
PFRMAT TS
TARGET T0361
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0361 model 2 Thu Jul  6 14:55:00 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  2
PARENT N/A
ATOM      2  N   ASP    81      13.191  13.569 -19.748  1.00  0.00
ATOM      3  CA  ASP    81      12.049  12.682 -19.562  1.00  0.00
ATOM      4  CB  ASP    81      11.582  12.120 -20.906  1.00  0.00
ATOM      5  CG  ASP    81      10.875  13.156 -21.756  1.00  0.00
ATOM      6  OD1 ASP    81      10.536  14.233 -21.221  1.00  0.00
ATOM      7  OD2 ASP    81      10.659  12.892 -22.958  1.00  0.00
ATOM      8  O   ASP    81      11.589  11.133 -17.789  1.00  0.00
ATOM      9  C   ASP    81      12.380  11.490 -18.654  1.00  0.00
ATOM     10  N   LYS    82      13.550  10.866 -18.847  1.00  0.00
ATOM     11  CA  LYS    82      13.963   9.720 -18.019  1.00  0.00
ATOM     12  CB  LYS    82      15.340   9.214 -18.455  1.00  0.00
ATOM     13  CG  LYS    82      15.830   8.002 -17.679  1.00  0.00
ATOM     14  CD  LYS    82      17.167   7.511 -18.210  1.00  0.00
ATOM     15  CE  LYS    82      17.680   6.330 -17.401  1.00  0.00
ATOM     16  NZ  LYS    82      19.002   5.852 -17.895  1.00  0.00
ATOM     17  O   LYS    82      13.501   9.575 -15.661  1.00  0.00
ATOM     18  C   LYS    82      14.014  10.207 -16.570  1.00  0.00
ATOM     19  N   TRP    83      14.612  11.364 -16.367  1.00  0.00
ATOM     20  CA  TRP    83      14.694  11.889 -15.026  1.00  0.00
ATOM     21  CB  TRP    83      15.422  13.235 -15.022  1.00  0.00
ATOM     22  CG  TRP    83      15.540  13.847 -13.659  1.00  0.00
ATOM     23  CD1 TRP    83      14.860  14.933 -13.187  1.00  0.00
ATOM     24  CD2 TRP    83      16.392  13.410 -12.593  1.00  0.00
ATOM     25  CE2 TRP    83      16.175  14.277 -11.504  1.00  0.00
ATOM     26  CE3 TRP    83      17.317  12.371 -12.453  1.00  0.00
ATOM     27  NE1 TRP    83      15.235  15.198 -11.891  1.00  0.00
ATOM     28  CZ2 TRP    83      16.848  14.137 -10.291  1.00  0.00
ATOM     29  CZ3 TRP    83      17.982  12.235 -11.247  1.00  0.00
ATOM     30  CH2 TRP    83      17.745  13.111 -10.182  1.00  0.00
ATOM     31  O   TRP    83      13.068  11.734 -13.273  1.00  0.00
ATOM     32  C   TRP    83      13.305  12.101 -14.425  1.00  0.00
ATOM     33  N   LEU    84      12.374  12.663 -15.205  1.00  0.00
ATOM     34  CA  LEU    84      11.052  12.879 -14.676  1.00  0.00
ATOM     35  CB  LEU    84      10.158  13.540 -15.727  1.00  0.00
ATOM     36  CG  LEU    84      10.476  14.997 -16.071  1.00  0.00
ATOM     37  CD1 LEU    84       9.644  15.465 -17.254  1.00  0.00
ATOM     38  CD2 LEU    84      10.177  15.906 -14.889  1.00  0.00
ATOM     39  O   LEU    84      10.023  11.356 -13.174  1.00  0.00
ATOM     40  C   LEU    84      10.488  11.540 -14.295  1.00  0.00
ATOM     41  N   TYR    85      10.554  10.587 -15.215  1.00  0.00
ATOM     42  CA  TYR    85      10.019   9.258 -14.947  1.00  0.00
ATOM     43  CB  TYR    85      10.304   8.318 -16.120  1.00  0.00
ATOM     44  CG  TYR    85       9.534   8.657 -17.377  1.00  0.00
ATOM     45  CD1 TYR    85       8.444   9.516 -17.334  1.00  0.00
ATOM     46  CD2 TYR    85       9.901   8.116 -18.603  1.00  0.00
ATOM     47  CE1 TYR    85       7.735   9.831 -18.477  1.00  0.00
ATOM     48  CE2 TYR    85       9.205   8.420 -19.756  1.00  0.00
ATOM     49  CZ  TYR    85       8.114   9.285 -19.685  1.00  0.00
ATOM     50  OH  TYR    85       7.409   9.598 -20.824  1.00  0.00
ATOM     51  O   TYR    85       9.909   7.812 -13.039  1.00  0.00
ATOM     52  C   TYR    85      10.594   8.569 -13.698  1.00  0.00
ATOM     53  N   ALA    86      11.847   8.833 -13.360  1.00  0.00
ATOM     54  CA  ALA    86      12.411   8.186 -12.185  1.00  0.00
ATOM     55  CB  ALA    86      13.921   8.364 -12.155  1.00  0.00
ATOM     56  O   ALA    86      11.557   8.045  -9.984  1.00  0.00
ATOM     57  C   ALA    86      11.843   8.774 -10.949  1.00  0.00
ATOM     58  N   ASP    87      11.714  10.105 -10.982  1.00  0.00
ATOM     59  CA  ASP    87      11.140  10.884  -9.891  1.00  0.00
ATOM     60  CB  ASP    87      11.013  12.354 -10.293  1.00  0.00
ATOM     61  CG  ASP    87      12.351  13.063 -10.342  1.00  0.00
ATOM     62  OD1 ASP    87      13.346  12.489  -9.850  1.00  0.00
ATOM     63  OD2 ASP    87      12.407  14.192 -10.874  1.00  0.00
ATOM     64  O   ASP    87       9.418  10.167  -8.389  1.00  0.00
ATOM     65  C   ASP    87       9.755  10.338  -9.554  1.00  0.00
ATOM     66  N   ILE    88       8.950  10.099 -10.591  1.00  0.00
ATOM     67  CA  ILE    88       7.630   9.568 -10.391  1.00  0.00
ATOM     68  CB  ILE    88       6.869   9.436 -11.723  1.00  0.00
ATOM     69  CG1 ILE    88       6.563  10.819 -12.303  1.00  0.00
ATOM     70  CG2 ILE    88       5.554   8.701 -11.514  1.00  0.00
ATOM     71  CD1 ILE    88       6.058  10.785 -13.728  1.00  0.00
ATOM     72  O   ILE    88       6.881   7.945  -8.832  1.00  0.00
ATOM     73  C   ILE    88       7.658   8.191  -9.757  1.00  0.00
ATOM     74  N   THR    89       8.536   7.291 -10.213  1.00  0.00
ATOM     75  CA  THR    89       8.615   5.939  -9.614  1.00  0.00
ATOM     76  CB  THR    89       9.721   5.094 -10.270  1.00  0.00
ATOM     77  CG2 THR    89       9.773   3.706  -9.649  1.00  0.00
ATOM     78  OG1 THR    89       9.459   4.964 -11.674  1.00  0.00
ATOM     79  O   THR    89       8.319   5.380  -7.240  1.00  0.00
ATOM     80  C   THR    89       8.926   6.055  -8.095  1.00  0.00
ATOM     81  N   HIS    90       6.351   5.570  -2.501  1.00  0.00
ATOM     82  CA  HIS    90       6.057   6.314  -1.289  1.00  0.00
ATOM     83  CB  HIS    90       6.629   7.731  -1.378  1.00  0.00
ATOM     84  CG  HIS    90       8.124   7.779  -1.394  1.00  0.00
ATOM     85  CD2 HIS    90       9.166   8.012  -0.404  1.00  0.00
ATOM     86  ND1 HIS    90       8.862   7.578  -2.540  1.00  0.00
ATOM     87  CE1 HIS    90      10.171   7.682  -2.241  1.00  0.00
ATOM     88  NE2 HIS    90      10.359   7.942  -0.963  1.00  0.00
ATOM     89  O   HIS    90       3.994   5.946  -0.084  1.00  0.00
ATOM     90  C   HIS    90       4.522   6.399  -1.101  1.00  0.00
ATOM     91  N   PHE    91       3.789   6.940  -2.074  1.00  0.00
ATOM     92  CA  PHE    91       2.372   7.013  -1.853  1.00  0.00
ATOM     93  CB  PHE    91       1.671   7.617  -3.071  1.00  0.00
ATOM     94  CG  PHE    91       1.788   9.112  -3.157  1.00  0.00
ATOM     95  CD1 PHE    91       2.700   9.701  -4.015  1.00  0.00
ATOM     96  CD2 PHE    91       0.986   9.931  -2.381  1.00  0.00
ATOM     97  CE1 PHE    91       2.807  11.076  -4.095  1.00  0.00
ATOM     98  CE2 PHE    91       1.093  11.305  -2.460  1.00  0.00
ATOM     99  CZ  PHE    91       1.999  11.880  -3.314  1.00  0.00
ATOM    100  O   PHE    91       0.779   5.634  -0.723  1.00  0.00
ATOM    101  C   PHE    91       1.651   5.691  -1.591  1.00  0.00
ATOM    102  N   SER    92       1.999   4.622  -2.297  1.00  0.00
ATOM    103  CA  SER    92       1.334   3.332  -2.052  1.00  0.00
ATOM    104  CB  SER    92       1.795   2.289  -3.072  1.00  0.00
ATOM    105  OG  SER    92       3.172   1.994  -2.912  1.00  0.00
ATOM    106  O   SER    92       0.789   2.193  -0.009  1.00  0.00
ATOM    107  C   SER    92       1.642   2.782  -0.654  1.00  0.00
ATOM    108  N   GLN    93       2.873   2.957  -0.202  1.00  0.00
ATOM    109  CA  GLN    93       3.246   2.484   1.105  1.00  0.00
ATOM    110  CB  GLN    93       4.723   2.774   1.378  1.00  0.00
ATOM    111  CG  GLN    93       5.683   1.925   0.561  1.00  0.00
ATOM    112  CD  GLN    93       7.131   2.329   0.759  1.00  0.00
ATOM    113  OE1 GLN    93       7.425   3.303   1.451  1.00  0.00
ATOM    114  NE2 GLN    93       8.043   1.579   0.149  1.00  0.00
ATOM    115  O   GLN    93       1.780   2.576   2.993  1.00  0.00
ATOM    116  C   GLN    93       2.391   3.201   2.129  1.00  0.00
ATOM    117  N   TYR    94       2.339   4.519   2.021  1.00  0.00
ATOM    118  CA  TYR    94       1.568   5.357   2.937  1.00  0.00
ATOM    119  CB  TYR    94       1.631   6.824   2.505  1.00  0.00
ATOM    120  CG  TYR    94       0.823   7.755   3.379  1.00  0.00
ATOM    121  CD1 TYR    94       1.317   8.189   4.602  1.00  0.00
ATOM    122  CD2 TYR    94      -0.431   8.197   2.978  1.00  0.00
ATOM    123  CE1 TYR    94       0.585   9.040   5.408  1.00  0.00
ATOM    124  CE2 TYR    94      -1.177   9.049   3.770  1.00  0.00
ATOM    125  CZ  TYR    94      -0.659   9.470   4.993  1.00  0.00
ATOM    126  OH  TYR    94      -1.388  10.318   5.794  1.00  0.00
ATOM    127  O   TYR    94      -0.505   4.703   4.031  1.00  0.00
ATOM    128  C   TYR    94       0.099   4.944   2.974  1.00  0.00
ATOM    129  N   TRP    95      -0.468   4.885   1.782  1.00  0.00
ATOM    130  CA  TRP    95      -1.836   4.526   1.627  1.00  0.00
ATOM    131  CB  TRP    95      -2.208   4.466   0.144  1.00  0.00
ATOM    132  CG  TRP    95      -3.661   4.195  -0.099  1.00  0.00
ATOM    133  CD1 TRP    95      -4.207   3.065  -0.636  1.00  0.00
ATOM    134  CD2 TRP    95      -4.757   5.073   0.186  1.00  0.00
ATOM    135  CE2 TRP    95      -5.937   4.409  -0.203  1.00  0.00
ATOM    136  CE3 TRP    95      -4.856   6.356   0.733  1.00  0.00
ATOM    137  NE1 TRP    95      -5.573   3.183  -0.703  1.00  0.00
ATOM    138  CZ2 TRP    95      -7.199   4.984  -0.064  1.00  0.00
ATOM    139  CZ3 TRP    95      -6.110   6.922   0.869  1.00  0.00
ATOM    140  CH2 TRP    95      -7.265   6.240   0.473  1.00  0.00
ATOM    141  O   TRP    95      -3.200   2.954   2.716  1.00  0.00
ATOM    142  C   TRP    95      -2.123   3.179   2.233  1.00  0.00
ATOM    143  N   HIS    96      -1.165   2.274   2.241  1.00  0.00
ATOM    144  CA  HIS    96      -1.396   0.972   2.841  1.00  0.00
ATOM    145  CB  HIS    96      -0.246   0.018   2.511  1.00  0.00
ATOM    146  CG  HIS    96      -0.374  -1.328   3.154  1.00  0.00
ATOM    147  CD2 HIS    96       0.258  -2.008   4.275  1.00  0.00
ATOM    148  ND1 HIS    96      -1.258  -2.284   2.707  1.00  0.00
ATOM    149  CE1 HIS    96      -1.145  -3.380   3.479  1.00  0.00
ATOM    150  NE2 HIS    96      -0.237  -3.221   4.421  1.00  0.00
ATOM    151  O   HIS    96      -2.480   0.828   4.948  1.00  0.00
ATOM    152  C   HIS    96      -1.481   1.213   4.333  1.00  0.00
ATOM    153  N   TYR    97      -0.448   1.836   4.925  1.00  0.00
ATOM    154  CA  TYR    97      -0.516   2.128   6.368  1.00  0.00
ATOM    155  CB  TYR    97       0.644   3.031   6.788  1.00  0.00
ATOM    156  CG  TYR    97       0.684   3.332   8.269  1.00  0.00
ATOM    157  CD1 TYR    97       1.198   2.407   9.169  1.00  0.00
ATOM    158  CD2 TYR    97       0.205   4.538   8.763  1.00  0.00
ATOM    159  CE1 TYR    97       1.236   2.673  10.525  1.00  0.00
ATOM    160  CE2 TYR    97       0.236   4.821  10.115  1.00  0.00
ATOM    161  CZ  TYR    97       0.758   3.876  10.997  1.00  0.00
ATOM    162  OH  TYR    97       0.795   4.143  12.346  1.00  0.00
ATOM    163  O   TYR    97      -2.752   2.253   7.160  1.00  0.00
ATOM    164  C   TYR    97      -1.857   2.833   6.611  1.00  0.00
ATOM    165  N   LEU    98      -1.994   4.069   6.160  1.00  0.00
ATOM    166  CA  LEU    98      -3.200   4.858   6.322  1.00  0.00
ATOM    167  CB  LEU    98      -3.289   5.929   5.234  1.00  0.00
ATOM    168  CG  LEU    98      -4.440   6.928   5.359  1.00  0.00
ATOM    169  CD1 LEU    98      -4.332   7.717   6.656  1.00  0.00
ATOM    170  CD2 LEU    98      -4.426   7.914   4.200  1.00  0.00
ATOM    171  O   LEU    98      -5.574   4.734   6.841  1.00  0.00
ATOM    172  C   LEU    98      -4.596   4.215   6.270  1.00  0.00
ATOM    173  N   ASN    99      -4.728   3.102   5.570  1.00  0.00
ATOM    174  CA  ASN    99      -6.045   2.485   5.461  1.00  0.00
ATOM    175  CB  ASN    99      -5.981   1.237   4.578  1.00  0.00
ATOM    176  CG  ASN    99      -5.825   1.571   3.107  1.00  0.00
ATOM    177  ND2 ASN    99      -5.371   0.597   2.326  1.00  0.00
ATOM    178  OD1 ASN    99      -6.111   2.690   2.682  1.00  0.00
ATOM    179  O   ASN    99      -7.934   1.730   6.789  1.00  0.00
ATOM    180  C   ASN    99      -6.711   2.012   6.766  1.00  0.00
ATOM    181  N   GLU   100      -5.917   1.923   7.838  1.00  0.00
ATOM    182  CA  GLU   100      -6.378   1.450   9.144  1.00  0.00
ATOM    183  CB  GLU   100      -5.190   1.020  10.008  1.00  0.00
ATOM    184  CG  GLU   100      -4.448  -0.197   9.481  1.00  0.00
ATOM    185  CD  GLU   100      -3.266  -0.579  10.352  1.00  0.00
ATOM    186  OE1 GLU   100      -3.057   0.078  11.393  1.00  0.00
ATOM    187  OE2 GLU   100      -2.549  -1.536   9.991  1.00  0.00
ATOM    188  O   GLU   100      -7.828   2.221  10.812  1.00  0.00
ATOM    189  C   GLU   100      -7.114   2.512   9.865  1.00  0.00
ATOM    190  N   GLN   101      -6.944   3.751   9.432  1.00  0.00
ATOM    191  CA  GLN   101      -7.640   4.851  10.054  1.00  0.00
ATOM    192  CB  GLN   101      -6.926   6.172   9.756  1.00  0.00
ATOM    193  CG  GLN   101      -7.554   7.380  10.430  1.00  0.00
ATOM    194  CD  GLN   101      -6.838   8.674  10.092  1.00  0.00
ATOM    195  OE1 GLN   101      -5.760   8.660   9.497  1.00  0.00
ATOM    196  NE2 GLN   101      -7.435   9.797  10.473  1.00  0.00
ATOM    197  O   GLN   101      -9.227   5.251   8.349  1.00  0.00
ATOM    198  C   GLN   101      -9.031   4.838   9.454  1.00  0.00
ATOM    199  N   ASP   102     -10.021   4.398  10.216  1.00  0.00
ATOM    200  CA  ASP   102     -11.402   4.325   9.757  1.00  0.00
ATOM    201  CB  ASP   102     -12.354   4.163  10.944  1.00  0.00
ATOM    202  CG  ASP   102     -13.781   3.895  10.514  1.00  0.00
ATOM    203  OD1 ASP   102     -14.035   3.849   9.292  1.00  0.00
ATOM    204  OD2 ASP   102     -14.649   3.732  11.398  1.00  0.00
ATOM    205  O   ASP   102     -12.846   5.484   8.255  1.00  0.00
ATOM    206  C   ASP   102     -11.863   5.541   9.002  1.00  0.00
ATOM    210  N   ALA   108      -5.891  14.261  -1.091  1.00  0.00
ATOM    211  CA  ALA   108      -4.805  14.866  -1.876  1.00  0.00
ATOM    212  CB  ALA   108      -4.047  15.883  -1.036  1.00  0.00
ATOM    213  O   ALA   108      -3.428  13.747  -3.516  1.00  0.00
ATOM    214  C   ALA   108      -3.805  13.782  -2.352  1.00  0.00
ATOM    215  N   ASP   109      -3.414  12.879  -1.455  1.00  0.00
ATOM    216  CA  ASP   109      -2.514  11.827  -1.828  1.00  0.00
ATOM    217  CB  ASP   109      -2.193  10.943  -0.621  1.00  0.00
ATOM    218  CG  ASP   109      -1.271  11.627   0.372  1.00  0.00
ATOM    219  OD1 ASP   109      -0.698  12.679   0.023  1.00  0.00
ATOM    220  OD2 ASP   109      -1.124  11.108   1.498  1.00  0.00
ATOM    221  O   ASP   109      -2.337  10.423  -3.758  1.00  0.00
ATOM    222  C   ASP   109      -3.085  10.918  -2.914  1.00  0.00
ATOM    223  N   ASP   110      -4.389  10.677  -2.911  1.00  0.00
ATOM    224  CA  ASP   110      -4.942   9.812  -3.945  1.00  0.00
ATOM    225  CB  ASP   110      -6.349   9.350  -3.560  1.00  0.00
ATOM    226  CG  ASP   110      -6.344   8.343  -2.429  1.00  0.00
ATOM    227  OD1 ASP   110      -5.260   7.807  -2.117  1.00  0.00
ATOM    228  OD2 ASP   110      -7.423   8.091  -1.853  1.00  0.00
ATOM    229  O   ASP   110      -5.011  10.052  -6.346  1.00  0.00
ATOM    230  C   ASP   110      -5.006  10.582  -5.240  1.00  0.00
ATOM    231  N   ILE   111      -4.996  11.883  -5.081  1.00  0.00
ATOM    232  CA  ILE   111      -5.018  12.730  -6.229  1.00  0.00
ATOM    233  CB  ILE   111      -5.377  14.179  -5.855  1.00  0.00
ATOM    234  CG1 ILE   111      -6.797  14.247  -5.287  1.00  0.00
ATOM    235  CG2 ILE   111      -5.306  15.079  -7.079  1.00  0.00
ATOM    236  CD1 ILE   111      -7.152  15.591  -4.690  1.00  0.00
ATOM    237  O   ILE   111      -3.462  12.386  -8.043  1.00  0.00
ATOM    238  C   ILE   111      -3.631  12.696  -6.850  1.00  0.00
ATOM    239  N   THR   112      -2.645  13.033  -6.022  1.00  0.00
ATOM    240  CA  THR   112      -1.264  13.034  -6.441  1.00  0.00
ATOM    241  CB  THR   112      -0.315  13.294  -5.258  1.00  0.00
ATOM    242  CG2 THR   112       1.134  13.269  -5.720  1.00  0.00
ATOM    243  OG1 THR   112      -0.598  14.580  -4.690  1.00  0.00
ATOM    244  O   THR   112      -0.329  11.635  -8.129  1.00  0.00
ATOM    245  C   THR   112      -0.914  11.690  -7.045  1.00  0.00
ATOM    246  N   TRP   113      -1.330  10.610  -6.384  1.00  0.00
ATOM    247  CA  TRP   113      -1.057   9.276  -6.893  1.00  0.00
ATOM    248  CB  TRP   113      -1.612   8.215  -5.941  1.00  0.00
ATOM    249  CG  TRP   113      -1.406   6.812  -6.421  1.00  0.00
ATOM    250  CD1 TRP   113      -2.352   5.976  -6.939  1.00  0.00
ATOM    251  CD2 TRP   113      -0.173   6.079  -6.427  1.00  0.00
ATOM    252  CE2 TRP   113      -0.449   4.805  -6.965  1.00  0.00
ATOM    253  CE3 TRP   113       1.134   6.375  -6.033  1.00  0.00
ATOM    254  NE1 TRP   113      -1.787   4.767  -7.269  1.00  0.00
ATOM    255  CZ2 TRP   113       0.535   3.830  -7.116  1.00  0.00
ATOM    256  CZ3 TRP   113       2.106   5.404  -6.184  1.00  0.00
ATOM    257  CH2 TRP   113       1.805   4.148  -6.721  1.00  0.00
ATOM    258  O   TRP   113      -0.975   8.528  -9.186  1.00  0.00
ATOM    259  C   TRP   113      -1.669   8.996  -8.260  1.00  0.00
ATOM    260  N   ASP   114      -2.961   9.261  -8.407  1.00  0.00
ATOM    261  CA  ASP   114      -3.549   9.070  -9.714  1.00  0.00
ATOM    262  CB  ASP   114      -4.994   9.570  -9.730  1.00  0.00
ATOM    263  CG  ASP   114      -5.935   8.661  -8.964  1.00  0.00
ATOM    264  OD1 ASP   114      -5.519   7.536  -8.614  1.00  0.00
ATOM    265  OD2 ASP   114      -7.087   9.072  -8.713  1.00  0.00
ATOM    266  O   ASP   114      -2.446   9.351 -11.865  1.00  0.00
ATOM    267  C   ASP   114      -2.743   9.851 -10.776  1.00  0.00
ATOM    268  N   PHE   115      -2.333  11.073 -10.458  1.00  0.00
ATOM    269  CA  PHE   115      -1.613  11.847 -11.468  1.00  0.00
ATOM    270  CB  PHE   115      -1.372  13.275 -10.976  1.00  0.00
ATOM    271  CG  PHE   115      -0.650  14.143 -11.967  1.00  0.00
ATOM    272  CD1 PHE   115      -1.317  14.682 -13.053  1.00  0.00
ATOM    273  CD2 PHE   115       0.698  14.421 -11.813  1.00  0.00
ATOM    274  CE1 PHE   115      -0.652  15.480 -13.965  1.00  0.00
ATOM    275  CE2 PHE   115       1.363  15.218 -12.724  1.00  0.00
ATOM    276  CZ  PHE   115       0.694  15.748 -13.797  1.00  0.00
ATOM    277  O   PHE   115       0.157  11.215 -12.917  1.00  0.00
ATOM    278  C   PHE   115      -0.276  11.230 -11.778  1.00  0.00
ATOM    279  N   ILE   116       0.373  10.726 -10.745  1.00  0.00
ATOM    280  CA  ILE   116       1.657  10.055 -10.879  1.00  0.00
ATOM    281  CB  ILE   116       2.181   9.560  -9.519  1.00  0.00
ATOM    282  CG1 ILE   116       2.523  10.748  -8.616  1.00  0.00
ATOM    283  CG2 ILE   116       3.435   8.720  -9.704  1.00  0.00
ATOM    284  CD1 ILE   116       2.764  10.366  -7.171  1.00  0.00
ATOM    285  O   ILE   116       2.074   8.787 -12.846  1.00  0.00
ATOM    286  C   ILE   116       1.424   8.863 -11.819  1.00  0.00
ATOM    287  N   SER   117       0.487   7.966 -11.495  1.00  0.00
ATOM    288  CA  SER   117       0.189   6.829 -12.365  1.00  0.00
ATOM    289  CB  SER   117      -1.070   6.103 -11.885  1.00  0.00
ATOM    290  OG  SER   117      -0.853   5.484 -10.629  1.00  0.00
ATOM    291  O   SER   117       0.546   6.812 -14.759  1.00  0.00
ATOM    292  C   SER   117      -0.047   7.313 -13.820  1.00  0.00
ATOM    293  N   ASN   118      -0.953   8.262 -14.012  1.00  0.00
ATOM    294  CA  ASN   118      -1.233   8.750 -15.348  1.00  0.00
ATOM    295  CB  ASN   118      -2.267   9.877 -15.300  1.00  0.00
ATOM    296  CG  ASN   118      -3.663   9.373 -14.993  1.00  0.00
ATOM    297  ND2 ASN   118      -4.529  10.273 -14.544  1.00  0.00
ATOM    298  OD1 ASN   118      -3.958   8.189 -15.157  1.00  0.00
ATOM    299  O   ASN   118       0.319   8.921 -17.085  1.00  0.00
ATOM    300  C   ASN   118       0.027   9.283 -15.988  1.00  0.00
ATOM    301  N   VAL   119       0.799  10.111 -15.315  1.00  0.00
ATOM    302  CA  VAL   119       2.016  10.622 -15.935  1.00  0.00
ATOM    303  CB  VAL   119       2.789  11.552 -14.980  1.00  0.00
ATOM    304  CG1 VAL   119       4.144  11.912 -15.568  1.00  0.00
ATOM    305  CG2 VAL   119       2.011  12.836 -14.742  1.00  0.00
ATOM    306  O   VAL   119       3.616   9.565 -17.435  1.00  0.00
ATOM    307  C   VAL   119       2.992   9.508 -16.349  1.00  0.00
ATOM    308  N   ASN   120       3.145   8.514 -15.485  1.00  0.00
ATOM    309  CA  ASN   120       4.027   7.389 -15.795  1.00  0.00
ATOM    310  CB  ASN   120       4.069   6.402 -14.627  1.00  0.00
ATOM    311  CG  ASN   120       5.082   5.295 -14.835  1.00  0.00
ATOM    312  ND2 ASN   120       4.599   4.060 -14.914  1.00  0.00
ATOM    313  OD1 ASN   120       6.284   5.547 -14.924  1.00  0.00
ATOM    314  O   ASN   120       4.349   6.322 -17.937  1.00  0.00
ATOM    315  C   ASN   120       3.545   6.641 -17.029  1.00  0.00
ATOM    316  N   SER   121       2.242   6.379 -17.107  1.00  0.00
ATOM    317  CA  SER   121       1.751   5.667 -18.279  1.00  0.00
ATOM    318  CB  SER   121       0.229   5.528 -18.221  1.00  0.00
ATOM    319  OG  SER   121      -0.167   4.689 -17.150  1.00  0.00
ATOM    320  O   SER   121       2.834   5.935 -20.394  1.00  0.00
ATOM    321  C   SER   121       2.133   6.442 -19.534  1.00  0.00
ATOM    322  N   ILE   122       1.735   7.697 -19.600  1.00  0.00
ATOM    323  CA  ILE   122       2.063   8.503 -20.745  1.00  0.00
ATOM    324  CB  ILE   122       1.632   9.968 -20.545  1.00  0.00
ATOM    325  CG1 ILE   122       0.111  10.064 -20.412  1.00  0.00
ATOM    326  CG2 ILE   122       2.067  10.817 -21.729  1.00  0.00
ATOM    327  CD1 ILE   122      -0.380  11.429 -19.984  1.00  0.00
ATOM    328  O   ILE   122       3.883   8.664 -22.221  1.00  0.00
ATOM    329  C   ILE   122       3.543   8.543 -21.069  1.00  0.00
ATOM    333  N   ASP   139       2.295   9.782  13.809  1.00  0.00
ATOM    334  CA  ASP   139       3.652   9.649  13.324  1.00  0.00
ATOM    335  CB  ASP   139       4.310   8.396  13.906  1.00  0.00
ATOM    336  CG  ASP   139       4.644   8.545  15.377  1.00  0.00
ATOM    337  OD1 ASP   139       4.592   9.683  15.887  1.00  0.00
ATOM    338  OD2 ASP   139       4.961   7.521  16.020  1.00  0.00
ATOM    339  O   ASP   139       4.091  10.321  11.054  1.00  0.00
ATOM    340  C   ASP   139       3.502   9.551  11.811  1.00  0.00
ATOM    341  N   PHE   140       2.663   8.625  11.372  1.00  0.00
ATOM    342  CA  PHE   140       2.493   8.438   9.953  1.00  0.00
ATOM    343  CB  PHE   140       1.692   7.164   9.673  1.00  0.00
ATOM    344  CG  PHE   140       2.477   5.899   9.866  1.00  0.00
ATOM    345  CD1 PHE   140       2.307   5.128  11.002  1.00  0.00
ATOM    346  CD2 PHE   140       3.386   5.479   8.909  1.00  0.00
ATOM    347  CE1 PHE   140       3.030   3.964  11.178  1.00  0.00
ATOM    348  CE2 PHE   140       4.110   4.316   9.087  1.00  0.00
ATOM    349  CZ  PHE   140       3.935   3.558  10.216  1.00  0.00
ATOM    350  O   PHE   140       1.987   9.844   8.074  1.00  0.00
ATOM    351  C   PHE   140       1.751   9.579   9.249  1.00  0.00
ATOM    352  N   ALA   141       0.874  10.277   9.950  1.00  0.00
ATOM    353  CA  ALA   141       0.203  11.383   9.300  1.00  0.00
ATOM    354  CB  ALA   141      -0.920  11.911  10.181  1.00  0.00
ATOM    355  O   ALA   141       1.010  13.328   8.099  1.00  0.00
ATOM    356  C   ALA   141       1.198  12.528   9.033  1.00  0.00
ATOM    357  N   VAL   142       2.260  12.609   9.837  1.00  0.00
ATOM    358  CA  VAL   142       3.298  13.634   9.641  1.00  0.00
ATOM    359  CB  VAL   142       4.238  13.725  10.857  1.00  0.00
ATOM    360  CG1 VAL   142       5.407  14.650  10.559  1.00  0.00
ATOM    361  CG2 VAL   142       3.491  14.267  12.067  1.00  0.00
ATOM    362  O   VAL   142       4.340  14.082   7.507  1.00  0.00
ATOM    363  C   VAL   142       4.123  13.256   8.395  1.00  0.00
ATOM    364  N   TRP   143       4.565  12.004   8.326  1.00  0.00
ATOM    365  CA  TRP   143       5.380  11.532   7.218  1.00  0.00
ATOM    366  CB  TRP   143       5.616  10.025   7.331  1.00  0.00
ATOM    367  CG  TRP   143       6.491   9.473   6.248  1.00  0.00
ATOM    368  CD1 TRP   143       6.106   8.667   5.214  1.00  0.00
ATOM    369  CD2 TRP   143       7.899   9.684   6.088  1.00  0.00
ATOM    370  CE2 TRP   143       8.299   8.976   4.937  1.00  0.00
ATOM    371  CE3 TRP   143       8.860  10.402   6.806  1.00  0.00
ATOM    372  NE1 TRP   143       7.186   8.363   4.421  1.00  0.00
ATOM    373  CZ2 TRP   143       9.619   8.967   4.488  1.00  0.00
ATOM    374  CZ3 TRP   143      10.168  10.390   6.357  1.00  0.00
ATOM    375  CH2 TRP   143      10.538   9.678   5.211  1.00  0.00
ATOM    376  O   TRP   143       5.295  12.045   4.837  1.00  0.00
ATOM    377  C   TRP   143       4.670  11.822   5.887  1.00  0.00
ATOM    378  N   SER   144       3.346  11.832   5.954  1.00  0.00
ATOM    379  CA  SER   144       2.489  12.092   4.801  1.00  0.00
ATOM    380  CB  SER   144       1.058  11.628   5.082  1.00  0.00
ATOM    381  OG  SER   144       0.212  11.881   3.973  1.00  0.00
ATOM    382  O   SER   144       2.435  13.966   3.298  1.00  0.00
ATOM    383  C   SER   144       2.448  13.588   4.472  1.00  0.00
ATOM    384  N   GLU   145       2.390  14.423   5.505  1.00  0.00
ATOM    385  CA  GLU   145       2.357  15.864   5.310  1.00  0.00
ATOM    386  CB  GLU   145       2.306  16.585   6.658  1.00  0.00
ATOM    387  CG  GLU   145       2.221  18.099   6.549  1.00  0.00
ATOM    388  CD  GLU   145       2.139  18.778   7.902  1.00  0.00
ATOM    389  OE1 GLU   145       2.133  18.062   8.926  1.00  0.00
ATOM    390  OE2 GLU   145       2.079  20.024   7.939  1.00  0.00
ATOM    391  O   GLU   145       3.574  16.973   3.567  1.00  0.00
ATOM    392  C   GLU   145       3.605  16.246   4.571  1.00  0.00
ATOM    393  N   ALA   146       4.710  15.744   5.088  1.00  0.00
ATOM    394  CA  ALA   146       5.992  16.006   4.498  1.00  0.00
ATOM    395  CB  ALA   146       7.071  15.188   5.189  1.00  0.00
ATOM    396  O   ALA   146       6.705  16.383   2.233  1.00  0.00
ATOM    397  C   ALA   146       6.087  15.673   3.010  1.00  0.00
ATOM    398  N   ARG   147       5.452  14.587   2.624  1.00  0.00
ATOM    399  CA  ARG   147       5.506  14.104   1.275  1.00  0.00
ATOM    400  CB  ARG   147       5.069  12.639   1.213  1.00  0.00
ATOM    401  CG  ARG   147       5.161  12.022  -0.174  1.00  0.00
ATOM    402  CD  ARG   147       4.696  10.575  -0.167  1.00  0.00
ATOM    403  NE  ARG   147       3.264  10.461   0.097  1.00  0.00
ATOM    404  CZ  ARG   147       2.650   9.325   0.409  1.00  0.00
ATOM    405  NH1 ARG   147       1.343   9.317   0.632  1.00  0.00
ATOM    406  NH2 ARG   147       3.344   8.199   0.498  1.00  0.00
ATOM    407  O   ARG   147       5.013  15.018  -0.908  1.00  0.00
ATOM    408  C   ARG   147       4.629  14.834   0.273  1.00  0.00
ATOM    409  N   PHE   148       3.426  15.188   0.734  1.00  0.00
ATOM    410  CA  PHE   148       2.467  15.897  -0.093  1.00  0.00
ATOM    411  CB  PHE   148       1.195  16.204   0.703  1.00  0.00
ATOM    412  CG  PHE   148       0.152  16.944  -0.083  1.00  0.00
ATOM    413  CD1 PHE   148      -0.662  16.277  -0.981  1.00  0.00
ATOM    414  CD2 PHE   148      -0.015  18.309   0.076  1.00  0.00
ATOM    415  CE1 PHE   148      -1.622  16.960  -1.705  1.00  0.00
ATOM    416  CE2 PHE   148      -0.976  18.992  -0.647  1.00  0.00
ATOM    417  CZ  PHE   148      -1.777  18.322  -1.535  1.00  0.00
ATOM    418  O   PHE   148       3.069  17.601  -1.652  1.00  0.00
ATOM    419  C   PHE   148       3.172  17.159  -0.503  1.00  0.00
ATOM    420  N   THR   154       3.912  17.722   0.431  1.00  0.00
ATOM    421  CA  THR   154       4.647  18.951   0.180  1.00  0.00
ATOM    422  CB  THR   154       5.272  19.509   1.472  1.00  0.00
ATOM    423  CG2 THR   154       6.071  20.769   1.176  1.00  0.00
ATOM    424  OG1 THR   154       4.235  19.827   2.409  1.00  0.00
ATOM    425  O   THR   154       5.898  19.420  -1.826  1.00  0.00
ATOM    426  C   THR   154       5.786  18.742  -0.815  1.00  0.00
ATOM    427  N   ALA   155       6.614  17.758  -0.554  1.00  0.00
ATOM    428  CA  ALA   155       7.778  17.533  -1.390  1.00  0.00
ATOM    429  CB  ALA   155       8.590  16.359  -0.866  1.00  0.00
ATOM    430  O   ALA   155       8.161  17.576  -3.754  1.00  0.00
ATOM    431  C   ALA   155       7.440  17.224  -2.822  1.00  0.00
ATOM    432  N   LEU   156       6.322  16.572  -3.007  1.00  0.00
ATOM    433  CA  LEU   156       5.914  16.233  -4.344  1.00  0.00
ATOM    434  CB  LEU   156       4.895  15.093  -4.320  1.00  0.00
ATOM    435  CG  LEU   156       5.399  13.743  -3.804  1.00  0.00
ATOM    436  CD1 LEU   156       4.262  12.735  -3.739  1.00  0.00
ATOM    437  CD2 LEU   156       6.475  13.186  -4.724  1.00  0.00
ATOM    438  O   LEU   156       5.407  17.593  -6.234  1.00  0.00
ATOM    439  C   LEU   156       5.278  17.424  -5.033  1.00  0.00
ATOM    440  N   THR   157       4.591  18.276  -4.291  1.00  0.00
ATOM    441  CA  THR   157       3.912  19.388  -4.947  1.00  0.00
ATOM    442  CB  THR   157       3.152  20.263  -3.933  1.00  0.00
ATOM    443  CG2 THR   157       2.485  21.437  -4.634  1.00  0.00
ATOM    444  OG1 THR   157       2.145  19.480  -3.281  1.00  0.00
ATOM    445  O   THR   157       4.805  20.656  -6.799  1.00  0.00
ATOM    446  C   THR   157       4.967  20.232  -5.648  1.00  0.00
ATOM    447  N   LEU   158       6.062  20.442  -4.930  1.00  0.00
ATOM    448  CA  LEU   158       7.181  21.228  -5.384  1.00  0.00
ATOM    449  CB  LEU   158       8.278  21.262  -4.319  1.00  0.00
ATOM    450  CG  LEU   158       7.965  22.052  -3.048  1.00  0.00
ATOM    451  CD1 LEU   158       9.058  21.855  -2.008  1.00  0.00
ATOM    452  CD2 LEU   158       7.859  23.539  -3.349  1.00  0.00
ATOM    453  O   LEU   158       8.096  21.335  -7.580  1.00  0.00
ATOM    454  C   LEU   158       7.745  20.627  -6.646  1.00  0.00
ATOM    455  N   ALA   159       7.836  19.305  -6.659  1.00  0.00
ATOM    456  CA  ALA   159       8.314  18.585  -7.823  1.00  0.00
ATOM    457  CB  ALA   159       8.710  17.167  -7.443  1.00  0.00
ATOM    458  O   ALA   159       7.661  18.516 -10.154  1.00  0.00
ATOM    459  C   ALA   159       7.275  18.449  -8.990  1.00  0.00
ATOM    460  N   VAL   160       5.988  18.197  -8.709  1.00  0.00
ATOM    461  CA  VAL   160       5.006  18.122  -9.812  1.00  0.00
ATOM    462  CB  VAL   160       3.588  17.832  -9.285  1.00  0.00
ATOM    463  CG1 VAL   160       2.568  17.955 -10.406  1.00  0.00
ATOM    464  CG2 VAL   160       3.509  16.424  -8.716  1.00  0.00
ATOM    465  O   VAL   160       4.995  19.590 -11.706  1.00  0.00
ATOM    466  C   VAL   160       5.064  19.490 -10.486  1.00  0.00
ATOM    467  N   THR   161       5.233  20.544  -9.683  1.00  0.00
ATOM    468  CA  THR   161       5.320  21.874 -10.259  1.00  0.00
ATOM    469  CB  THR   161       5.657  22.931  -9.192  1.00  0.00
ATOM    470  CG2 THR   161       5.752  24.312  -9.821  1.00  0.00
ATOM    471  OG1 THR   161       4.632  22.947  -8.190  1.00  0.00
ATOM    472  O   THR   161       6.116  22.359 -12.446  1.00  0.00
ATOM    473  C   THR   161       6.397  21.944 -11.325  1.00  0.00
ATOM    474  N   THR   162       7.618  21.566 -10.962  1.00  0.00
ATOM    475  CA  THR   162       8.701  21.550 -11.919  1.00  0.00
ATOM    476  CB  THR   162       9.957  20.875 -11.337  1.00  0.00
ATOM    477  CG2 THR   162      11.075  20.850 -12.370  1.00  0.00
ATOM    478  OG1 THR   162      10.405  21.603 -10.187  1.00  0.00
ATOM    479  O   THR   162       8.367  21.295 -14.315  1.00  0.00
ATOM    480  C   THR   162       8.282  20.768 -13.192  1.00  0.00
ATOM    481  N   THR   163       7.839  19.519 -13.004  1.00  0.00
ATOM    482  CA  THR   163       7.411  18.642 -14.080  1.00  0.00
ATOM    483  CB  THR   163       6.765  17.355 -13.536  1.00  0.00
ATOM    484  CG2 THR   163       6.307  16.465 -14.680  1.00  0.00
ATOM    485  OG1 THR   163       7.718  16.638 -12.742  1.00  0.00
ATOM    486  O   THR   163       6.572  19.585 -16.071  1.00  0.00
ATOM    487  C   THR   163       6.421  19.437 -14.868  1.00  0.00
ATOM    488  N   LEU   164       5.444  20.031 -14.193  1.00  0.00
ATOM    489  CA  LEU   164       4.464  20.826 -14.923  1.00  0.00
ATOM    490  CB  LEU   164       3.439  21.429 -13.961  1.00  0.00
ATOM    491  CG  LEU   164       2.483  20.446 -13.284  1.00  0.00
ATOM    492  CD1 LEU   164       1.637  21.153 -12.236  1.00  0.00
ATOM    493  CD2 LEU   164       1.548  19.817 -14.305  1.00  0.00
ATOM    494  O   LEU   164       4.582  22.358 -16.751  1.00  0.00
ATOM    495  C   LEU   164       5.067  21.989 -15.702  1.00  0.00
ATOM    496  N   LYS   165       6.105  22.594 -15.189  1.00  0.00
ATOM    497  CA  LYS   165       6.713  23.675 -15.918  1.00  0.00
ATOM    498  CB  LYS   165       7.781  24.364 -15.065  1.00  0.00
ATOM    499  CG  LYS   165       7.230  25.095 -13.853  1.00  0.00
ATOM    500  CD  LYS   165       8.334  25.814 -13.094  1.00  0.00
ATOM    501  CE  LYS   165       7.788  26.530 -11.869  1.00  0.00
ATOM    502  NZ  LYS   165       8.862  27.215 -11.100  1.00  0.00
ATOM    503  O   LYS   165       7.186  23.694 -18.256  1.00  0.00
ATOM    504  C   LYS   165       7.363  23.113 -17.185  1.00  0.00
TER
END



