
PFRMAT TS
TARGET T0351
AUTHOR Huber-Torda-server
REMARK This is a multi-part message in MIME format.
REMARK 
REMARK --1JL7NDLRG8-=-16GFAIWI1X-CUT-HERE-56ND1YH63Z-=-1DH9115SJI
REMARK Content-Type: text/plain; charset=us-ascii
REMARK Content-Transfer-Encoding: 7bit
REMARK Content-Disposition: inline
REMARK 
REMARK Title: "T0351"
REMARK Results sent to "servers@predictioncenter.org"
REMARK Library from pdb90.list with 12339 template structures.
REMARK Brief results printed for 50 templates.
REMARK Long alignments printed for 10 templates.
REMARK Models made for the best 10 models.
REMARK Models will be sent as 10 attachments per file
REMARK Sequence length 117 is
REMARK MILYDAIMYK YPNAVSRKDF ELRNDGNGSY IEKWNLRAPL PTQAELETWW EELQKNPPYE
REMARK PPDQVELLAQ ELSQEKLARK QLEELNKTLG NELSDIKLSL LSLKGDYAEL EHHHHHH
REMARK 
REMARK 
REMARK 
REMARK sw refers to Smith and Waterman alignment, nw refers to Needleman & Wunsch
REMARK z scr : the z-score of the alignment with 1000 alternative alignments
REMARK sw scr: the combined results of score function + gaps for sw alignment
REMARK sw cvr: coverage (fraction of sequence) accounted for by sw alignment
REMARK nw cvr: coverage                        accounted for by nw alignment
REMARK sw1   : score of sw alignment in first score function
REMARK sw2   : score of sw alignment in second score function
REMARK ____________ Summary of best templates   _________________________________
REMARK   struct    z scr   sw scr sw cvr nw cvr      sw1      sw2
REMARK    1vlvA  1.3e+03     39.5   0.04  0.043       39        0
REMARK    2amlA  7.9e+02     39.5   0.04  0.043       39        0
REMARK    1zkoA  5.1e+02     39.5   0.04  0.043       39        0
REMARK    2afbA  4.3e+02     39.5   0.04  0.043       40        0
REMARK    1zx8A       24     24.0   0.04  0.043       24        0
REMARK    1szhA       17     53.6   0.79   0.84       45  3.2e+02
REMARK    1yhkA       17     77.1   0.92   0.92       70  3.8e+02
REMARK    1okrA       17     69.4   0.85   0.87       63  3.4e+02
REMARK    2h8kA       17     69.6   0.82   0.86       63  3.1e+02
REMARK    1ornA       17     67.8   0.83   0.83       64    4e+02
REMARK    1sd4A       17     72.2   0.87   0.88       67  3.7e+02
REMARK    1aquA       17     63.9   0.83   0.86       64  2.8e+02
REMARK    1ywmA       17     78.4   0.85   0.85       86  3.9e+02
REMARK    1lshA       17     71.2   0.88   0.88       70  3.2e+02
REMARK    1x0oA       17     56.8   0.72   0.78       56  3.4e+02
REMARK    1womA       17     66.8   0.88   0.88       53  3.6e+02
REMARK    1n91A       17     91.4   0.81   0.81       95  3.9e+02
REMARK    1wi0A       16     53.0   0.61   0.61       53    3e+02
REMARK    1fntD       16     61.9   0.88   0.88       57  3.5e+02
REMARK    1w9hA       16     60.0   0.91   0.92       55  3.8e+02
REMARK    1i7qA       16     59.3   0.85   0.87       66  3.3e+02
REMARK    2gasA       16     62.6   0.86   0.86       59  3.9e+02
REMARK    2a0mA       16     49.7   0.79   0.84       48  3.9e+02
REMARK    1u6tA       16     92.4   0.91   0.91    1e+02  3.1e+02
REMARK    1ujmA       16     58.5   0.75   0.75       54  3.9e+02
REMARK    1wqfA       16     75.8   0.90    0.9       72  3.7e+02
REMARK    1k8kG       16     63.2   0.84   0.85       53  3.7e+02
REMARK    1dfoA       16     56.1   0.96   0.96       51  3.3e+02
REMARK    1dvoA       16     62.4   0.77   0.79       68  3.6e+02
REMARK    1woqA       16     62.9   0.79   0.83       60  3.9e+02
REMARK    1sgmA       16     63.5   0.79   0.83       57  2.8e+02
REMARK    2crpA       16     52.5   0.88   0.97       49  3.1e+02
REMARK    1do0A       16     67.9   0.85   0.86       64  4.3e+02
REMARK    1ezvB       16     57.8   0.91   0.91       58  2.8e+02
REMARK    1j36A       16     83.2   0.88   0.88       78  2.8e+02
REMARK    1iruA       16     59.2   0.84   0.86       58  3.2e+02
REMARK    1gqnA       16     54.1   0.90    0.9       63  3.1e+02
REMARK    1xviA       16     62.9   0.92   0.93       58    3e+02
REMARK    1a2xA       16     68.2   0.88   0.88       67  4.3e+02
REMARK    2g36A       16     57.0   0.93   0.95       59  3.4e+02
REMARK    2d2mC       16     62.3   0.82   0.86       56  3.6e+02
REMARK    1p2fA       16     62.7   0.92   0.92       64  4.2e+02
REMARK    1ofcX       16     68.9   0.82   0.83       68  4.2e+02
REMARK    1v2aA       16     58.6   0.83   0.87       58  3.2e+02
REMARK    1ve5A       16     54.7   0.86    0.9       50  3.9e+02
REMARK    1ku9A       16     67.9   0.85   0.85       64  4.4e+02
REMARK    1g99A       16     48.2   0.73   0.79       47    3e+02
REMARK    2sas_       16     59.3   0.70   0.73       55  3.8e+02
REMARK    1avc_       16     65.6   0.97   0.97       64    4e+02
REMARK    1g4uS       16     64.9   0.93   0.94       64  2.7e+02
REMARK 
REMARK ____________ Summary of coverage of query sequence _______________________
REMARK S & W coverage with 1vlvA
REMARK ----------------------------------------------------------------------------------------------------------------XXXXX
REMARK S & W coverage with 2amlA
REMARK ----------------------------------------------------------------------------------------------------------------XXXXX
REMARK S & W coverage with 1zkoA
REMARK ----------------------------------------------------------------------------------------------------------------XXXXX
REMARK S & W coverage with 2afbA
REMARK ----------------------------------------------------------------------------------------------------------------XXXXX
REMARK S & W coverage with 1zx8A
REMARK ----------------------------------------------------------------------------------------------------------------XXXXX
REMARK S & W coverage with 1szhA
REMARK --XXXXXXXXXXXXX----XXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XX-XXXXXXX----XXXXX-------
REMARK S & W coverage with 1yhkA
REMARK XXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXX---XXXXXX-XXXXXX---XXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
REMARK S & W coverage with 1okrA
REMARK XXXXXXXXXXX---XXXXX----------XXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--
REMARK S & W coverage with 2h8kA
REMARK XXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXX-----
REMARK S & W coverage with 1ornA
REMARK XXXXXXXXXXXXXXXX--XXXXXXXXX--XXXXXXXXXXX-XXXXXXXXXXXXXXX--XX--XXXXXXX--XXXXXX-XXXXXXX-XXXXXXXXXXXX----X---XXXXXXXXXXX
REMARK S & W coverage with 1sd4A
REMARK XXXXX-XXXXX-XXXXXXX----------XXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-
REMARK S & W coverage with 1aquA
REMARK XXXXXXXXXXXXXXXXXXXX-----X--XXXXXXXXXXXXXXXXXXXXXXXX-XXXX-----XXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXX----
REMARK S & W coverage with 1ywmA
REMARK XXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXX-XX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXX-XX-XXX--XXXXXXXXXX--
REMARK S & W coverage with 1lshA
REMARK XXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXX
REMARK S & W coverage with 1x0oA
REMARK -----XX--X--XXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXX------XXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXX-XXXXXXXXXXXXXXXX------
REMARK S & W coverage with 1womA
REMARK XXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXX
REMARK S & W coverage with 1n91A
REMARK XXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---X-----------XXXXXXXX---XXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXX-
REMARK S & W coverage with 1wi0A
REMARK XXXXXXXXXXXXXXXXXX-XXXXXXXXXXXX--------X-XXXXXXXXXX---------------XXXXXXXX-----XXX------XXXXXXXXXXXXXXXXXXX----------
REMARK S & W coverage with 1fntD
REMARK XXXXXXXXXXXXXX--XXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXX------XX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
REMARK S & W coverage with 1w9hA
REMARK XXXXXXXXXXXXXXXXXX-XXXXX-XXXXXXX-XXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXX-
REMARK S & W coverage with 1i7qA
REMARK XXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---
REMARK S & W coverage with 2gasA
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXX-X-X-----XXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXX
REMARK S & W coverage with 2a0mA
REMARK XXXXXXXXXXXXXXX----XXXXXX---XX---XXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXX--XXXXXXXX----XXXXX--XXXXXXXXXXXXXXXXX-----
REMARK S & W coverage with 1u6tA
REMARK -----XXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XX-XXXXXXXX
REMARK S & W coverage with 1ujmA
REMARK XXXXXXXXXXXXX--------XX----XXXX--XXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXX---XXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------
REMARK S & W coverage with 1wqfA
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
REMARK S & W coverage with 1k8kG
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXX---XXXXXXXXXX-------XXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--
REMARK S & W coverage with 1dfoA
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXX-XXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXX-XXXXXXXX
REMARK S & W coverage with 1dvoA
REMARK --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XX-XXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXX-----------XXX-XXXX---XXXXXXXXX--
REMARK S & W coverage with 1woqA
REMARK -XXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXX----XXXXXX----
REMARK S & W coverage with 1sgmA
REMARK XXXXXXXXXXXXXXX---XXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXX-----
REMARK S & W coverage with 2crpA
REMARK -------XXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----
REMARK S & W coverage with 1do0A
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXX----XXXXXXXXXXXX--XXXXXXXXXX--
REMARK S & W coverage with 1ezvB
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------
REMARK S & W coverage with 1j36A
REMARK XXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXX-
REMARK S & W coverage with 1iruA
REMARK XXXXXXXXXXXXXXXX---XXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXX----------XX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---
REMARK S & W coverage with 1gqnA
REMARK XXXXXXXXXXXXXXXXX--XXXXXXXXX-------XXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
REMARK S & W coverage with 1xviA
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXX-
REMARK S & W coverage with 1a2xA
REMARK XXXXXXXXX------------XXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
REMARK S & W coverage with 2g36A
REMARK -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXX-
REMARK S & W coverage with 2d2mC
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXX--XXXXXXX-----
REMARK S & W coverage with 1p2fA
REMARK XXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXX--XXXXXXXXXXXX
REMARK S & W coverage with 1ofcX
REMARK XXXXXXXXXXXXXXX--XXXXXXX-XXXXX-------XXX-XXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXX----XXXXX-XXXXXX--XXXXXXXXXX--
REMARK S & W coverage with 1v2aA
REMARK -XXXXXXXXXXXX----XXXXXXXXX-XXXX--X-----X-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXX----
REMARK S & W coverage with 1ve5A
REMARK XXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXX-XXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXX----X-XXXXXXXX-XXXXXXX----
REMARK S & W coverage with 1ku9A
REMARK XXXXXXXXXXXXXXXXXXXX----------XXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---
REMARK S & W coverage with 1g99A
REMARK XXXXXXXXXXXXXX----XXXXX--XXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXX-XXXXXX-------
REMARK S & W coverage with 2sas_
REMARK -XXXXXXXXXX-------XXXXXXXXXXX----------X-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXX-----XXXXXXX-X--XXXXXXXXXX--
REMARK S & W coverage with 1avc_
REMARK XXXXXXXXXXXX--XXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
REMARK S & W coverage with 1g4uS
REMARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXX-XXXXXXXXXXXXX---XXXXXXXXXX-
REMARK 
REMARK ____________ Best detailed alignments       ______________________________
REMARK __________________________________________________________________________
REMARK Alignment to 1vlvA
REMARK z-score is 1344 sw cover: 0.04 nw cover 0.04
REMARK Seq ID 100 % (5 / 5) in 5 total including gaps
REMARK   :  
REMARK   :  
REMARK   :  
REMARK hhhhh
REMARK hhhhh
REMARK     :
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 2amlA
REMARK z-score is 793.4 sw cover: 0.04 nw cover 0.04
REMARK Seq ID 100 % (5 / 5) in 5 total including gaps
REMARK   :  
REMARK   :  
REMARK   :  
REMARK hhhhh
REMARK hhhhh
REMARK     :
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 1zkoA
REMARK z-score is 507 sw cover: 0.04 nw cover 0.04
REMARK Seq ID 100 % (5 / 5) in 5 total including gaps
REMARK   :  
REMARK   :  
REMARK   :  
REMARK hhhhh
REMARK hhhhh
REMARK     :
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 2afbA
REMARK z-score is 431.3 sw cover: 0.04 nw cover 0.04
REMARK Seq ID 100 % (5 / 5) in 5 total including gaps
REMARK   :  
REMARK   :  
REMARK   :  
REMARK hhhhh
REMARK hhhhh
REMARK     :
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 1zx8A
REMARK z-score is 23.63 sw cover: 0.04 nw cover 0.04
REMARK Seq ID 60 % (3 / 5) in 5 total including gaps
REMARK   :  
REMARK   :  
REMARK   :  
REMARK hhhhh
REMARK hhhmr
REMARK     :
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 1szhA
REMARK z-score is 17.46 sw cover: 0.79 nw cover 0.84
REMARK Seq ID 15.1 % (14 / 93) in 108 total including gaps
REMARK   :    1    :    2    :    3    :    4    :    5    :    6  
REMARK   :    0    :    0    :    0    :    0    :    0    :    0  
REMARK lydaimykypnavsrkdfelrndgngsyiekwnlraplptqaeletwweelqknppyepp
REMARK lqnvlfakepkkk----inld----dsvccsvfgndqedsgrrcenrcknlmtspsidaa
REMARK    :    0        :        0    :    0    :    0    :    1   
REMARK    :    6        :        7    :    8    :    9    :    0   
REMARK    :    0        :        0    :    0    :    0    :    0   
REMARK 
REMARK   :    0    :    0    :    0    :    1    :    1
REMARK   :    7    :    8    :    9    :    0    :    1
REMARK   :    0    :    0    :    0    :    0    :    0
REMARK dqvellaqelsqeklarkqleelnktlgnelsdiklsllslkgdyael
REMARK trldsikscslldnvlykcfekcrslr--kd-gikievl----qfeey
REMARK  :    1    :    1    :    1       :        1    
REMARK  :    1    :    2    :    3       :        4    
REMARK  :    0    :    0    :    0       :        0    
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 1yhkA
REMARK z-score is 17.35 sw cover: 0.92 nw cover 0.92
REMARK Seq ID 14.8 % (16 / 108) in 124 total including gaps
REMARK     :     1     :    2    :    3     :    4    :    5    :  
REMARK     :     0     :    0    :    0     :    0    :    0    :  
REMARK milydaim-ykyp-navsrkdfelrndgngsyie-kwnlraplptqaeletwweelqknp
REMARK fqvqddvmdcftppeqlgkvgtdie-dakcswlavtflgka---naaqva-efkany---
REMARK     2    :    2    :    2     :    2    :       2     :     
REMARK     5    :    6    :    7     :    8    :       9     :     
REMARK     0    :    0    :    0     :    0    :       0     :     
REMARK 
REMARK   0    :    0    :    0    :    0    :    1    :        1   
REMARK   6    :    7    :    8    :    9    :    0    :        1   
REMARK   0    :    0    :    0    :    0    :    0    :        0   
REMARK pyeppdqvellaqelsqeklarkqleelnktlgnelsdiklsllslkgdyae----lehh
REMARK gdkdpakvavvkrlyseanl-qadfaayeaevvreveslieqlkvksptfaesvavvwek
REMARK   3    :    3    :     3    :    3    :    3    :    3    : 
REMARK   0    :    1    :     2    :    3    :    4    :    5    : 
REMARK   0    :    0    :     0    :    0    :    0    :    0    : 
REMARK 
REMARK  :  
REMARK  :  
REMARK  :  
REMARK hhhh
REMARK thkr
REMARK    3
REMARK    6
REMARK    0
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 1okrA
REMARK z-score is 17.1 sw cover: 0.85 nw cover 0.87
REMARK Seq ID 14 % (14 / 100) in 121 total including gaps
REMARK     :     1    :    2    :    3    :    4    :    5       : 
REMARK     :     0    :    0    :    0    :    0    :    0       : 
REMARK milydaimy-kypnavsrkdfelrndgngsyiekwnlraplptqaeletwweel---qkn
REMARK wevmniiwmkky---asann----------iieeiqmqkdw-spktirtlitrlykkgfi
REMARK 1    :    2       :              3    :     4    :    5    :
REMARK 0    :    0       :              0    :     0    :    0    :
REMARK 
REMARK    0    :    0    :    0     :    0    :    1     :    1    
REMARK    6    :    7    :    8     :    9    :    0     :    1    
REMARK    0    :    0    :    0     :    0    :    0     :    0    
REMARK ppyeppdqvellaqelsqeklarkqle-elnktlgnelsdiklsllslk-gdyaelehhh
REMARK drkkdnkifqyy-slveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelr
REMARK     0    :     0    :    0    :    0    :    1    :    1    
REMARK     6    :     7    :    8    :    9    :    0    :    1    
REMARK     0    :     0    :    0    :    0    :    0    :    0    
REMARK 
REMARK :
REMARK :
REMARK :
REMARK h
REMARK n
REMARK :
REMARK :
REMARK :
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 2h8kA
REMARK z-score is 17.06 sw cover: 0.82 nw cover 0.86
REMARK Seq ID 12.5 % (12 / 96) in 115 total including gaps
REMARK     :    1    :    2    :    3    :     4     :    5    :   
REMARK     :    0    :    0    :    0    :     0     :    0    :   
REMARK milydaimykypnavsrkdfelrndgngsyiekwnl-raplptqa-eletwweelqknpp
REMARK lvsyyhfhrmasfmpdpqnle-------efyekfmsgkvvggswfdhvkgwwaakdmhri
REMARK   0    :    1    :           1    :    1    :    1    :    1
REMARK   9    :    0    :           1    :    2    :    3    :    4
REMARK   0    :    0    :           0    :    0    :    0    :    0
REMARK 
REMARK  0    :    0    :    0    :    0    :     1    :    1  
REMARK  6    :    7    :    8    :    9    :     0    :    1  
REMARK  0    :    0    :    0    :    0    :     0    :    0  
REMARK yeppdqvellaqelsqeklarkqleelnktlgnelsdikl-sllslkgdyaeleh
REMARK ------lylfyedikkdp--kreiekilkflekdiseeilnkiiyhts-fdvmkq
REMARK           :    1      :    1    :    1    :    1     : 
REMARK           :    5      :    6    :    7    :    8     : 
REMARK           :    0      :    0    :    0    :    0     : 
REMARK 
REMARK __________________________________________________________________________
REMARK Alignment to 1ornA
REMARK z-score is 16.89 sw cover: 0.83 nw cover 0.83
REMARK Seq ID 19.6 % (19 / 97) in 117 total including gaps
REMARK     :    1    :    2    :    3    :    4    :    5    :    6
REMARK     :    0    :    0    :    0    :    0    :    0    :    0
REMARK milydaimykypnavsrkdfelrndgngsyiekwnlraplptqaeletwweelqknppye
REMARK rycldemakmfpdahc--elvhrnpfe--lliavvlsaqc-tdalvnkvtkrlfek--yr
REMARK   1    :    2      :    3      :    4     :    5    :      6
REMARK   0    :    0      :    0      :    0     :    0    :      0
REMARK 
REMARK     :    0    :    0    :    0    :    1    :    1    :  
REMARK     :    7    :    8    :    9    :    0    :    1    :  
REMARK     :    0    :    0    :    0    :    0    :    0    :  
REMARK ppdqvellaqelsqeklarkqleelnktlgnelsdiklsllslkgdyaelehhhhhh
REMARK --tphdyia--vpleel-eqdirsi-glyrnkarniqk----l---camlidkynge
REMARK       :      0     :    0     :    0           :    1    
REMARK       :      7     :    8     :    9           :    0    
REMARK       :      0     :    0     :    0           :    0    
REMARK 
REMARK Writing models for 10 structures
REMARK __________________________________________________________________________
REMARK Wurst gegessen at Wed Jun 28 19:55:57 2006
REMARK I took 67:24 min user and 0:27 min sys time
REMARK Run on node30
REMARK 
REMARK --1JL7NDLRG8-=-16GFAIWI1X-CUT-HERE-56ND1YH63Z-=-1DH9115SJI
REMARK Content-Type: chemical/x-pdb
REMARK Content-Transfer-Encoding: 7bit
REMARK Content-Disposition: attachment;
REMARK  filename="1vlvA.pdb"
REMARK 
METHOD -------------
REMARK SCORE 1344.33
MODEL 1
PARENT 1vlv_A
REMARK Wed 28 Jun 2006 07:55:56 PM CEST
REMARK Now the original sequence follows. It probably has more
REMARK residues than the model below.
REMARK SEQRES   1    117  MET ILE LEU TYR ASP ALA ILE MET TYR LYS TYR PRO ASN
REMARK SEQRES   2    117  ALA VAL SER ARG LYS ASP PHE GLU LEU ARG ASN ASP GLY
REMARK SEQRES   3    117  ASN GLY SER TYR ILE GLU LYS TRP ASN LEU ARG ALA PRO
REMARK SEQRES   4    117  LEU PRO THR GLN ALA GLU LEU GLU THR TRP TRP GLU GLU
REMARK SEQRES   5    117  LEU GLN LYS ASN PRO PRO TYR GLU PRO PRO ASP GLN VAL
REMARK SEQRES   6    117  GLU LEU LEU ALA GLN GLU LEU SER GLN GLU LYS LEU ALA
REMARK SEQRES   7    117  ARG LYS GLN LEU GLU GLU LEU ASN LYS THR LEU GLY ASN
REMARK SEQRES   8    117  GLU LEU SER ASP ILE LYS LEU SER LEU LEU SER LEU LYS
REMARK SEQRES   9    117  GLY ASP TYR ALA GLU LEU GLU HIS HIS HIS HIS HIS HIS
ATOM      1  N   HIS   113     202.871 176.009  57.135  1.00  1.00
ATOM      2  CA  HIS   113     203.797 175.066  56.444  1.00  1.00
ATOM      3  C   HIS   113     204.292 175.670  55.138  1.00  1.00
ATOM      4  O   HIS   113     204.595 174.898  54.211  1.00  1.00
ATOM      5  CB  HIS   113     203.102 173.725  56.053  1.00  1.00
ATOM      6  N   HIS   114     204.409 177.009  55.058  1.00  1.00
ATOM      7  CA  HIS   114     204.420 177.798  53.768  1.00  1.00
ATOM      8  C   HIS   114     203.020 177.882  53.120  1.00  1.00
ATOM      9  O   HIS   114     202.567 178.988  52.821  1.00  1.00
ATOM     10  CB  HIS   114     205.419 177.306  52.720  1.00  1.00
ATOM     11  N   HIS   115     202.397 176.731  52.836  1.00  1.00
ATOM     12  CA  HIS   115     200.924 176.649  52.687  1.00  1.00
ATOM     13  C   HIS   115     200.455 175.746  53.790  1.00  1.00
ATOM     14  O   HIS   115     200.711 174.545  53.777  1.00  1.00
ATOM     15  CB  HIS   115     200.448 176.134  51.319  1.00  1.00
ATOM     16  N   HIS   116     199.798 176.350  54.770  1.00  1.00
ATOM     17  CA  HIS   116     199.216 175.622  55.881  1.00  1.00
ATOM     18  C   HIS   116     198.047 174.685  55.440  1.00  1.00
ATOM     19  O   HIS   116     197.103 175.128  54.773  1.00  1.00
ATOM     20  CB  HIS   116     198.755 176.652  56.923  1.00  1.00
ATOM     21  N   HIS   117     198.117 173.405  55.826  1.00  1.00
ATOM     22  CA  HIS   117     197.071 172.436  55.528  1.00  1.00
ATOM     23  C   HIS   117     195.877 172.637  56.474  1.00  1.00
ATOM     24  O   HIS   117     196.072 172.642  57.703  1.00  1.00
ATOM     25  CB  HIS   117     197.584 170.990  55.674  1.00  1.00
TER
END



