
PFRMAT TS
TARGET T0351
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0351 model 4 Wed Jun 28 13:59:43 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  4
PARENT N/A
ATOM      2  N   ARG    37      -6.096  -7.619   4.036  1.00  0.00
ATOM      3  CA  ARG    37      -4.899  -8.037   3.327  1.00  0.00
ATOM      4  CB  ARG    37      -3.818  -8.482   4.314  1.00  0.00
ATOM      5  CG  ARG    37      -3.245  -7.354   5.156  1.00  0.00
ATOM      6  CD  ARG    37      -2.250  -7.880   6.177  1.00  0.00
ATOM      7  NE  ARG    37      -2.888  -8.736   7.174  1.00  0.00
ATOM      8  CZ  ARG    37      -2.225  -9.507   8.030  1.00  0.00
ATOM      9  NH1 ARG    37      -2.890 -10.254   8.901  1.00  0.00
ATOM     10  NH2 ARG    37      -0.899  -9.532   8.013  1.00  0.00
ATOM     11  O   ARG    37      -6.180  -9.947   2.634  1.00  0.00
ATOM     12  C   ARG    37      -5.225  -9.209   2.397  1.00  0.00
ATOM     13  N   ALA    38      -4.413  -9.342   1.358  1.00  0.00
ATOM     14  CA  ALA    38      -4.603 -10.412   0.393  1.00  0.00
ATOM     15  CB  ALA    38      -3.830 -10.117  -0.883  1.00  0.00
ATOM     16  O   ALA    38      -3.326 -11.725   1.943  1.00  0.00
ATOM     17  C   ALA    38      -4.103 -11.728   0.989  1.00  0.00
ATOM     18  N   PRO    39      -4.568 -12.821   0.402  1.00  0.00
ATOM     19  CA  PRO    39      -4.176 -14.142   0.865  1.00  0.00
ATOM     20  CB  PRO    39      -5.272 -15.064   0.325  1.00  0.00
ATOM     21  CG  PRO    39      -5.630 -14.481  -1.001  1.00  0.00
ATOM     22  CD  PRO    39      -5.633 -12.989  -0.813  1.00  0.00
ATOM     23  O   PRO    39      -2.617 -15.603  -0.230  1.00  0.00
ATOM     24  C   PRO    39      -2.800 -14.512   0.309  1.00  0.00
ATOM     25  N   LEU    40      -1.866 -13.584   0.460  1.00  0.00
ATOM     26  CA  LEU    40      -0.512 -13.799  -0.019  1.00  0.00
ATOM     27  CB  LEU    40       0.181 -14.889   0.803  1.00  0.00
ATOM     28  CG  LEU    40       0.286 -14.639   2.308  1.00  0.00
ATOM     29  CD1 LEU    40       0.961 -15.812   3.002  1.00  0.00
ATOM     30  CD2 LEU    40       1.102 -13.386   2.589  1.00  0.00
ATOM     31  O   LEU    40       0.467 -14.799  -1.970  1.00  0.00
ATOM     32  C   LEU    40      -0.513 -14.235  -1.485  1.00  0.00
ATOM     33  N   PRO    41      -1.623 -13.955  -2.152  1.00  0.00
ATOM     34  CA  PRO    41      -1.764 -14.312  -3.554  1.00  0.00
ATOM     35  CB  PRO    41      -2.902 -13.417  -4.051  1.00  0.00
ATOM     36  CG  PRO    41      -2.872 -12.235  -3.140  1.00  0.00
ATOM     37  CD  PRO    41      -2.477 -12.759  -1.788  1.00  0.00
ATOM     38  O   PRO    41       0.380 -13.261  -3.798  1.00  0.00
ATOM     39  C   PRO    41      -0.448 -14.032  -4.282  1.00  0.00
ATOM     40  N   THR    42      -0.297 -14.672  -5.431  1.00  0.00
ATOM     41  CA  THR    42       0.905 -14.502  -6.231  1.00  0.00
ATOM     42  CB  THR    42       1.190 -15.746  -7.094  1.00  0.00
ATOM     43  CG2 THR    42       1.316 -16.983  -6.220  1.00  0.00
ATOM     44  OG1 THR    42       0.118 -15.940  -8.023  1.00  0.00
ATOM     45  O   THR    42      -0.358 -12.900  -7.496  1.00  0.00
ATOM     46  C   THR    42       0.756 -13.302  -7.167  1.00  0.00
ATOM     47  N   GLN    43       1.897 -12.760  -7.570  1.00  0.00
ATOM     48  CA  GLN    43       1.909 -11.614  -8.462  1.00  0.00
ATOM     49  CB  GLN    43       3.341 -11.280  -8.887  1.00  0.00
ATOM     50  CG  GLN    43       4.184 -10.653  -7.788  1.00  0.00
ATOM     51  CD  GLN    43       5.624 -10.437  -8.212  1.00  0.00
ATOM     52  OE1 GLN    43       6.020 -10.809  -9.316  1.00  0.00
ATOM     53  NE2 GLN    43       6.414  -9.833  -7.331  1.00  0.00
ATOM     54  O   GLN    43       0.475 -11.010 -10.290  1.00  0.00
ATOM     55  C   GLN    43       1.086 -11.910  -9.717  1.00  0.00
ATOM     56  N   ALA    44       1.097 -13.177 -10.108  1.00  0.00
ATOM     57  CA  ALA    44       0.359 -13.603 -11.285  1.00  0.00
ATOM     58  CB  ALA    44       0.756 -15.019 -11.676  1.00  0.00
ATOM     59  O   ALA    44      -1.930 -13.237 -11.908  1.00  0.00
ATOM     60  C   ALA    44      -1.148 -13.583 -11.024  1.00  0.00
ATOM     61  N   GLU    45      -1.511 -13.959  -9.806  1.00  0.00
ATOM     62  CA  GLU    45      -2.910 -13.989  -9.419  1.00  0.00
ATOM     63  CB  GLU    45      -3.067 -14.600  -8.025  1.00  0.00
ATOM     64  CG  GLU    45      -2.782 -16.092  -7.965  1.00  0.00
ATOM     65  CD  GLU    45      -2.826 -16.638  -6.552  1.00  0.00
ATOM     66  OE1 GLU    45      -3.009 -15.838  -5.612  1.00  0.00
ATOM     67  OE2 GLU    45      -2.678 -17.866  -6.385  1.00  0.00
ATOM     68  O   GLU    45      -4.629 -12.354  -9.793  1.00  0.00
ATOM     69  C   GLU    45      -3.485 -12.571  -9.395  1.00  0.00
ATOM     70  N   LEU    46      -2.666 -11.643  -8.924  1.00  0.00
ATOM     71  CA  LEU    46      -3.079 -10.253  -8.843  1.00  0.00
ATOM     72  CB  LEU    46      -1.985  -9.405  -8.189  1.00  0.00
ATOM     73  CG  LEU    46      -1.745  -9.645  -6.698  1.00  0.00
ATOM     74  CD1 LEU    46      -0.521  -8.878  -6.220  1.00  0.00
ATOM     75  CD2 LEU    46      -2.942  -9.187  -5.879  1.00  0.00
ATOM     76  O   LEU    46      -4.292  -8.965 -10.467  1.00  0.00
ATOM     77  C   LEU    46      -3.345  -9.720 -10.254  1.00  0.00
ATOM     78  N   GLU    47      -2.491 -10.135 -11.178  1.00  0.00
ATOM     79  CA  GLU    47      -2.622  -9.710 -12.562  1.00  0.00
ATOM     80  CB  GLU    47      -1.628 -10.463 -13.448  1.00  0.00
ATOM     81  CG  GLU    47      -1.664 -10.050 -14.910  1.00  0.00
ATOM     82  CD  GLU    47      -0.646 -10.794 -15.751  1.00  0.00
ATOM     83  OE1 GLU    47       0.102 -11.619 -15.188  1.00  0.00
ATOM     84  OE2 GLU    47      -0.595 -10.550 -16.976  1.00  0.00
ATOM     85  O   GLU    47      -4.749  -9.055 -13.461  1.00  0.00
ATOM     86  C   GLU    47      -4.032  -9.982 -13.088  1.00  0.00
ATOM     87  N   THR    48      -4.388 -11.259 -13.100  1.00  0.00
ATOM     88  CA  THR    48      -5.700 -11.665 -13.575  1.00  0.00
ATOM     89  CB  THR    48      -5.894 -13.188 -13.462  1.00  0.00
ATOM     90  CG2 THR    48      -7.289 -13.582 -13.928  1.00  0.00
ATOM     91  OG1 THR    48      -4.927 -13.859 -14.278  1.00  0.00
ATOM     92  O   THR    48      -7.884 -10.730 -13.219  1.00  0.00
ATOM     93  C   THR    48      -6.777 -10.973 -12.737  1.00  0.00
ATOM     94  N   TRP    49      -6.418 -10.673 -11.498  1.00  0.00
ATOM     95  CA  TRP    49      -7.339 -10.015 -10.588  1.00  0.00
ATOM     96  CB  TRP    49      -6.737  -9.929  -9.185  1.00  0.00
ATOM     97  CG  TRP    49      -7.636  -9.266  -8.187  1.00  0.00
ATOM     98  CD1 TRP    49      -8.632  -9.854  -7.461  1.00  0.00
ATOM     99  CD2 TRP    49      -7.622  -7.886  -7.803  1.00  0.00
ATOM    100  CE2 TRP    49      -8.635  -7.710  -6.841  1.00  0.00
ATOM    101  CE3 TRP    49      -6.850  -6.780  -8.178  1.00  0.00
ATOM    102  NE1 TRP    49      -9.239  -8.927  -6.649  1.00  0.00
ATOM    103  CZ2 TRP    49      -8.899  -6.475  -6.249  1.00  0.00
ATOM    104  CZ3 TRP    49      -7.114  -5.559  -7.588  1.00  0.00
ATOM    105  CH2 TRP    49      -8.128  -5.412  -6.635  1.00  0.00
ATOM    106  O   TRP    49      -8.774  -8.161 -11.107  1.00  0.00
ATOM    107  C   TRP    49      -7.625  -8.599 -11.096  1.00  0.00
ATOM    108  N   TRP    50      -6.561  -7.927 -11.505  1.00  0.00
ATOM    109  CA  TRP    50      -6.683  -6.570 -12.015  1.00  0.00
ATOM    110  CB  TRP    50      -5.300  -5.966 -12.266  1.00  0.00
ATOM    111  CG  TRP    50      -5.345  -4.562 -12.787  1.00  0.00
ATOM    112  CD1 TRP    50      -5.445  -3.417 -12.049  1.00  0.00
ATOM    113  CD2 TRP    50      -5.291  -4.152 -14.159  1.00  0.00
ATOM    114  CE2 TRP    50      -5.363  -2.746 -14.178  1.00  0.00
ATOM    115  CE3 TRP    50      -5.190  -4.838 -15.373  1.00  0.00
ATOM    116  NE1 TRP    50      -5.457  -2.320 -12.876  1.00  0.00
ATOM    117  CZ2 TRP    50      -5.337  -2.013 -15.363  1.00  0.00
ATOM    118  CZ3 TRP    50      -5.164  -4.107 -16.546  1.00  0.00
ATOM    119  CH2 TRP    50      -5.237  -2.710 -16.535  1.00  0.00
ATOM    120  O   TRP    50      -8.355  -5.770 -13.540  1.00  0.00
ATOM    121  C   TRP    50      -7.464  -6.591 -13.330  1.00  0.00
ATOM    122  N   GLU    51      -7.103  -7.541 -14.179  1.00  0.00
ATOM    123  CA  GLU    51      -7.759  -7.680 -15.469  1.00  0.00
ATOM    124  CB  GLU    51      -7.088  -8.779 -16.295  1.00  0.00
ATOM    125  CG  GLU    51      -7.672  -8.951 -17.688  1.00  0.00
ATOM    126  CD  GLU    51      -6.945 -10.007 -18.498  1.00  0.00
ATOM    127  OE1 GLU    51      -5.972 -10.591 -17.976  1.00  0.00
ATOM    128  OE2 GLU    51      -7.348 -10.251 -19.654  1.00  0.00
ATOM    129  O   GLU    51     -10.107  -7.551 -15.955  1.00  0.00
ATOM    130  C   GLU    51      -9.228  -8.047 -15.251  1.00  0.00
ATOM    131  N   GLU    52      -9.451  -8.911 -14.273  1.00  0.00
ATOM    132  CA  GLU    52     -10.799  -9.350 -13.953  1.00  0.00
ATOM    133  CB  GLU    52     -10.784 -10.300 -12.754  1.00  0.00
ATOM    134  CG  GLU    52     -12.149 -10.858 -12.387  1.00  0.00
ATOM    135  CD  GLU    52     -12.087 -11.839 -11.232  1.00  0.00
ATOM    136  OE1 GLU    52     -10.971 -12.095 -10.731  1.00  0.00
ATOM    137  OE2 GLU    52     -13.152 -12.350 -10.828  1.00  0.00
ATOM    138  O   GLU    52     -12.860  -8.120 -13.959  1.00  0.00
ATOM    139  C   GLU    52     -11.681  -8.148 -13.610  1.00  0.00
ATOM    140  N   LEU    53     -11.076  -7.184 -12.932  1.00  0.00
ATOM    141  CA  LEU    53     -11.791  -5.983 -12.538  1.00  0.00
ATOM    142  CB  LEU    53     -10.927  -5.124 -11.612  1.00  0.00
ATOM    143  CG  LEU    53     -10.637  -5.703 -10.227  1.00  0.00
ATOM    144  CD1 LEU    53      -9.649  -4.827  -9.473  1.00  0.00
ATOM    145  CD2 LEU    53     -11.913  -5.795  -9.405  1.00  0.00
ATOM    146  O   LEU    53     -13.112  -4.415 -13.788  1.00  0.00
ATOM    147  C   LEU    53     -12.143  -5.172 -13.787  1.00  0.00
ATOM    148  N   GLN    54     -11.336  -5.357 -14.821  1.00  0.00
ATOM    149  CA  GLN    54     -11.548  -4.652 -16.073  1.00  0.00
ATOM    150  CB  GLN    54     -10.212  -4.362 -16.760  1.00  0.00
ATOM    151  CG  GLN    54      -9.301  -3.430 -15.975  1.00  0.00
ATOM    152  CD  GLN    54      -8.011  -3.124 -16.710  1.00  0.00
ATOM    153  OE1 GLN    54      -7.085  -3.935 -16.723  1.00  0.00
ATOM    154  NE2 GLN    54      -7.945  -1.949 -17.324  1.00  0.00
ATOM    155  O   GLN    54     -12.553  -5.209 -18.183  1.00  0.00
ATOM    156  C   GLN    54     -12.408  -5.515 -16.999  1.00  0.00
ATOM    157  N   LYS    55     -12.955  -6.577 -16.427  1.00  0.00
ATOM    158  CA  LYS    55     -13.796  -7.486 -17.186  1.00  0.00
ATOM    159  CB  LYS    55     -14.081  -8.754 -16.379  1.00  0.00
ATOM    160  CG  LYS    55     -14.893  -9.797 -17.126  1.00  0.00
ATOM    161  CD  LYS    55     -15.054 -11.066 -16.304  1.00  0.00
ATOM    162  CE  LYS    55     -15.862 -12.113 -17.055  1.00  0.00
ATOM    163  NZ  LYS    55     -16.014 -13.367 -16.267  1.00  0.00
ATOM    164  O   LYS    55     -15.747  -7.138 -18.541  1.00  0.00
ATOM    165  C   LYS    55     -15.129  -6.817 -17.528  1.00  0.00
ATOM    166  N   ASN    56     -15.532  -5.899 -16.662  1.00  0.00
ATOM    167  CA  ASN    56     -16.780  -5.181 -16.859  1.00  0.00
ATOM    168  CB  ASN    56     -17.884  -5.776 -15.982  1.00  0.00
ATOM    169  CG  ASN    56     -19.260  -5.246 -16.338  1.00  0.00
ATOM    170  ND2 ASN    56     -20.143  -5.185 -15.349  1.00  0.00
ATOM    171  OD1 ASN    56     -19.522  -4.897 -17.489  1.00  0.00
ATOM    172  O   ASN    56     -17.372  -3.147 -15.728  1.00  0.00
ATOM    173  C   ASN    56     -16.583  -3.711 -16.485  1.00  0.00
ATOM    174  N   PRO    57     -15.525  -3.130 -17.034  1.00  0.00
ATOM    175  CA  PRO    57     -15.215  -1.735 -16.768  1.00  0.00
ATOM    176  CB  PRO    57     -13.914  -1.493 -17.536  1.00  0.00
ATOM    177  CG  PRO    57     -13.965  -2.458 -18.674  1.00  0.00
ATOM    178  CD  PRO    57     -14.645  -3.689 -18.144  1.00  0.00
ATOM    179  O   PRO    57     -17.502  -1.253 -17.317  1.00  0.00
ATOM    180  C   PRO    57     -16.345  -0.835 -17.268  1.00  0.00
ATOM    181  N   PRO    58     -15.972   0.385 -17.627  1.00  0.00
ATOM    182  CA  PRO    58     -16.940   1.348 -18.123  1.00  0.00
ATOM    183  CB  PRO    58     -17.559   1.938 -16.854  1.00  0.00
ATOM    184  CG  PRO    58     -17.375   0.877 -15.820  1.00  0.00
ATOM    185  CD  PRO    58     -16.043   0.242 -16.109  1.00  0.00
ATOM    186  O   PRO    58     -15.030   2.654 -18.762  1.00  0.00
ATOM    187  C   PRO    58     -16.218   2.406 -18.958  1.00  0.00
ATOM    188  N   TYR    59     -16.967   3.003 -19.874  1.00  0.00
ATOM    189  CA  TYR    59     -16.412   4.030 -20.741  1.00  0.00
ATOM    190  CB  TYR    59     -17.314   4.247 -21.958  1.00  0.00
ATOM    191  CG  TYR    59     -16.819   5.319 -22.902  1.00  0.00
ATOM    192  CD1 TYR    59     -15.747   5.081 -23.750  1.00  0.00
ATOM    193  CD2 TYR    59     -17.427   6.569 -22.940  1.00  0.00
ATOM    194  CE1 TYR    59     -15.288   6.055 -24.618  1.00  0.00
ATOM    195  CE2 TYR    59     -16.982   7.555 -23.800  1.00  0.00
ATOM    196  CZ  TYR    59     -15.904   7.287 -24.641  1.00  0.00
ATOM    197  OH  TYR    59     -15.448   8.260 -25.504  1.00  0.00
ATOM    198  O   TYR    59     -15.256   5.993 -19.985  1.00  0.00
ATOM    199  C   TYR    59     -16.299   5.341 -19.962  1.00  0.00
ATOM    200  N   GLU    60     -17.386   5.691 -19.292  1.00  0.00
ATOM    201  CA  GLU    60     -17.422   6.914 -18.508  1.00  0.00
ATOM    202  CB  GLU    60     -18.857   7.430 -18.385  1.00  0.00
ATOM    203  CG  GLU    60     -19.468   7.886 -19.700  1.00  0.00
ATOM    204  CD  GLU    60     -20.901   8.355 -19.546  1.00  0.00
ATOM    205  OE1 GLU    60     -21.404   8.364 -18.403  1.00  0.00
ATOM    206  OE2 GLU    60     -21.522   8.713 -20.568  1.00  0.00
ATOM    207  O   GLU    60     -16.918   7.541 -16.245  1.00  0.00
ATOM    208  C   GLU    60     -16.875   6.658 -17.101  1.00  0.00
ATOM    209  N   PRO    61     -16.372   5.448 -16.908  1.00  0.00
ATOM    210  CA  PRO    61     -15.817   5.066 -15.621  1.00  0.00
ATOM    211  CB  PRO    61     -17.045   4.901 -14.723  1.00  0.00
ATOM    212  CG  PRO    61     -18.150   4.543 -15.661  1.00  0.00
ATOM    213  CD  PRO    61     -17.876   5.298 -16.932  1.00  0.00
ATOM    214  O   PRO    61     -15.397   2.743 -15.189  1.00  0.00
ATOM    215  C   PRO    61     -15.035   3.761 -15.774  1.00  0.00
ATOM    216  N   PRO    62     -13.945   3.836 -16.586  1.00  0.00
ATOM    217  CA  PRO    62     -13.107   2.674 -16.825  1.00  0.00
ATOM    218  CB  PRO    62     -12.269   3.065 -18.044  1.00  0.00
ATOM    219  CG  PRO    62     -12.177   4.552 -17.973  1.00  0.00
ATOM    220  CD  PRO    62     -13.497   5.026 -17.429  1.00  0.00
ATOM    221  O   PRO    62     -11.948   3.264 -14.808  1.00  0.00
ATOM    222  C   PRO    62     -12.226   2.375 -15.611  1.00  0.00
ATOM    223  N   ASP    63     -11.808   1.121 -15.518  1.00  0.00
ATOM    224  CA  ASP    63     -10.963   0.695 -14.416  1.00  0.00
ATOM    225  CB  ASP    63     -11.145  -0.800 -14.148  1.00  0.00
ATOM    226  CG  ASP    63     -10.509  -1.240 -12.844  1.00  0.00
ATOM    227  OD1 ASP    63     -10.097  -0.362 -12.057  1.00  0.00
ATOM    228  OD2 ASP    63     -10.421  -2.464 -12.609  1.00  0.00
ATOM    229  O   ASP    63      -8.681   0.018 -14.733  1.00  0.00
ATOM    230  C   ASP    63      -9.486   0.948 -14.727  1.00  0.00
ATOM    231  N   GLN    64      -9.175   2.212 -14.978  1.00  0.00
ATOM    232  CA  GLN    64      -7.811   2.599 -15.290  1.00  0.00
ATOM    233  CB  GLN    64      -7.747   4.079 -15.679  1.00  0.00
ATOM    234  CG  GLN    64      -8.533   4.424 -16.933  1.00  0.00
ATOM    235  CD  GLN    64      -8.032   3.686 -18.157  1.00  0.00
ATOM    236  OE1 GLN    64      -6.842   3.727 -18.474  1.00  0.00
ATOM    237  NE2 GLN    64      -8.938   3.005 -18.849  1.00  0.00
ATOM    238  O   GLN    64      -7.401   2.125 -12.973  1.00  0.00
ATOM    239  C   GLN    64      -6.912   2.373 -14.074  1.00  0.00
ATOM    240  N   VAL    65      -5.612   2.470 -14.312  1.00  0.00
ATOM    241  CA  VAL    65      -4.640   2.279 -13.249  1.00  0.00
ATOM    242  CB  VAL    65      -3.251   2.807 -13.653  1.00  0.00
ATOM    243  CG1 VAL    65      -3.277   4.322 -13.797  1.00  0.00
ATOM    244  CG2 VAL    65      -2.216   2.444 -12.599  1.00  0.00
ATOM    245  O   VAL    65      -4.898   2.567 -10.879  1.00  0.00
ATOM    246  C   VAL    65      -5.103   3.032 -12.000  1.00  0.00
ATOM    247  N   GLU    66      -5.718   4.182 -12.234  1.00  0.00
ATOM    248  CA  GLU    66      -6.212   5.004 -11.142  1.00  0.00
ATOM    249  CB  GLU    66      -6.766   6.327 -11.676  1.00  0.00
ATOM    250  CG  GLU    66      -5.704   7.272 -12.213  1.00  0.00
ATOM    251  CD  GLU    66      -6.300   8.507 -12.861  1.00  0.00
ATOM    252  OE1 GLU    66      -7.543   8.590 -12.953  1.00  0.00
ATOM    253  OE2 GLU    66      -5.522   9.392 -13.278  1.00  0.00
ATOM    254  O   GLU    66      -7.313   4.202  -9.166  1.00  0.00
ATOM    255  C   GLU    66      -7.329   4.274 -10.393  1.00  0.00
ATOM    256  N   LEU    67      -8.272   3.753 -11.163  1.00  0.00
ATOM    257  CA  LEU    67      -9.395   3.032 -10.588  1.00  0.00
ATOM    258  CB  LEU    67     -10.352   2.566 -11.687  1.00  0.00
ATOM    259  CG  LEU    67     -11.778   2.226 -11.246  1.00  0.00
ATOM    260  CD1 LEU    67     -11.844   0.815 -10.685  1.00  0.00
ATOM    261  CD2 LEU    67     -12.250   3.190 -10.168  1.00  0.00
ATOM    262  O   LEU    67      -8.957   1.770  -8.593  1.00  0.00
ATOM    263  C   LEU    67      -8.900   1.804  -9.820  1.00  0.00
ATOM    264  N   LEU    68      -8.428   0.825 -10.577  1.00  0.00
ATOM    265  CA  LEU    68      -7.924  -0.402  -9.983  1.00  0.00
ATOM    266  CB  LEU    68      -7.059  -1.167 -10.987  1.00  0.00
ATOM    267  CG  LEU    68      -6.508  -2.516 -10.517  1.00  0.00
ATOM    268  CD1 LEU    68      -7.642  -3.484 -10.215  1.00  0.00
ATOM    269  CD2 LEU    68      -5.625  -3.138 -11.588  1.00  0.00
ATOM    270  O   LEU    68      -7.230  -0.675  -7.701  1.00  0.00
ATOM    271  C   LEU    68      -7.077  -0.059  -8.755  1.00  0.00
ATOM    272  N   ALA    69      -6.204   0.921  -8.933  1.00  0.00
ATOM    273  CA  ALA    69      -5.335   1.353  -7.852  1.00  0.00
ATOM    274  CB  ALA    69      -4.471   2.520  -8.301  1.00  0.00
ATOM    275  O   ALA    69      -5.874   1.468  -5.516  1.00  0.00
ATOM    276  C   ALA    69      -6.188   1.791  -6.660  1.00  0.00
ATOM    277  N   GLN    70      -7.250   2.520  -6.969  1.00  0.00
ATOM    278  CA  GLN    70      -8.151   3.006  -5.938  1.00  0.00
ATOM    279  CB  GLN    70      -9.216   3.921  -6.545  1.00  0.00
ATOM    280  CG  GLN    70     -10.130   4.573  -5.520  1.00  0.00
ATOM    281  CD  GLN    70      -9.382   5.488  -4.572  1.00  0.00
ATOM    282  OE1 GLN    70      -8.546   6.289  -4.993  1.00  0.00
ATOM    283  NE2 GLN    70      -9.679   5.373  -3.283  1.00  0.00
ATOM    284  O   GLN    70      -9.043   1.814  -4.054  1.00  0.00
ATOM    285  C   GLN    70      -8.839   1.815  -5.266  1.00  0.00
ATOM    286  N   GLU    71      -9.179   0.830  -6.085  1.00  0.00
ATOM    287  CA  GLU    71      -9.841  -0.363  -5.586  1.00  0.00
ATOM    288  CB  GLU    71      -9.922  -1.428  -6.680  1.00  0.00
ATOM    289  CG  GLU    71     -10.930  -1.118  -7.776  1.00  0.00
ATOM    290  CD  GLU    71     -12.349  -1.016  -7.248  1.00  0.00
ATOM    291  OE1 GLU    71     -12.795  -1.954  -6.557  1.00  0.00
ATOM    292  OE2 GLU    71     -13.014   0.004  -7.528  1.00  0.00
ATOM    293  O   GLU    71      -9.629  -1.306  -3.388  1.00  0.00
ATOM    294  C   GLU    71      -9.049  -0.922  -4.402  1.00  0.00
ATOM    295  N   LEU    72      -7.735  -0.952  -4.570  1.00  0.00
ATOM    296  CA  LEU    72      -6.858  -1.457  -3.529  1.00  0.00
ATOM    297  CB  LEU    72      -5.394  -1.200  -3.890  1.00  0.00
ATOM    298  CG  LEU    72      -4.827  -2.023  -5.050  1.00  0.00
ATOM    299  CD1 LEU    72      -3.426  -1.551  -5.408  1.00  0.00
ATOM    300  CD2 LEU    72      -4.753  -3.496  -4.677  1.00  0.00
ATOM    301  O   LEU    72      -7.114  -1.360  -1.144  1.00  0.00
ATOM    302  C   LEU    72      -7.177  -0.750  -2.210  1.00  0.00
ATOM    303  N   SER    73      -7.515   0.527  -2.327  1.00  0.00
ATOM    304  CA  SER    73      -7.844   1.322  -1.157  1.00  0.00
ATOM    305  CB  SER    73      -8.268   2.733  -1.570  1.00  0.00
ATOM    306  OG  SER    73      -7.197   3.426  -2.188  1.00  0.00
ATOM    307  O   SER    73      -9.239   0.965   0.765  1.00  0.00
ATOM    308  C   SER    73      -8.997   0.657  -0.401  1.00  0.00
ATOM    309  N   GLN    74      -9.677  -0.244  -1.096  1.00  0.00
ATOM    310  CA  GLN    74     -10.797  -0.955  -0.505  1.00  0.00
ATOM    311  CB  GLN    74     -11.469  -1.854  -1.545  1.00  0.00
ATOM    312  CG  GLN    74     -12.164  -1.096  -2.664  1.00  0.00
ATOM    313  CD  GLN    74     -12.752  -2.018  -3.714  1.00  0.00
ATOM    314  OE1 GLN    74     -12.603  -3.237  -3.638  1.00  0.00
ATOM    315  NE2 GLN    74     -13.427  -1.437  -4.700  1.00  0.00
ATOM    316  O   GLN    74     -11.116  -2.517   1.291  1.00  0.00
ATOM    317  C   GLN    74     -10.318  -1.829   0.657  1.00  0.00
ATOM    321  N   ARG    79      -0.475   2.752  -7.492  1.00  0.00
ATOM    322  CA  ARG    79      -0.345   3.376  -8.797  1.00  0.00
ATOM    323  CB  ARG    79      -0.147   4.885  -8.652  1.00  0.00
ATOM    324  CG  ARG    79      -1.383   5.632  -8.179  1.00  0.00
ATOM    325  CD  ARG    79      -1.103   7.116  -8.013  1.00  0.00
ATOM    326  NE  ARG    79      -2.269   7.841  -7.512  1.00  0.00
ATOM    327  CZ  ARG    79      -2.276   9.139  -7.226  1.00  0.00
ATOM    328  NH1 ARG    79      -3.382   9.713  -6.775  1.00  0.00
ATOM    329  NH2 ARG    79      -1.176   9.860  -7.391  1.00  0.00
ATOM    330  O   ARG    79       0.759   2.471 -10.727  1.00  0.00
ATOM    331  C   ARG    79       0.858   2.797  -9.546  1.00  0.00
ATOM    332  N   LYS    80       1.966   2.688  -8.825  1.00  0.00
ATOM    333  CA  LYS    80       3.186   2.154  -9.407  1.00  0.00
ATOM    334  CB  LYS    80       4.314   2.150  -8.374  1.00  0.00
ATOM    335  CG  LYS    80       5.635   1.608  -8.899  1.00  0.00
ATOM    336  CD  LYS    80       6.718   1.667  -7.836  1.00  0.00
ATOM    337  CE  LYS    80       8.033   1.110  -8.355  1.00  0.00
ATOM    338  NZ  LYS    80       9.097   1.132  -7.314  1.00  0.00
ATOM    339  O   LYS    80       3.193   0.408 -11.055  1.00  0.00
ATOM    340  C   LYS    80       2.961   0.719  -9.888  1.00  0.00
ATOM    341  N   GLN    81       2.511  -0.117  -8.963  1.00  0.00
ATOM    342  CA  GLN    81       2.252  -1.512  -9.279  1.00  0.00
ATOM    343  CB  GLN    81       1.750  -2.258  -8.040  1.00  0.00
ATOM    344  CG  GLN    81       2.813  -2.470  -6.972  1.00  0.00
ATOM    345  CD  GLN    81       2.254  -3.108  -5.716  1.00  0.00
ATOM    346  OE1 GLN    81       1.046  -3.318  -5.599  1.00  0.00
ATOM    347  NE2 GLN    81       3.134  -3.421  -4.771  1.00  0.00
ATOM    348  O   GLN    81       1.327  -2.424 -11.298  1.00  0.00
ATOM    349  C   GLN    81       1.190  -1.622 -10.375  1.00  0.00
ATOM    350  N   LEU    82       0.156  -0.807 -10.236  1.00  0.00
ATOM    351  CA  LEU    82      -0.929  -0.803 -11.204  1.00  0.00
ATOM    352  CB  LEU    82      -2.024   0.177 -10.777  1.00  0.00
ATOM    353  CG  LEU    82      -2.838  -0.212  -9.542  1.00  0.00
ATOM    354  CD1 LEU    82      -3.759   0.924  -9.125  1.00  0.00
ATOM    355  CD2 LEU    82      -3.693  -1.437  -9.825  1.00  0.00
ATOM    356  O   LEU    82      -0.733  -0.977 -13.590  1.00  0.00
ATOM    357  C   LEU    82      -0.387  -0.382 -12.571  1.00  0.00
ATOM    358  N   GLU    83       0.457   0.641 -12.549  1.00  0.00
ATOM    359  CA  GLU    83       1.051   1.147 -13.774  1.00  0.00
ATOM    360  CB  GLU    83       2.062   2.252 -13.461  1.00  0.00
ATOM    361  CG  GLU    83       2.690   2.885 -14.692  1.00  0.00
ATOM    362  CD  GLU    83       3.641   4.014 -14.346  1.00  0.00
ATOM    363  OE1 GLU    83       3.795   4.313 -13.144  1.00  0.00
ATOM    364  OE2 GLU    83       4.233   4.600 -15.277  1.00  0.00
ATOM    365  O   GLU    83       1.674  -0.115 -15.719  1.00  0.00
ATOM    366  C   GLU    83       1.768   0.006 -14.498  1.00  0.00
ATOM    367  N   GLU    84       2.469  -0.801 -13.716  1.00  0.00
ATOM    368  CA  GLU    84       3.202  -1.927 -14.267  1.00  0.00
ATOM    369  CB  GLU    84       3.990  -2.643 -13.168  1.00  0.00
ATOM    370  CG  GLU    84       4.825  -3.812 -13.664  1.00  0.00
ATOM    371  CD  GLU    84       5.617  -4.475 -12.554  1.00  0.00
ATOM    372  OE1 GLU    84       5.522  -4.011 -11.397  1.00  0.00
ATOM    373  OE2 GLU    84       6.332  -5.459 -12.840  1.00  0.00
ATOM    374  O   GLU    84       2.440  -3.400 -16.003  1.00  0.00
ATOM    375  C   GLU    84       2.215  -2.913 -14.896  1.00  0.00
ATOM    376  N   LEU    85       1.144  -3.177 -14.164  1.00  0.00
ATOM    377  CA  LEU    85       0.122  -4.096 -14.637  1.00  0.00
ATOM    378  CB  LEU    85      -0.905  -4.369 -13.537  1.00  0.00
ATOM    379  CG  LEU    85      -0.413  -5.178 -12.334  1.00  0.00
ATOM    380  CD1 LEU    85      -1.473  -5.221 -11.244  1.00  0.00
ATOM    381  CD2 LEU    85      -0.095  -6.608 -12.743  1.00  0.00
ATOM    382  O   LEU    85      -0.898  -4.236 -16.805  1.00  0.00
ATOM    383  C   LEU    85      -0.617  -3.520 -15.846  1.00  0.00
ATOM    384  N   ASN    86      -0.910  -2.231 -15.760  1.00  0.00
ATOM    385  CA  ASN    86      -1.611  -1.550 -16.835  1.00  0.00
ATOM    386  CB  ASN    86      -1.548  -0.034 -16.641  1.00  0.00
ATOM    387  CG  ASN    86      -2.390   0.720 -17.652  1.00  0.00
ATOM    388  ND2 ASN    86      -1.736   1.531 -18.477  1.00  0.00
ATOM    389  OD1 ASN    86      -3.611   0.572 -17.690  1.00  0.00
ATOM    390  O   ASN    86      -1.680  -2.117 -19.168  1.00  0.00
ATOM    391  C   ASN    86      -0.975  -1.892 -18.184  1.00  0.00
ATOM    392  N   LYS    87       0.349  -1.923 -18.188  1.00  0.00
ATOM    393  CA  LYS    87       1.087  -2.236 -19.399  1.00  0.00
ATOM    394  CB  LYS    87       2.576  -1.935 -19.212  1.00  0.00
ATOM    395  CG  LYS    87       2.904  -0.453 -19.127  1.00  0.00
ATOM    396  CD  LYS    87       4.396  -0.226 -18.947  1.00  0.00
ATOM    397  CE  LYS    87       4.719   1.255 -18.828  1.00  0.00
ATOM    398  NZ  LYS    87       6.175   1.490 -18.627  1.00  0.00
ATOM    399  O   LYS    87       0.826  -4.074 -20.921  1.00  0.00
ATOM    400  C   LYS    87       0.932  -3.717 -19.748  1.00  0.00
ATOM    401  N   THR    88       0.923  -4.539 -18.710  1.00  0.00
ATOM    402  CA  THR    88       0.782  -5.974 -18.893  1.00  0.00
ATOM    403  CB  THR    88       0.986  -6.735 -17.568  1.00  0.00
ATOM    404  CG2 THR    88       0.817  -8.231 -17.782  1.00  0.00
ATOM    405  OG1 THR    88       2.306  -6.483 -17.068  1.00  0.00
ATOM    406  O   THR    88      -0.820  -7.412 -19.957  1.00  0.00
ATOM    407  C   THR    88      -0.612  -6.326 -19.419  1.00  0.00
ATOM    408  N   LEU    89      -1.530  -5.387 -19.244  1.00  0.00
ATOM    409  CA  LEU    89      -2.897  -5.584 -19.693  1.00  0.00
ATOM    410  CB  LEU    89      -3.729  -6.258 -18.601  1.00  0.00
ATOM    411  CG  LEU    89      -3.324  -7.684 -18.224  1.00  0.00
ATOM    412  CD1 LEU    89      -4.113  -8.168 -17.017  1.00  0.00
ATOM    413  CD2 LEU    89      -3.584  -8.641 -19.377  1.00  0.00
ATOM    414  O   LEU    89      -3.803  -3.939 -21.190  1.00  0.00
ATOM    415  C   LEU    89      -3.519  -4.227 -20.028  1.00  0.00
TER
END



