00  0.00              
ATOM    273  N   TYR    95      49.793  43.708  38.712  1.00  0.00              
ATOM    274  CA  TYR    95      50.527  42.729  37.934  1.00  0.00              
ATOM    275  C   TYR    95      50.070  41.347  38.350  1.00  0.00              
ATOM    276  O   TYR    95      49.896  41.061  39.531  1.00  0.00              
ATOM    277  N   LYS    96      49.862  40.487  37.367  1.00  0.00              
ATOM    278  CA  LYS    96      49.397  39.145  37.647  1.00  0.00              
ATOM    279  C   LYS    96      50.461  38.087  37.443  1.00  0.00              
ATOM    280  O   LYS    96      51.381  38.251  36.637  1.00  0.00              
ATOM    281  N   GLU    97      50.326  37.000  38.192  1.00  0.00              
ATOM    282  CA  GLU    97      51.256  35.892  38.113  1.00  0.00              
ATOM    283  C   GLU    97      50.423  34.657  38.425  1.00  0.00              
ATOM    284  O   GLU    97      49.366  34.772  39.053  1.00  0.00              
ATOM    285  N   VAL    98      50.857  33.473  37.953  1.00  0.00              
ATOM    286  CA  VAL    98      50.164  32.203  38.186  1.00  0.00              
ATOM    287  C   VAL    98      50.633  31.587  39.505  1.00  0.00              
ATOM    288  O   VAL    98      51.829  31.368  39.695  1.00  0.00              
ATOM    289  N   SER    99      49.709  31.302  40.416  1.00  0.00              
ATOM    290  CA  SER    99      50.090  30.718  41.698  1.00  0.00              
ATOM    291  C   SER    99      50.441  29.230  41.613  1.00  0.00              
ATOM    292  O   SER    99      50.175  28.470  42.549  1.00  0.00              
ATOM    293  N   LYS   100      51.056  28.814  40.509  1.00  0.00              
ATOM    294  CA  LYS   100      51.413  27.416  40.359  1.00  0.00              
ATOM    295  C   LYS   100      52.474  26.918  41.369  1.00  0.00              
ATOM    296  O   LYS   100      52.319  25.845  41.954  1.00  0.00              
ATOM    297  N   ASP   101      53.546  27.679  41.577  1.00  0.00              
ATOM    298  CA  ASP   101      54.567  27.279  42.538  1.00  0.00              
ATOM    299  C   ASP   101      53.890  26.974  43.866  1.00  0.00              
ATOM    300  O   ASP   101      54.322  26.092  44.607  1.00  0.00              
ATOM    301  N   LEU   102      52.830  27.714  44.175  1.00  0.00              
ATOM    302  CA  LEU   102      52.097  27.485  45.417  1.00  0.00              
ATOM    303  C   LEU   102      51.347  26.155  45.283  1.00  0.00              
ATOM    304  O   LEU   102      51.014  25.510  46.281  1.00  0.00              
ATOM    305  N   ALA   103      51.095  25.749  44.041  1.00  0.00              
ATOM    306  CA  ALA   103      50.408  24.493  43.772  1.00  0.00              
ATOM    307  C   ALA   103      51.330  23.347  44.165  1.00  0.00              
ATOM    308  O   ALA   103      50.906  22.193  44.269  1.00  0.00              
ATOM    309  N   ILE   104      52.598  23.677  44.385  1.00  0.00              
ATOM    310  CA  ILE   104      53.580  22.687  44.808  1.00  0.00              
ATOM    311  C   ILE   104      54.233  23.226  46.067  1.00  0.00              
ATOM    312  O   ILE   104      53.791  22.836  47.174  1.00  0.00              
END
