
PFRMAT TS
TARGET T0350
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0350 model 3 Wed Jun 28 13:53:44 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  3
PARENT N/A
ATOM      2  N   VAL    32      -8.133   7.108   4.986  1.00  0.00
ATOM      3  CA  VAL    32      -9.316   7.587   4.286  1.00  0.00
ATOM      4  CB  VAL    32     -10.078   8.635   5.117  1.00  0.00
ATOM      5  CG1 VAL    32     -10.564   8.028   6.425  1.00  0.00
ATOM      6  CG2 VAL    32      -9.176   9.815   5.443  1.00  0.00
ATOM      7  O   VAL    32      -9.485   9.245   2.553  1.00  0.00
ATOM      8  C   VAL    32      -8.909   8.232   2.958  1.00  0.00
ATOM      9  N   HIS    33      -7.908   7.644   2.301  1.00  0.00
ATOM     10  CA  HIS    33      -7.413   8.114   0.998  1.00  0.00
ATOM     11  CB  HIS    33      -5.960   8.579   1.112  1.00  0.00
ATOM     12  CG  HIS    33      -5.760   9.698   2.088  1.00  0.00
ATOM     13  CD2 HIS    33      -5.389   9.796   3.492  1.00  0.00
ATOM     14  ND1 HIS    33      -5.920  11.022   1.745  1.00  0.00
ATOM     15  CE1 HIS    33      -5.673  11.787   2.824  1.00  0.00
ATOM     16  NE2 HIS    33      -5.353  11.057   3.875  1.00  0.00
ATOM     17  O   HIS    33      -6.968   5.883   0.244  1.00  0.00
ATOM     18  C   HIS    33      -7.495   6.967  -0.011  1.00  0.00
ATOM     19  N   GLN    34      -8.149   7.214  -1.147  1.00  0.00
ATOM     20  CA  GLN    34      -8.303   6.206  -2.194  1.00  0.00
ATOM     21  CB  GLN    34      -9.439   6.587  -3.145  1.00  0.00
ATOM     22  CG  GLN    34     -10.810   6.628  -2.488  1.00  0.00
ATOM     23  CD  GLN    34     -11.907   7.028  -3.455  1.00  0.00
ATOM     24  OE1 GLN    34     -11.635   7.512  -4.553  1.00  0.00
ATOM     25  NE2 GLN    34     -13.155   6.826  -3.047  1.00  0.00
ATOM     26  O   GLN    34      -7.023   6.379  -4.233  1.00  0.00
ATOM     27  C   GLN    34      -7.046   6.030  -3.047  1.00  0.00
ATOM     28  N   VAL    35      -6.009   5.481  -2.427  1.00  0.00
ATOM     29  CA  VAL    35      -4.735   5.223  -3.087  1.00  0.00
ATOM     30  CB  VAL    35      -3.716   4.595  -2.119  1.00  0.00
ATOM     31  CG1 VAL    35      -2.458   4.180  -2.866  1.00  0.00
ATOM     32  CG2 VAL    35      -3.325   5.588  -1.036  1.00  0.00
ATOM     33  O   VAL    35      -5.452   3.244  -4.191  1.00  0.00
ATOM     34  C   VAL    35      -4.805   4.281  -4.266  1.00  0.00
ATOM     35  N   SER    36      -4.120   4.643  -5.350  1.00  0.00
ATOM     36  CA  SER    36      -4.023   3.767  -6.510  1.00  0.00
ATOM     37  CB  SER    36      -3.919   4.589  -7.796  1.00  0.00
ATOM     38  OG  SER    36      -5.097   5.343  -8.016  1.00  0.00
ATOM     39  O   SER    36      -1.878   3.451  -5.451  1.00  0.00
ATOM     40  C   SER    36      -2.735   2.977  -6.201  1.00  0.00
ATOM     41  N   TYR    37      -2.597   1.754  -6.737  1.00  0.00
ATOM     42  CA  TYR    37      -1.385   0.973  -6.465  1.00  0.00
ATOM     43  CB  TYR    37      -1.421  -0.354  -7.226  1.00  0.00
ATOM     44  CG  TYR    37      -2.389  -1.364  -6.649  1.00  0.00
ATOM     45  CD1 TYR    37      -3.582  -1.655  -7.297  1.00  0.00
ATOM     46  CD2 TYR    37      -2.105  -2.024  -5.460  1.00  0.00
ATOM     47  CE1 TYR    37      -4.472  -2.576  -6.779  1.00  0.00
ATOM     48  CE2 TYR    37      -2.983  -2.947  -4.926  1.00  0.00
ATOM     49  CZ  TYR    37      -4.174  -3.221  -5.598  1.00  0.00
ATOM     50  OH  TYR    37      -5.059  -4.137  -5.079  1.00  0.00
ATOM     51  O   TYR    37       0.945   1.552  -6.262  1.00  0.00
ATOM     52  C   TYR    37      -0.114   1.700  -6.883  1.00  0.00
ATOM     53  N   THR    38      -0.230   2.513  -7.924  1.00  0.00
ATOM     54  CA  THR    38       0.901   3.262  -8.412  1.00  0.00
ATOM     55  CB  THR    38       0.661   3.779  -9.844  1.00  0.00
ATOM     56  CG2 THR    38       1.867   4.563 -10.337  1.00  0.00
ATOM     57  OG1 THR    38       0.437   2.670 -10.722  1.00  0.00
ATOM     58  O   THR    38       2.325   4.794  -7.209  1.00  0.00
ATOM     59  C   THR    38       1.170   4.472  -7.514  1.00  0.00
ATOM     60  N   ASN    39       0.102   5.141  -7.089  1.00  0.00
ATOM     61  CA  ASN    39       0.236   6.302  -6.212  1.00  0.00
ATOM     62  CB  ASN    39      -1.133   6.926  -5.936  1.00  0.00
ATOM     63  CG  ASN    39      -1.689   7.668  -7.137  1.00  0.00
ATOM     64  ND2 ASN    39      -3.000   7.883  -7.144  1.00  0.00
ATOM     65  OD1 ASN    39      -0.948   8.040  -8.045  1.00  0.00
ATOM     66  O   ASN    39       1.703   6.624  -4.349  1.00  0.00
ATOM     67  C   ASN    39       0.859   5.905  -4.875  1.00  0.00
ATOM     68  N   LEU    40       0.472   4.745  -4.342  1.00  0.00
ATOM     69  CA  LEU    40       1.006   4.295  -3.054  1.00  0.00
ATOM     70  CB  LEU    40       0.309   3.011  -2.603  1.00  0.00
ATOM     71  CG  LEU    40       0.746   2.439  -1.253  1.00  0.00
ATOM     72  CD1 LEU    40       0.484   3.437  -0.135  1.00  0.00
ATOM     73  CD2 LEU    40      -0.014   1.160  -0.937  1.00  0.00
ATOM     74  O   LEU    40       3.265   4.369  -2.236  1.00  0.00
ATOM     75  C   LEU    40       2.499   4.011  -3.133  1.00  0.00
ATOM     76  N   ALA    41       2.911   3.343  -4.202  1.00  0.00
ATOM     77  CA  ALA    41       4.318   3.012  -4.375  1.00  0.00
ATOM     78  CB  ALA    41       4.513   2.162  -5.621  1.00  0.00
ATOM     79  O   ALA    41       6.300   4.328  -4.066  1.00  0.00
ATOM     80  C   ALA    41       5.156   4.277  -4.523  1.00  0.00
ATOM     81  N   GLU    42       4.573   5.289  -5.171  1.00  0.00
ATOM     82  CA  GLU    42       5.228   6.583  -5.400  1.00  0.00
ATOM     83  CB  GLU    42       4.376   7.460  -6.319  1.00  0.00
ATOM     84  CG  GLU    42       4.317   6.977  -7.758  1.00  0.00
ATOM     85  CD  GLU    42       3.366   7.796  -8.610  1.00  0.00
ATOM     86  OE1 GLU    42       2.700   8.696  -8.058  1.00  0.00
ATOM     87  OE2 GLU    42       3.288   7.537  -9.829  1.00  0.00
ATOM     88  O   GLU    42       6.419   8.016  -3.888  1.00  0.00
ATOM     89  C   GLU    42       5.426   7.317  -4.076  1.00  0.00
ATOM     90  N   MET    43       4.475   7.166  -3.156  1.00  0.00
ATOM     91  CA  MET    43       4.578   7.818  -1.852  1.00  0.00
ATOM     92  CB  MET    43       3.245   7.735  -1.104  1.00  0.00
ATOM     93  CG  MET    43       2.139   8.582  -1.713  1.00  0.00
ATOM     94  SD  MET    43       2.540  10.339  -1.738  1.00  0.00
ATOM     95  CE  MET    43       2.505  10.719   0.013  1.00  0.00
ATOM     96  O   MET    43       6.460   7.725  -0.367  1.00  0.00
ATOM     97  C   MET    43       5.660   7.100  -1.058  1.00  0.00
ATOM     98  N   VAL    44       5.684   5.777  -1.167  1.00  0.00
ATOM     99  CA  VAL    44       6.677   4.983  -0.471  1.00  0.00
ATOM    100  CB  VAL    44       6.434   3.476  -0.670  1.00  0.00
ATOM    101  CG1 VAL    44       7.593   2.670  -0.103  1.00  0.00
ATOM    102  CG2 VAL    44       5.158   3.044   0.037  1.00  0.00
ATOM    103  O   VAL    44       9.010   5.421  -0.225  1.00  0.00
ATOM    104  C   VAL    44       8.068   5.321  -1.003  1.00  0.00
ATOM    105  N   GLY    45       8.193   5.497  -2.323  1.00  0.00
ATOM    106  CA  GLY    45       9.486   5.854  -2.926  1.00  0.00
ATOM    107  O   GLY    45      11.195   7.286  -2.054  1.00  0.00
ATOM    108  C   GLY    45      10.005   7.170  -2.350  1.00  0.00
ATOM    109  N   GLU    46       9.122   8.158  -2.199  1.00  0.00
ATOM    110  CA  GLU    46       9.524   9.454  -1.650  1.00  0.00
ATOM    111  CB  GLU    46       8.328  10.406  -1.594  1.00  0.00
ATOM    112  CG  GLU    46       8.664  11.796  -1.078  1.00  0.00
ATOM    113  CD  GLU    46       7.463  12.720  -1.068  1.00  0.00
ATOM    114  OE1 GLU    46       6.369  12.278  -1.478  1.00  0.00
ATOM    115  OE2 GLU    46       7.615  13.887  -0.650  1.00  0.00
ATOM    116  O   GLU    46      11.119   9.883   0.094  1.00  0.00
ATOM    117  C   GLU    46      10.078   9.306  -0.233  1.00  0.00
ATOM    118  N   MET    47       9.391   8.525   0.601  1.00  0.00
ATOM    119  CA  MET    47       9.853   8.303   1.965  1.00  0.00
ATOM    120  CB  MET    47       8.895   7.371   2.710  1.00  0.00
ATOM    121  CG  MET    47       7.537   7.987   3.011  1.00  0.00
ATOM    122  SD  MET    47       6.395   6.818   3.770  1.00  0.00
ATOM    123  CE  MET    47       7.164   6.583   5.371  1.00  0.00
ATOM    124  O   MET    47      12.176   8.124   2.572  1.00  0.00
ATOM    125  C   MET    47      11.247   7.664   1.903  1.00  0.00
ATOM    126  N   ASN    48      11.391   6.602   1.114  1.00  0.00
ATOM    127  CA  ASN    48      12.690   5.936   0.988  1.00  0.00
ATOM    128  CB  ASN    48      12.603   4.777  -0.007  1.00  0.00
ATOM    129  CG  ASN    48      11.844   3.588   0.548  1.00  0.00
ATOM    130  ND2 ASN    48      11.366   2.727  -0.341  1.00  0.00
ATOM    131  OD1 ASN    48      11.694   3.447   1.761  1.00  0.00
ATOM    132  O   ASN    48      14.925   6.816   0.860  1.00  0.00
ATOM    133  C   ASN    48      13.753   6.923   0.491  1.00  0.00
ATOM    134  N   LYS    49      13.354   7.885  -0.337  1.00  0.00
ATOM    135  CA  LYS    49      14.313   8.880  -0.806  1.00  0.00
ATOM    136  CB  LYS    49      13.680   9.775  -1.874  1.00  0.00
ATOM    137  CG  LYS    49      13.425   9.073  -3.199  1.00  0.00
ATOM    138  CD  LYS    49      12.801  10.018  -4.212  1.00  0.00
ATOM    139  CE  LYS    49      12.514   9.307  -5.525  1.00  0.00
ATOM    140  NZ  LYS    49      11.880  10.215  -6.520  1.00  0.00
ATOM    141  O   LYS    49      15.947  10.083   0.497  1.00  0.00
ATOM    142  C   LYS    49      14.759   9.753   0.374  1.00  0.00
ATOM    143  N   LEU    50      13.826  10.107   1.257  1.00  0.00
ATOM    144  CA  LEU    50      14.167  10.908   2.438  1.00  0.00
ATOM    145  CB  LEU    50      12.900  11.305   3.199  1.00  0.00
ATOM    146  CG  LEU    50      11.967  12.291   2.494  1.00  0.00
ATOM    147  CD1 LEU    50      10.682  12.476   3.288  1.00  0.00
ATOM    148  CD2 LEU    50      12.634  13.649   2.342  1.00  0.00
ATOM    149  O   LEU    50      15.927  10.739   4.069  1.00  0.00
ATOM    150  C   LEU    50      15.071  10.141   3.406  1.00  0.00
ATOM    151  N   LEU    51      14.862   8.825   3.501  1.00  0.00
ATOM    152  CA  LEU    51      15.679   7.972   4.383  1.00  0.00
ATOM    153  CB  LEU    51      15.136   6.542   4.399  1.00  0.00
ATOM    154  CG  LEU    51      13.782   6.338   5.079  1.00  0.00
ATOM    155  CD1 LEU    51      13.282   4.917   4.867  1.00  0.00
ATOM    156  CD2 LEU    51      13.890   6.585   6.577  1.00  0.00
ATOM    157  O   LEU    51      18.072   8.065   4.624  1.00  0.00
ATOM    158  C   LEU    51      17.111   7.968   3.858  1.00  0.00
ATOM    159  N   GLU    52      17.243   7.840   2.544  1.00  0.00
ATOM    160  CA  GLU    52      18.556   7.853   1.915  1.00  0.00
ATOM    161  CB  GLU    52      18.431   7.604   0.410  1.00  0.00
ATOM    162  CG  GLU    52      18.031   6.184   0.047  1.00  0.00
ATOM    163  CD  GLU    52      17.797   6.007  -1.440  1.00  0.00
ATOM    164  OE1 GLU    52      17.875   7.013  -2.178  1.00  0.00
ATOM    165  OE2 GLU    52      17.537   4.863  -1.870  1.00  0.00
ATOM    166  O   GLU    52      20.399   9.285   2.473  1.00  0.00
ATOM    167  C   GLU    52      19.223   9.212   2.138  1.00  0.00
ATOM    168  N   PRO    53      18.445  10.276   1.967  1.00  0.00
ATOM    169  CA  PRO    53      18.912  11.653   2.116  1.00  0.00
ATOM    170  CB  PRO    53      17.689  12.498   1.755  1.00  0.00
ATOM    171  CG  PRO    53      16.908  11.643   0.813  1.00  0.00
ATOM    172  CD  PRO    53      17.036  10.236   1.326  1.00  0.00
ATOM    173  O   PRO    53      20.428  12.719   3.647  1.00  0.00
ATOM    174  C   PRO    53      19.402  12.041   3.513  1.00  0.00
ATOM    175  N   SER    54      18.665  11.625   4.540  1.00  0.00
ATOM    176  CA  SER    54      19.000  11.944   5.923  1.00  0.00
ATOM    177  CB  SER    54      17.731  12.026   6.776  1.00  0.00
ATOM    178  OG  SER    54      17.097  10.763   6.867  1.00  0.00
ATOM    179  O   SER    54      20.317  11.085   7.741  1.00  0.00
ATOM    180  C   SER    54      19.917  10.911   6.593  1.00  0.00
ATOM    181  N   GLN    55      20.252   9.843   5.878  1.00  0.00
ATOM    182  CA  GLN    55      21.152   8.848   6.430  1.00  0.00
ATOM    183  CB  GLN    55      22.287   9.522   7.204  1.00  0.00
ATOM    184  CG  GLN    55      23.175  10.413   6.351  1.00  0.00
ATOM    185  CD  GLN    55      24.335  10.999   7.132  1.00  0.00
ATOM    186  OE1 GLN    55      24.373  10.916   8.359  1.00  0.00
ATOM    187  NE2 GLN    55      25.287  11.591   6.420  1.00  0.00
ATOM    188  O   GLN    55      21.229   7.425   8.341  1.00  0.00
ATOM    189  C   GLN    55      20.554   7.847   7.401  1.00  0.00
ATOM    190  N   VAL    56      19.303   7.461   7.173  1.00  0.00
ATOM    191  CA  VAL    56      18.624   6.483   8.025  1.00  0.00
ATOM    192  CB  VAL    56      17.099   6.506   7.809  1.00  0.00
ATOM    193  CG1 VAL    56      16.434   5.378   8.583  1.00  0.00
ATOM    194  CG2 VAL    56      16.514   7.827   8.285  1.00  0.00
ATOM    195  O   VAL    56      19.570   4.799   6.584  1.00  0.00
ATOM    196  C   VAL    56      19.137   5.076   7.701  1.00  0.00
ATOM    197  N   HIS    57      19.080   4.185   8.684  1.00  0.00
ATOM    198  CA  HIS    57      19.580   2.824   8.509  1.00  0.00
ATOM    199  CB  HIS    57      20.209   2.314   9.807  1.00  0.00
ATOM    200  CG  HIS    57      21.417   3.086  10.237  1.00  0.00
ATOM    201  CD2 HIS    57      21.711   4.057  11.280  1.00  0.00
ATOM    202  ND1 HIS    57      22.636   2.975   9.604  1.00  0.00
ATOM    203  CE1 HIS    57      23.521   3.785  10.213  1.00  0.00
ATOM    204  NE2 HIS    57      22.973   4.436  11.220  1.00  0.00
ATOM    205  O   HIS    57      18.770   0.588   8.166  1.00  0.00
ATOM    206  C   HIS    57      18.521   1.794   8.118  1.00  0.00
ATOM    207  N   LEU    58      17.345   2.274   7.728  1.00  0.00
ATOM    208  CA  LEU    58      16.252   1.393   7.334  1.00  0.00
ATOM    209  CB  LEU    58      15.201   1.314   8.443  1.00  0.00
ATOM    210  CG  LEU    58      14.570   2.638   8.876  1.00  0.00
ATOM    211  CD1 LEU    58      13.427   3.018   7.949  1.00  0.00
ATOM    212  CD2 LEU    58      14.021   2.535  10.290  1.00  0.00
ATOM    213  O   LEU    58      15.712   3.032   5.648  1.00  0.00
ATOM    214  C   LEU    58      15.549   1.878   6.066  1.00  0.00
ATOM    215  N   LYS    59      14.769   0.988   5.462  1.00  0.00
ATOM    216  CA  LYS    59      14.030   1.297   4.233  1.00  0.00
ATOM    217  CB  LYS    59      14.852   0.914   3.002  1.00  0.00
ATOM    218  CG  LYS    59      16.111   1.747   2.812  1.00  0.00
ATOM    219  CD  LYS    59      16.862   1.335   1.556  1.00  0.00
ATOM    220  CE  LYS    59      18.093   2.199   1.341  1.00  0.00
ATOM    221  NZ  LYS    59      18.840   1.805   0.115  1.00  0.00
ATOM    222  O   LYS    59      12.624  -0.544   4.795  1.00  0.00
ATOM    223  C   LYS    59      12.730   0.530   4.201  1.00  0.00
ATOM    224  N   PHE    60      11.747   1.081   3.496  1.00  0.00
ATOM    225  CA  PHE    60      10.469   0.406   3.330  1.00  0.00
ATOM    226  CB  PHE    60       9.342   1.427   3.159  1.00  0.00
ATOM    227  CG  PHE    60       9.043   2.213   4.403  1.00  0.00
ATOM    228  CD1 PHE    60       9.599   3.466   4.598  1.00  0.00
ATOM    229  CD2 PHE    60       8.207   1.701   5.380  1.00  0.00
ATOM    230  CE1 PHE    60       9.323   4.190   5.742  1.00  0.00
ATOM    231  CE2 PHE    60       7.932   2.426   6.524  1.00  0.00
ATOM    232  CZ  PHE    60       8.486   3.665   6.707  1.00  0.00
ATOM    233  O   PHE    60      10.988  -0.038   1.002  1.00  0.00
ATOM    234  C   PHE    60      10.564  -0.482   2.073  1.00  0.00
ATOM    235  N   GLU    61      10.172  -1.744   2.234  1.00  0.00
ATOM    236  CA  GLU    61      10.187  -2.740   1.171  1.00  0.00
ATOM    237  CB  GLU    61      11.081  -3.921   1.557  1.00  0.00
ATOM    238  CG  GLU    61      11.151  -5.016   0.505  1.00  0.00
ATOM    239  CD  GLU    61      12.077  -6.147   0.903  1.00  0.00
ATOM    240  OE1 GLU    61      12.598  -6.117   2.037  1.00  0.00
ATOM    241  OE2 GLU    61      12.284  -7.063   0.079  1.00  0.00
ATOM    242  O   GLU    61       8.003  -3.608   1.779  1.00  0.00
ATOM    243  C   GLU    61       8.794  -3.303   0.870  1.00  0.00
ATOM    244  N   LEU    62       8.511  -3.457  -0.418  1.00  0.00
ATOM    245  CA  LEU    62       7.248  -4.008  -0.878  1.00  0.00
ATOM    246  CB  LEU    62       6.837  -3.368  -2.206  1.00  0.00
ATOM    247  CG  LEU    62       5.516  -3.852  -2.809  1.00  0.00
ATOM    248  CD1 LEU    62       4.358  -3.562  -1.867  1.00  0.00
ATOM    249  CD2 LEU    62       5.240  -3.148  -4.130  1.00  0.00
ATOM    250  O   LEU    62       8.088  -5.931  -2.030  1.00  0.00
ATOM    251  C   LEU    62       7.468  -5.502  -1.052  1.00  0.00
ATOM    252  N   HIS    63       6.985  -6.296  -0.104  1.00  0.00
ATOM    253  CA  HIS    63       7.141  -7.749  -0.197  1.00  0.00
ATOM    254  CB  HIS    63       7.833  -8.294   1.054  1.00  0.00
ATOM    255  CG  HIS    63       8.094  -9.768   1.006  1.00  0.00
ATOM    256  CD2 HIS    63       7.984 -10.810  -0.005  1.00  0.00
ATOM    257  ND1 HIS    63       8.555 -10.477   2.094  1.00  0.00
ATOM    258  CE1 HIS    63       8.691 -11.770   1.746  1.00  0.00
ATOM    259  NE2 HIS    63       8.351 -11.976   0.489  1.00  0.00
ATOM    260  O   HIS    63       4.956  -8.323   0.584  1.00  0.00
ATOM    261  C   HIS    63       5.772  -8.403  -0.330  1.00  0.00
ATOM    262  N   ASP    64       5.515  -9.031  -1.477  1.00  0.00
ATOM    263  CA  ASP    64       4.240  -9.718  -1.726  1.00  0.00
ATOM    264  CB  ASP    64       4.143 -10.989  -0.881  1.00  0.00
ATOM    265  CG  ASP    64       3.053 -11.926  -1.362  1.00  0.00
ATOM    266  OD1 ASP    64       2.596 -11.766  -2.514  1.00  0.00
ATOM    267  OD2 ASP    64       2.651 -12.819  -0.586  1.00  0.00
ATOM    268  O   ASP    64       2.066  -9.385  -0.749  1.00  0.00
ATOM    269  C   ASP    64       2.994  -8.891  -1.401  1.00  0.00
ATOM    270  N   LYS    65       2.972  -7.640  -1.846  1.00  0.00
ATOM    271  CA  LYS    65       1.814  -6.804  -1.588  1.00  0.00
ATOM    272  CB  LYS    65       0.522  -7.599  -1.788  1.00  0.00
ATOM    273  CG  LYS    65       0.296  -8.064  -3.218  1.00  0.00
ATOM    274  CD  LYS    65      -1.018  -8.817  -3.352  1.00  0.00
ATOM    275  CE  LYS    65      -1.233  -9.303  -4.775  1.00  0.00
ATOM    276  NZ  LYS    65      -2.560  -9.957  -4.945  1.00  0.00
ATOM    277  O   LYS    65       0.722  -5.559   0.124  1.00  0.00
ATOM    278  C   LYS    65       1.716  -6.215  -0.191  1.00  0.00
ATOM    279  N   LEU    66       2.722  -6.456   0.650  1.00  0.00
ATOM    280  CA  LEU    66       2.727  -5.906   1.995  1.00  0.00
ATOM    281  CB  LEU    66       2.698  -7.030   3.033  1.00  0.00
ATOM    282  CG  LEU    66       1.481  -7.957   2.995  1.00  0.00
ATOM    283  CD1 LEU    66       1.644  -9.100   3.984  1.00  0.00
ATOM    284  CD2 LEU    66       0.213  -7.196   3.350  1.00  0.00
ATOM    285  O   LEU    66       5.091  -5.543   1.960  1.00  0.00
ATOM    286  C   LEU    66       3.981  -5.073   2.221  1.00  0.00
ATOM    287  N   VAL    71       3.826  -3.833   2.681  1.00  0.00
ATOM    288  CA  VAL    71       4.994  -2.987   2.932  1.00  0.00
ATOM    289  CB  VAL    71       4.677  -1.500   2.684  1.00  0.00
ATOM    290  CG1 VAL    71       5.873  -0.634   3.048  1.00  0.00
ATOM    291  CG2 VAL    71       4.338  -1.265   1.221  1.00  0.00
ATOM    292  O   VAL    71       4.674  -3.198   5.292  1.00  0.00
ATOM    293  C   VAL    71       5.479  -3.115   4.369  1.00  0.00
ATOM    294  N   LYS    72       6.794  -3.140   4.557  1.00  0.00
ATOM    295  CA  LYS    72       7.363  -3.194   5.909  1.00  0.00
ATOM    296  CB  LYS    72       7.439  -4.642   6.401  1.00  0.00
ATOM    297  CG  LYS    72       8.383  -5.522   5.596  1.00  0.00
ATOM    298  CD  LYS    72       8.395  -6.946   6.124  1.00  0.00
ATOM    299  CE  LYS    72       9.345  -7.823   5.327  1.00  0.00
ATOM    300  NZ  LYS    72       9.410  -9.208   5.869  1.00  0.00
ATOM    301  O   LYS    72       9.428  -2.571   4.862  1.00  0.00
ATOM    302  C   LYS    72       8.767  -2.604   5.899  1.00  0.00
ATOM    303  N   VAL    73       9.206  -2.127   7.056  1.00  0.00
ATOM    304  CA  VAL    73      10.544  -1.577   7.210  1.00  0.00
ATOM    305  CB  VAL    73      10.632  -0.643   8.432  1.00  0.00
ATOM    306  CG1 VAL    73      12.071  -0.209   8.668  1.00  0.00
ATOM    307  CG2 VAL    73       9.784   0.601   8.214  1.00  0.00
ATOM    308  O   VAL    73      11.165  -3.754   7.971  1.00  0.00
ATOM    309  C   VAL    73      11.516  -2.722   7.396  1.00  0.00
ATOM    310  N   ILE    74      12.734  -2.537   6.907  1.00  0.00
ATOM    311  CA  ILE    74      13.810  -3.521   7.059  1.00  0.00
ATOM    312  CB  ILE    74      13.911  -4.440   5.827  1.00  0.00
ATOM    313  CG1 ILE    74      14.951  -5.537   6.067  1.00  0.00
ATOM    314  CG2 ILE    74      14.326  -3.642   4.601  1.00  0.00
ATOM    315  CD1 ILE    74      14.913  -6.648   5.038  1.00  0.00
ATOM    316  O   ILE    74      15.233  -1.648   6.621  1.00  0.00
ATOM    317  C   ILE    74      15.097  -2.712   7.226  1.00  0.00
ATOM    318  N   GLU    75      16.027  -3.183   8.055  1.00  0.00
ATOM    319  CA  GLU    75      17.284  -2.449   8.225  1.00  0.00
ATOM    320  CB  GLU    75      17.975  -2.865   9.524  1.00  0.00
ATOM    321  CG  GLU    75      17.199  -2.510  10.782  1.00  0.00
ATOM    322  CD  GLU    75      17.935  -2.898  12.049  1.00  0.00
ATOM    323  OE1 GLU    75      19.030  -3.491  11.943  1.00  0.00
ATOM    324  OE2 GLU    75      17.419  -2.610  13.149  1.00  0.00
ATOM    325  O   GLU    75      18.084  -3.826   6.424  1.00  0.00
ATOM    326  C   GLU    75      18.197  -2.764   7.038  1.00  0.00
ATOM    327  N   ASP    76      19.086  -1.830   6.725  1.00  0.00
ATOM    328  CA  ASP    76      20.015  -1.953   5.611  1.00  0.00
ATOM    329  CB  ASP    76      20.837  -0.673   5.454  1.00  0.00
ATOM    330  CG  ASP    76      20.025   0.476   4.888  1.00  0.00
ATOM    331  OD1 ASP    76      18.886   0.232   4.435  1.00  0.00
ATOM    332  OD2 ASP    76      20.527   1.619   4.897  1.00  0.00
ATOM    333  O   ASP    76      21.490  -3.380   6.872  1.00  0.00
ATOM    334  C   ASP    76      21.011  -3.104   5.773  1.00  0.00
ATOM    335  N   SER    77      21.343  -3.788   4.663  1.00  0.00
ATOM    336  CA  SER    77      22.286  -4.914   4.695  1.00  0.00
ATOM    337  CB  SER    77      22.567  -5.418   3.277  1.00  0.00
ATOM    338  OG  SER    77      21.389  -5.924   2.673  1.00  0.00
ATOM    339  O   SER    77      24.367  -5.434   5.747  1.00  0.00
ATOM    340  C   SER    77      23.622  -4.560   5.307  1.00  0.00
ATOM    344  N   PRO    87      17.811 -23.293  20.239  1.00  0.00
ATOM    345  CA  PRO    87      16.708 -23.451  19.297  1.00  0.00
ATOM    346  CB  PRO    87      16.732 -22.158  18.479  1.00  0.00
ATOM    347  CG  PRO    87      17.290 -21.137  19.412  1.00  0.00
ATOM    348  CD  PRO    87      18.380 -21.827  20.182  1.00  0.00
ATOM    349  O   PRO    87      15.952 -25.483  18.237  1.00  0.00
ATOM    350  C   PRO    87      16.870 -24.673  18.380  1.00  0.00
ATOM    351  N   LYS    88      18.035 -24.801  17.750  1.00  0.00
ATOM    352  CA  LYS    88      18.274 -25.909  16.836  1.00  0.00
ATOM    353  CB  LYS    88      19.673 -25.808  16.224  1.00  0.00
ATOM    354  CG  LYS    88      19.992 -26.904  15.223  1.00  0.00
ATOM    355  CD  LYS    88      21.367 -26.704  14.604  1.00  0.00
ATOM    356  CE  LYS    88      21.708 -27.829  13.639  1.00  0.00
ATOM    357  NZ  LYS    88      23.061 -27.657  13.042  1.00  0.00
ATOM    358  O   LYS    88      17.501 -28.176  17.030  1.00  0.00
ATOM    359  C   LYS    88      18.176 -27.269  17.520  1.00  0.00
ATOM    360  N   ARG    89      18.855 -27.410  18.651  1.00  0.00
ATOM    361  CA  ARG    89      18.847 -28.673  19.363  1.00  0.00
ATOM    362  CB  ARG    89      19.696 -28.578  20.633  1.00  0.00
ATOM    363  CG  ARG    89      21.190 -28.485  20.376  1.00  0.00
ATOM    364  CD  ARG    89      21.967 -28.347  21.675  1.00  0.00
ATOM    365  NE  ARG    89      23.402 -28.208  21.442  1.00  0.00
ATOM    366  CZ  ARG    89      24.300 -28.017  22.403  1.00  0.00
ATOM    367  NH1 ARG    89      25.585 -27.902  22.097  1.00  0.00
ATOM    368  NH2 ARG    89      23.910 -27.939  23.668  1.00  0.00
ATOM    369  O   ARG    89      17.018 -30.196  19.539  1.00  0.00
ATOM    370  C   ARG    89      17.430 -29.061  19.764  1.00  0.00
ATOM    371  N   TRP    90      16.668 -28.127  20.330  1.00  0.00
ATOM    372  CA  TRP    90      15.307 -28.455  20.720  1.00  0.00
ATOM    373  CB  TRP    90      14.624 -27.242  21.356  1.00  0.00
ATOM    374  CG  TRP    90      13.219 -27.508  21.800  1.00  0.00
ATOM    375  CD1 TRP    90      12.824 -28.040  22.993  1.00  0.00
ATOM    376  CD2 TRP    90      12.021 -27.255  21.056  1.00  0.00
ATOM    377  CE2 TRP    90      10.938 -27.659  21.862  1.00  0.00
ATOM    378  CE3 TRP    90      11.758 -26.727  19.789  1.00  0.00
ATOM    379  NE1 TRP    90      11.455 -28.135  23.040  1.00  0.00
ATOM    380  CZ2 TRP    90       9.613 -27.551  21.440  1.00  0.00
ATOM    381  CZ3 TRP    90      10.443 -26.621  19.375  1.00  0.00
ATOM    382  CH2 TRP    90       9.386 -27.031  20.196  1.00  0.00
ATOM    383  O   TRP    90      13.705 -29.854  19.609  1.00  0.00
ATOM    384  C   TRP    90      14.470 -28.888  19.524  1.00  0.00
ATOM    385  N   LEU    91      14.622 -28.179  18.409  1.00  0.00
ATOM    386  CA  LEU    91      13.871 -28.499  17.203  1.00  0.00
ATOM    387  CB  LEU    91      14.121 -27.446  16.121  1.00  0.00
ATOM    388  CG  LEU    91      13.544 -26.054  16.382  1.00  0.00
ATOM    389  CD1 LEU    91      14.015 -25.068  15.324  1.00  0.00
ATOM    390  CD2 LEU    91      12.024 -26.088  16.356  1.00  0.00
ATOM    391  O   LEU    91      13.348 -30.615  16.188  1.00  0.00
ATOM    392  C   LEU    91      14.235 -29.855  16.592  1.00  0.00
ATOM    393  N   ASP    92      15.534 -30.152  16.517  1.00  0.00
ATOM    394  CA  ASP    92      16.002 -31.435  15.964  1.00  0.00
ATOM    395  CB  ASP    92      17.531 -31.478  15.929  1.00  0.00
ATOM    396  CG  ASP    92      18.115 -30.581  14.856  1.00  0.00
ATOM    397  OD1 ASP    92      17.347 -30.115  13.988  1.00  0.00
ATOM    398  OD2 ASP    92      19.341 -30.346  14.882  1.00  0.00
ATOM    399  O   ASP    92      15.051 -33.625  16.257  1.00  0.00
ATOM    400  C   ASP    92      15.519 -32.631  16.804  1.00  0.00
ATOM    401  N   PHE    93      15.645 -32.527  18.122  1.00  0.00
ATOM    402  CA  PHE    93      15.199 -33.612  18.976  1.00  0.00
ATOM    403  CB  PHE    93      15.536 -33.316  20.439  1.00  0.00
ATOM    404  CG  PHE    93      15.099 -34.393  21.391  1.00  0.00
ATOM    405  CD1 PHE    93      15.840 -35.553  21.534  1.00  0.00
ATOM    406  CD2 PHE    93      13.947 -34.244  22.144  1.00  0.00
ATOM    407  CE1 PHE    93      15.438 -36.541  22.411  1.00  0.00
ATOM    408  CE2 PHE    93      13.546 -35.234  23.020  1.00  0.00
ATOM    409  CZ  PHE    93      14.286 -36.380  23.156  1.00  0.00
ATOM    410  O   PHE    93      13.145 -34.864  18.653  1.00  0.00
ATOM    411  C   PHE    93      13.665 -33.755  18.814  1.00  0.00
ATOM    412  N   TYR    94      12.949 -32.632  18.823  1.00  0.00
ATOM    413  CA  TYR    94      11.499 -32.643  18.640  1.00  0.00
ATOM    414  CB  TYR    94      10.954 -31.214  18.595  1.00  0.00
ATOM    415  CG  TYR    94       9.459 -31.137  18.377  1.00  0.00
ATOM    416  CD1 TYR    94       8.576 -31.370  19.423  1.00  0.00
ATOM    417  CD2 TYR    94       8.936 -30.828  17.128  1.00  0.00
ATOM    418  CE1 TYR    94       7.208 -31.301  19.235  1.00  0.00
ATOM    419  CE2 TYR    94       7.573 -30.754  16.921  1.00  0.00
ATOM    420  CZ  TYR    94       6.708 -30.993  17.988  1.00  0.00
ATOM    421  OH  TYR    94       5.347 -30.924  17.798  1.00  0.00
ATOM    422  O   TYR    94      10.161 -34.097  17.264  1.00  0.00
ATOM    423  C   TYR    94      11.132 -33.342  17.336  1.00  0.00
ATOM    424  N   ALA    95      11.904 -33.050  16.294  1.00  0.00
ATOM    425  CA  ALA    95      11.705 -33.627  14.974  1.00  0.00
ATOM    426  CB  ALA    95      12.691 -33.031  13.980  1.00  0.00
ATOM    427  O   ALA    95      11.146 -35.880  14.399  1.00  0.00
ATOM    428  C   ALA    95      11.911 -35.139  15.009  1.00  0.00
ATOM    429  N   ALA    96      12.953 -35.586  15.712  1.00  0.00
ATOM    430  CA  ALA    96      13.253 -37.012  15.836  1.00  0.00
ATOM    431  CB  ALA    96      14.541 -37.218  16.618  1.00  0.00
ATOM    432  O   ALA    96      11.706 -38.831  16.185  1.00  0.00
ATOM    433  C   ALA    96      12.114 -37.732  16.570  1.00  0.00
ATOM    434  N   MET    97      11.601 -37.105  17.622  1.00  0.00
ATOM    435  CA  MET    97      10.481 -37.689  18.370  1.00  0.00
ATOM    436  CB  MET    97      10.156 -36.838  19.599  1.00  0.00
ATOM    437  CG  MET    97       8.990 -37.359  20.425  1.00  0.00
ATOM    438  SD  MET    97       8.596 -36.292  21.824  1.00  0.00
ATOM    439  CE  MET    97       7.852 -34.895  20.986  1.00  0.00
ATOM    440  O   MET    97       8.543 -38.801  17.421  1.00  0.00
ATOM    441  C   MET    97       9.226 -37.764  17.487  1.00  0.00
ATOM    442  N   THR    98       8.943 -36.671  16.788  1.00  0.00
ATOM    443  CA  THR    98       7.783 -36.628  15.911  1.00  0.00
ATOM    444  CB  THR    98       7.720 -35.305  15.124  1.00  0.00
ATOM    445  CG2 THR    98       6.523 -35.300  14.186  1.00  0.00
ATOM    446  OG1 THR    98       7.600 -34.207  16.037  1.00  0.00
ATOM    447  O   THR    98       6.807 -38.391  14.633  1.00  0.00
ATOM    448  C   THR    98       7.830 -37.758  14.913  1.00  0.00
ATOM    449  N   GLU    99       9.014 -38.036  14.377  1.00  0.00
ATOM    450  CA  GLU    99       9.120 -39.090  13.377  1.00  0.00
ATOM    451  CB  GLU    99      10.328 -38.849  12.470  1.00  0.00
ATOM    452  CG  GLU    99      10.222 -37.595  11.616  1.00  0.00
ATOM    453  CD  GLU    99      11.456 -37.365  10.765  1.00  0.00
ATOM    454  OE1 GLU    99      12.409 -38.166  10.870  1.00  0.00
ATOM    455  OE2 GLU    99      11.470 -36.383   9.993  1.00  0.00
ATOM    456  O   GLU    99       8.655 -41.431  13.376  1.00  0.00
ATOM    457  C   GLU    99       9.291 -40.520  13.891  1.00  0.00
ATOM    458  N   PHE   100      10.115 -40.700  14.918  1.00  0.00
ATOM    459  CA  PHE   100      10.405 -42.031  15.447  1.00  0.00
ATOM    460  CB  PHE   100      11.866 -42.125  15.890  1.00  0.00
ATOM    461  CG  PHE   100      12.850 -42.012  14.760  1.00  0.00
ATOM    462  CD1 PHE   100      13.523 -40.825  14.526  1.00  0.00
ATOM    463  CD2 PHE   100      13.102 -43.091  13.932  1.00  0.00
ATOM    464  CE1 PHE   100      14.428 -40.721  13.487  1.00  0.00
ATOM    465  CE2 PHE   100      14.007 -42.987  12.893  1.00  0.00
ATOM    466  CZ  PHE   100      14.668 -41.809  12.669  1.00  0.00
ATOM    467  O   PHE   100       9.786 -43.665  17.085  1.00  0.00
ATOM    468  C   PHE   100       9.611 -42.526  16.667  1.00  0.00
ATOM    469  N   LEU   101      15.729 -42.037  24.852  1.00  0.00
ATOM    470  CA  LEU   101      16.854 -41.118  24.784  1.00  0.00
ATOM    471  CB  LEU   101      17.298 -40.710  26.190  1.00  0.00
ATOM    472  CG  LEU   101      16.336 -39.812  26.971  1.00  0.00
ATOM    473  CD1 LEU   101      16.812 -39.634  28.405  1.00  0.00
ATOM    474  CD2 LEU   101      16.241 -38.438  26.327  1.00  0.00
ATOM    475  O   LEU   101      18.695 -41.202  23.237  1.00  0.00
ATOM    476  C   LEU   101      18.019 -41.806  24.071  1.00  0.00
ATOM    477  N   GLY   102      18.263 -43.067  24.408  1.00  0.00
ATOM    478  CA  GLY   102      19.348 -43.786  23.768  1.00  0.00
ATOM    479  O   GLY   102      20.109 -43.637  21.498  1.00  0.00
ATOM    480  C   GLY   102      19.165 -43.840  22.264  1.00  0.00
ATOM    481  N   LEU   103      17.936 -44.117  21.842  1.00  0.00
ATOM    482  CA  LEU   103      17.615 -44.199  20.437  1.00  0.00
ATOM    483  CB  LEU   103      16.169 -44.662  20.244  1.00  0.00
ATOM    484  CG  LEU   103      15.863 -46.110  20.628  1.00  0.00
ATOM    485  CD1 LEU   103      14.368 -46.381  20.558  1.00  0.00
ATOM    486  CD2 LEU   103      16.567 -47.076  19.687  1.00  0.00
ATOM    487  O   LEU   103      18.335 -42.756  18.657  1.00  0.00
ATOM    488  C   LEU   103      17.772 -42.842  19.747  1.00  0.00
ATOM    489  N   PHE   104      17.300 -41.779  20.392  1.00  0.00
ATOM    490  CA  PHE   104      17.411 -40.438  19.812  1.00  0.00
ATOM    491  CB  PHE   104      16.792 -39.397  20.747  1.00  0.00
ATOM    492  CG  PHE   104      15.308 -39.545  20.922  1.00  0.00
ATOM    493  CD1 PHE   104      14.788 -40.189  22.032  1.00  0.00
ATOM    494  CD2 PHE   104      14.431 -39.041  19.977  1.00  0.00
ATOM    495  CE1 PHE   104      13.422 -40.325  22.194  1.00  0.00
ATOM    496  CE2 PHE   104      13.065 -39.178  20.139  1.00  0.00
ATOM    497  CZ  PHE   104      12.560 -39.817  21.240  1.00  0.00
ATOM    498  O   PHE   104      19.292 -39.576  18.563  1.00  0.00
ATOM    499  C   PHE   104      18.889 -40.116  19.602  1.00  0.00
TER
END



