
PFRMAT TS
TARGET T0350
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0350 model 5 Wed Jun 28 13:53:44 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  5
PARENT N/A
ATOM      2  N   VAL    35       1.226  -5.384  -5.892  1.00  0.00
ATOM      3  CA  VAL    35       0.969  -4.296  -4.968  1.00  0.00
ATOM      4  CB  VAL    35       2.200  -3.998  -4.090  1.00  0.00
ATOM      5  CG1 VAL    35       1.998  -2.707  -3.311  1.00  0.00
ATOM      6  CG2 VAL    35       2.432  -5.127  -3.098  1.00  0.00
ATOM      7  O   VAL    35       1.135  -2.861  -6.869  1.00  0.00
ATOM      8  C   VAL    35       0.621  -3.049  -5.776  1.00  0.00
ATOM      9  N   SER    36      -0.267  -2.219  -5.225  1.00  0.00
ATOM     10  CA  SER    36      -0.659  -0.941  -5.828  1.00  0.00
ATOM     11  CB  SER    36      -1.702  -0.237  -4.960  1.00  0.00
ATOM     12  OG  SER    36      -2.054   1.023  -5.505  1.00  0.00
ATOM     13  O   SER    36       1.368   0.098  -5.055  1.00  0.00
ATOM     14  C   SER    36       0.568  -0.019  -5.967  1.00  0.00
ATOM     15  N   TYR    37       0.741   0.591  -7.135  1.00  0.00
ATOM     16  CA  TYR    37       1.842   1.540  -7.341  1.00  0.00
ATOM     17  CB  TYR    37       1.848   2.048  -8.784  1.00  0.00
ATOM     18  CG  TYR    37       2.351   1.037  -9.788  1.00  0.00
ATOM     19  CD1 TYR    37       1.466   0.333 -10.595  1.00  0.00
ATOM     20  CD2 TYR    37       3.711   0.788  -9.926  1.00  0.00
ATOM     21  CE1 TYR    37       1.917  -0.593 -11.516  1.00  0.00
ATOM     22  CE2 TYR    37       4.180  -0.135 -10.841  1.00  0.00
ATOM     23  CZ  TYR    37       3.270  -0.826 -11.638  1.00  0.00
ATOM     24  OH  TYR    37       3.722  -1.750 -12.554  1.00  0.00
ATOM     25  O   TYR    37       2.702   3.181  -5.795  1.00  0.00
ATOM     26  C   TYR    37       1.729   2.777  -6.409  1.00  0.00
ATOM     27  N   THR    38       0.543   3.370  -6.328  1.00  0.00
ATOM     28  CA  THR    38       0.256   4.456  -5.363  1.00  0.00
ATOM     29  CB  THR    38      -1.216   4.903  -5.438  1.00  0.00
ATOM     30  CG2 THR    38      -1.496   5.990  -4.410  1.00  0.00
ATOM     31  OG1 THR    38      -1.496   5.419  -6.745  1.00  0.00
ATOM     32  O   THR    38       1.150   4.783  -3.178  1.00  0.00
ATOM     33  C   THR    38       0.519   4.040  -3.908  1.00  0.00
ATOM     34  N   ASN    39       0.058   2.855  -3.526  1.00  0.00
ATOM     35  CA  ASN    39       0.208   2.266  -2.155  1.00  0.00
ATOM     36  CB  ASN    39      -0.430   0.876  -2.096  1.00  0.00
ATOM     37  CG  ASN    39      -0.387   0.274  -0.705  1.00  0.00
ATOM     38  ND2 ASN    39       0.328  -0.837  -0.564  1.00  0.00
ATOM     39  OD1 ASN    39      -0.990   0.801   0.229  1.00  0.00
ATOM     40  O   ASN    39       2.097   2.562  -0.657  1.00  0.00
ATOM     41  C   ASN    39       1.669   2.106  -1.724  1.00  0.00
ATOM     42  N   LEU    40       2.460   1.524  -2.597  1.00  0.00
ATOM     43  CA  LEU    40       3.882   1.394  -2.334  1.00  0.00
ATOM     44  CB  LEU    40       4.540   0.491  -3.379  1.00  0.00
ATOM     45  CG  LEU    40       4.165  -0.991  -3.328  1.00  0.00
ATOM     46  CD1 LEU    40       4.743  -1.734  -4.522  1.00  0.00
ATOM     47  CD2 LEU    40       4.703  -1.637  -2.060  1.00  0.00
ATOM     48  O   LEU    40       5.521   2.945  -1.558  1.00  0.00
ATOM     49  C   LEU    40       4.618   2.730  -2.367  1.00  0.00
ATOM     50  N   ALA    41       4.311   3.589  -3.339  1.00  0.00
ATOM     51  CA  ALA    41       4.902   4.950  -3.382  1.00  0.00
ATOM     52  CB  ALA    41       4.288   5.757  -4.516  1.00  0.00
ATOM     53  O   ALA    41       5.558   6.311  -1.513  1.00  0.00
ATOM     54  C   ALA    41       4.654   5.698  -2.078  1.00  0.00
ATOM     55  N   GLU    42       3.436   5.616  -1.560  1.00  0.00
ATOM     56  CA  GLU    42       3.111   6.296  -0.325  1.00  0.00
ATOM     57  CB  GLU    42       1.608   6.213  -0.048  1.00  0.00
ATOM     58  CG  GLU    42       0.756   7.038  -0.996  1.00  0.00
ATOM     59  CD  GLU    42      -0.731   6.835  -0.771  1.00  0.00
ATOM     60  OE1 GLU    42      -1.093   5.995   0.078  1.00  0.00
ATOM     61  OE2 GLU    42      -1.532   7.518  -1.443  1.00  0.00
ATOM     62  O   GLU    42       4.266   6.371   1.798  1.00  0.00
ATOM     63  C   GLU    42       3.837   5.685   0.877  1.00  0.00
ATOM     64  N   MET    43       3.975   4.379   0.875  1.00  0.00
ATOM     65  CA  MET    43       4.694   3.663   1.937  1.00  0.00
ATOM     66  CB  MET    43       4.549   2.150   1.756  1.00  0.00
ATOM     67  CG  MET    43       3.146   1.627   2.017  1.00  0.00
ATOM     68  SD  MET    43       2.991  -0.139   1.692  1.00  0.00
ATOM     69  CE  MET    43       3.935  -0.819   3.054  1.00  0.00
ATOM     70  O   MET    43       6.764   4.284   2.929  1.00  0.00
ATOM     71  C   MET    43       6.153   4.022   1.886  1.00  0.00
ATOM     72  N   VAL    44       6.733   4.026   0.672  1.00  0.00
ATOM     73  CA  VAL    44       8.143   4.453   0.519  1.00  0.00
ATOM     74  CB  VAL    44       8.583   4.430  -0.957  1.00  0.00
ATOM     75  CG1 VAL    44       9.960   5.057  -1.112  1.00  0.00
ATOM     76  CG2 VAL    44       8.646   2.999  -1.471  1.00  0.00
ATOM     77  O   VAL    44       9.317   6.142   1.783  1.00  0.00
ATOM     78  C   VAL    44       8.368   5.873   1.032  1.00  0.00
ATOM     79  N   GLY    45       7.461   6.783   0.699  1.00  0.00
ATOM     80  CA  GLY    45       7.556   8.141   1.236  1.00  0.00
ATOM     81  O   GLY    45       8.338   8.960   3.395  1.00  0.00
ATOM     82  C   GLY    45       7.567   8.199   2.789  1.00  0.00
ATOM     83  N   GLU    46       6.723   7.392   3.423  1.00  0.00
ATOM     84  CA  GLU    46       6.668   7.332   4.892  1.00  0.00
ATOM     85  CB  GLU    46       5.572   6.369   5.350  1.00  0.00
ATOM     86  CG  GLU    46       4.159   6.876   5.105  1.00  0.00
ATOM     87  CD  GLU    46       3.102   5.843   5.442  1.00  0.00
ATOM     88  OE1 GLU    46       3.477   4.703   5.789  1.00  0.00
ATOM     89  OE2 GLU    46       1.900   6.173   5.359  1.00  0.00
ATOM     90  O   GLU    46       8.523   7.459   6.407  1.00  0.00
ATOM     91  C   GLU    46       8.004   6.846   5.478  1.00  0.00
ATOM     92  N   MET    47       8.585   5.780   4.933  1.00  0.00
ATOM     93  CA  MET    47       9.782   5.234   5.522  1.00  0.00
ATOM     94  CB  MET    47      10.052   3.827   4.983  1.00  0.00
ATOM     95  CG  MET    47       9.010   2.798   5.384  1.00  0.00
ATOM     96  SD  MET    47       8.903   2.575   7.171  1.00  0.00
ATOM     97  CE  MET    47       7.528   3.654   7.565  1.00  0.00
ATOM     98  O   MET    47      11.947   6.072   5.968  1.00  0.00
ATOM     99  C   MET    47      11.001   6.091   5.217  1.00  0.00
ATOM    100  N   ASN    48      10.944   6.868   4.140  1.00  0.00
ATOM    101  CA  ASN    48      12.005   7.800   3.792  1.00  0.00
ATOM    102  CB  ASN    48      11.747   8.418   2.417  1.00  0.00
ATOM    103  CG  ASN    48      11.970   7.436   1.284  1.00  0.00
ATOM    104  ND2 ASN    48      11.386   7.726   0.128  1.00  0.00
ATOM    105  OD1 ASN    48      12.660   6.428   1.450  1.00  0.00
ATOM    106  O   ASN    48      13.209   9.525   4.876  1.00  0.00
ATOM    107  C   ASN    48      12.141   8.929   4.759  1.00  0.00
ATOM    108  N   LYS    49      11.095   9.207   5.504  1.00  0.00
ATOM    109  CA  LYS    49      11.222  10.152   6.595  1.00  0.00
ATOM    110  CB  LYS    49       9.947  10.167   7.442  1.00  0.00
ATOM    111  CG  LYS    49       9.981  11.156   8.595  1.00  0.00
ATOM    112  CD  LYS    49       8.660  11.174   9.346  1.00  0.00
ATOM    113  CE  LYS    49       8.703  12.139  10.519  1.00  0.00
ATOM    114  NZ  LYS    49       7.413  12.170  11.262  1.00  0.00
ATOM    115  O   LYS    49      13.170  10.604   7.931  1.00  0.00
ATOM    116  C   LYS    49      12.415   9.747   7.489  1.00  0.00
ATOM    117  N   LEU    50      12.577   8.444   7.739  1.00  0.00
ATOM    118  CA  LEU    50      13.683   7.939   8.555  1.00  0.00
ATOM    119  CB  LEU    50      13.251   6.697   9.336  1.00  0.00
ATOM    120  CG  LEU    50      14.299   6.076  10.259  1.00  0.00
ATOM    121  CD1 LEU    50      14.704   7.058  11.349  1.00  0.00
ATOM    122  CD2 LEU    50      13.755   4.824  10.927  1.00  0.00
ATOM    123  O   LEU    50      16.014   7.837   8.085  1.00  0.00
ATOM    124  C   LEU    50      14.897   7.553   7.701  1.00  0.00
ATOM    125  N   LEU    51      14.660   6.945   6.537  1.00  0.00
ATOM    126  CA  LEU    51      15.761   6.493   5.691  1.00  0.00
ATOM    127  CB  LEU    51      15.223   5.792   4.442  1.00  0.00
ATOM    128  CG  LEU    51      14.551   4.435   4.663  1.00  0.00
ATOM    129  CD1 LEU    51      13.907   3.938   3.378  1.00  0.00
ATOM    130  CD2 LEU    51      15.567   3.398   5.117  1.00  0.00
ATOM    131  O   LEU    51      17.916   7.464   5.108  1.00  0.00
ATOM    132  C   LEU    51      16.675   7.638   5.200  1.00  0.00
ATOM    133  N   GLU    52      16.081   8.797   4.929  1.00  0.00
ATOM    134  CA  GLU    52      16.824   9.959   4.424  1.00  0.00
ATOM    135  CB  GLU    52      15.859  11.066   3.996  1.00  0.00
ATOM    136  CG  GLU    52      15.054  10.741   2.747  1.00  0.00
ATOM    137  CD  GLU    52      14.059  11.828   2.394  1.00  0.00
ATOM    138  OE1 GLU    52      13.969  12.819   3.150  1.00  0.00
ATOM    139  OE2 GLU    52      13.368  11.691   1.363  1.00  0.00
ATOM    140  O   GLU    52      18.668  11.310   5.087  1.00  0.00
ATOM    141  C   GLU    52      17.751  10.551   5.443  1.00  0.00
ATOM    142  N   PRO    53      17.531  10.203   6.710  1.00  0.00
ATOM    143  CA  PRO    53      18.395  10.659   7.771  1.00  0.00
ATOM    144  CB  PRO    53      17.663  10.246   9.049  1.00  0.00
ATOM    145  CG  PRO    53      16.238  10.097   8.630  1.00  0.00
ATOM    146  CD  PRO    53      16.268   9.603   7.212  1.00  0.00
ATOM    147  O   PRO    53      20.735  10.655   8.219  1.00  0.00
ATOM    148  C   PRO    53      19.796  10.039   7.738  1.00  0.00
ATOM    149  N   SER    54      19.956   8.848   7.182  1.00  0.00
ATOM    150  CA  SER    54      21.292   8.300   7.043  1.00  0.00
ATOM    151  CB  SER    54      21.999   8.263   8.398  1.00  0.00
ATOM    152  OG  SER    54      23.275   7.656   8.291  1.00  0.00
ATOM    153  O   SER    54      22.280   6.599   5.707  1.00  0.00
ATOM    154  C   SER    54      21.390   6.898   6.508  1.00  0.00
ATOM    155  N   GLN    55      20.489   6.020   6.940  1.00  0.00
ATOM    156  CA  GLN    55      20.573   4.612   6.542  1.00  0.00
ATOM    157  CB  GLN    55      19.470   3.797   7.221  1.00  0.00
ATOM    158  CG  GLN    55      19.580   2.298   6.998  1.00  0.00
ATOM    159  CD  GLN    55      20.853   1.714   7.579  1.00  0.00
ATOM    160  OE1 GLN    55      21.231   2.027   8.708  1.00  0.00
ATOM    161  NE2 GLN    55      21.517   0.862   6.807  1.00  0.00
ATOM    162  O   GLN    55      21.071   3.570   4.452  1.00  0.00
ATOM    163  C   GLN    55      20.418   4.446   5.041  1.00  0.00
ATOM    164  N   VAL    56      19.589   5.292   4.421  1.00  0.00
ATOM    165  CA  VAL    56      19.259   5.171   2.971  1.00  0.00
ATOM    166  CB  VAL    56      20.456   5.563   2.086  1.00  0.00
ATOM    167  CG1 VAL    56      20.013   5.745   0.642  1.00  0.00
ATOM    168  CG2 VAL    56      21.071   6.868   2.567  1.00  0.00
ATOM    169  O   VAL    56      19.293   3.167   1.599  1.00  0.00
ATOM    170  C   VAL    56      18.874   3.741   2.629  1.00  0.00
ATOM    171  N   HIS    57      18.066   3.154   3.504  1.00  0.00
ATOM    172  CA  HIS    57      17.739   1.729   3.406  1.00  0.00
ATOM    173  CB  HIS    57      18.675   0.903   4.292  1.00  0.00
ATOM    174  CG  HIS    57      18.467  -0.576   4.177  1.00  0.00
ATOM    175  CD2 HIS    57      17.881  -1.610   5.017  1.00  0.00
ATOM    176  ND1 HIS    57      18.866  -1.301   3.076  1.00  0.00
ATOM    177  CE1 HIS    57      18.547  -2.593   3.263  1.00  0.00
ATOM    178  NE2 HIS    57      17.956  -2.786   4.426  1.00  0.00
ATOM    179  O   HIS    57      15.892   2.070   4.794  1.00  0.00
ATOM    180  C   HIS    57      16.325   1.466   3.848  1.00  0.00
ATOM    181  N   LEU    58      15.614   0.589   3.133  1.00  0.00
ATOM    182  CA  LEU    58      14.357   0.037   3.577  1.00  0.00
ATOM    183  CB  LEU    58      13.215   0.514   2.677  1.00  0.00
ATOM    184  CG  LEU    58      11.826  -0.045   2.991  1.00  0.00
ATOM    185  CD1 LEU    58      11.332   0.464   4.337  1.00  0.00
ATOM    186  CD2 LEU    58      10.823   0.376   1.928  1.00  0.00
ATOM    187  O   LEU    58      14.969  -2.008   2.510  1.00  0.00
ATOM    188  C   LEU    58      14.493  -1.482   3.501  1.00  0.00
ATOM    189  N   LYS    59      14.130  -2.147   4.588  1.00  0.00
ATOM    190  CA  LYS    59      13.988  -3.603   4.664  1.00  0.00
ATOM    191  CB  LYS    59      14.413  -4.111   6.044  1.00  0.00
ATOM    192  CG  LYS    59      14.404  -5.626   6.177  1.00  0.00
ATOM    193  CD  LYS    59      14.803  -6.059   7.578  1.00  0.00
ATOM    194  CE  LYS    59      14.805  -7.574   7.708  1.00  0.00
ATOM    195  NZ  LYS    59      15.198  -8.013   9.075  1.00  0.00
ATOM    196  O   LYS    59      11.608  -3.449   5.087  1.00  0.00
ATOM    197  C   LYS    59      12.529  -3.975   4.421  1.00  0.00
ATOM    198  N   PHE    60      12.333  -4.852   3.430  1.00  0.00
ATOM    199  CA  PHE    60      11.050  -5.453   3.131  1.00  0.00
ATOM    200  CB  PHE    60      10.885  -5.644   1.622  1.00  0.00
ATOM    201  CG  PHE    60      10.781  -4.355   0.856  1.00  0.00
ATOM    202  CD1 PHE    60      11.911  -3.750   0.337  1.00  0.00
ATOM    203  CD2 PHE    60       9.553  -3.750   0.655  1.00  0.00
ATOM    204  CE1 PHE    60      11.816  -2.565  -0.368  1.00  0.00
ATOM    205  CE2 PHE    60       9.457  -2.565  -0.049  1.00  0.00
ATOM    206  CZ  PHE    60      10.582  -1.972  -0.560  1.00  0.00
ATOM    207  O   PHE    60      11.916  -7.596   3.650  1.00  0.00
ATOM    208  C   PHE    60      11.006  -6.788   3.828  1.00  0.00
ATOM    209  N   GLU    61       9.972  -6.975   4.648  1.00  0.00
ATOM    210  CA  GLU    61       9.622  -8.234   5.289  1.00  0.00
ATOM    211  CB  GLU    61       9.417  -8.032   6.792  1.00  0.00
ATOM    212  CG  GLU    61      10.674  -7.621   7.541  1.00  0.00
ATOM    213  CD  GLU    61      10.449  -7.503   9.035  1.00  0.00
ATOM    214  OE1 GLU    61       9.293  -7.666   9.478  1.00  0.00
ATOM    215  OE2 GLU    61      11.430  -7.246   9.765  1.00  0.00
ATOM    216  O   GLU    61       7.220  -8.175   4.888  1.00  0.00
ATOM    217  C   GLU    61       8.329  -8.671   4.604  1.00  0.00
ATOM    218  N   LEU    62       8.497  -9.584   3.671  1.00  0.00
ATOM    219  CA  LEU    62       7.411 -10.082   2.878  1.00  0.00
ATOM    220  CB  LEU    62       7.888 -10.405   1.461  1.00  0.00
ATOM    221  CG  LEU    62       8.510  -9.249   0.675  1.00  0.00
ATOM    222  CD1 LEU    62       8.973  -9.718  -0.696  1.00  0.00
ATOM    223  CD2 LEU    62       7.503  -8.128   0.479  1.00  0.00
ATOM    224  O   LEU    62       7.541 -12.338   3.745  1.00  0.00
ATOM    225  C   LEU    62       6.833 -11.366   3.502  1.00  0.00
ATOM    229  N   ASN    67       0.342 -12.191   3.252  1.00  0.00
ATOM    230  CA  ASN    67      -0.687 -11.216   2.849  1.00  0.00
ATOM    231  CB  ASN    67      -1.922 -11.341   3.743  1.00  0.00
ATOM    232  CG  ASN    67      -2.737 -12.584   3.442  1.00  0.00
ATOM    233  ND2 ASN    67      -3.575 -12.984   4.391  1.00  0.00
ATOM    234  OD1 ASN    67      -2.613 -13.175   2.369  1.00  0.00
ATOM    235  O   ASN    67      -1.019  -8.855   2.529  1.00  0.00
ATOM    236  C   ASN    67      -0.260  -9.741   2.924  1.00  0.00
ATOM    237  N   GLU    68       0.889  -9.492   3.529  1.00  0.00
ATOM    238  CA  GLU    68       1.373  -8.148   3.776  1.00  0.00
ATOM    239  CB  GLU    68       1.021  -7.705   5.197  1.00  0.00
ATOM    240  CG  GLU    68      -0.471  -7.617   5.468  1.00  0.00
ATOM    241  CD  GLU    68      -0.781  -7.189   6.890  1.00  0.00
ATOM    242  OE1 GLU    68       0.174  -6.970   7.665  1.00  0.00
ATOM    243  OE2 GLU    68      -1.978  -7.072   7.228  1.00  0.00
ATOM    244  O   GLU    68       3.555  -9.166   3.646  1.00  0.00
ATOM    245  C   GLU    68       2.868  -8.129   3.605  1.00  0.00
ATOM    246  N   TYR    69       3.365  -6.924   3.447  1.00  0.00
ATOM    247  CA  TYR    69       4.758  -6.659   3.378  1.00  0.00
ATOM    248  CB  TYR    69       5.160  -6.259   1.958  1.00  0.00
ATOM    249  CG  TYR    69       4.941  -7.346   0.930  1.00  0.00
ATOM    250  CD1 TYR    69       3.741  -7.435   0.233  1.00  0.00
ATOM    251  CD2 TYR    69       5.933  -8.279   0.659  1.00  0.00
ATOM    252  CE1 TYR    69       3.532  -8.424  -0.707  1.00  0.00
ATOM    253  CE2 TYR    69       5.741  -9.276  -0.279  1.00  0.00
ATOM    254  CZ  TYR    69       4.527  -9.343  -0.963  1.00  0.00
ATOM    255  OH  TYR    69       4.322 -10.329  -1.899  1.00  0.00
ATOM    256  O   TYR    69       4.235  -4.549   4.301  1.00  0.00
ATOM    257  C   TYR    69       4.977  -5.523   4.357  1.00  0.00
ATOM    258  N   TYR    70       5.926  -5.658   5.282  1.00  0.00
ATOM    259  CA  TYR    70       6.306  -4.551   6.167  1.00  0.00
ATOM    260  CB  TYR    70       6.589  -5.066   7.579  1.00  0.00
ATOM    261  CG  TYR    70       5.363  -5.571   8.304  1.00  0.00
ATOM    262  CD1 TYR    70       5.002  -6.912   8.243  1.00  0.00
ATOM    263  CD2 TYR    70       4.570  -4.707   9.048  1.00  0.00
ATOM    264  CE1 TYR    70       3.882  -7.383   8.902  1.00  0.00
ATOM    265  CE2 TYR    70       3.446  -5.161   9.714  1.00  0.00
ATOM    266  CZ  TYR    70       3.107  -6.510   9.636  1.00  0.00
ATOM    267  OH  TYR    70       1.992  -6.977  10.292  1.00  0.00
ATOM    268  O   TYR    70       8.509  -4.565   5.241  1.00  0.00
ATOM    269  C   TYR    70       7.554  -3.879   5.629  1.00  0.00
ATOM    270  N   VAL    71       7.554  -2.550   5.598  1.00  0.00
ATOM    271  CA  VAL    71       8.710  -1.782   5.191  1.00  0.00
ATOM    272  CB  VAL    71       8.325  -0.665   4.202  1.00  0.00
ATOM    273  CG1 VAL    71       9.548   0.158   3.828  1.00  0.00
ATOM    274  CG2 VAL    71       7.737  -1.258   2.931  1.00  0.00
ATOM    275  O   VAL    71       8.602  -0.518   7.217  1.00  0.00
ATOM    276  C   VAL    71       9.308  -1.167   6.455  1.00  0.00
ATOM    277  N   LYS    72      10.608  -1.352   6.664  1.00  0.00
ATOM    278  CA  LYS    72      11.228  -0.957   7.898  1.00  0.00
ATOM    279  CB  LYS    72      11.664  -2.186   8.697  1.00  0.00
ATOM    280  CG  LYS    72      12.223  -1.867  10.073  1.00  0.00
ATOM    281  CD  LYS    72      12.566  -3.134  10.839  1.00  0.00
ATOM    282  CE  LYS    72      13.122  -2.814  12.218  1.00  0.00
ATOM    283  NZ  LYS    72      13.390  -4.046  13.008  1.00  0.00
ATOM    284  O   LYS    72      13.303  -0.507   6.797  1.00  0.00
ATOM    285  C   LYS    72      12.447  -0.109   7.608  1.00  0.00
ATOM    286  N   VAL    73      12.538   1.046   8.257  1.00  0.00
ATOM    287  CA  VAL    73      13.781   1.842   8.209  1.00  0.00
ATOM    288  CB  VAL    73      13.620   3.088   7.320  1.00  0.00
ATOM    289  CG1 VAL    73      14.898   3.915   7.326  1.00  0.00
ATOM    290  CG2 VAL    73      13.319   2.684   5.884  1.00  0.00
ATOM    291  O   VAL    73      13.334   2.601  10.459  1.00  0.00
ATOM    292  C   VAL    73      14.178   2.317   9.610  1.00  0.00
ATOM    293  N   ILE    74      15.487   2.365   9.875  1.00  0.00
ATOM    294  CA  ILE    74      15.969   2.739  11.191  1.00  0.00
ATOM    295  CB  ILE    74      16.486   1.516  11.971  1.00  0.00
ATOM    296  CG1 ILE    74      15.359   0.501  12.179  1.00  0.00
ATOM    297  CG2 ILE    74      17.012   1.937  13.335  1.00  0.00
ATOM    298  CD1 ILE    74      15.828  -0.826  12.735  1.00  0.00
ATOM    299  O   ILE    74      17.898   3.620  10.121  1.00  0.00
ATOM    300  C   ILE    74      17.091   3.722  11.039  1.00  0.00
ATOM    301  N   GLU    75      17.093   4.694  11.926  1.00  0.00
ATOM    302  CA  GLU    75      18.171   5.635  12.078  1.00  0.00
ATOM    303  CB  GLU    75      17.700   7.050  11.738  1.00  0.00
ATOM    304  CG  GLU    75      17.376   7.261  10.267  1.00  0.00
ATOM    305  CD  GLU    75      18.617   7.301   9.397  1.00  0.00
ATOM    306  OE1 GLU    75      19.731   7.382   9.957  1.00  0.00
ATOM    307  OE2 GLU    75      18.475   7.251   8.157  1.00  0.00
ATOM    308  O   GLU    75      17.765   5.728  14.414  1.00  0.00
ATOM    309  C   GLU    75      18.600   5.547  13.518  1.00  0.00
ATOM    313  N   THR    78      17.705   9.062  15.334  1.00  0.00
ATOM    314  CA  THR    78      16.408   9.696  15.230  1.00  0.00
ATOM    315  CB  THR    78      16.161  10.246  13.813  1.00  0.00
ATOM    316  CG2 THR    78      14.778  10.871  13.719  1.00  0.00
ATOM    317  OG1 THR    78      17.143  11.243  13.507  1.00  0.00
ATOM    318  O   THR    78      14.221   9.218  16.128  1.00  0.00
ATOM    319  C   THR    78      15.227   8.776  15.529  1.00  0.00
ATOM    320  N   ASN    79      15.330   7.509  15.141  1.00  0.00
ATOM    321  CA  ASN    79      14.224   6.600  15.363  1.00  0.00
ATOM    322  CB  ASN    79      12.895   7.358  15.347  1.00  0.00
ATOM    323  CG  ASN    79      12.716   8.246  16.562  1.00  0.00
ATOM    324  ND2 ASN    79      11.876   9.266  16.429  1.00  0.00
ATOM    325  OD1 ASN    79      13.326   8.017  17.606  1.00  0.00
ATOM    326  O   ASN    79      15.134   5.225  13.649  1.00  0.00
ATOM    327  C   ASN    79      14.125   5.524  14.327  1.00  0.00
ATOM    328  N   GLU    80      12.931   4.925  14.279  1.00  0.00
ATOM    329  CA  GLU    80      12.554   3.799  13.426  1.00  0.00
ATOM    330  CB  GLU    80      12.536   2.499  14.232  1.00  0.00
ATOM    331  CG  GLU    80      13.889   2.100  14.797  1.00  0.00
ATOM    332  CD  GLU    80      13.829   0.816  15.602  1.00  0.00
ATOM    333  OE1 GLU    80      12.726   0.242  15.724  1.00  0.00
ATOM    334  OE2 GLU    80      14.885   0.383  16.109  1.00  0.00
ATOM    335  O   GLU    80      10.385   4.861  13.432  1.00  0.00
ATOM    336  C   GLU    80      11.145   4.081  12.859  1.00  0.00
ATOM    337  N   VAL    81      10.858   3.471  11.725  1.00  0.00
ATOM    338  CA  VAL    81       9.530   3.429  11.143  1.00  0.00
ATOM    339  CB  VAL    81       9.394   4.421   9.973  1.00  0.00
ATOM    340  CG1 VAL    81       9.583   5.849  10.459  1.00  0.00
ATOM    341  CG2 VAL    81      10.442   4.134   8.908  1.00  0.00
ATOM    342  O   VAL    81      10.170   1.375  10.093  1.00  0.00
ATOM    343  C   VAL    81       9.278   2.020  10.635  1.00  0.00
ATOM    344  N   ILE    82       8.053   1.559  10.831  1.00  0.00
ATOM    345  CA  ILE    82       7.563   0.327  10.251  1.00  0.00
ATOM    346  CB  ILE    82       7.381  -0.767  11.319  1.00  0.00
ATOM    347  CG1 ILE    82       8.715  -1.079  11.998  1.00  0.00
ATOM    348  CG2 ILE    82       6.849  -2.045  10.688  1.00  0.00
ATOM    349  CD1 ILE    82       8.592  -1.989  13.200  1.00  0.00
ATOM    350  O   ILE    82       5.388   1.316  10.241  1.00  0.00
ATOM    351  C   ILE    82       6.239   0.669   9.618  1.00  0.00
ATOM    352  N   ARG    83       6.107   0.326   8.357  1.00  0.00
ATOM    353  CA  ARG    83       4.861   0.505   7.624  1.00  0.00
ATOM    354  CB  ARG    83       5.043   1.525   6.498  1.00  0.00
ATOM    355  CG  ARG    83       5.386   2.926   6.979  1.00  0.00
ATOM    356  CD  ARG    83       4.222   3.550   7.735  1.00  0.00
ATOM    357  NE  ARG    83       4.516   4.917   8.155  1.00  0.00
ATOM    358  CZ  ARG    83       5.124   5.235   9.293  1.00  0.00
ATOM    359  NH1 ARG    83       5.349   6.507   9.593  1.00  0.00
ATOM    360  NH2 ARG    83       5.508   4.280  10.129  1.00  0.00
ATOM    361  O   ARG    83       5.154  -1.468   6.308  1.00  0.00
ATOM    362  C   ARG    83       4.408  -0.825   7.007  1.00  0.00
ATOM    363  N   GLU    84       3.162  -1.190   7.224  1.00  0.00
ATOM    364  CA  GLU    84       2.660  -2.480   6.766  1.00  0.00
ATOM    365  CB  GLU    84       1.973  -3.226   7.912  1.00  0.00
ATOM    366  CG  GLU    84       2.923  -3.708   8.996  1.00  0.00
ATOM    367  CD  GLU    84       2.196  -4.219  10.224  1.00  0.00
ATOM    368  OE1 GLU    84       0.949  -4.159  10.243  1.00  0.00
ATOM    369  OE2 GLU    84       2.874  -4.681  11.165  1.00  0.00
ATOM    370  O   GLU    84       0.687  -1.586   5.850  1.00  0.00
ATOM    371  C   GLU    84       1.658  -2.291   5.653  1.00  0.00
ATOM    375  N   PRO    87      15.656   2.887  -1.004  1.00  0.00
ATOM    376  CA  PRO    87      14.271   3.198  -1.347  1.00  0.00
ATOM    377  CB  PRO    87      13.695   3.790  -0.060  1.00  0.00
ATOM    378  CG  PRO    87      14.888   4.265   0.700  1.00  0.00
ATOM    379  CD  PRO    87      15.996   3.301   0.380  1.00  0.00
ATOM    380  O   PRO    87      13.083   4.135  -3.220  1.00  0.00
ATOM    381  C   PRO    87      14.100   4.195  -2.499  1.00  0.00
ATOM    382  N   LYS    88      15.067   5.104  -2.665  1.00  0.00
ATOM    383  CA  LYS    88      15.012   6.072  -3.753  1.00  0.00
ATOM    384  CB  LYS    88      16.229   6.998  -3.708  1.00  0.00
ATOM    385  CG  LYS    88      16.222   7.975  -2.543  1.00  0.00
ATOM    386  CD  LYS    88      17.455   8.864  -2.560  1.00  0.00
ATOM    387  CE  LYS    88      17.461   9.824  -1.382  1.00  0.00
ATOM    388  NZ  LYS    88      18.681  10.677  -1.367  1.00  0.00
ATOM    389  O   LYS    88      14.329   5.738  -6.050  1.00  0.00
ATOM    390  C   LYS    88      15.001   5.324  -5.096  1.00  0.00
ATOM    391  N   ARG    89      15.763   4.243  -5.189  1.00  0.00
ATOM    392  CA  ARG    89      15.802   3.481  -6.441  1.00  0.00
ATOM    393  CB  ARG    89      16.872   2.390  -6.371  1.00  0.00
ATOM    394  CG  ARG    89      18.297   2.916  -6.397  1.00  0.00
ATOM    395  CD  ARG    89      19.305   1.789  -6.241  1.00  0.00
ATOM    396  NE  ARG    89      20.682   2.279  -6.255  1.00  0.00
ATOM    397  CZ  ARG    89      21.747   1.524  -6.008  1.00  0.00
ATOM    398  NH1 ARG    89      22.960   2.056  -6.042  1.00  0.00
ATOM    399  NH2 ARG    89      21.595   0.237  -5.726  1.00  0.00
ATOM    400  O   ARG    89      14.118   2.637  -7.918  1.00  0.00
ATOM    401  C   ARG    89      14.472   2.802  -6.744  1.00  0.00
ATOM    402  N   TRP    90      13.717   2.430  -5.710  1.00  0.00
ATOM    403  CA  TRP    90      12.431   1.780  -5.923  1.00  0.00
ATOM    404  CB  TRP    90      11.959   1.094  -4.641  1.00  0.00
ATOM    405  CG  TRP    90      12.795  -0.086  -4.247  1.00  0.00
ATOM    406  CD1 TRP    90      13.789  -0.110  -3.312  1.00  0.00
ATOM    407  CD2 TRP    90      12.710  -1.413  -4.779  1.00  0.00
ATOM    408  CE2 TRP    90      13.684  -2.190  -4.121  1.00  0.00
ATOM    409  CE3 TRP    90      11.907  -2.023  -5.749  1.00  0.00
ATOM    410  NE1 TRP    90      14.330  -1.371  -3.229  1.00  0.00
ATOM    411  CZ2 TRP    90      13.875  -3.542  -4.398  1.00  0.00
ATOM    412  CZ3 TRP    90      12.100  -3.363  -6.021  1.00  0.00
ATOM    413  CH2 TRP    90      13.075  -4.110  -5.351  1.00  0.00
ATOM    414  O   TRP    90      10.671   2.668  -7.253  1.00  0.00
ATOM    415  C   TRP    90      11.470   2.858  -6.326  1.00  0.00
ATOM    416  N   LEU    91      11.492   3.983  -5.598  1.00  0.00
ATOM    417  CA  LEU    91      10.644   5.089  -5.938  1.00  0.00
ATOM    418  CB  LEU    91      10.907   6.272  -5.004  1.00  0.00
ATOM    419  CG  LEU    91      10.058   7.522  -5.239  1.00  0.00
ATOM    420  CD1 LEU    91       8.581   7.214  -5.048  1.00  0.00
ATOM    421  CD2 LEU    91      10.444   8.626  -4.266  1.00  0.00
ATOM    422  O   LEU    91       9.883   5.923  -8.056  1.00  0.00
ATOM    423  C   LEU    91      10.841   5.616  -7.386  1.00  0.00
ATOM    424  N   ASP    92      12.075   5.750  -7.847  1.00  0.00
ATOM    425  CA  ASP    92      12.355   6.135  -9.245  1.00  0.00
ATOM    426  CB  ASP    92      13.850   6.011  -9.546  1.00  0.00
ATOM    427  CG  ASP    92      14.670   7.102  -8.885  1.00  0.00
ATOM    428  OD1 ASP    92      14.070   8.077  -8.388  1.00  0.00
ATOM    429  OD2 ASP    92      15.913   6.980  -8.863  1.00  0.00
ATOM    430  O   ASP    92      11.041   5.780 -11.174  1.00  0.00
ATOM    431  C   ASP    92      11.625   5.273 -10.258  1.00  0.00
ATOM    432  N   PHE    93      11.659   3.955 -10.079  1.00  0.00
ATOM    433  CA  PHE    93      10.916   3.013 -10.940  1.00  0.00
ATOM    434  CB  PHE    93      11.071   1.581 -10.425  1.00  0.00
ATOM    435  CG  PHE    93      10.309   0.563 -11.226  1.00  0.00
ATOM    436  CD1 PHE    93      10.806   0.096 -12.430  1.00  0.00
ATOM    437  CD2 PHE    93       9.096   0.074 -10.775  1.00  0.00
ATOM    438  CE1 PHE    93      10.106  -0.840 -13.167  1.00  0.00
ATOM    439  CE2 PHE    93       8.396  -0.863 -11.510  1.00  0.00
ATOM    440  CZ  PHE    93       8.895  -1.319 -12.703  1.00  0.00
ATOM    441  O   PHE    93       8.811   3.417 -12.069  1.00  0.00
ATOM    442  C   PHE    93       9.410   3.319 -10.992  1.00  0.00
ATOM    443  N   TYR    94       8.801   3.521  -9.828  1.00  0.00
ATOM    444  CA  TYR    94       7.355   3.679  -9.740  1.00  0.00
ATOM    445  CB  TYR    94       6.916   3.787  -8.278  1.00  0.00
ATOM    446  CG  TYR    94       6.952   2.474  -7.529  1.00  0.00
ATOM    447  CD1 TYR    94       7.959   2.208  -6.610  1.00  0.00
ATOM    448  CD2 TYR    94       5.981   1.505  -7.743  1.00  0.00
ATOM    449  CE1 TYR    94       8.000   1.011  -5.920  1.00  0.00
ATOM    450  CE2 TYR    94       6.005   0.303  -7.063  1.00  0.00
ATOM    451  CZ  TYR    94       7.029   0.062  -6.146  1.00  0.00
ATOM    452  OH  TYR    94       7.068  -1.131  -5.460  1.00  0.00
ATOM    453  O   TYR    94       5.851   4.872 -11.081  1.00  0.00
ATOM    454  C   TYR    94       6.875   4.903 -10.444  1.00  0.00
ATOM    455  N   ALA    95       7.648   5.978 -10.348  1.00  0.00
ATOM    456  CA  ALA    95       7.414   7.185 -11.118  1.00  0.00
ATOM    457  CB  ALA    95       8.579   8.150 -10.959  1.00  0.00
ATOM    458  O   ALA    95       6.541   7.659 -13.279  1.00  0.00
ATOM    459  C   ALA    95       7.251   6.919 -12.601  1.00  0.00
ATOM    460  N   ALA    96       7.962   5.921 -13.133  1.00  0.00
ATOM    461  CA  ALA    96       7.945   5.686 -14.562  1.00  0.00
ATOM    462  CB  ALA    96       9.327   5.275 -15.049  1.00  0.00
ATOM    463  O   ALA    96       6.925   4.353 -16.241  1.00  0.00
ATOM    464  C   ALA    96       7.008   4.606 -15.046  1.00  0.00
TER
END



